Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:24:09 (3019795): wrapper (7.7.26015): starting
10:24:09 (3019795): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 10:24:09] Arguments: --nthreads 12
[2025-06-04 10:24:09] Threads: 12
[2025-06-04 10:24:09] Checking for CVMFS
[2025-06-04 10:24:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:24:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:24:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:24:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:24:10] 2.12.6.0 4996 866 95352 146781 1 389 27531932 32935936 12723 16776704 0 1960156 99.504 2783554 31845 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:24:10] CVMFS is ok
[2025-06-04 10:24:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:24:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:24:10] Further information can be found at the LHC@home message board.
[2025-06-04 10:24:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:24:10] Checking for apptainer binary...
[2025-06-04 10:24:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:24:10] Running /usr/bin/apptainer --version
[2025-06-04 10:24:10] apptainer version 1.4.1-1.el9
[2025-06-04 10:24:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:24:10] c6-5-7-3.aglt2.org
[2025-06-04 10:24:10] apptainer works
[2025-06-04 10:24:10] Set ATHENA_PROC_NUMBER=12
[2025-06-04 10:24:10] Set ATHENA_CORE_NUMBER=12
[2025-06-04 10:24:10] Starting ATLAS job with PandaID=6678362750
[2025-06-04 10:24:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:14:08]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:14:08] 2025-06-04 17:13:53,189 | INFO     | sum of square deviations: 1418469852.343381
[2025-06-04 13:14:08] 2025-06-04 17:13:53,190 | INFO     | sum of deviations: 52289892304.53611
[2025-06-04 13:14:08] 2025-06-04 17:13:53,190 | INFO     | mean x: 1749052120.873494
[2025-06-04 13:14:08] 2025-06-04 17:13:53,190 | INFO     | mean y: 2286613.6445783135
[2025-06-04 13:14:08] 2025-06-04 17:13:53,190 | INFO     | -- intersect: -64474055188.3351
[2025-06-04 13:14:08] 2025-06-04 17:13:53,190 | INFO     | intersect: -64474055188.3351
[2025-06-04 13:14:08] 2025-06-04 17:13:53,190 | INFO     | chi2: 2.820472239490743
[2025-06-04 13:14:08] 2025-06-04 17:13:53,191 | INFO     | sum of square deviations: 1294142244.1242297
[2025-06-04 13:14:08] 2025-06-04 17:13:53,192 | INFO     | sum of deviations: 52256443152.99381
[2025-06-04 13:14:08] 2025-06-04 17:13:53,192 | INFO     | mean x: 1749051968.3850932
[2025-06-04 13:14:08] 2025-06-04 17:13:53,192 | INFO     | mean y: 2286541.0807453417
[2025-06-04 13:14:08] 2025-06-04 17:13:53,192 | INFO     | -- intersect: -70623052499.14131
[2025-06-04 13:14:08] 2025-06-04 17:13:53,192 | INFO     | intersect: -70623052499.14131
[2025-06-04 13:14:08] 2025-06-04 17:13:53,192 | INFO     | chi2: 2.8043539009476617
[2025-06-04 13:14:08] 2025-06-04 17:13:53,199 | INFO     | current chi2=2.8043539009476617 (change=0.5714765888279576 %)
[2025-06-04 13:14:08] 2025-06-04 17:13:53,199 | INFO     | right removable region: 160
[2025-06-04 13:14:08] 2025-06-04 17:13:53,199 | INFO     | sum of square deviations: 1294104424.1242297
[2025-06-04 13:14:08] 2025-06-04 17:13:53,200 | INFO     | sum of deviations: 17920743541.478264
[2025-06-04 13:14:08] 2025-06-04 17:13:53,200 | INFO     | mean x: 1749052273.3850932
[2025-06-04 13:14:08] 2025-06-04 17:13:53,200 | INFO     | mean y: 2328557.782608696
[2025-06-04 13:14:08] 2025-06-04 17:13:53,200 | INFO     | -- intersect: -24218527694.35925
[2025-06-04 13:14:08] 2025-06-04 17:13:53,200 | INFO     | intersect: -24218527694.35925
[2025-06-04 13:14:08] 2025-06-04 17:13:53,200 | INFO     | chi2: 0.7558474657738086
[2025-06-04 13:14:08] 2025-06-04 17:13:53,200 | INFO     | current chi2=0.7558474657738086 (change=73.20138609446897 %)
[2025-06-04 13:14:08] 2025-06-04 17:13:53,201 | INFO     | sum of square deviations: 1177227508.3589737
[2025-06-04 13:14:08] 2025-06-04 17:13:53,201 | INFO     | sum of deviations: -2457987819.9230766
[2025-06-04 13:14:08] 2025-06-04 17:13:53,201 | INFO     | mean x: 1749052425.897436
[2025-06-04 13:14:08] 2025-06-04 17:13:53,201 | INFO     | mean y: 2355070.9423076925
[2025-06-04 13:14:08] 2025-06-04 17:13:53,202 | INFO     | -- intersect: 3654282611.4868836
[2025-06-04 13:14:08] 2025-06-04 17:13:53,202 | INFO     | intersect: 3654282611.4868836
[2025-06-04 13:14:08] 2025-06-04 17:13:53,202 | INFO     | chi2: 0.07798622312006218
[2025-06-04 13:14:08] 2025-06-04 17:13:53,202 | INFO     | current chi2=0.07798622312006218 (change=89.6822802679873 %)
[2025-06-04 13:14:08] 2025-06-04 17:13:53,202 | INFO     | sum of square deviations: 1067615814.3576163
[2025-06-04 13:14:08] 2025-06-04 17:13:53,219 | INFO     | sum of deviations: -1898604766.4635773
[2025-06-04 13:14:08] 2025-06-04 17:13:53,219 | INFO     | mean x: 1749052578.4039736
[2025-06-04 13:14:08] 2025-06-04 17:13:53,219 | INFO     | mean y: 2354300.105960265
[2025-06-04 13:14:08] 2025-06-04 17:13:53,219 | INFO     | -- intersect: 3112798635.5069795
[2025-06-04 13:14:08] 2025-06-04 17:13:53,219 | INFO     | intersect: 3112798635.5069795
[2025-06-04 13:14:08] 2025-06-04 17:13:53,220 | INFO     | chi2: 0.03587603510221376
[2025-06-04 13:14:08] 2025-06-04 17:13:53,220 | INFO     | current chi2=0.03587603510221376 (change=53.99695783833318 %)
[2025-06-04 13:14:08] 2025-06-04 17:13:53,220 | INFO     | sum of square deviations: 965018541.013698
[2025-06-04 13:14:08] 2025-06-04 17:13:53,220 | INFO     | sum of deviations: -2421188711.6712327
[2025-06-04 13:14:08] 2025-06-04 17:13:53,221 | INFO     | mean x: 1749052730.9178083
[2025-06-04 13:14:08] 2025-06-04 17:13:53,221 | INFO     | mean y: 2355057.52739726
[2025-06-04 13:14:08] 2025-06-04 17:13:53,221 | INFO     | -- intersect: 4390650772.30976
[2025-06-04 13:14:08] 2025-06-04 17:13:53,221 | INFO     | intersect: 4390650772.30976
[2025-06-04 13:14:08] 2025-06-04 17:13:53,221 | INFO     | chi2: 0.033971798046263234
[2025-06-04 13:14:08] 2025-06-04 17:13:53,221 | INFO     | current chi2=0.033971798046263234 (change=5.307824709517643 %)
[2025-06-04 13:14:08] 2025-06-04 17:13:53,221 | INFO     | left removable region: 40
[2025-06-04 13:14:08] 2025-06-04 17:13:53,221 | INFO     | sum of square deviations: 535828726.5916666
[2025-06-04 13:14:08] 2025-06-04 17:13:53,222 | INFO     | sum of deviations: -47032942.85833332
[2025-06-04 13:14:08] 2025-06-04 17:13:53,222 | INFO     | mean x: 1749053157.9416666
[2025-06-04 13:14:08] 2025-06-04 17:13:53,222 | INFO     | mean y: 2355425.591666667
[2025-06-04 13:14:08] 2025-06-04 17:13:53,222 | INFO     | -- intersect: 155880447.95641056
[2025-06-04 13:14:08] 2025-06-04 17:13:53,222 | INFO     | intersect: 155880447.95641056
[2025-06-04 13:14:08] 2025-06-04 17:13:53,222 | INFO     | chi2: 0.02316919507531722
[2025-06-04 13:14:08] 2025-06-04 17:13:53,226 | INFO     | -- intersect: 155880447.95641056
[2025-06-04 13:14:08] 2025-06-04 17:13:53,227 | INFO     | current memory leak: -0.09 B/s (using 120 data points, chi2=0.02)
[2025-06-04 13:14:08] 2025-06-04 17:13:53,227 | INFO     | ..............................
[2025-06-04 13:14:08] 2025-06-04 17:13:53,227 | INFO     | . Timing measurements:
[2025-06-04 13:14:08] 2025-06-04 17:13:53,228 | INFO     | . get job = 0 s
[2025-06-04 13:14:08] 2025-06-04 17:13:53,228 | INFO     | . initial setup = 2 s
[2025-06-04 13:14:08] 2025-06-04 17:13:53,228 | INFO     | . payload setup = 7 s
[2025-06-04 13:14:08] 2025-06-04 17:13:53,228 | INFO     | . stage-in = 0 s
[2025-06-04 13:14:08] 2025-06-04 17:13:53,228 | INFO     | . payload execution = 10123 s
[2025-06-04 13:14:08] 2025-06-04 17:13:53,228 | INFO     | . stage-out = 1 s
[2025-06-04 13:14:08] 2025-06-04 17:13:53,228 | INFO     | . log creation = 0 s
[2025-06-04 13:14:08] 2025-06-04 17:13:53,228 | INFO     | ..............................
[2025-06-04 13:14:08] 2025-06-04 17:13:53,438 | INFO     | 
[2025-06-04 13:14:08] 2025-06-04 17:13:53,438 | INFO     | job summary report
[2025-06-04 13:14:08] 2025-06-04 17:13:53,438 | INFO     | --------------------------------------------------
[2025-06-04 13:14:08] 2025-06-04 17:13:53,438 | INFO     | PanDA job id: 6678362750
[2025-06-04 13:14:08] 2025-06-04 17:13:53,438 | INFO     | task id: 45006595
[2025-06-04 13:14:08] 2025-06-04 17:13:53,438 | INFO     | errors: (none)
[2025-06-04 13:14:08] 2025-06-04 17:13:53,438 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:14:08] 2025-06-04 17:13:53,439 | INFO     | pilot state: finished 
[2025-06-04 13:14:08] 2025-06-04 17:13:53,439 | INFO     | transexitcode: 0
[2025-06-04 13:14:08] 2025-06-04 17:13:53,439 | INFO     | exeerrorcode: 0
[2025-06-04 13:14:08] 2025-06-04 17:13:53,439 | INFO     | exeerrordiag: 
[2025-06-04 13:14:08] 2025-06-04 17:13:53,439 | INFO     | exitcode: 0
[2025-06-04 13:14:08] 2025-06-04 17:13:53,439 | INFO     | exitmsg: OK
[2025-06-04 13:14:08] 2025-06-04 17:13:53,439 | INFO     | cpuconsumptiontime: 38286 s
[2025-06-04 13:14:08] 2025-06-04 17:13:53,439 | INFO     | nevents: 400
[2025-06-04 13:14:08] 2025-06-04 17:13:53,439 | INFO     | neventsw: 0
[2025-06-04 13:14:08] 2025-06-04 17:13:53,439 | INFO     | pid: 3031023
[2025-06-04 13:14:08] 2025-06-04 17:13:53,439 | INFO     | pgrp: 3031023
[2025-06-04 13:14:08] 2025-06-04 17:13:53,439 | INFO     | corecount: 12
[2025-06-04 13:14:08] 2025-06-04 17:13:53,439 | INFO     | event service: False
[2025-06-04 13:14:08] 2025-06-04 17:13:53,439 | INFO     | sizes: {0: 2397171, 1: 2397370, 5: 2397576, 11: 2397632, 10135: 2425964, 10136: 2425963, 10138: 2435144, 10158: 2435286}
[2025-06-04 13:14:08] 2025-06-04 17:13:53,439 | INFO     | --------------------------------------------------
[2025-06-04 13:14:08] 2025-06-04 17:13:53,439 | INFO     | 
[2025-06-04 13:14:08] 2025-06-04 17:13:53,440 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 13:14:08] 2025-06-04 17:13:53,473 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:14:08] 2025-06-04 17:13:53,473 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:14:08] 2025-06-04 17:13:53,474 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:14:08] 2025-06-04 17:13:53,474 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:14:08] 2025-06-04 17:13:53,474 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:14:08] 2025-06-04 17:13:53,474 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:14:08] 2025-06-04 17:13:53,474 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:14:08] 2025-06-04 17:13:53,474 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:14:08] 2025-06-04 17:13:53,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:14:08] 2025-06-04 17:13:53,474 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:14:08] 2025-06-04 17:13:53,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:14:08] 2025-06-04 17:13:53,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:14:08] 2025-06-04 17:13:53,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:14:08] 2025-06-04 17:13:53,475 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:14:08] 2025-06-04 17:13:53,475 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:14:08] 2025-06-04 17:13:53,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:14:08] 2025-06-04 17:13:53,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:14:08] 2025-06-04 17:13:53,475 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:14:08] 2025-06-04 17:13:53,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:14:08] 2025-06-04 17:13:53,475 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:14:08] 2025-06-04 17:13:53,475 | INFO     | job 6678362750 has completed (purged errors)
[2025-06-04 13:14:08] 2025-06-04 17:13:53,476 | INFO     | overall cleanup function is called
[2025-06-04 13:14:08] 2025-06-04 17:13:54,494 | INFO     | --- collectZombieJob: --- 10, [3031023]
[2025-06-04 13:14:08] 2025-06-04 17:13:54,495 | INFO     | zombie collector waiting for pid 3031023
[2025-06-04 13:14:08] 2025-06-04 17:13:54,495 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:14:08] 2025-06-04 17:13:54,495 | INFO     | collected zombie processes
[2025-06-04 13:14:08] 2025-06-04 17:13:54,495 | INFO     | will attempt to kill all subprocesses of pid=3031023
[2025-06-04 13:14:08] 2025-06-04 17:13:55,024 | INFO     | process IDs to be killed: [3031023] (in reverse order)
[2025-06-04 13:14:08] 2025-06-04 17:13:55,394 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:14:08] 2025-06-04 17:13:55,394 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:14:08] 2025-06-04 17:13:55,412 | INFO     | did not find any defunct processes belonging to 3031023
[2025-06-04 13:14:08] 2025-06-04 17:13:55,426 | INFO     | did not find any defunct processes belonging to 3031023
[2025-06-04 13:14:08] 2025-06-04 17:13:55,427 | INFO     | ready for new job
[2025-06-04 13:14:08] 2025-06-04 17:13:55,427 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:14:08] 2025-06-04 17:13:55,429 | INFO     | **************************************
[2025-06-04 13:14:08] 2025-06-04 17:13:55,429 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:14:08] 2025-06-04 17:13:55,429 | INFO     | **************************************
[2025-06-04 13:14:08] 2025-06-04 17:13:55,429 | INFO     | 
[2025-06-04 13:14:08] 2025-06-04 17:13:55,450 | INFO     | architecture information:
[2025-06-04 13:14:08] 2025-06-04 17:13:55,454 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:14:08] 2025-06-04 17:13:55,560 | INFO     | cat /etc/os-release:
[2025-06-04 13:14:08] NAME="CentOS Linux"
[2025-06-04 13:14:08] VERSION="7 (Core)"
[2025-06-04 13:14:08] ID="centos"
[2025-06-04 13:14:08] ID_LIKE="rhel fedora"
[2025-06-04 13:14:08] VERSION_ID="7"
[2025-06-04 13:14:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:14:08] ANSI_COLOR="0;31"
[2025-06-04 13:14:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:14:08] HOME_URL="https://www.centos.org/"
[2025-06-04 13:14:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:14:08] 
[2025-06-04 13:14:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:14:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:14:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:14:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:14:08] 
[2025-06-04 13:14:08] 2025-06-04 17:13:55,560 | INFO     | **************************************
[2025-06-04 13:14:08] 2025-06-04 17:13:56,064 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 13:14:08] 2025-06-04 17:13:56,193 | INFO     | sufficient remaining disk space (76359401472 B)
[2025-06-04 13:14:08] 2025-06-04 17:13:56,193 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:14:08] 2025-06-04 17:13:56,194 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:14:08] 2025-06-04 17:13:56,194 | INFO     | update_server=False
[2025-06-04 13:14:08] 2025-06-04 17:13:56,194 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:14:08] 2025-06-04 17:13:56,339 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:14:08] 2025-06-04 17:13:56,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:14:08] 2025-06-04 17:13:56,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:14:08] 2025-06-04 17:13:56,589 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:14:08] 2025-06-04 17:13:56,590 | INFO     | aborting loop
[2025-06-04 13:14:08] 2025-06-04 17:13:56,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:14:08] 2025-06-04 17:13:56,795 | INFO     | all payload control threads have been joined
[2025-06-04 13:14:08] 2025-06-04 17:13:57,116 | INFO     | all data control threads have been joined
[2025-06-04 13:14:08] 2025-06-04 17:13:57,199 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:14:08] 2025-06-04 17:13:57,301 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:14:08] 2025-06-04 17:13:57,303 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:14:08] 2025-06-04 17:13:57,517 | INFO     | [job] validate thread has finished
[2025-06-04 13:14:08] 2025-06-04 17:13:57,524 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:14:08] 2025-06-04 17:13:57,596 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:14:08] 2025-06-04 17:13:57,674 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:14:08] 2025-06-04 17:13:57,802 | INFO     | [payload] control thread has finished
[2025-06-04 13:14:08] 2025-06-04 17:13:57,875 | INFO     | all job control threads have been joined
[2025-06-04 13:14:08] 2025-06-04 17:13:57,937 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:14:08] 2025-06-04 17:13:58,122 | INFO     | [data] control thread has finished
[2025-06-04 13:14:08] 2025-06-04 17:13:58,167 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:14:08] 2025-06-04 17:13:58,321 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:14:08] 2025-06-04 17:13:58,452 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:14:08] 2025-06-04 17:13:58,536 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:14:08] 2025-06-04 17:13:58,726 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:14:08] 2025-06-04 17:13:58,881 | INFO     | [job] control thread has finished
[2025-06-04 13:14:08] 2025-06-04 17:13:59,458 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:14:08] 2025-06-04 17:14:01,946 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:14:08] 2025-06-04 17:14:02,131 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139655905474368)>', '<ExcThread(monitor, started 139655265634048)>']
[2025-06-04 13:14:08] 2025-06-04 17:14:02,373 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:14:08] 2025-06-04 17:14:02,374 | INFO     | [monitor] control thread has ended
[2025-06-04 13:14:08] 2025-06-04 17:14:07,156 | INFO     | all workflow threads have been joined
[2025-06-04 13:14:08] 2025-06-04 17:14:07,157 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:14:08] 2025-06-04 17:14:07,158 | INFO     | traces error code: 0
[2025-06-04 13:14:08] 2025-06-04 17:14:07,158 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:14:08] 2025-06-04 17:14:07,601 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:14:08] 2025-06-04 17:14:07,642 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:14:08] 2025-06-04 17:14:07,671 [wrapper] pilotpid: 3023633
[2025-06-04 13:14:08] 2025-06-04 17:14:07,674 [wrapper] Pilot exit status: 0
[2025-06-04 13:14:08] 2025-06-04 17:14:07,737 [wrapper] pandaids: 6678362750
[2025-06-04 13:14:08] 2025-06-04 17:14:08,007 [wrapper] cleanup supervisor_pilot 3536101 3023634
[2025-06-04 13:14:08] 2025-06-04 17:14:08,037 [wrapper] Test setup, not cleaning
[2025-06-04 13:14:08] 2025-06-04 17:14:08,077 [wrapper] apfmon messages muted
[2025-06-04 13:14:08] 2025-06-04 17:14:08,115 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:14:08] 2025-06-04 17:14:08,148 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:14:08]  *** Error codes and diagnostics ***
[2025-06-04 13:14:08]     "exeErrorCode": 0,
[2025-06-04 13:14:08]     "exeErrorDiag": "",
[2025-06-04 13:14:08]     "pilotErrorCode": 0,
[2025-06-04 13:14:08]     "pilotErrorDiag": "",
[2025-06-04 13:14:08]  *** Listing of results directory ***
[2025-06-04 13:14:08] total 392176
[2025-06-04 13:14:08] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 13:14:08] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 01:17 queuedata.json
[2025-06-04 13:14:08] -rwx------. 1 boincer umatlas     37140 Jun  4 01:18 runpilot2-wrapper.sh
[2025-06-04 13:14:08] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:14:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:24 run_atlas
[2025-06-04 13:14:08] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:24 job.xml
[2025-06-04 13:14:08] -rw-r--r--. 2 boincer umatlas 215486151 Jun  4 10:24 EVNT.45006593._002131.pool.root.1
[2025-06-04 13:14:08] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:24 start_atlas.sh
[2025-06-04 13:14:08] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:24 shared
[2025-06-04 13:14:08] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 10:24 input.tar.gz
[2025-06-04 13:14:08] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:24 boinc_lockfile
[2025-06-04 13:14:08] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 10:24 pandaJob.out
[2025-06-04 13:14:08] -rw-------. 1 boincer umatlas    986819 Jun  4 10:24 agis_schedconf.cvmfs.json
[2025-06-04 13:14:08] -rw-------. 1 boincer umatlas   1598969 Jun  4 10:24 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:14:08] drwx------. 4 boincer umatlas      4096 Jun  4 10:24 pilot3
[2025-06-04 13:14:08] -rw-r--r--. 1 boincer umatlas      6840 Jun  4 13:11 init_data.xml
[2025-06-04 13:14:08] -rw-------. 1 boincer umatlas 179711027 Jun  4 13:12 HITS.45006595._053245.pool.root.1
[2025-06-04 13:14:08] -rw-r--r--. 1 boincer umatlas       531 Jun  4 13:12 boinc_task_state.xml
[2025-06-04 13:14:08] -rw-------. 1 boincer umatlas        95 Jun  4 13:13 pilot_heartbeat.json
[2025-06-04 13:14:08] -rw-------. 1 boincer umatlas      1039 Jun  4 13:13 memory_monitor_summary.json
[2025-06-04 13:14:08] -rw-------. 1 boincer umatlas    411301 Jun  4 13:13 log.45006595._053245.job.log.tgz.1
[2025-06-04 13:14:08] -rw-------. 1 boincer umatlas      7717 Jun  4 13:13 heartbeat.json
[2025-06-04 13:14:08] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 13:13 boinc_mmap_file
[2025-06-04 13:14:08] -rw-r--r--. 1 boincer umatlas        28 Jun  4 13:13 wrapper_checkpoint.txt
[2025-06-04 13:14:08] -rw-------. 1 boincer umatlas      4353 Jun  4 13:14 pilotlog.txt
[2025-06-04 13:14:08] -rw-------. 1 boincer umatlas    868655 Jun  4 13:14 log.45006595._053245.job.log.1
[2025-06-04 13:14:08] -rw-------. 1 boincer umatlas       357 Jun  4 13:14 output.list
[2025-06-04 13:14:08] -rw-r--r--. 1 boincer umatlas       620 Jun  4 13:14 runtime_log
[2025-06-04 13:14:08] -rw-------. 1 boincer umatlas   1300480 Jun  4 13:14 result.tar.gz
[2025-06-04 13:14:08] -rw-r--r--. 1 boincer umatlas      8662 Jun  4 13:14 runtime_log.err
[2025-06-04 13:14:08] -rw-------. 1 boincer umatlas       656 Jun  4 13:14 54YMDmvgvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmglaKDmlijq3n.diag
[2025-06-04 13:14:08] -rw-r--r--. 1 boincer umatlas     20810 Jun  4 13:14 stderr.txt
[2025-06-04 13:14:08] HITS file was successfully produced:
[2025-06-04 13:14:08] -rw-------. 1 boincer umatlas 179711027 Jun  4 13:12 shared/HITS.pool.root.1
[2025-06-04 13:14:08]  *** Contents of shared directory: ***
[2025-06-04 13:14:08] total 387728
[2025-06-04 13:14:08] -rw-r--r--. 2 boincer umatlas 215486151 Jun  4 10:24 ATLAS.root_0
[2025-06-04 13:14:08] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:24 start_atlas.sh
[2025-06-04 13:14:08] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 10:24 input.tar.gz
[2025-06-04 13:14:08] -rw-------. 1 boincer umatlas 179711027 Jun  4 13:12 HITS.pool.root.1
[2025-06-04 13:14:08] -rw-------. 1 boincer umatlas   1300480 Jun  4 13:14 result.tar.gz
13:14:10 (3019795): run_atlas exited; CPU time 38490.337753
13:14:10 (3019795): called boinc_finish(0)

</stderr_txt>
]]>

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