Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:06:07 (24199): wrapper (7.7.26015): starting
22:06:07 (24199): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 22:06:07] Arguments: --nthreads 8
[2025-06-04 22:06:07] Threads: 8
[2025-06-04 22:06:07] Checking for CVMFS
[2025-06-04 22:06:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:06:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:06:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:06:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:06:09] 2.11.2.0 20975 33847 95408 146792 0 158 12751009 25165824 3572 130560 0 17443242 99.749 20472970 2203 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 22:06:09] CVMFS is ok
[2025-06-04 22:06:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:06:09] Checking for apptainer binary...
[2025-06-04 22:06:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:06:09] Running /usr/bin/apptainer --version
[2025-06-04 22:06:09] apptainer version 1.3.2-1.el7
[2025-06-04 22:06:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:06:22] cg-vwn213.simple-grid.lan
[2025-06-04 22:06:22] apptainer works
[2025-06-04 22:06:22] Set ATHENA_PROC_NUMBER=8
[2025-06-04 22:06:22] Set ATHENA_CORE_NUMBER=8
[2025-06-04 22:06:22] Starting ATLAS job with PandaID=6678392191
[2025-06-04 22:06:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:51:10]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:51:10] 2025-06-04 23:50:44,075 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:51:10] 2025-06-04 23:50:44,076 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:51:10] 2025-06-04 23:50:44,076 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:51:10] 2025-06-04 23:50:44,076 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:51:10] 2025-06-04 23:50:44,081 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:51:10] 2025-06-04 23:50:44,081 | INFO     | sum of square deviations: 3256879670.0
[2025-06-05 01:51:10] 2025-06-04 23:50:44,083 | INFO     | sum of deviations: 23425395985.0
[2025-06-05 01:51:10] 2025-06-04 23:50:44,083 | INFO     | mean x: 1749074317.0
[2025-06-05 01:51:10] 2025-06-04 23:50:44,083 | INFO     | mean y: 2456235.1369863013
[2025-06-05 01:51:10] 2025-06-04 23:50:44,084 | INFO     | -- intersect: -12577915972.141527
[2025-06-05 01:51:10] 2025-06-04 23:50:44,084 | INFO     | intersect: -12577915972.141527
[2025-06-05 01:51:10] 2025-06-04 23:50:44,084 | INFO     | chi2: 2.42882691766139
[2025-06-05 01:51:10] 2025-06-04 23:50:44,084 | INFO     | sum of square deviations: 3038856977.5
[2025-06-05 01:51:10] 2025-06-04 23:50:44,086 | INFO     | sum of deviations: 36911481738.0
[2025-06-05 01:51:10] 2025-06-04 23:50:44,086 | INFO     | mean x: 1749074164.5
[2025-06-05 01:51:10] 2025-06-04 23:50:44,086 | INFO     | mean y: 2465480.542056075
[2025-06-05 01:51:10] 2025-06-04 23:50:44,086 | INFO     | -- intersect: -21242667001.62635
[2025-06-05 01:51:10] 2025-06-04 23:50:44,087 | INFO     | intersect: -21242667001.62635
[2025-06-05 01:51:10] 2025-06-04 23:50:44,087 | INFO     | chi2: 1.6557068862943969
[2025-06-05 01:51:10] 2025-06-04 23:50:44,087 | INFO     | current chi2=1.6557068862943969 (change=31.831005566728326 %)
[2025-06-05 01:51:10] 2025-06-04 23:50:44,087 | INFO     | sum of square deviations: 2830787960.0
[2025-06-05 01:51:10] 2025-06-04 23:50:44,089 | INFO     | sum of deviations: 35649152679.0
[2025-06-05 01:51:10] 2025-06-04 23:50:44,089 | INFO     | mean x: 1749074012.0
[2025-06-05 01:51:10] 2025-06-04 23:50:44,089 | INFO     | mean y: 2464555.1818181816
[2025-06-05 01:51:10] 2025-06-04 23:50:44,089 | INFO     | -- intersect: -22024267005.686867
[2025-06-05 01:51:10] 2025-06-04 23:50:44,089 | INFO     | intersect: -22024267005.686867
[2025-06-05 01:51:10] 2025-06-04 23:50:44,090 | INFO     | chi2: 1.656758502378493
[2025-06-05 01:51:10] 2025-06-04 23:50:44,090 | INFO     | current chi2=1.656758502378493 (change=-0.06351462887550685 %)
[2025-06-05 01:51:10] 2025-06-04 23:50:44,090 | INFO     | right removable region: 208
[2025-06-05 01:51:10] 2025-06-04 23:50:44,090 | INFO     | sum of square deviations: 3038856977.5
[2025-06-05 01:51:10] 2025-06-04 23:50:44,092 | INFO     | sum of deviations: -13930846086.000002
[2025-06-05 01:51:10] 2025-06-04 23:50:44,093 | INFO     | mean x: 1749074469.5
[2025-06-05 01:51:10] 2025-06-04 23:50:44,093 | INFO     | mean y: 2482134.542056075
[2025-06-05 01:51:10] 2025-06-04 23:50:44,093 | INFO     | -- intersect: 8020657194.429884
[2025-06-05 01:51:10] 2025-06-04 23:50:44,093 | INFO     | intersect: 8020657194.429884
[2025-06-05 01:51:10] 2025-06-04 23:50:44,093 | INFO     | chi2: 0.8370960374210843
[2025-06-05 01:51:10] 2025-06-04 23:50:44,093 | INFO     | current chi2=0.8370960374210843 (change=65.53496540514764 %)
[2025-06-05 01:51:10] 2025-06-04 23:50:44,094 | INFO     | sum of square deviations: 2830787960.0
[2025-06-05 01:51:10] 2025-06-04 23:50:44,095 | INFO     | sum of deviations: -8765646014.999998
[2025-06-05 01:51:10] 2025-06-04 23:50:44,096 | INFO     | mean x: 1749074622.0
[2025-06-05 01:51:10] 2025-06-04 23:50:44,096 | INFO     | mean y: 2478319.9186602873
[2025-06-05 01:51:10] 2025-06-04 23:50:44,096 | INFO     | -- intersect: 5418556530.97334
[2025-06-05 01:51:10] 2025-06-04 23:50:44,096 | INFO     | intersect: 5418556530.97334
[2025-06-05 01:51:10] 2025-06-04 23:50:44,096 | INFO     | chi2: 0.8078698214770581
[2025-06-05 01:51:10] 2025-06-04 23:50:44,096 | INFO     | current chi2=0.8078698214770581 (change=3.4913814708842703 %)
[2025-06-05 01:51:10] 2025-06-04 23:50:44,096 | INFO     | left removable region: 20
[2025-06-05 01:51:10] 2025-06-04 23:50:44,097 | INFO     | sum of square deviations: 2060343747.0
[2025-06-05 01:51:10] 2025-06-04 23:50:44,098 | INFO     | sum of deviations: 3146070425.0000005
[2025-06-05 01:51:10] 2025-06-04 23:50:44,098 | INFO     | mean x: 1749074591.5
[2025-06-05 01:51:10] 2025-06-04 23:50:44,098 | INFO     | mean y: 2489101.4468085105
[2025-06-05 01:51:10] 2025-06-04 23:50:44,098 | INFO     | -- intersect: -2668284574.765925
[2025-06-05 01:51:10] 2025-06-04 23:50:44,099 | INFO     | intersect: -2668284574.765925
[2025-06-05 01:51:10] 2025-06-04 23:50:44,099 | INFO     | chi2: 0.00044140246438682525
[2025-06-05 01:51:10] 2025-06-04 23:50:44,099 | INFO     | -- intersect: -2668284574.765925
[2025-06-05 01:51:10] 2025-06-04 23:50:44,099 | INFO     | current memory leak: 1.53 B/s (using 188 data points, chi2=0.00)
[2025-06-05 01:51:10] 2025-06-04 23:50:44,100 | INFO     | ..............................
[2025-06-05 01:51:10] 2025-06-04 23:50:44,100 | INFO     | . Timing measurements:
[2025-06-05 01:51:10] 2025-06-04 23:50:44,100 | INFO     | . get job = 0 s
[2025-06-05 01:51:10] 2025-06-04 23:50:44,100 | INFO     | . initial setup = 2 s
[2025-06-05 01:51:10] 2025-06-04 23:50:44,100 | INFO     | . payload setup = 13 s
[2025-06-05 01:51:10] 2025-06-04 23:50:44,100 | INFO     | . stage-in = 0 s
[2025-06-05 01:51:10] 2025-06-04 23:50:44,100 | INFO     | . payload execution = 13325 s
[2025-06-05 01:51:10] 2025-06-04 23:50:44,101 | INFO     | . stage-out = 3 s
[2025-06-05 01:51:10] 2025-06-04 23:50:44,101 | INFO     | . log creation = 1 s
[2025-06-05 01:51:10] 2025-06-04 23:50:44,101 | INFO     | ..............................
[2025-06-05 01:51:10] 2025-06-04 23:50:44,318 | INFO     | 
[2025-06-05 01:51:10] 2025-06-04 23:50:44,318 | INFO     | job summary report
[2025-06-05 01:51:10] 2025-06-04 23:50:44,318 | INFO     | --------------------------------------------------
[2025-06-05 01:51:10] 2025-06-04 23:50:44,318 | INFO     | PanDA job id: 6678392191
[2025-06-05 01:51:10] 2025-06-04 23:50:44,318 | INFO     | task id: 45006595
[2025-06-05 01:51:10] 2025-06-04 23:50:44,318 | INFO     | errors: (none)
[2025-06-05 01:51:10] 2025-06-04 23:50:44,319 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:51:10] 2025-06-04 23:50:44,319 | INFO     | pilot state: finished 
[2025-06-05 01:51:10] 2025-06-04 23:50:44,319 | INFO     | transexitcode: 0
[2025-06-05 01:51:10] 2025-06-04 23:50:44,319 | INFO     | exeerrorcode: 0
[2025-06-05 01:51:10] 2025-06-04 23:50:44,319 | INFO     | exeerrordiag: 
[2025-06-05 01:51:10] 2025-06-04 23:50:44,319 | INFO     | exitcode: 0
[2025-06-05 01:51:10] 2025-06-04 23:50:44,319 | INFO     | exitmsg: OK
[2025-06-05 01:51:10] 2025-06-04 23:50:44,319 | INFO     | cpuconsumptiontime: 51164 s
[2025-06-05 01:51:10] 2025-06-04 23:50:44,319 | INFO     | nevents: 400
[2025-06-05 01:51:10] 2025-06-04 23:50:44,320 | INFO     | neventsw: 0
[2025-06-05 01:51:10] 2025-06-04 23:50:44,320 | INFO     | pid: 4067
[2025-06-05 01:51:10] 2025-06-04 23:50:44,320 | INFO     | pgrp: 4067
[2025-06-05 01:51:10] 2025-06-04 23:50:44,320 | INFO     | corecount: 8
[2025-06-05 01:51:10] 2025-06-04 23:50:44,320 | INFO     | event service: False
[2025-06-05 01:51:10] 2025-06-04 23:50:44,320 | INFO     | sizes: {0: 2397171, 1: 2397370, 12: 2397370, 13: 2397604, 23: 2397660, 13342: 2427275, 13343: 2427402, 13346: 2436399, 13347: 2436455, 13410: 2436625}
[2025-06-05 01:51:10] 2025-06-04 23:50:44,320 | INFO     | --------------------------------------------------
[2025-06-05 01:51:10] 2025-06-04 23:50:44,320 | INFO     | 
[2025-06-05 01:51:10] 2025-06-04 23:50:44,320 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-05 01:51:10] 2025-06-04 23:50:44,644 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:51:10] 2025-06-04 23:50:44,645 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:51:10] 2025-06-04 23:50:44,645 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:51:10] 2025-06-04 23:50:44,645 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:51:10] 2025-06-04 23:50:44,645 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:51:10] 2025-06-04 23:50:44,645 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:51:10] 2025-06-04 23:50:44,645 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:51:10] 2025-06-04 23:50:44,646 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:51:10] 2025-06-04 23:50:44,646 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:51:10] 2025-06-04 23:50:44,646 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:51:10] 2025-06-04 23:50:44,646 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:51:10] 2025-06-04 23:50:44,646 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:51:10] 2025-06-04 23:50:44,646 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:51:10] 2025-06-04 23:50:44,646 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:51:10] 2025-06-04 23:50:44,646 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:51:10] 2025-06-04 23:50:44,646 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:51:10] 2025-06-04 23:50:44,647 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:51:10] 2025-06-04 23:50:44,647 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:51:10] 2025-06-04 23:50:44,647 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:51:10] 2025-06-04 23:50:44,647 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:51:10] 2025-06-04 23:50:44,647 | INFO     | job 6678392191 has completed (purged errors)
[2025-06-05 01:51:10] 2025-06-04 23:50:44,647 | INFO     | overall cleanup function is called
[2025-06-05 01:51:10] 2025-06-04 23:50:45,657 | INFO     | --- collectZombieJob: --- 10, [4067]
[2025-06-05 01:51:10] 2025-06-04 23:50:45,657 | INFO     | zombie collector waiting for pid 4067
[2025-06-05 01:51:10] 2025-06-04 23:50:45,657 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:51:10] 2025-06-04 23:50:45,657 | INFO     | collected zombie processes
[2025-06-05 01:51:10] 2025-06-04 23:50:45,658 | INFO     | will attempt to kill all subprocesses of pid=4067
[2025-06-05 01:51:10] 2025-06-04 23:50:45,804 | INFO     | process IDs to be killed: [4067] (in reverse order)
[2025-06-05 01:51:10] 2025-06-04 23:50:46,120 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:51:10] 2025-06-04 23:50:46,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:51:10] 2025-06-04 23:50:46,124 | INFO     | did not find any defunct processes belonging to 4067
[2025-06-05 01:51:10] 2025-06-04 23:50:46,128 | INFO     | did not find any defunct processes belonging to 4067
[2025-06-05 01:51:10] 2025-06-04 23:50:46,129 | INFO     | ready for new job
[2025-06-05 01:51:10] 2025-06-04 23:50:46,129 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:51:10] 2025-06-04 23:50:46,131 | INFO     | **************************************
[2025-06-05 01:51:10] 2025-06-04 23:50:46,131 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:51:10] 2025-06-04 23:50:46,131 | INFO     | **************************************
[2025-06-05 01:51:10] 2025-06-04 23:50:46,131 | INFO     | 
[2025-06-05 01:51:10] 2025-06-04 23:50:46,132 | INFO     | pilot is running in a VM
[2025-06-05 01:51:10] 2025-06-04 23:50:46,132 | INFO     | architecture information:
[2025-06-05 01:51:10] 2025-06-04 23:50:46,133 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:51:10] 2025-06-04 23:50:46,235 | INFO     | cat /etc/os-release:
[2025-06-05 01:51:10] NAME="CentOS Linux"
[2025-06-05 01:51:10] VERSION="7 (Core)"
[2025-06-05 01:51:10] ID="centos"
[2025-06-05 01:51:10] ID_LIKE="rhel fedora"
[2025-06-05 01:51:10] VERSION_ID="7"
[2025-06-05 01:51:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:51:10] ANSI_COLOR="0;31"
[2025-06-05 01:51:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:51:10] HOME_URL="https://www.centos.org/"
[2025-06-05 01:51:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:51:10] 
[2025-06-05 01:51:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:51:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:51:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:51:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:51:10] 
[2025-06-05 01:51:10] 2025-06-04 23:50:46,236 | INFO     | **************************************
[2025-06-05 01:51:10] 2025-06-04 23:50:46,739 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-05 01:51:10] 2025-06-04 23:50:47,014 | INFO     | sufficient remaining disk space (497319673856 B)
[2025-06-05 01:51:10] 2025-06-04 23:50:47,014 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:51:10] 2025-06-04 23:50:47,015 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:51:10] 2025-06-04 23:50:47,015 | INFO     | update_server=False
[2025-06-05 01:51:10] 2025-06-04 23:50:47,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:51:10] 2025-06-04 23:50:47,016 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 01:51:10] 2025-06-04 23:50:47,016 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:51:10] 2025-06-04 23:50:47,017 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:51:10] 2025-06-04 23:50:47,017 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:51:10] 2025-06-04 23:50:47,024 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:51:10] 2025-06-04 23:50:47,193 | INFO     | all data control threads have been joined
[2025-06-05 01:51:10] 2025-06-04 23:50:47,626 | INFO     | all job control threads have been joined
[2025-06-05 01:51:10] 2025-06-04 23:50:47,827 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:51:10] 2025-06-04 23:50:47,827 | INFO     | aborting loop
[2025-06-05 01:51:10] 2025-06-04 23:50:47,858 | INFO     | all payload control threads have been joined
[2025-06-05 01:51:10] 2025-06-04 23:50:48,026 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:51:10] 2025-06-04 23:50:48,199 | INFO     | [data] control thread has finished
[2025-06-05 01:51:10] 2025-06-04 23:50:48,603 | INFO     | [job] validate thread has finished
[2025-06-05 01:51:10] 2025-06-04 23:50:48,620 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:51:10] 2025-06-04 23:50:48,632 | INFO     | [job] control thread has finished
[2025-06-05 01:51:10] 2025-06-04 23:50:48,824 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:51:10] 2025-06-04 23:50:48,833 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:51:10] 2025-06-04 23:50:48,864 | INFO     | [payload] control thread has finished
[2025-06-05 01:51:10] 2025-06-04 23:50:48,928 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:51:10] 2025-06-04 23:50:49,032 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:51:10] 2025-06-04 23:50:49,090 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:51:10] 2025-06-04 23:50:49,134 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:51:10] 2025-06-04 23:50:49,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:51:10] 2025-06-04 23:50:49,576 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:51:10] 2025-06-04 23:50:50,257 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:51:10] 2025-06-04 23:50:50,437 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:51:10] 2025-06-04 23:50:54,446 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:51:10] 2025-06-04 23:50:57,181 | INFO     | job.realtimelogging is not enabled
[2025-06-05 01:51:10] 2025-06-04 23:50:58,187 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:51:10] 2025-06-04 23:50:59,869 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140427237451584)>', '<ExcThread(monitor, started 140426942068480)>']
[2025-06-05 01:51:10] 2025-06-04 23:51:00,091 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:51:10] 2025-06-04 23:51:00,091 | INFO     | [monitor] control thread has ended
[2025-06-05 01:51:10] 2025-06-04 23:51:04,895 | INFO     | all workflow threads have been joined
[2025-06-05 01:51:10] 2025-06-04 23:51:04,895 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:51:10] 2025-06-04 23:51:04,896 | INFO     | traces error code: 0
[2025-06-05 01:51:10] 2025-06-04 23:51:04,896 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:51:10] 2025-06-04 23:51:05,312 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:51:10] 2025-06-04 23:51:05,404 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:51:10] 2025-06-04 23:51:05,478 [wrapper] pilotpid: 27890
[2025-06-05 01:51:10] 2025-06-04 23:51:05,514 [wrapper] Pilot exit status: 0
[2025-06-05 01:51:10] 2025-06-04 23:51:05,624 [wrapper] pandaids: 6678392191
[2025-06-05 01:51:10] 2025-06-04 23:51:05,922 [wrapper] cleanup supervisor_pilot 23098 27891
[2025-06-05 01:51:10] 2025-06-04 23:51:05,938 [wrapper] Test setup, not cleaning
[2025-06-05 01:51:10] 2025-06-04 23:51:05,942 [wrapper] apfmon messages muted
[2025-06-05 01:51:10] 2025-06-04 23:51:05,948 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:51:10] 2025-06-04 23:51:05,955 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:51:10]  *** Error codes and diagnostics ***
[2025-06-05 01:51:10]     "exeErrorCode": 0,
[2025-06-05 01:51:10]     "exeErrorDiag": "",
[2025-06-05 01:51:10]     "pilotErrorCode": 0,
[2025-06-05 01:51:10]     "pilotErrorDiag": "",
[2025-06-05 01:51:10]  *** Listing of results directory ***
[2025-06-05 01:51:10] total 389028
[2025-06-05 01:51:10] -rw-r--r--. 1 boinc boinc    495897 Jun  4 09:34 pilot3.tar.gz
[2025-06-05 01:51:10] -rw-r--r--. 1 boinc boinc      5111 Jun  4 09:39 queuedata.json
[2025-06-05 01:51:10] -rwx------. 1 boinc boinc     37140 Jun  4 09:40 runpilot2-wrapper.sh
[2025-06-05 01:51:10] -rw-r--r--. 1 boinc boinc       100 Jun  4 22:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:51:10] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 22:06 run_atlas
[2025-06-05 01:51:10] -rw-r--r--. 1 boinc boinc       105 Jun  4 22:06 job.xml
[2025-06-05 01:51:10] -rw-r--r--. 1 boinc boinc      6391 Jun  4 22:06 init_data.xml
[2025-06-05 01:51:10] -rw-r--r--. 2 boinc boinc 214786920 Jun  4 22:06 EVNT.45006593._002209.pool.root.1
[2025-06-05 01:51:10] -rw-r--r--. 2 boinc boinc     15093 Jun  4 22:06 start_atlas.sh
[2025-06-05 01:51:10] drwxrwx--x. 2 boinc boinc        68 Jun  4 22:06 shared
[2025-06-05 01:51:10] -rw-r--r--. 2 boinc boinc    508880 Jun  4 22:06 input.tar.gz
[2025-06-05 01:51:10] -rw-r--r--. 1 boinc boinc         0 Jun  4 22:06 boinc_lockfile
[2025-06-05 01:51:10] -rw-r--r--. 1 boinc boinc      2525 Jun  4 22:06 pandaJob.out
[2025-06-05 01:51:10] -rw-------. 1 boinc boinc    991007 Jun  4 22:06 agis_schedconf.cvmfs.json
[2025-06-05 01:51:10] drwx------. 4 boinc boinc      4096 Jun  4 22:06 pilot3
[2025-06-05 01:51:10] -rw-r--r--. 1 boinc boinc       531 Jun  5 01:48 boinc_task_state.xml
[2025-06-05 01:51:10] -rw-------. 1 boinc boinc 176642036 Jun  5 01:48 HITS.45006595._055220.pool.root.1
[2025-06-05 01:51:10] -rw-------. 1 boinc boinc      1017 Jun  5 01:49 memory_monitor_summary.json
[2025-06-05 01:51:10] -rw-------. 1 boinc boinc   1598969 Jun  5 01:49 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:51:10] -rw-------. 1 boinc boinc    391015 Jun  5 01:49 log.45006595._055220.job.log.tgz.1
[2025-06-05 01:51:10] -rw-------. 1 boinc boinc        95 Jun  5 01:49 pilot_heartbeat.json
[2025-06-05 01:51:10] -rw-------. 1 boinc boinc      7686 Jun  5 01:50 heartbeat.json
[2025-06-05 01:51:10] -rw-r--r--. 1 boinc boinc      8192 Jun  5 01:50 boinc_mmap_file
[2025-06-05 01:51:10] -rw-r--r--. 1 boinc boinc        28 Jun  5 01:50 wrapper_checkpoint.txt
[2025-06-05 01:51:10] -rw-------. 1 boinc boinc      4611 Jun  5 01:51 pilotlog.txt
[2025-06-05 01:51:10] -rw-------. 1 boinc boinc   1165655 Jun  5 01:51 log.45006595._055220.job.log.1
[2025-06-05 01:51:10] -rw-------. 1 boinc boinc       357 Jun  5 01:51 output.list
[2025-06-05 01:51:10] -rw-r--r--. 1 boinc boinc       620 Jun  5 01:51 runtime_log
[2025-06-05 01:51:10] -rw-------. 1 boinc boinc   1576960 Jun  5 01:51 result.tar.gz
[2025-06-05 01:51:10] -rw-r--r--. 1 boinc boinc      8659 Jun  5 01:51 runtime_log.err
[2025-06-05 01:51:10] -rw-------. 1 boinc boinc       657 Jun  5 01:51 lffNDmNuxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0gnKDmO21iTn.diag
[2025-06-05 01:51:10] -rw-r--r--. 1 boinc boinc     20488 Jun  5 01:51 stderr.txt
[2025-06-05 01:51:10] HITS file was successfully produced:
[2025-06-05 01:51:10] -rw-------. 1 boinc boinc 176642036 Jun  5 01:48 shared/HITS.pool.root.1
[2025-06-05 01:51:10]  *** Contents of shared directory: ***
[2025-06-05 01:51:10] total 384316
[2025-06-05 01:51:10] -rw-r--r--. 2 boinc boinc 214786920 Jun  4 22:06 ATLAS.root_0
[2025-06-05 01:51:10] -rw-r--r--. 2 boinc boinc     15093 Jun  4 22:06 start_atlas.sh
[2025-06-05 01:51:10] -rw-r--r--. 2 boinc boinc    508880 Jun  4 22:06 input.tar.gz
[2025-06-05 01:51:10] -rw-------. 1 boinc boinc 176642036 Jun  5 01:48 HITS.pool.root.1
[2025-06-05 01:51:10] -rw-------. 1 boinc boinc   1576960 Jun  5 01:51 result.tar.gz
01:51:12 (24199): run_atlas exited; CPU time 51341.300889
01:51:12 (24199): called boinc_finish(0)

</stderr_txt>
]]>

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