Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:21:06 (13210): wrapper (7.7.26015): starting
08:21:06 (13210): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:21:06] Arguments: --nthreads 8
[2025-06-04 08:21:06] Threads: 8
[2025-06-04 08:21:06] Checking for CVMFS
[2025-06-04 08:21:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:21:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:21:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:21:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:21:06] 2.11.2.0 2913 35628 71996 146780 0 55 15493325 20275201 1 130560 0 11314086 99.976 6206498 7715 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 08:21:06] CVMFS is ok
[2025-06-04 08:21:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:21:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:21:06] Further information can be found at the LHC@home message board.
[2025-06-04 08:21:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:21:06] Checking for apptainer binary...
[2025-06-04 08:21:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:21:06] Running /usr/bin/apptainer --version
[2025-06-04 08:21:06] apptainer version 1.3.2-1.el7
[2025-06-04 08:21:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:21:08] c-115-3.aglt2.org
[2025-06-04 08:21:08] apptainer works
[2025-06-04 08:21:08] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:21:08] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:21:08] Starting ATLAS job with PandaID=6666948852
[2025-06-04 08:21:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:55:39]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:55:39] 2025-06-04 14:55:20,551 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:55:39] 2025-06-04 14:55:22,913 | INFO     | monitor loop #684: job 0:6666948852 is in state 'finished'
[2025-06-04 10:55:39] 2025-06-04 14:55:22,916 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:55:39] 2025-06-04 14:55:25,420 | INFO     | monitor loop #685: job 0:6666948852 is in state 'finished'
[2025-06-04 10:55:39] 2025-06-04 14:55:25,420 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:55:39] 2025-06-04 14:55:26,018 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 10:55:39] 2025-06-04 14:55:26,018 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666948852/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:55:39] 2025-06-04 14:55:26,020 | INFO     | extracted standard info from prmon json
[2025-06-04 10:55:39] 2025-06-04 14:55:26,020 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:55:39] 2025-06-04 14:55:26,021 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:55:39] 2025-06-04 14:55:26,022 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:55:39] 2025-06-04 14:55:26,022 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:55:39] 2025-06-04 14:55:26,026 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:55:39] 2025-06-04 14:55:26,027 | INFO     | sum of square deviations: 1067554900.0
[2025-06-04 10:55:39] 2025-06-04 14:55:26,028 | INFO     | sum of deviations: -12175218323.000002
[2025-06-04 10:55:39] 2025-06-04 14:55:26,028 | INFO     | mean x: 1749044292.0
[2025-06-04 10:55:39] 2025-06-04 14:55:26,028 | INFO     | mean y: 2570256.821192053
[2025-06-04 10:55:39] 2025-06-04 14:55:26,028 | INFO     | -- intersect: 19950018497.372536
[2025-06-04 10:55:39] 2025-06-04 14:55:26,028 | INFO     | intersect: 19950018497.372536
[2025-06-04 10:55:39] 2025-06-04 14:55:26,029 | INFO     | chi2: 1.6433384288450148
[2025-06-04 10:55:39] 2025-06-04 14:55:26,029 | INFO     | sum of square deviations: 964976232.5
[2025-06-04 10:55:39] 2025-06-04 14:55:26,030 | INFO     | sum of deviations: -11012872137.5
[2025-06-04 10:55:39] 2025-06-04 14:55:26,030 | INFO     | mean x: 1749044139.5
[2025-06-04 10:55:39] 2025-06-04 14:55:26,030 | INFO     | mean y: 2571985.48630137
[2025-06-04 10:55:39] 2025-06-04 14:55:26,030 | INFO     | -- intersect: 19963684832.02184
[2025-06-04 10:55:39] 2025-06-04 14:55:26,031 | INFO     | intersect: 19963684832.02184
[2025-06-04 10:55:39] 2025-06-04 14:55:26,031 | INFO     | chi2: 1.6433105197461317
[2025-06-04 10:55:39] 2025-06-04 14:55:26,031 | INFO     | current chi2=1.6433105197461317 (change=0.0016983171812440573 %)
[2025-06-04 10:55:39] 2025-06-04 14:55:26,031 | INFO     | right removable region: 145
[2025-06-04 10:55:39] 2025-06-04 14:55:26,032 | INFO     | sum of square deviations: 964976232.5
[2025-06-04 10:55:39] 2025-06-04 14:55:26,032 | INFO     | sum of deviations: -35106654150.50001
[2025-06-04 10:55:39] 2025-06-04 14:55:26,033 | INFO     | mean x: 1749044444.5
[2025-06-04 10:55:39] 2025-06-04 14:55:26,033 | INFO     | mean y: 2603834.2534246575
[2025-06-04 10:55:39] 2025-06-04 14:55:26,033 | INFO     | -- intersect: 63634324843.41819
[2025-06-04 10:55:39] 2025-06-04 14:55:26,033 | INFO     | intersect: 63634324843.41819
[2025-06-04 10:55:39] 2025-06-04 14:55:26,033 | INFO     | chi2: 0.17120510335876435
[2025-06-04 10:55:39] 2025-06-04 14:55:26,033 | INFO     | current chi2=0.17120510335876435 (change=89.58187185587255 %)
[2025-06-04 10:55:39] 2025-06-04 14:55:26,034 | INFO     | sum of square deviations: 869188390.0
[2025-06-04 10:55:39] 2025-06-04 14:55:26,034 | INFO     | sum of deviations: -35312233879.99999
[2025-06-04 10:55:39] 2025-06-04 14:55:26,034 | INFO     | mean x: 1749044597.0
[2025-06-04 10:55:39] 2025-06-04 14:55:26,035 | INFO     | mean y: 2604072.0425531915
[2025-06-04 10:55:39] 2025-06-04 14:55:26,035 | INFO     | -- intersect: 71060469761.91254
[2025-06-04 10:55:39] 2025-06-04 14:55:26,035 | INFO     | intersect: 71060469761.91254
[2025-06-04 10:55:39] 2025-06-04 14:55:26,035 | INFO     | chi2: 0.1367628030151194
[2025-06-04 10:55:39] 2025-06-04 14:55:26,035 | INFO     | current chi2=0.1367628030151194 (change=20.117566397229584 %)
[2025-06-04 10:55:39] 2025-06-04 14:55:26,035 | INFO     | left removable region: 20
[2025-06-04 10:55:39] 2025-06-04 14:55:26,036 | INFO     | sum of square deviations: 605592750.0
[2025-06-04 10:55:39] 2025-06-04 14:55:26,036 | INFO     | sum of deviations: -26633789866.0
[2025-06-04 10:55:39] 2025-06-04 14:55:26,036 | INFO     | mean x: 1749044719.0
[2025-06-04 10:55:39] 2025-06-04 14:55:26,036 | INFO     | mean y: 2595130.704
[2025-06-04 10:55:39] 2025-06-04 14:55:26,037 | INFO     | -- intersect: 76925064087.08272
[2025-06-04 10:55:39] 2025-06-04 14:55:26,037 | INFO     | intersect: 76925064087.08272
[2025-06-04 10:55:39] 2025-06-04 14:55:26,037 | INFO     | chi2: 0.12884322841146809
[2025-06-04 10:55:39] 2025-06-04 14:55:26,037 | INFO     | -- intersect: 76925064087.08272
[2025-06-04 10:55:39] 2025-06-04 14:55:26,037 | INFO     | current memory leak: -43.98 B/s (using 125 data points, chi2=0.13)
[2025-06-04 10:55:39] 2025-06-04 14:55:26,038 | INFO     | ..............................
[2025-06-04 10:55:39] 2025-06-04 14:55:26,038 | INFO     | . Timing measurements:
[2025-06-04 10:55:39] 2025-06-04 14:55:26,038 | INFO     | . get job = 0 s
[2025-06-04 10:55:39] 2025-06-04 14:55:26,038 | INFO     | . initial setup = 2 s
[2025-06-04 10:55:39] 2025-06-04 14:55:26,039 | INFO     | . payload setup = 11 s
[2025-06-04 10:55:39] 2025-06-04 14:55:26,039 | INFO     | . stage-in = 0 s
[2025-06-04 10:55:39] 2025-06-04 14:55:26,039 | INFO     | . payload execution = 9201 s
[2025-06-04 10:55:39] 2025-06-04 14:55:26,039 | INFO     | . stage-out = 0 s
[2025-06-04 10:55:39] 2025-06-04 14:55:26,039 | INFO     | . log creation = 0 s
[2025-06-04 10:55:39] 2025-06-04 14:55:26,039 | INFO     | ..............................
[2025-06-04 10:55:39] 2025-06-04 14:55:26,142 | INFO     | 
[2025-06-04 10:55:39] 2025-06-04 14:55:26,142 | INFO     | job summary report
[2025-06-04 10:55:39] 2025-06-04 14:55:26,142 | INFO     | --------------------------------------------------
[2025-06-04 10:55:39] 2025-06-04 14:55:26,142 | INFO     | PanDA job id: 6666948852
[2025-06-04 10:55:39] 2025-06-04 14:55:26,143 | INFO     | task id: 44871837
[2025-06-04 10:55:39] 2025-06-04 14:55:26,143 | INFO     | errors: (none)
[2025-06-04 10:55:39] 2025-06-04 14:55:26,143 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:55:39] 2025-06-04 14:55:26,143 | INFO     | pilot state: finished 
[2025-06-04 10:55:39] 2025-06-04 14:55:26,143 | INFO     | transexitcode: 0
[2025-06-04 10:55:39] 2025-06-04 14:55:26,143 | INFO     | exeerrorcode: 0
[2025-06-04 10:55:39] 2025-06-04 14:55:26,143 | INFO     | exeerrordiag: 
[2025-06-04 10:55:39] 2025-06-04 14:55:26,144 | INFO     | exitcode: 0
[2025-06-04 10:55:39] 2025-06-04 14:55:26,144 | INFO     | exitmsg: OK
[2025-06-04 10:55:39] 2025-06-04 14:55:26,144 | INFO     | cpuconsumptiontime: 68701 s
[2025-06-04 10:55:39] 2025-06-04 14:55:26,144 | INFO     | nevents: 400
[2025-06-04 10:55:39] 2025-06-04 14:55:26,144 | INFO     | neventsw: 0
[2025-06-04 10:55:39] 2025-06-04 14:55:26,144 | INFO     | pid: 23423
[2025-06-04 10:55:39] 2025-06-04 14:55:26,144 | INFO     | pgrp: 23423
[2025-06-04 10:55:39] 2025-06-04 14:55:26,145 | INFO     | corecount: 8
[2025-06-04 10:55:39] 2025-06-04 14:55:26,145 | INFO     | event service: False
[2025-06-04 10:55:39] 2025-06-04 14:55:26,145 | INFO     | sizes: {0: 2397215, 1: 2397414, 6: 2397620, 11: 2397648, 9216: 2425765, 9218: 2434706, 9219: 2434890, 9225: 2435060}
[2025-06-04 10:55:39] 2025-06-04 14:55:26,145 | INFO     | --------------------------------------------------
[2025-06-04 10:55:39] 2025-06-04 14:55:26,145 | INFO     | 
[2025-06-04 10:55:39] 2025-06-04 14:55:26,145 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 10:55:39] 2025-06-04 14:55:26,173 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:55:39] 2025-06-04 14:55:26,173 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:55:39] 2025-06-04 14:55:26,174 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:55:39] 2025-06-04 14:55:26,174 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:55:39] 2025-06-04 14:55:26,174 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:55:39] 2025-06-04 14:55:26,174 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:55:39] 2025-06-04 14:55:26,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:55:39] 2025-06-04 14:55:26,175 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:55:39] 2025-06-04 14:55:26,175 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:55:39] 2025-06-04 14:55:26,175 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:55:39] 2025-06-04 14:55:26,175 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:55:39] 2025-06-04 14:55:26,175 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:55:39] 2025-06-04 14:55:26,175 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:55:39] 2025-06-04 14:55:26,176 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:55:39] 2025-06-04 14:55:26,176 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:55:39] 2025-06-04 14:55:26,176 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:55:39] 2025-06-04 14:55:26,176 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:55:39] 2025-06-04 14:55:26,176 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:55:39] 2025-06-04 14:55:26,177 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:55:39] 2025-06-04 14:55:26,177 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:55:39] 2025-06-04 14:55:26,177 | INFO     | job 6666948852 has completed (purged errors)
[2025-06-04 10:55:39] 2025-06-04 14:55:26,177 | INFO     | overall cleanup function is called
[2025-06-04 10:55:39] 2025-06-04 14:55:27,186 | INFO     | --- collectZombieJob: --- 10, [23423]
[2025-06-04 10:55:39] 2025-06-04 14:55:27,186 | INFO     | zombie collector waiting for pid 23423
[2025-06-04 10:55:39] 2025-06-04 14:55:27,187 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:55:39] 2025-06-04 14:55:27,187 | INFO     | collected zombie processes
[2025-06-04 10:55:39] 2025-06-04 14:55:27,187 | INFO     | will attempt to kill all subprocesses of pid=23423
[2025-06-04 10:55:39] 2025-06-04 14:55:27,274 | INFO     | process IDs to be killed: [23423] (in reverse order)
[2025-06-04 10:55:39] 2025-06-04 14:55:27,331 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:55:39] 2025-06-04 14:55:27,332 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:55:39] 2025-06-04 14:55:27,336 | INFO     | did not find any defunct processes belonging to 23423
[2025-06-04 10:55:39] 2025-06-04 14:55:27,339 | INFO     | did not find any defunct processes belonging to 23423
[2025-06-04 10:55:39] 2025-06-04 14:55:27,339 | INFO     | ready for new job
[2025-06-04 10:55:39] 2025-06-04 14:55:27,340 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:55:39] 2025-06-04 14:55:27,343 | INFO     | **************************************
[2025-06-04 10:55:39] 2025-06-04 14:55:27,343 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:55:39] 2025-06-04 14:55:27,343 | INFO     | **************************************
[2025-06-04 10:55:39] 2025-06-04 14:55:27,343 | INFO     | 
[2025-06-04 10:55:39] 2025-06-04 14:55:27,344 | INFO     | architecture information:
[2025-06-04 10:55:39] 2025-06-04 14:55:27,344 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:55:39] 2025-06-04 14:55:27,362 | INFO     | cat /etc/os-release:
[2025-06-04 10:55:39] NAME="CentOS Linux"
[2025-06-04 10:55:39] VERSION="7 (Core)"
[2025-06-04 10:55:39] ID="centos"
[2025-06-04 10:55:39] ID_LIKE="rhel fedora"
[2025-06-04 10:55:39] VERSION_ID="7"
[2025-06-04 10:55:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:55:39] ANSI_COLOR="0;31"
[2025-06-04 10:55:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:55:39] HOME_URL="https://www.centos.org/"
[2025-06-04 10:55:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:55:39] 
[2025-06-04 10:55:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:55:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:55:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:55:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:55:39] 
[2025-06-04 10:55:39] 2025-06-04 14:55:27,362 | INFO     | **************************************
[2025-06-04 10:55:39] 2025-06-04 14:55:27,866 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:55:39] 2025-06-04 14:55:27,887 | INFO     | sufficient remaining disk space (18596495360 B)
[2025-06-04 10:55:39] 2025-06-04 14:55:27,888 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:55:39] 2025-06-04 14:55:27,888 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:55:39] 2025-06-04 14:55:27,888 | INFO     | update_server=False
[2025-06-04 10:55:39] 2025-06-04 14:55:27,888 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:55:39] 2025-06-04 14:55:27,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:55:39] 2025-06-04 14:55:27,889 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:55:39] 2025-06-04 14:55:27,890 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:55:39] 2025-06-04 14:55:27,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:55:39] 2025-06-04 14:55:27,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:55:39] 2025-06-04 14:55:27,924 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 10:55:39] 2025-06-04 14:55:27,924 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 10:55:39] 2025-06-04 14:55:27,924 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:55:39] 2025-06-04 14:55:27,925 | INFO     | will abort loop
[2025-06-04 10:55:39] 2025-06-04 14:55:28,337 | INFO     | all data control threads have been joined
[2025-06-04 10:55:39] 2025-06-04 14:55:28,520 | INFO     | all payload control threads have been joined
[2025-06-04 10:55:39] 2025-06-04 14:55:28,894 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:55:39] 2025-06-04 14:55:28,895 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:55:39] 2025-06-04 14:55:28,930 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:55:39] 2025-06-04 14:55:28,970 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:55:39] 2025-06-04 14:55:29,233 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:55:39] 2025-06-04 14:55:29,234 | INFO     | [job] validate thread has finished
[2025-06-04 10:55:39] 2025-06-04 14:55:29,235 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:55:39] 2025-06-04 14:55:29,322 | INFO     | all job control threads have been joined
[2025-06-04 10:55:39] 2025-06-04 14:55:29,342 | INFO     | [data] control thread has finished
[2025-06-04 10:55:39] 2025-06-04 14:55:29,350 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:55:39] 2025-06-04 14:55:29,372 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:55:39] 2025-06-04 14:55:29,525 | INFO     | [payload] control thread has finished
[2025-06-04 10:55:39] 2025-06-04 14:55:29,589 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:55:39] 2025-06-04 14:55:29,796 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:55:39] 2025-06-04 14:55:30,000 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:55:39] 2025-06-04 14:55:30,048 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:55:39] 2025-06-04 14:55:30,324 | INFO     | [job] control thread has finished
[2025-06-04 10:55:39] 2025-06-04 14:55:31,378 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:55:39] 2025-06-04 14:55:34,006 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:55:39] 2025-06-04 14:55:34,075 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139746718701376)>', '<ExcThread(monitor, started 139745476732672)>']
[2025-06-04 10:55:39] 2025-06-04 14:55:34,926 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:55:39] 2025-06-04 14:55:34,927 | INFO     | [monitor] control thread has ended
[2025-06-04 10:55:39] 2025-06-04 14:55:39,078 | INFO     | all workflow threads have been joined
[2025-06-04 10:55:39] 2025-06-04 14:55:39,078 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:55:39] 2025-06-04 14:55:39,079 | INFO     | traces error code: 0
[2025-06-04 10:55:39] 2025-06-04 14:55:39,080 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:55:39] 2025-06-04 14:55:39,194 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:55:39] 2025-06-04 14:55:39,199 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:55:39] 2025-06-04 14:55:39,203 [wrapper] pilotpid: 16798
[2025-06-04 10:55:39] 2025-06-04 14:55:39,207 [wrapper] Pilot exit status: 0
[2025-06-04 10:55:39] 2025-06-04 14:55:39,224 [wrapper] pandaids: 6666948852
[2025-06-04 10:55:39] 2025-06-04 14:55:39,270 [wrapper] cleanup supervisor_pilot 21605 16799
[2025-06-04 10:55:39] 2025-06-04 14:55:39,275 [wrapper] Test setup, not cleaning
[2025-06-04 10:55:39] 2025-06-04 14:55:39,280 [wrapper] apfmon messages muted
[2025-06-04 10:55:39] 2025-06-04 14:55:39,284 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:55:39] 2025-06-04 14:55:39,288 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:55:39]  *** Error codes and diagnostics ***
[2025-06-04 10:55:39]     "exeErrorCode": 0,
[2025-06-04 10:55:39]     "exeErrorDiag": "",
[2025-06-04 10:55:39]     "pilotErrorCode": 0,
[2025-06-04 10:55:39]     "pilotErrorDiag": "",
[2025-06-04 10:55:39]  *** Listing of results directory ***
[2025-06-04 10:55:39] total 424520
[2025-06-04 10:55:39] -rw-r--r-- 1 boincer umatlas    495897 May 27 06:25 pilot3.tar.gz
[2025-06-04 10:55:39] -rw-r--r-- 1 boincer umatlas      5111 May 27 07:03 queuedata.json
[2025-06-04 10:55:39] -rwx------ 1 boincer umatlas     37140 May 27 07:06 runpilot2-wrapper.sh
[2025-06-04 10:55:39] -rw-r--r-- 1 boincer umatlas       100 Jun  4 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:55:39] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 08:21 run_atlas
[2025-06-04 10:55:39] -rw-r--r-- 1 boincer umatlas       105 Jun  4 08:21 job.xml
[2025-06-04 10:55:39] -rw-r--r-- 2 boincer umatlas 226037404 Jun  4 08:21 EVNT.44871834._002615.pool.root.1
[2025-06-04 10:55:39] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:21 start_atlas.sh
[2025-06-04 10:55:39] drwxrwx--x 2 boincer umatlas      4096 Jun  4 08:21 shared
[2025-06-04 10:55:39] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 08:21 input.tar.gz
[2025-06-04 10:55:39] -rw-r--r-- 1 boincer umatlas         0 Jun  4 08:21 boinc_lockfile
[2025-06-04 10:55:39] -rw-r--r-- 1 boincer umatlas      2556 Jun  4 08:21 pandaJob.out
[2025-06-04 10:55:39] -rw------- 1 boincer umatlas    986811 Jun  4 08:21 agis_schedconf.cvmfs.json
[2025-06-04 10:55:39] -rw------- 1 boincer umatlas   1598969 Jun  4 08:21 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:55:39] drwx------ 4 boincer umatlas      4096 Jun  4 08:21 pilot3
[2025-06-04 10:55:39] -rw------- 1 boincer umatlas 202502709 Jun  4 10:54 HITS.44871837._066413.pool.root.1
[2025-06-04 10:55:39] -rw-r--r-- 1 boincer umatlas       530 Jun  4 10:54 boinc_task_state.xml
[2025-06-04 10:55:39] -rw-r--r-- 1 boincer umatlas      5824 Jun  4 10:54 init_data.xml
[2025-06-04 10:55:39] -rw------- 1 boincer umatlas      1049 Jun  4 10:55 memory_monitor_summary.json
[2025-06-04 10:55:39] -rw------- 1 boincer umatlas    333606 Jun  4 10:55 log.44871837._066413.job.log.tgz.1
[2025-06-04 10:55:39] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:55 boinc_mmap_file
[2025-06-04 10:55:39] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:55 wrapper_checkpoint.txt
[2025-06-04 10:55:39] -rw------- 1 boincer umatlas      7746 Jun  4 10:55 heartbeat.json
[2025-06-04 10:55:39] -rw------- 1 boincer umatlas        95 Jun  4 10:55 pilot_heartbeat.json
[2025-06-04 10:55:39] -rw------- 1 boincer umatlas      4662 Jun  4 10:55 pilotlog.txt
[2025-06-04 10:55:39] -rw------- 1 boincer umatlas    838681 Jun  4 10:55 log.44871837._066413.job.log.1
[2025-06-04 10:55:39] -rw------- 1 boincer umatlas       357 Jun  4 10:55 output.list
[2025-06-04 10:55:39] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:55 runtime_log
[2025-06-04 10:55:39] -rw------- 1 boincer umatlas   1187840 Jun  4 10:55 result.tar.gz
[2025-06-04 10:55:39] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 10:55 runtime_log.err
[2025-06-04 10:55:39] -rw------- 1 boincer umatlas       659 Jun  4 10:55 4nTLDmoJ7d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbkRKDm3RNIam.diag
[2025-06-04 10:55:39] -rw-r--r-- 1 boincer umatlas     21140 Jun  4 10:55 stderr.txt
[2025-06-04 10:55:39] HITS file was successfully produced:
[2025-06-04 10:55:39] -rw------- 1 boincer umatlas 202502709 Jun  4 10:54 shared/HITS.pool.root.1
[2025-06-04 10:55:39]  *** Contents of shared directory: ***
[2025-06-04 10:55:39] total 420180
[2025-06-04 10:55:39] -rw-r--r-- 2 boincer umatlas 226037404 Jun  4 08:21 ATLAS.root_0
[2025-06-04 10:55:39] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:21 start_atlas.sh
[2025-06-04 10:55:39] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 08:21 input.tar.gz
[2025-06-04 10:55:39] -rw------- 1 boincer umatlas 202502709 Jun  4 10:54 HITS.pool.root.1
[2025-06-04 10:55:39] -rw------- 1 boincer umatlas   1187840 Jun  4 10:55 result.tar.gz
10:55:40 (13210): run_atlas exited; CPU time 68645.979806
10:55:40 (13210): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN