Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:20:57 (2322796): wrapper (7.7.26015): starting
08:20:57 (2322796): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 08:20:57] Arguments: --nthreads 10
[2025-06-04 08:20:57] Threads: 10
[2025-06-04 08:20:57] Checking for CVMFS
[2025-06-04 08:20:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:20:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:20:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:20:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:20:57] 2.12.6.0 41504 38500 482964 146780 3 143 26469779 32935936 18601 16776704 0 158604720 99.670 131759020 12841 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:20:57] CVMFS is ok
[2025-06-04 08:20:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:20:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:20:57] Further information can be found at the LHC@home message board.
[2025-06-04 08:20:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:20:57] Checking for apptainer binary...
[2025-06-04 08:20:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:20:57] Running /usr/bin/apptainer --version
[2025-06-04 08:20:57] apptainer version 1.4.1-1.el9
[2025-06-04 08:20:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:20:58] c-5-4.aglt2.org
[2025-06-04 08:20:58] apptainer works
[2025-06-04 08:20:58] Set ATHENA_PROC_NUMBER=10
[2025-06-04 08:20:58] Set ATHENA_CORE_NUMBER=10
[2025-06-04 08:20:58] Starting ATLAS job with PandaID=6678392194
[2025-06-04 08:20:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:08:37]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:08:37] 2025-06-04 14:08:16,303 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:08:37] 2025-06-04 14:08:16,306 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:08:37] 2025-06-04 14:08:16,306 | INFO     | sum of square deviations: 358956014.1333339
[2025-06-04 10:08:37] 2025-06-04 14:08:16,307 | INFO     | sum of deviations: 11615411856.399994
[2025-06-04 10:08:37] 2025-06-04 14:08:16,307 | INFO     | mean x: 1749042873.5333333
[2025-06-04 10:08:37] 2025-06-04 14:08:16,307 | INFO     | mean y: 2328394.742857143
[2025-06-04 10:08:37] 2025-06-04 14:08:16,307 | INFO     | -- intersect: -56594726761.56018
[2025-06-04 10:08:37] 2025-06-04 14:08:16,307 | INFO     | intersect: -56594726761.56018
[2025-06-04 10:08:37] 2025-06-04 14:08:16,308 | INFO     | chi2: 3.9368245284370738
[2025-06-04 10:08:37] 2025-06-04 14:08:16,308 | INFO     | sum of square deviations: 310097757.6400005
[2025-06-04 10:08:37] 2025-06-04 14:08:16,308 | INFO     | sum of deviations: 13279949465.299997
[2025-06-04 10:08:37] 2025-06-04 14:08:16,308 | INFO     | mean x: 1749042721.06
[2025-06-04 10:08:37] 2025-06-04 14:08:16,309 | INFO     | mean y: 2333475.95
[2025-06-04 10:08:37] 2025-06-04 14:08:16,309 | INFO     | -- intersect: -74900494345.50293
[2025-06-04 10:08:37] 2025-06-04 14:08:16,309 | INFO     | intersect: -74900494345.50293
[2025-06-04 10:08:37] 2025-06-04 14:08:16,309 | INFO     | chi2: 3.9174760945817337
[2025-06-04 10:08:37] 2025-06-04 14:08:16,309 | INFO     | current chi2=3.9174760945817337 (change=0.4914731077186562 %)
[2025-06-04 10:08:37] 2025-06-04 14:08:16,309 | INFO     | right removable region: 99
[2025-06-04 10:08:37] 2025-06-04 14:08:16,309 | INFO     | sum of square deviations: 310063597.6400005
[2025-06-04 10:08:37] 2025-06-04 14:08:16,310 | INFO     | sum of deviations: -11372302594.080002
[2025-06-04 10:08:37] 2025-06-04 14:08:16,310 | INFO     | mean x: 1749043026.06
[2025-06-04 10:08:37] 2025-06-04 14:08:16,310 | INFO     | mean y: 2399625.18
[2025-06-04 10:08:37] 2025-06-04 14:08:16,310 | INFO     | -- intersect: 64152614915.89503
[2025-06-04 10:08:37] 2025-06-04 14:08:16,311 | INFO     | intersect: 64152614915.89503
[2025-06-04 10:08:37] 2025-06-04 14:08:16,311 | INFO     | chi2: 1.3411044692043035
[2025-06-04 10:08:37] 2025-06-04 14:08:16,311 | INFO     | current chi2=1.3411044692043035 (change=65.93436005295557 %)
[2025-06-04 10:08:37] 2025-06-04 14:08:16,311 | INFO     | sum of square deviations: 265822430.989474
[2025-06-04 10:08:37] 2025-06-04 14:08:16,312 | INFO     | sum of deviations: -25393643298.031567
[2025-06-04 10:08:37] 2025-06-04 14:08:16,312 | INFO     | mean x: 1749043178.5894737
[2025-06-04 10:08:37] 2025-06-04 14:08:16,312 | INFO     | mean y: 2447781.7684210525
[2025-06-04 10:08:37] 2025-06-04 14:08:16,312 | INFO     | -- intersect: 167086084872.2559
[2025-06-04 10:08:37] 2025-06-04 14:08:16,312 | INFO     | intersect: 167086084872.2559
[2025-06-04 10:08:37] 2025-06-04 14:08:16,312 | INFO     | chi2: 0.26404624086449685
[2025-06-04 10:08:37] 2025-06-04 14:08:16,312 | INFO     | current chi2=0.26404624086449685 (change=80.31128469647415 %)
[2025-06-04 10:08:37] 2025-06-04 14:08:16,313 | INFO     | sum of square deviations: 226011052.09999987
[2025-06-04 10:08:37] 2025-06-04 14:08:16,313 | INFO     | sum of deviations: -24610314997.999992
[2025-06-04 10:08:37] 2025-06-04 14:08:16,313 | INFO     | mean x: 1749043331.1
[2025-06-04 10:08:37] 2025-06-04 14:08:16,313 | INFO     | mean y: 2444513.6666666665
[2025-06-04 10:08:37] 2025-06-04 14:08:16,314 | INFO     | -- intersect: 190455552552.2811
[2025-06-04 10:08:37] 2025-06-04 14:08:16,314 | INFO     | intersect: 190455552552.2811
[2025-06-04 10:08:37] 2025-06-04 14:08:16,314 | INFO     | chi2: 0.20183079841567822
[2025-06-04 10:08:37] 2025-06-04 14:08:16,314 | INFO     | current chi2=0.20183079841567822 (change=23.562328418356966 %)
[2025-06-04 10:08:37] 2025-06-04 14:08:16,314 | INFO     | left removable region: 30
[2025-06-04 10:08:37] 2025-06-04 14:08:16,314 | INFO     | sum of square deviations: 101853195.94202895
[2025-06-04 10:08:37] 2025-06-04 14:08:16,315 | INFO     | sum of deviations: -13413899219.072464
[2025-06-04 10:08:37] 2025-06-04 14:08:16,315 | INFO     | mean x: 1749043605.6376812
[2025-06-04 10:08:37] 2025-06-04 14:08:16,315 | INFO     | mean y: 2415931.797101449
[2025-06-04 10:08:37] 2025-06-04 14:08:16,315 | INFO     | -- intersect: 230348596420.23642
[2025-06-04 10:08:37] 2025-06-04 14:08:16,315 | INFO     | intersect: 230348596420.23642
[2025-06-04 10:08:37] 2025-06-04 14:08:16,315 | INFO     | chi2: 0.16889260858055502
[2025-06-04 10:08:37] 2025-06-04 14:08:16,315 | INFO     | -- intersect: 230348596420.23642
[2025-06-04 10:08:37] 2025-06-04 14:08:16,316 | INFO     | current memory leak: -131.70 B/s (using 69 data points, chi2=0.17)
[2025-06-04 10:08:37] 2025-06-04 14:08:16,316 | INFO     | ..............................
[2025-06-04 10:08:37] 2025-06-04 14:08:16,316 | INFO     | . Timing measurements:
[2025-06-04 10:08:37] 2025-06-04 14:08:16,316 | INFO     | . get job = 0 s
[2025-06-04 10:08:37] 2025-06-04 14:08:16,316 | INFO     | . initial setup = 3 s
[2025-06-04 10:08:37] 2025-06-04 14:08:16,317 | INFO     | . payload setup = 7 s
[2025-06-04 10:08:37] 2025-06-04 14:08:16,317 | INFO     | . stage-in = 0 s
[2025-06-04 10:08:37] 2025-06-04 14:08:16,317 | INFO     | . payload execution = 6389 s
[2025-06-04 10:08:37] 2025-06-04 14:08:16,317 | INFO     | . stage-out = 0 s
[2025-06-04 10:08:37] 2025-06-04 14:08:16,317 | INFO     | . log creation = 0 s
[2025-06-04 10:08:37] 2025-06-04 14:08:16,317 | INFO     | ..............................
[2025-06-04 10:08:37] 2025-06-04 14:08:16,424 | INFO     | 
[2025-06-04 10:08:37] 2025-06-04 14:08:16,425 | INFO     | job summary report
[2025-06-04 10:08:37] 2025-06-04 14:08:16,425 | INFO     | --------------------------------------------------
[2025-06-04 10:08:37] 2025-06-04 14:08:16,425 | INFO     | PanDA job id: 6678392194
[2025-06-04 10:08:37] 2025-06-04 14:08:16,425 | INFO     | task id: 45006595
[2025-06-04 10:08:37] 2025-06-04 14:08:16,425 | INFO     | errors: (none)
[2025-06-04 10:08:37] 2025-06-04 14:08:16,425 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:08:37] 2025-06-04 14:08:16,425 | INFO     | pilot state: finished 
[2025-06-04 10:08:37] 2025-06-04 14:08:16,425 | INFO     | transexitcode: 0
[2025-06-04 10:08:37] 2025-06-04 14:08:16,426 | INFO     | exeerrorcode: 0
[2025-06-04 10:08:37] 2025-06-04 14:08:16,426 | INFO     | exeerrordiag: 
[2025-06-04 10:08:37] 2025-06-04 14:08:16,426 | INFO     | exitcode: 0
[2025-06-04 10:08:37] 2025-06-04 14:08:16,426 | INFO     | exitmsg: OK
[2025-06-04 10:08:37] 2025-06-04 14:08:16,426 | INFO     | cpuconsumptiontime: 41508 s
[2025-06-04 10:08:37] 2025-06-04 14:08:16,426 | INFO     | nevents: 400
[2025-06-04 10:08:37] 2025-06-04 14:08:16,426 | INFO     | neventsw: 0
[2025-06-04 10:08:37] 2025-06-04 14:08:16,426 | INFO     | pid: 2337694
[2025-06-04 10:08:37] 2025-06-04 14:08:16,426 | INFO     | pgrp: 2337694
[2025-06-04 10:08:37] 2025-06-04 14:08:16,426 | INFO     | corecount: 10
[2025-06-04 10:08:37] 2025-06-04 14:08:16,426 | INFO     | event service: False
[2025-06-04 10:08:37] 2025-06-04 14:08:16,427 | INFO     | sizes: {0: 2397115, 1: 2397370, 6: 2397576, 12: 2397604, 6400: 2424554, 6402: 2433495, 6405: 2433679, 6410: 2433849}
[2025-06-04 10:08:37] 2025-06-04 14:08:16,427 | INFO     | --------------------------------------------------
[2025-06-04 10:08:37] 2025-06-04 14:08:16,427 | INFO     | 
[2025-06-04 10:08:37] 2025-06-04 14:08:16,427 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 10:08:37] 2025-06-04 14:08:16,446 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:08:37] 2025-06-04 14:08:16,446 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:08:37] 2025-06-04 14:08:16,446 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:08:37] 2025-06-04 14:08:16,446 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:08:37] 2025-06-04 14:08:16,446 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:08:37] 2025-06-04 14:08:16,447 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:08:37] 2025-06-04 14:08:16,447 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:08:37] 2025-06-04 14:08:16,447 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:08:37] 2025-06-04 14:08:16,447 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:08:37] 2025-06-04 14:08:16,447 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:08:37] 2025-06-04 14:08:16,447 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:08:37] 2025-06-04 14:08:16,447 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:08:37] 2025-06-04 14:08:16,447 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:08:37] 2025-06-04 14:08:16,447 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:08:37] 2025-06-04 14:08:16,447 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:08:37] 2025-06-04 14:08:16,447 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:08:37] 2025-06-04 14:08:16,448 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:08:37] 2025-06-04 14:08:16,448 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:08:37] 2025-06-04 14:08:16,448 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:08:37] 2025-06-04 14:08:16,448 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:08:37] 2025-06-04 14:08:16,448 | INFO     | job 6678392194 has completed (purged errors)
[2025-06-04 10:08:37] 2025-06-04 14:08:16,448 | INFO     | overall cleanup function is called
[2025-06-04 10:08:37] 2025-06-04 14:08:17,456 | INFO     | --- collectZombieJob: --- 10, [2337694]
[2025-06-04 10:08:37] 2025-06-04 14:08:17,456 | INFO     | zombie collector waiting for pid 2337694
[2025-06-04 10:08:37] 2025-06-04 14:08:17,457 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:08:37] 2025-06-04 14:08:17,457 | INFO     | collected zombie processes
[2025-06-04 10:08:37] 2025-06-04 14:08:17,457 | INFO     | will attempt to kill all subprocesses of pid=2337694
[2025-06-04 10:08:37] 2025-06-04 14:08:18,034 | INFO     | process IDs to be killed: [2337694] (in reverse order)
[2025-06-04 10:08:37] 2025-06-04 14:08:18,140 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:08:37] 2025-06-04 14:08:18,140 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:08:37] 2025-06-04 14:08:18,180 | INFO     | did not find any defunct processes belonging to 2337694
[2025-06-04 10:08:37] 2025-06-04 14:08:18,218 | INFO     | did not find any defunct processes belonging to 2337694
[2025-06-04 10:08:37] 2025-06-04 14:08:18,218 | INFO     | ready for new job
[2025-06-04 10:08:37] 2025-06-04 14:08:18,218 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:08:37] 2025-06-04 14:08:18,220 | INFO     | **************************************
[2025-06-04 10:08:37] 2025-06-04 14:08:18,221 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:08:37] 2025-06-04 14:08:18,221 | INFO     | **************************************
[2025-06-04 10:08:37] 2025-06-04 14:08:18,221 | INFO     | 
[2025-06-04 10:08:37] 2025-06-04 14:08:18,235 | INFO     | architecture information:
[2025-06-04 10:08:37] 2025-06-04 14:08:18,236 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:08:37] 2025-06-04 14:08:18,250 | INFO     | cat /etc/os-release:
[2025-06-04 10:08:37] NAME="CentOS Linux"
[2025-06-04 10:08:37] VERSION="7 (Core)"
[2025-06-04 10:08:37] ID="centos"
[2025-06-04 10:08:37] ID_LIKE="rhel fedora"
[2025-06-04 10:08:37] VERSION_ID="7"
[2025-06-04 10:08:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:08:37] ANSI_COLOR="0;31"
[2025-06-04 10:08:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:08:37] HOME_URL="https://www.centos.org/"
[2025-06-04 10:08:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:08:37] 
[2025-06-04 10:08:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:08:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:08:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:08:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:08:37] 
[2025-06-04 10:08:37] 2025-06-04 14:08:18,250 | INFO     | **************************************
[2025-06-04 10:08:37] 2025-06-04 14:08:18,339 | INFO     | PID=2329271 has CPU usage=14.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 10:08:37] 2025-06-04 14:08:18,340 | INFO     | .. there are 33 such processes running
[2025-06-04 10:08:37] 2025-06-04 14:08:18,753 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:08:37] 2025-06-04 14:08:18,771 | INFO     | sufficient remaining disk space (76605816832 B)
[2025-06-04 10:08:37] 2025-06-04 14:08:18,771 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:08:37] 2025-06-04 14:08:18,771 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:08:37] 2025-06-04 14:08:18,772 | INFO     | update_server=False
[2025-06-04 10:08:37] 2025-06-04 14:08:18,772 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:08:37] 2025-06-04 14:08:18,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:08:37] 2025-06-04 14:08:18,772 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:08:37] 2025-06-04 14:08:18,772 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:08:37] 2025-06-04 14:08:18,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:08:37] 2025-06-04 14:08:18,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:08:37] 2025-06-04 14:08:18,867 | INFO     | all data control threads have been joined
[2025-06-04 10:08:37] 2025-06-04 14:08:18,879 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 10:08:37] 2025-06-04 14:08:18,879 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 10:08:37] 2025-06-04 14:08:18,879 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:08:37] 2025-06-04 14:08:18,879 | INFO     | will abort loop
[2025-06-04 10:08:37] 2025-06-04 14:08:19,777 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:08:37] 2025-06-04 14:08:19,782 | INFO     | all payload control threads have been joined
[2025-06-04 10:08:37] 2025-06-04 14:08:19,788 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:08:37] 2025-06-04 14:08:19,790 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:08:37] 2025-06-04 14:08:19,873 | INFO     | [data] control thread has finished
[2025-06-04 10:08:37] 2025-06-04 14:08:19,884 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:08:37] 2025-06-04 14:08:19,989 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:08:37] 2025-06-04 14:08:20,270 | INFO     | all job control threads have been joined
[2025-06-04 10:08:37] 2025-06-04 14:08:20,510 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:08:37] 2025-06-04 14:08:20,581 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:08:37] 2025-06-04 14:08:20,758 | INFO     | [job] validate thread has finished
[2025-06-04 10:08:37] 2025-06-04 14:08:20,777 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:08:37] 2025-06-04 14:08:20,787 | INFO     | [payload] control thread has finished
[2025-06-04 10:08:37] 2025-06-04 14:08:20,939 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:08:37] 2025-06-04 14:08:21,275 | INFO     | [job] control thread has finished
[2025-06-04 10:08:37] 2025-06-04 14:08:21,435 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:08:37] 2025-06-04 14:08:21,871 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:08:37] 2025-06-04 14:08:22,440 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:08:37] 2025-06-04 14:08:25,877 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:08:37] 2025-06-04 14:08:29,742 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:08:37] 2025-06-04 14:08:30,748 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:08:37] 2025-06-04 14:08:31,831 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140199078586176)>', '<ExcThread(monitor, started 140197991802624)>']
[2025-06-04 10:08:37] 2025-06-04 14:08:31,838 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:08:37] 2025-06-04 14:08:31,838 | INFO     | [monitor] control thread has ended
[2025-06-04 10:08:37] 2025-06-04 14:08:36,857 | INFO     | all workflow threads have been joined
[2025-06-04 10:08:37] 2025-06-04 14:08:36,857 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:08:37] 2025-06-04 14:08:36,858 | INFO     | traces error code: 0
[2025-06-04 10:08:37] 2025-06-04 14:08:36,858 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:08:37] 2025-06-04 14:08:37,017 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:08:37] 2025-06-04 14:08:37,020 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:08:37] 2025-06-04 14:08:37,023 [wrapper] pilotpid: 2329271
[2025-06-04 10:08:37] 2025-06-04 14:08:37,027 [wrapper] Pilot exit status: 0
[2025-06-04 10:08:37] 2025-06-04 14:08:37,039 [wrapper] pandaids: 6678392194
[2025-06-04 10:08:37] 2025-06-04 14:08:37,109 [wrapper] cleanup supervisor_pilot 3010044 2329272
[2025-06-04 10:08:37] 2025-06-04 14:08:37,112 [wrapper] Test setup, not cleaning
[2025-06-04 10:08:37] 2025-06-04 14:08:37,116 [wrapper] apfmon messages muted
[2025-06-04 10:08:37] 2025-06-04 14:08:37,119 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:08:37] 2025-06-04 14:08:37,123 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:08:37]  *** Error codes and diagnostics ***
[2025-06-04 10:08:37]     "exeErrorCode": 0,
[2025-06-04 10:08:37]     "exeErrorDiag": "",
[2025-06-04 10:08:37]     "pilotErrorCode": 0,
[2025-06-04 10:08:37]     "pilotErrorDiag": "",
[2025-06-04 10:08:37]  *** Listing of results directory ***
[2025-06-04 10:08:37] total 388024
[2025-06-04 10:08:37] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 10:08:37] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:39 queuedata.json
[2025-06-04 10:08:37] -rwx------. 1 boincer umatlas     37140 Jun  4 03:40 runpilot2-wrapper.sh
[2025-06-04 10:08:37] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:08:37] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:20 run_atlas
[2025-06-04 10:08:37] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:20 job.xml
[2025-06-04 10:08:37] -rw-r--r--. 2 boincer umatlas 214786920 Jun  4 08:20 EVNT.45006593._002209.pool.root.1
[2025-06-04 10:08:37] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:20 start_atlas.sh
[2025-06-04 10:08:37] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:20 shared
[2025-06-04 10:08:37] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 08:20 input.tar.gz
[2025-06-04 10:08:37] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:20 boinc_lockfile
[2025-06-04 10:08:37] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 08:20 pandaJob.out
[2025-06-04 10:08:37] -rw-------. 1 boincer umatlas    986811 Jun  4 08:21 agis_schedconf.cvmfs.json
[2025-06-04 10:08:37] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:21 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:08:37] drwx------. 4 boincer umatlas      4096 Jun  4 08:21 pilot3
[2025-06-04 10:08:37] -rw-r--r--. 1 boincer umatlas      6656 Jun  4 10:02 init_data.xml
[2025-06-04 10:08:37] -rw-------. 1 boincer umatlas 176788266 Jun  4 10:07 HITS.45006595._055223.pool.root.1
[2025-06-04 10:08:37] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:07 boinc_task_state.xml
[2025-06-04 10:08:37] -rw-------. 1 boincer umatlas      1042 Jun  4 10:08 memory_monitor_summary.json
[2025-06-04 10:08:37] -rw-------. 1 boincer umatlas        95 Jun  4 10:08 pilot_heartbeat.json
[2025-06-04 10:08:37] -rw-------. 1 boincer umatlas    366760 Jun  4 10:08 log.45006595._055223.job.log.tgz.1
[2025-06-04 10:08:37] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:08 wrapper_checkpoint.txt
[2025-06-04 10:08:37] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:08 boinc_mmap_file
[2025-06-04 10:08:37] -rw-------. 1 boincer umatlas      7720 Jun  4 10:08 heartbeat.json
[2025-06-04 10:08:37] -rw-------. 1 boincer umatlas      5130 Jun  4 10:08 pilotlog.txt
[2025-06-04 10:08:37] -rw-------. 1 boincer umatlas    601663 Jun  4 10:08 log.45006595._055223.job.log.1
[2025-06-04 10:08:37] -rw-------. 1 boincer umatlas       357 Jun  4 10:08 output.list
[2025-06-04 10:08:37] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:08 runtime_log
[2025-06-04 10:08:37] -rw-------. 1 boincer umatlas    983040 Jun  4 10:08 result.tar.gz
[2025-06-04 10:08:37] -rw-r--r--. 1 boincer umatlas      8646 Jun  4 10:08 runtime_log.err
[2025-06-04 10:08:37] -rw-------. 1 boincer umatlas       650 Jun  4 10:08 jcjNDmNuxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3gnKDmcAxMXo.diag
[2025-06-04 10:08:37] -rw-r--r--. 1 boincer umatlas     21001 Jun  4 10:08 stderr.txt
[2025-06-04 10:08:37] HITS file was successfully produced:
[2025-06-04 10:08:37] -rw-------. 1 boincer umatlas 176788266 Jun  4 10:07 shared/HITS.pool.root.1
[2025-06-04 10:08:37]  *** Contents of shared directory: ***
[2025-06-04 10:08:37] total 383884
[2025-06-04 10:08:37] -rw-r--r--. 2 boincer umatlas 214786920 Jun  4 08:20 ATLAS.root_0
[2025-06-04 10:08:37] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:20 start_atlas.sh
[2025-06-04 10:08:37] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 08:20 input.tar.gz
[2025-06-04 10:08:37] -rw-------. 1 boincer umatlas 176788266 Jun  4 10:07 HITS.pool.root.1
[2025-06-04 10:08:37] -rw-------. 1 boincer umatlas    983040 Jun  4 10:08 result.tar.gz
10:08:38 (2322796): run_atlas exited; CPU time 41698.204676
10:08:38 (2322796): called boinc_finish(0)

</stderr_txt>
]]>

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