Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:25:21 (51649): wrapper (7.7.26015): starting
08:25:21 (51649): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:25:21] Arguments: --nthreads 8
[2025-06-04 08:25:21] Threads: 8
[2025-06-04 08:25:21] Checking for CVMFS
[2025-06-04 08:25:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:25:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:25:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:25:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:25:22] 2.11.2.0 73730 10982 334316 146780 0 296 15603690 18432001 18463 130560 0 89395315 99.406 112484107 72250 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 08:25:22] CVMFS is ok
[2025-06-04 08:25:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:25:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:25:22] Further information can be found at the LHC@home message board.
[2025-06-04 08:25:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:25:22] Checking for apptainer binary...
[2025-06-04 08:25:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:25:22] Running /usr/bin/apptainer --version
[2025-06-04 08:25:22] apptainer version 1.3.2-1.el7
[2025-06-04 08:25:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:25:26] c-212-10.aglt2.org
[2025-06-04 08:25:26] apptainer works
[2025-06-04 08:25:26] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:25:26] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:25:26] Starting ATLAS job with PandaID=6678392160
[2025-06-04 08:25:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:01:35]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:01:35]  filetype=log
[2025-06-04 10:01:35]  guid=fbeea520-7c02-4fa8-a47b-9b60751da7fc
[2025-06-04 10:01:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:01:35]  is_altstaged=None
[2025-06-04 10:01:35]  is_tar=False
[2025-06-04 10:01:35]  lfn=log.45006595._055189.job.log.tgz.1
[2025-06-04 10:01:35]  mtime=0
[2025-06-04 10:01:35]  protocol_id=None
[2025-06-04 10:01:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:01:35]  replicas=None
[2025-06-04 10:01:35]  scope=mc23_13p6TeV
[2025-06-04 10:01:35]  status=None
[2025-06-04 10:01:35]  status_code=0
[2025-06-04 10:01:35]  storage_token=
[2025-06-04 10:01:35]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678392160/log.45006595._055189.job.log.tgz.1
[2025-06-04 10:01:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/7a/log.45006595._055189.job.log.tgz.1
[2025-06-04 10:01:35]  workdir=None
[2025-06-04 10:01:35] ]
[2025-06-04 10:01:35] 2025-06-04 14:01:14,392 | INFO     | transferring file log.45006595._055189.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678392160/log.45006595._055189.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:01:35] 2025-06-04 14:01:14,392 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678392160/log.45006595._055189.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._055189.job
[2025-06-04 10:01:35] 2025-06-04 14:01:14,568 | INFO     | adding to output.list: log.45006595._055189.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/7a/log.45006595._055189.job.log.tg
[2025-06-04 10:01:35] 2025-06-04 14:01:14,569 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:01:35] 2025-06-04 14:01:14,569 | INFO     | summary of transferred files:
[2025-06-04 10:01:35] 2025-06-04 14:01:14,569 | INFO     |  -- lfn=log.45006595._055189.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:01:35] 2025-06-04 14:01:14,569 | INFO     | stage-out finished correctly
[2025-06-04 10:01:35] 2025-06-04 14:01:14,650 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:01:35] 2025-06-04 14:01:14,779 | INFO     | job 6678392160 has state=finished
[2025-06-04 10:01:35] 2025-06-04 14:01:14,780 | INFO     | preparing for final server update for job 6678392160 in state='finished'
[2025-06-04 10:01:35] 2025-06-04 14:01:14,781 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:01:35] 2025-06-04 14:01:14,781 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:01:35] 2025-06-04 14:01:14,781 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:01:35] 2025-06-04 14:01:14,781 | INFO     | job 6678392160 has finished - writing final server update
[2025-06-04 10:01:35] 2025-06-04 14:01:14,781 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:01:35] 2025-06-04 14:01:14,786 | INFO     | executing command: lscpu
[2025-06-04 10:01:35] 2025-06-04 14:01:14,880 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:01:35] 2025-06-04 14:01:15,440 | WARNING  | process 67253 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:01:35] 2025-06-04 14:01:15,441 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678392160/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:01:35] 2025-06-04 14:01:15,735 | INFO     | number of running child processes to parent process 67253: 1
[2025-06-04 10:01:35] 2025-06-04 14:01:15,736 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:01:35] 2025-06-04 14:01:18,240 | INFO     | monitor loop #426: job 0:6678392160 is in state 'finished'
[2025-06-04 10:01:35] 2025-06-04 14:01:18,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:01:35] 2025-06-04 14:01:19,813 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:01:35] 2025-06-04 14:01:19,814 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678392160/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:01:35] 2025-06-04 14:01:19,815 | INFO     | extracted standard info from prmon json
[2025-06-04 10:01:35] 2025-06-04 14:01:19,815 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:01:35] 2025-06-04 14:01:19,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:01:35] 2025-06-04 14:01:19,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:01:35] 2025-06-04 14:01:19,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:01:35] 2025-06-04 14:01:19,817 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:01:35] 2025-06-04 14:01:19,817 | INFO     | sum of square deviations: 190403570.0
[2025-06-04 10:01:35] 2025-06-04 14:01:19,817 | INFO     | sum of deviations: -2827284974.0
[2025-06-04 10:01:35] 2025-06-04 14:01:19,817 | INFO     | mean x: 1749042976.0
[2025-06-04 10:01:35] 2025-06-04 14:01:19,817 | INFO     | mean y: 2517916.0
[2025-06-04 10:01:35] 2025-06-04 14:01:19,817 | INFO     | -- intersect: 25973895054.17573
[2025-06-04 10:01:35] 2025-06-04 14:01:19,817 | INFO     | intersect: 25973895054.17573
[2025-06-04 10:01:35] 2025-06-04 14:01:19,818 | INFO     | chi2: 0.004148214101526532
[2025-06-04 10:01:35] 2025-06-04 14:01:19,818 | INFO     | -- intersect: 25973895054.17573
[2025-06-04 10:01:35] 2025-06-04 14:01:19,818 | INFO     | current memory leak: -14.85 B/s (using 85 data points, chi2=0.00)
[2025-06-04 10:01:35] 2025-06-04 14:01:19,818 | INFO     | ..............................
[2025-06-04 10:01:35] 2025-06-04 14:01:19,818 | INFO     | . Timing measurements:
[2025-06-04 10:01:35] 2025-06-04 14:01:19,818 | INFO     | . get job = 0 s
[2025-06-04 10:01:35] 2025-06-04 14:01:19,818 | INFO     | . initial setup = 2 s
[2025-06-04 10:01:35] 2025-06-04 14:01:19,818 | INFO     | . payload setup = 36 s
[2025-06-04 10:01:35] 2025-06-04 14:01:19,818 | INFO     | . stage-in = 0 s
[2025-06-04 10:01:35] 2025-06-04 14:01:19,818 | INFO     | . payload execution = 5597 s
[2025-06-04 10:01:35] 2025-06-04 14:01:19,818 | INFO     | . stage-out = 0 s
[2025-06-04 10:01:35] 2025-06-04 14:01:19,818 | INFO     | . log creation = 0 s
[2025-06-04 10:01:35] 2025-06-04 14:01:19,819 | INFO     | ..............................
[2025-06-04 10:01:35] 2025-06-04 14:01:20,242 | INFO     | 
[2025-06-04 10:01:35] 2025-06-04 14:01:20,242 | INFO     | job summary report
[2025-06-04 10:01:35] 2025-06-04 14:01:20,242 | INFO     | --------------------------------------------------
[2025-06-04 10:01:35] 2025-06-04 14:01:20,242 | INFO     | PanDA job id: 6678392160
[2025-06-04 10:01:35] 2025-06-04 14:01:20,242 | INFO     | task id: 45006595
[2025-06-04 10:01:35] 2025-06-04 14:01:20,243 | INFO     | errors: (none)
[2025-06-04 10:01:35] 2025-06-04 14:01:20,243 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:01:35] 2025-06-04 14:01:20,243 | INFO     | pilot state: finished 
[2025-06-04 10:01:35] 2025-06-04 14:01:20,243 | INFO     | transexitcode: 0
[2025-06-04 10:01:35] 2025-06-04 14:01:20,243 | INFO     | exeerrorcode: 0
[2025-06-04 10:01:35] 2025-06-04 14:01:20,243 | INFO     | exeerrordiag: 
[2025-06-04 10:01:35] 2025-06-04 14:01:20,243 | INFO     | exitcode: 0
[2025-06-04 10:01:35] 2025-06-04 14:01:20,243 | INFO     | exitmsg: OK
[2025-06-04 10:01:35] 2025-06-04 14:01:20,243 | INFO     | cpuconsumptiontime: 31454 s
[2025-06-04 10:01:35] 2025-06-04 14:01:20,243 | INFO     | nevents: 400
[2025-06-04 10:01:35] 2025-06-04 14:01:20,243 | INFO     | neventsw: 0
[2025-06-04 10:01:35] 2025-06-04 14:01:20,243 | INFO     | pid: 67253
[2025-06-04 10:01:35] 2025-06-04 14:01:20,243 | INFO     | pgrp: 67253
[2025-06-04 10:01:35] 2025-06-04 14:01:20,243 | INFO     | corecount: 8
[2025-06-04 10:01:35] 2025-06-04 14:01:20,243 | INFO     | event service: False
[2025-06-04 10:01:35] 2025-06-04 14:01:20,243 | INFO     | sizes: {0: 2397342, 11: 2397342, 21: 2397576, 22: 2397604, 5637: 2424022, 5638: 2424021, 5640: 2433202, 5645: 2433316}
[2025-06-04 10:01:35] 2025-06-04 14:01:20,243 | INFO     | --------------------------------------------------
[2025-06-04 10:01:35] 2025-06-04 14:01:20,243 | INFO     | 
[2025-06-04 10:01:35] 2025-06-04 14:01:20,243 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:01:35] 2025-06-04 14:01:20,261 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:01:35] 2025-06-04 14:01:20,262 | INFO     | job 6678392160 has completed (purged errors)
[2025-06-04 10:01:35] 2025-06-04 14:01:20,262 | INFO     | overall cleanup function is called
[2025-06-04 10:01:35] 2025-06-04 14:01:21,268 | INFO     | --- collectZombieJob: --- 10, [67253]
[2025-06-04 10:01:35] 2025-06-04 14:01:21,268 | INFO     | zombie collector waiting for pid 67253
[2025-06-04 10:01:35] 2025-06-04 14:01:21,268 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:01:35] 2025-06-04 14:01:21,268 | INFO     | collected zombie processes
[2025-06-04 10:01:35] 2025-06-04 14:01:21,268 | INFO     | will attempt to kill all subprocesses of pid=67253
[2025-06-04 10:01:35] 2025-06-04 14:01:21,530 | INFO     | process IDs to be killed: [67253] (in reverse order)
[2025-06-04 10:01:35] 2025-06-04 14:01:21,827 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:01:35] 2025-06-04 14:01:21,827 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:01:35] 2025-06-04 14:01:21,834 | INFO     | did not find any defunct processes belonging to 67253
[2025-06-04 10:01:35] 2025-06-04 14:01:21,846 | INFO     | did not find any defunct processes belonging to 67253
[2025-06-04 10:01:35] 2025-06-04 14:01:21,846 | INFO     | ready for new job
[2025-06-04 10:01:35] 2025-06-04 14:01:21,847 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:01:35] 2025-06-04 14:01:21,851 | INFO     | **************************************
[2025-06-04 10:01:35] 2025-06-04 14:01:21,851 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:01:35] 2025-06-04 14:01:21,851 | INFO     | **************************************
[2025-06-04 10:01:35] 2025-06-04 14:01:21,852 | INFO     | 
[2025-06-04 10:01:35] 2025-06-04 14:01:21,864 | INFO     | architecture information:
[2025-06-04 10:01:35] 2025-06-04 14:01:21,869 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:01:35] 2025-06-04 14:01:21,935 | INFO     | cat /etc/os-release:
[2025-06-04 10:01:35] NAME="CentOS Linux"
[2025-06-04 10:01:35] VERSION="7 (Core)"
[2025-06-04 10:01:35] ID="centos"
[2025-06-04 10:01:35] ID_LIKE="rhel fedora"
[2025-06-04 10:01:35] VERSION_ID="7"
[2025-06-04 10:01:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:01:35] ANSI_COLOR="0;31"
[2025-06-04 10:01:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:01:35] HOME_URL="https://www.centos.org/"
[2025-06-04 10:01:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:01:35] 
[2025-06-04 10:01:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:01:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:01:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:01:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:01:35] 
[2025-06-04 10:01:35] 2025-06-04 14:01:21,936 | INFO     | **************************************
[2025-06-04 10:01:35] 2025-06-04 14:01:22,438 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 10:01:35] 2025-06-04 14:01:22,463 | INFO     | sufficient remaining disk space (104009302016 B)
[2025-06-04 10:01:35] 2025-06-04 14:01:22,463 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:01:35] 2025-06-04 14:01:22,463 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:01:35] 2025-06-04 14:01:22,463 | INFO     | update_server=False
[2025-06-04 10:01:35] 2025-06-04 14:01:22,463 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:01:35] 2025-06-04 14:01:22,464 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:01:35] 2025-06-04 14:01:22,464 | INFO     | aborting loop
[2025-06-04 10:01:35] 2025-06-04 14:01:22,485 | INFO     | all data control threads have been joined
[2025-06-04 10:01:35] 2025-06-04 14:01:22,668 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:01:35] 2025-06-04 14:01:22,898 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:01:35] 2025-06-04 14:01:22,898 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:01:35] 2025-06-04 14:01:22,898 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:01:35] 2025-06-04 14:01:23,449 | INFO     | all job control threads have been joined
[2025-06-04 10:01:35] 2025-06-04 14:01:23,469 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:01:35] 2025-06-04 14:01:23,471 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:01:35] 2025-06-04 14:01:23,491 | INFO     | [data] control thread has finished
[2025-06-04 10:01:35] 2025-06-04 14:01:23,614 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:01:35] 2025-06-04 14:01:23,911 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:01:35] 2025-06-04 14:01:23,967 | INFO     | all payload control threads have been joined
[2025-06-04 10:01:35] 2025-06-04 14:01:24,150 | INFO     | [job] validate thread has finished
[2025-06-04 10:01:35] 2025-06-04 14:01:24,225 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:01:35] 2025-06-04 14:01:24,454 | INFO     | [job] control thread has finished
[2025-06-04 10:01:35] 2025-06-04 14:01:24,473 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:01:35] 2025-06-04 14:01:24,674 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:01:35] 2025-06-04 14:01:24,784 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:01:35] 2025-06-04 14:01:24,838 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:01:35] 2025-06-04 14:01:24,904 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:01:35] 2025-06-04 14:01:24,915 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:01:35] 2025-06-04 14:01:24,972 | INFO     | [payload] control thread has finished
[2025-06-04 10:01:35] 2025-06-04 14:01:25,296 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:01:35] 2025-06-04 14:01:25,921 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:01:35] 2025-06-04 14:01:29,297 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:01:35] 2025-06-04 14:01:30,223 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139909439608640)>', '<ExcThread(monitor, started 139908995856128)>']
[2025-06-04 10:01:35] 2025-06-04 14:01:30,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:01:35] 2025-06-04 14:01:30,948 | INFO     | [monitor] control thread has ended
[2025-06-04 10:01:35] 2025-06-04 14:01:35,248 | INFO     | all workflow threads have been joined
[2025-06-04 10:01:35] 2025-06-04 14:01:35,248 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:01:35] 2025-06-04 14:01:35,248 | INFO     | traces error code: 0
[2025-06-04 10:01:35] 2025-06-04 14:01:35,249 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:01:35] 2025-06-04 14:01:35,345 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:01:35] 2025-06-04 14:01:35,347 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:01:35] 2025-06-04 14:01:35,349 [wrapper] pilotpid: 56067
[2025-06-04 10:01:35] 2025-06-04 14:01:35,352 [wrapper] Pilot exit status: 0
[2025-06-04 10:01:35] 2025-06-04 14:01:35,359 [wrapper] pandaids: 6678392160
[2025-06-04 10:01:35] 2025-06-04 14:01:35,400 [wrapper] cleanup supervisor_pilot 93159 56068
[2025-06-04 10:01:35] 2025-06-04 14:01:35,401 [wrapper] Test setup, not cleaning
[2025-06-04 10:01:35] 2025-06-04 14:01:35,403 [wrapper] apfmon messages muted
[2025-06-04 10:01:35] 2025-06-04 14:01:35,404 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:01:35] 2025-06-04 14:01:35,411 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:01:35]  *** Error codes and diagnostics ***
[2025-06-04 10:01:35]     "exeErrorCode": 0,
[2025-06-04 10:01:35]     "exeErrorDiag": "",
[2025-06-04 10:01:35]     "pilotErrorCode": 0,
[2025-06-04 10:01:35]     "pilotErrorDiag": "",
[2025-06-04 10:01:35]  *** Listing of results directory ***
[2025-06-04 10:01:35] total 398108
[2025-06-04 10:01:35] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 10:01:35] -rwx------ 1 boincer umatlas     37140 Jun  4 03:39 runpilot2-wrapper.sh
[2025-06-04 10:01:35] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:39 queuedata.json
[2025-06-04 10:01:35] -rw-r--r-- 1 boincer umatlas       100 Jun  4 08:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:01:35] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 08:25 run_atlas
[2025-06-04 10:01:35] -rw-r--r-- 1 boincer umatlas       105 Jun  4 08:25 job.xml
[2025-06-04 10:01:35] -rw-r--r-- 2 boincer umatlas 215036282 Jun  4 08:25 EVNT.45006593._002208.pool.root.1
[2025-06-04 10:01:35] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:25 start_atlas.sh
[2025-06-04 10:01:35] drwxrwx--x 2 boincer umatlas      4096 Jun  4 08:25 shared
[2025-06-04 10:01:35] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 08:25 input.tar.gz
[2025-06-04 10:01:35] -rw-r--r-- 1 boincer umatlas         0 Jun  4 08:25 boinc_lockfile
[2025-06-04 10:01:35] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 08:25 pandaJob.out
[2025-06-04 10:01:35] -rw------- 1 boincer umatlas    986811 Jun  4 08:26 agis_schedconf.cvmfs.json
[2025-06-04 10:01:35] -rw------- 1 boincer umatlas   1598969 Jun  4 08:26 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:01:35] drwx------ 4 boincer umatlas      4096 Jun  4 08:26 pilot3
[2025-06-04 10:01:35] -rw------- 1 boincer umatlas 187076395 Jun  4 10:00 HITS.45006595._055189.pool.root.1
[2025-06-04 10:01:35] -rw-r--r-- 1 boincer umatlas       529 Jun  4 10:00 boinc_task_state.xml
[2025-06-04 10:01:35] -rw-r--r-- 1 boincer umatlas      6388 Jun  4 10:00 init_data.xml
[2025-06-04 10:01:35] -rw------- 1 boincer umatlas      1064 Jun  4 10:01 memory_monitor_summary.json
[2025-06-04 10:01:35] -rw------- 1 boincer umatlas    318925 Jun  4 10:01 log.45006595._055189.job.log.tgz.1
[2025-06-04 10:01:35] -rw------- 1 boincer umatlas      7746 Jun  4 10:01 heartbeat.json
[2025-06-04 10:01:35] -rw------- 1 boincer umatlas        95 Jun  4 10:01 pilot_heartbeat.json
[2025-06-04 10:01:35] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:01 boinc_mmap_file
[2025-06-04 10:01:35] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:01 wrapper_checkpoint.txt
[2025-06-04 10:01:35] -rw------- 1 boincer umatlas      4354 Jun  4 10:01 pilotlog.txt
[2025-06-04 10:01:35] -rw------- 1 boincer umatlas    540693 Jun  4 10:01 log.45006595._055189.job.log.1
[2025-06-04 10:01:35] -rw------- 1 boincer umatlas       357 Jun  4 10:01 output.list
[2025-06-04 10:01:35] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:01 runtime_log
[2025-06-04 10:01:35] -rw------- 1 boincer umatlas    880640 Jun  4 10:01 result.tar.gz
[2025-06-04 10:01:35] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 10:01 runtime_log.err
[2025-06-04 10:01:35] -rw------- 1 boincer umatlas       657 Jun  4 10:01 7WOMDmEuxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjgnKDmjZUU0m.diag
[2025-06-04 10:01:35] -rw-r--r-- 1 boincer umatlas     21204 Jun  4 10:01 stderr.txt
[2025-06-04 10:01:35] HITS file was successfully produced:
[2025-06-04 10:01:35] -rw------- 1 boincer umatlas 187076395 Jun  4 10:00 shared/HITS.pool.root.1
[2025-06-04 10:01:35]  *** Contents of shared directory: ***
[2025-06-04 10:01:35] total 394072
[2025-06-04 10:01:35] -rw-r--r-- 2 boincer umatlas 215036282 Jun  4 08:25 ATLAS.root_0
[2025-06-04 10:01:35] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:25 start_atlas.sh
[2025-06-04 10:01:35] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 08:25 input.tar.gz
[2025-06-04 10:01:35] -rw------- 1 boincer umatlas 187076395 Jun  4 10:00 HITS.pool.root.1
[2025-06-04 10:01:35] -rw------- 1 boincer umatlas    880640 Jun  4 10:01 result.tar.gz
10:01:36 (51649): run_atlas exited; CPU time 31191.218611
10:01:36 (51649): called boinc_finish(0)

</stderr_txt>
]]>

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