Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:36:52 (240049): wrapper (7.7.26015): starting
08:36:52 (240049): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:36:52] Arguments: --nthreads 8
[2025-06-04 08:36:52] Threads: 8
[2025-06-04 08:36:52] Checking for CVMFS
[2025-06-04 08:36:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:36:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:36:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:36:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:36:52] 2.11.2.0 7082 28791 202412 146780 3 229 18258828 18432000 9944 130560 0 120266549 99.591 100161541 30859 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 08:36:52] CVMFS is ok
[2025-06-04 08:36:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:36:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:36:52] Further information can be found at the LHC@home message board.
[2025-06-04 08:36:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:36:52] Checking for apptainer binary...
[2025-06-04 08:36:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:36:52] Running /usr/bin/apptainer --version
[2025-06-04 08:36:52] apptainer version 1.3.2-1.el7
[2025-06-04 08:36:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:36:53] c-211-35-3.aglt2.org
[2025-06-04 08:36:53] apptainer works
[2025-06-04 08:36:53] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:36:53] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:36:53] Starting ATLAS job with PandaID=6678778845
[2025-06-04 08:36:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:44:13]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:44:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 09:44:13]  is_altstaged=None
[2025-06-04 09:44:13]  is_tar=False
[2025-06-04 09:44:13]  lfn=log.45006595._055580.job.log.tgz.1
[2025-06-04 09:44:13]  mtime=0
[2025-06-04 09:44:13]  protocol_id=None
[2025-06-04 09:44:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:44:13]  replicas=None
[2025-06-04 09:44:13]  scope=mc23_13p6TeV
[2025-06-04 09:44:13]  status=None
[2025-06-04 09:44:13]  status_code=0
[2025-06-04 09:44:13]  storage_token=
[2025-06-04 09:44:13]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6678778845/log.45006595._055580.job.log.tgz.1
[2025-06-04 09:44:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/87/log.45006595._055580.job.log.tgz.1
[2025-06-04 09:44:13]  workdir=None
[2025-06-04 09:44:13] ]
[2025-06-04 09:44:13] 2025-06-04 13:43:52,999 | INFO     | transferring file log.45006595._055580.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6678778845/log.45006595._055580.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:44:13] 2025-06-04 13:43:52,999 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6678778845/log.45006595._055580.job.log.tgz.1 /tmp/boinchome/slots/3/log.45006595._055580.job
[2025-06-04 09:44:13] 2025-06-04 13:43:53,017 | INFO     | adding to output.list: log.45006595._055580.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/87/log.45006595._055580.job.log.tg
[2025-06-04 09:44:13] 2025-06-04 13:43:53,018 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:44:13] 2025-06-04 13:43:53,018 | INFO     | summary of transferred files:
[2025-06-04 09:44:13] 2025-06-04 13:43:53,018 | INFO     |  -- lfn=log.45006595._055580.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:44:13] 2025-06-04 13:43:53,018 | INFO     | stage-out finished correctly
[2025-06-04 09:44:13] 2025-06-04 13:43:54,449 | WARNING  | process 250248 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:44:13] 2025-06-04 13:43:54,449 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6678778845/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:44:13] 2025-06-04 13:43:54,702 | INFO     | number of running child processes to parent process 250248: 1
[2025-06-04 09:44:13] 2025-06-04 13:43:54,702 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:44:13] 2025-06-04 13:43:55,618 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:44:13] 2025-06-04 13:43:56,978 | INFO     | job 6678778845 has state=finished
[2025-06-04 09:44:13] 2025-06-04 13:43:56,978 | INFO     | preparing for final server update for job 6678778845 in state='finished'
[2025-06-04 09:44:13] 2025-06-04 13:43:56,978 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:44:13] 2025-06-04 13:43:56,978 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:44:13] 2025-06-04 13:43:56,978 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:44:13] 2025-06-04 13:43:56,979 | INFO     | job 6678778845 has finished - writing final server update
[2025-06-04 09:44:13] 2025-06-04 13:43:56,979 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:44:13] 2025-06-04 13:43:56,982 | INFO     | executing command: lscpu
[2025-06-04 09:44:13] 2025-06-04 13:43:57,024 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:44:13] 2025-06-04 13:43:57,209 | INFO     | monitor loop #301: job 0:6678778845 is in state 'finished'
[2025-06-04 09:44:13] 2025-06-04 13:43:57,209 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:44:13] 2025-06-04 13:43:59,712 | INFO     | monitor loop #302: job 0:6678778845 is in state 'finished'
[2025-06-04 09:44:13] 2025-06-04 13:43:59,712 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:44:13] 2025-06-04 13:44:00,550 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:44:13] 2025-06-04 13:44:00,550 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6678778845/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:44:13] 2025-06-04 13:44:00,551 | INFO     | extracted standard info from prmon json
[2025-06-04 09:44:13] 2025-06-04 13:44:00,551 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:44:13] 2025-06-04 13:44:00,551 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:44:13] 2025-06-04 13:44:00,551 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:44:13] 2025-06-04 13:44:00,551 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:44:13] 2025-06-04 13:44:00,552 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:44:13] 2025-06-04 13:44:00,552 | INFO     | sum of square deviations: 63666310.0
[2025-06-04 09:44:13] 2025-06-04 13:44:00,552 | INFO     | sum of deviations: -1379748935.0
[2025-06-04 09:44:13] 2025-06-04 13:44:00,553 | INFO     | mean x: 1749042718.0
[2025-06-04 09:44:13] 2025-06-04 13:44:00,553 | INFO     | mean y: 2507979.033898305
[2025-06-04 09:44:13] 2025-06-04 13:44:00,553 | INFO     | -- intersect: 37907010806.82469
[2025-06-04 09:44:13] 2025-06-04 13:44:00,553 | INFO     | intersect: 37907010806.82469
[2025-06-04 09:44:13] 2025-06-04 13:44:00,553 | INFO     | chi2: 0.0030091355136493757
[2025-06-04 09:44:13] 2025-06-04 13:44:00,553 | INFO     | -- intersect: 37907010806.82469
[2025-06-04 09:44:13] 2025-06-04 13:44:00,553 | INFO     | current memory leak: -21.67 B/s (using 59 data points, chi2=0.00)
[2025-06-04 09:44:13] 2025-06-04 13:44:00,553 | INFO     | ..............................
[2025-06-04 09:44:13] 2025-06-04 13:44:00,553 | INFO     | . Timing measurements:
[2025-06-04 09:44:13] 2025-06-04 13:44:00,553 | INFO     | . get job = 0 s
[2025-06-04 09:44:13] 2025-06-04 13:44:00,553 | INFO     | . initial setup = 2 s
[2025-06-04 09:44:13] 2025-06-04 13:44:00,553 | INFO     | . payload setup = 5 s
[2025-06-04 09:44:13] 2025-06-04 13:44:00,553 | INFO     | . stage-in = 0 s
[2025-06-04 09:44:13] 2025-06-04 13:44:00,553 | INFO     | . payload execution = 3988 s
[2025-06-04 09:44:13] 2025-06-04 13:44:00,554 | INFO     | . stage-out = 0 s
[2025-06-04 09:44:13] 2025-06-04 13:44:00,554 | INFO     | . log creation = 0 s
[2025-06-04 09:44:13] 2025-06-04 13:44:00,554 | INFO     | ..............................
[2025-06-04 09:44:13] 2025-06-04 13:44:00,605 | INFO     | 
[2025-06-04 09:44:13] 2025-06-04 13:44:00,605 | INFO     | job summary report
[2025-06-04 09:44:13] 2025-06-04 13:44:00,606 | INFO     | --------------------------------------------------
[2025-06-04 09:44:13] 2025-06-04 13:44:00,606 | INFO     | PanDA job id: 6678778845
[2025-06-04 09:44:13] 2025-06-04 13:44:00,606 | INFO     | task id: 45006595
[2025-06-04 09:44:13] 2025-06-04 13:44:00,606 | INFO     | errors: (none)
[2025-06-04 09:44:13] 2025-06-04 13:44:00,606 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:44:13] 2025-06-04 13:44:00,606 | INFO     | pilot state: finished 
[2025-06-04 09:44:13] 2025-06-04 13:44:00,606 | INFO     | transexitcode: 0
[2025-06-04 09:44:13] 2025-06-04 13:44:00,606 | INFO     | exeerrorcode: 0
[2025-06-04 09:44:13] 2025-06-04 13:44:00,606 | INFO     | exeerrordiag: 
[2025-06-04 09:44:13] 2025-06-04 13:44:00,606 | INFO     | exitcode: 0
[2025-06-04 09:44:13] 2025-06-04 13:44:00,606 | INFO     | exitmsg: OK
[2025-06-04 09:44:13] 2025-06-04 13:44:00,606 | INFO     | cpuconsumptiontime: 30131 s
[2025-06-04 09:44:13] 2025-06-04 13:44:00,606 | INFO     | nevents: 400
[2025-06-04 09:44:13] 2025-06-04 13:44:00,607 | INFO     | neventsw: 0
[2025-06-04 09:44:13] 2025-06-04 13:44:00,607 | INFO     | pid: 250248
[2025-06-04 09:44:13] 2025-06-04 13:44:00,607 | INFO     | pgrp: 250248
[2025-06-04 09:44:13] 2025-06-04 13:44:00,607 | INFO     | corecount: 8
[2025-06-04 09:44:13] 2025-06-04 13:44:00,607 | INFO     | event service: False
[2025-06-04 09:44:13] 2025-06-04 13:44:00,607 | INFO     | sizes: {0: 2397290, 3: 2397496, 11: 2397524, 3996: 2423372, 3997: 2432368, 4000: 2432368, 4005: 2432666}
[2025-06-04 09:44:13] 2025-06-04 13:44:00,607 | INFO     | --------------------------------------------------
[2025-06-04 09:44:13] 2025-06-04 13:44:00,607 | INFO     | 
[2025-06-04 09:44:13] 2025-06-04 13:44:00,607 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-04 09:44:13] 2025-06-04 13:44:00,630 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:44:13] 2025-06-04 13:44:00,630 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:44:13] 2025-06-04 13:44:00,630 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:44:13] 2025-06-04 13:44:00,630 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:44:13] 2025-06-04 13:44:00,630 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:44:13] 2025-06-04 13:44:00,630 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:44:13] 2025-06-04 13:44:00,631 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:44:13] 2025-06-04 13:44:00,631 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:44:13] 2025-06-04 13:44:00,631 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:44:13] 2025-06-04 13:44:00,631 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:44:13] 2025-06-04 13:44:00,631 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:44:13] 2025-06-04 13:44:00,631 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:44:13] 2025-06-04 13:44:00,631 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:44:13] 2025-06-04 13:44:00,631 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:44:13] 2025-06-04 13:44:00,631 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:44:13] 2025-06-04 13:44:00,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:44:13] 2025-06-04 13:44:00,631 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:44:13] 2025-06-04 13:44:00,631 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:44:13] 2025-06-04 13:44:00,631 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:44:13] 2025-06-04 13:44:00,632 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:44:13] 2025-06-04 13:44:00,632 | INFO     | job 6678778845 has completed (purged errors)
[2025-06-04 09:44:13] 2025-06-04 13:44:00,632 | INFO     | overall cleanup function is called
[2025-06-04 09:44:13] 2025-06-04 13:44:01,639 | INFO     | --- collectZombieJob: --- 10, [250248]
[2025-06-04 09:44:13] 2025-06-04 13:44:01,639 | INFO     | zombie collector waiting for pid 250248
[2025-06-04 09:44:13] 2025-06-04 13:44:01,639 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:44:13] 2025-06-04 13:44:01,639 | INFO     | collected zombie processes
[2025-06-04 09:44:13] 2025-06-04 13:44:01,639 | INFO     | will attempt to kill all subprocesses of pid=250248
[2025-06-04 09:44:13] 2025-06-04 13:44:01,908 | INFO     | process IDs to be killed: [250248] (in reverse order)
[2025-06-04 09:44:13] 2025-06-04 13:44:01,985 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:44:13] 2025-06-04 13:44:01,985 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:44:13] 2025-06-04 13:44:01,992 | INFO     | did not find any defunct processes belonging to 250248
[2025-06-04 09:44:13] 2025-06-04 13:44:01,997 | INFO     | did not find any defunct processes belonging to 250248
[2025-06-04 09:44:13] 2025-06-04 13:44:01,997 | INFO     | ready for new job
[2025-06-04 09:44:13] 2025-06-04 13:44:01,997 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:44:13] 2025-06-04 13:44:01,998 | INFO     | **************************************
[2025-06-04 09:44:13] 2025-06-04 13:44:01,998 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:44:13] 2025-06-04 13:44:01,999 | INFO     | **************************************
[2025-06-04 09:44:13] 2025-06-04 13:44:01,999 | INFO     | 
[2025-06-04 09:44:13] 2025-06-04 13:44:02,001 | INFO     | architecture information:
[2025-06-04 09:44:13] 2025-06-04 13:44:02,002 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:44:13] 2025-06-04 13:44:02,016 | INFO     | cat /etc/os-release:
[2025-06-04 09:44:13] NAME="CentOS Linux"
[2025-06-04 09:44:13] VERSION="7 (Core)"
[2025-06-04 09:44:13] ID="centos"
[2025-06-04 09:44:13] ID_LIKE="rhel fedora"
[2025-06-04 09:44:13] VERSION_ID="7"
[2025-06-04 09:44:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:44:13] ANSI_COLOR="0;31"
[2025-06-04 09:44:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:44:13] HOME_URL="https://www.centos.org/"
[2025-06-04 09:44:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:44:13] 
[2025-06-04 09:44:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:44:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:44:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:44:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:44:13] 
[2025-06-04 09:44:13] 2025-06-04 13:44:02,016 | INFO     | **************************************
[2025-06-04 09:44:13] 2025-06-04 13:44:02,518 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-04 09:44:13] 2025-06-04 13:44:02,535 | INFO     | sufficient remaining disk space (103889764352 B)
[2025-06-04 09:44:13] 2025-06-04 13:44:02,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:44:13] 2025-06-04 13:44:02,536 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:44:13] 2025-06-04 13:44:02,536 | INFO     | update_server=False
[2025-06-04 09:44:13] 2025-06-04 13:44:02,536 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:44:13] 2025-06-04 13:44:02,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:44:13] 2025-06-04 13:44:02,536 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:44:13] 2025-06-04 13:44:02,936 | INFO     | all data control threads have been joined
[2025-06-04 09:44:13] 2025-06-04 13:44:03,000 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:44:13] 2025-06-04 13:44:03,001 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:44:13] 2025-06-04 13:44:03,001 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:44:13] 2025-06-04 13:44:03,028 | INFO     | all payload control threads have been joined
[2025-06-04 09:44:13] 2025-06-04 13:44:03,220 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:44:13] 2025-06-04 13:44:03,220 | INFO     | aborting loop
[2025-06-04 09:44:13] 2025-06-04 13:44:03,542 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:44:13] 2025-06-04 13:44:03,542 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:44:13] 2025-06-04 13:44:03,614 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:44:13] 2025-06-04 13:44:03,624 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:44:13] 2025-06-04 13:44:03,701 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:44:13] 2025-06-04 13:44:03,942 | INFO     | [data] control thread has finished
[2025-06-04 09:44:13] 2025-06-04 13:44:03,991 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:44:13] 2025-06-04 13:44:04,033 | INFO     | [payload] control thread has finished
[2025-06-04 09:44:13] 2025-06-04 13:44:04,042 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:44:13] 2025-06-04 13:44:04,132 | INFO     | all job control threads have been joined
[2025-06-04 09:44:13] 2025-06-04 13:44:04,225 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:44:13] 2025-06-04 13:44:04,513 | INFO     | [job] validate thread has finished
[2025-06-04 09:44:13] 2025-06-04 13:44:04,531 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:44:13] 2025-06-04 13:44:04,592 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:44:13] 2025-06-04 13:44:04,610 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:44:13] 2025-06-04 13:44:05,137 | INFO     | [job] control thread has finished
[2025-06-04 09:44:13] 2025-06-04 13:44:05,631 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:44:13] 2025-06-04 13:44:06,542 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:44:13] 2025-06-04 13:44:08,572 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140272272553792)>', '<ExcThread(monitor, started 140271970916096)>']
[2025-06-04 09:44:13] 2025-06-04 13:44:09,032 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:44:13] 2025-06-04 13:44:09,032 | INFO     | [monitor] control thread has ended
[2025-06-04 09:44:13] 2025-06-04 13:44:13,597 | INFO     | all workflow threads have been joined
[2025-06-04 09:44:13] 2025-06-04 13:44:13,597 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:44:13] 2025-06-04 13:44:13,598 | INFO     | traces error code: 0
[2025-06-04 09:44:13] 2025-06-04 13:44:13,598 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:44:13] 2025-06-04 13:44:13,715 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:44:13] 2025-06-04 13:44:13,718 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:44:13] 2025-06-04 13:44:13,720 [wrapper] pilotpid: 243748
[2025-06-04 09:44:13] 2025-06-04 13:44:13,723 [wrapper] Pilot exit status: 0
[2025-06-04 09:44:13] 2025-06-04 13:44:13,745 [wrapper] pandaids: 6678778845
[2025-06-04 09:44:13] 2025-06-04 13:44:13,818 [wrapper] cleanup supervisor_pilot  75806 243749
[2025-06-04 09:44:13] 2025-06-04 13:44:13,820 [wrapper] Test setup, not cleaning
[2025-06-04 09:44:13] 2025-06-04 13:44:13,823 [wrapper] apfmon messages muted
[2025-06-04 09:44:13] 2025-06-04 13:44:13,825 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:44:13] 2025-06-04 13:44:13,828 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:44:13]  *** Error codes and diagnostics ***
[2025-06-04 09:44:13]     "exeErrorCode": 0,
[2025-06-04 09:44:13]     "exeErrorDiag": "",
[2025-06-04 09:44:13]     "pilotErrorCode": 0,
[2025-06-04 09:44:13]     "pilotErrorDiag": "",
[2025-06-04 09:44:13]  *** Listing of results directory ***
[2025-06-04 09:44:13] total 387564
[2025-06-04 09:44:13] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 09:44:13] -rwx------ 1 boincer umatlas     37140 Jun  4 03:55 runpilot2-wrapper.sh
[2025-06-04 09:44:13] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:55 queuedata.json
[2025-06-04 09:44:13] -rw-r--r-- 1 boincer umatlas       100 Jun  4 08:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:44:13] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 08:36 run_atlas
[2025-06-04 09:44:13] -rw-r--r-- 1 boincer umatlas       105 Jun  4 08:36 job.xml
[2025-06-04 09:44:13] -rw-r--r-- 2 boincer umatlas 216499132 Jun  4 08:36 EVNT.45006593._000659.pool.root.1
[2025-06-04 09:44:13] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:36 start_atlas.sh
[2025-06-04 09:44:13] drwxrwx--x 2 boincer umatlas      4096 Jun  4 08:36 shared
[2025-06-04 09:44:13] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 08:36 input.tar.gz
[2025-06-04 09:44:13] -rw-r--r-- 1 boincer umatlas         0 Jun  4 08:36 boinc_lockfile
[2025-06-04 09:44:13] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 08:36 pandaJob.out
[2025-06-04 09:44:13] -rw------- 1 boincer umatlas    986811 Jun  4 08:36 agis_schedconf.cvmfs.json
[2025-06-04 09:44:13] -rw------- 1 boincer umatlas   1598969 Jun  4 08:37 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:44:13] drwx------ 4 boincer umatlas      4096 Jun  4 08:37 pilot3
[2025-06-04 09:44:13] -rw-r--r-- 1 boincer umatlas      6299 Jun  4 09:39 init_data.xml
[2025-06-04 09:44:13] -rw------- 1 boincer umatlas        95 Jun  4 09:43 pilot_heartbeat.json
[2025-06-04 09:44:13] -rw------- 1 boincer umatlas 175155822 Jun  4 09:43 HITS.45006595._055580.pool.root.1
[2025-06-04 09:44:13] -rw-r--r-- 1 boincer umatlas       529 Jun  4 09:43 boinc_task_state.xml
[2025-06-04 09:44:13] -rw------- 1 boincer umatlas      1044 Jun  4 09:43 memory_monitor_summary.json
[2025-06-04 09:44:13] -rw------- 1 boincer umatlas    288508 Jun  4 09:43 log.45006595._055580.job.log.tgz.1
[2025-06-04 09:44:13] -rw------- 1 boincer umatlas      7735 Jun  4 09:44 heartbeat.json
[2025-06-04 09:44:13] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 09:44 boinc_mmap_file
[2025-06-04 09:44:13] -rw-r--r-- 1 boincer umatlas        27 Jun  4 09:44 wrapper_checkpoint.txt
[2025-06-04 09:44:13] -rw------- 1 boincer umatlas      4354 Jun  4 09:44 pilotlog.txt
[2025-06-04 09:44:13] -rw------- 1 boincer umatlas    403589 Jun  4 09:44 log.45006595._055580.job.log.1
[2025-06-04 09:44:13] -rw------- 1 boincer umatlas       357 Jun  4 09:44 output.list
[2025-06-04 09:44:13] -rw-r--r-- 1 boincer umatlas       620 Jun  4 09:44 runtime_log
[2025-06-04 09:44:13] -rw------- 1 boincer umatlas    706560 Jun  4 09:44 result.tar.gz
[2025-06-04 09:44:13] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 09:44 runtime_log.err
[2025-06-04 09:44:13] -rw------- 1 boincer umatlas       656 Jun  4 09:44 8ISNDmJ9xg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmyxaKDmQ85e4n.diag
[2025-06-04 09:44:13] -rw-r--r-- 1 boincer umatlas     21369 Jun  4 09:44 stderr.txt
[2025-06-04 09:44:13] HITS file was successfully produced:
[2025-06-04 09:44:13] -rw------- 1 boincer umatlas 175155822 Jun  4 09:43 shared/HITS.pool.root.1
[2025-06-04 09:44:13]  *** Contents of shared directory: ***
[2025-06-04 09:44:13] total 383692
[2025-06-04 09:44:13] -rw-r--r-- 2 boincer umatlas 216499132 Jun  4 08:36 ATLAS.root_0
[2025-06-04 09:44:13] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:36 start_atlas.sh
[2025-06-04 09:44:13] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 08:36 input.tar.gz
[2025-06-04 09:44:13] -rw------- 1 boincer umatlas 175155822 Jun  4 09:43 HITS.pool.root.1
[2025-06-04 09:44:13] -rw------- 1 boincer umatlas    706560 Jun  4 09:44 result.tar.gz
09:44:15 (240049): run_atlas exited; CPU time 30214.261391
09:44:15 (240049): called boinc_finish(0)

</stderr_txt>
]]>

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