Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:50:41 (2837654): wrapper (7.7.26015): starting
21:50:41 (2837654): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 21:50:41] Arguments: --nthreads 12
[2025-06-04 21:50:41] Threads: 12
[2025-06-04 21:50:41] Checking for CVMFS
[2025-06-04 21:50:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:50:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:50:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:50:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:50:44] 2.12.7.0 9267 7970 179012 146792 0 540 32677091 46080001 44696 130560 0 57451484 99.950 10413799 29691 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-06-04 21:50:44] CVMFS is ok
[2025-06-04 21:50:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 21:50:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 21:50:44] Further information can be found at the LHC@home message board.
[2025-06-04 21:50:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:50:44] Checking for apptainer binary...
[2025-06-04 21:50:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:50:45] Running /usr/bin/apptainer --version
[2025-06-04 21:50:45] apptainer version 1.4.1-1.el9
[2025-06-04 21:50:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:52:37] mff2103.farm.particle.cz
[2025-06-04 21:52:37] apptainer works
[2025-06-04 21:52:38] Set ATHENA_PROC_NUMBER=12
[2025-06-04 21:52:38] Set ATHENA_CORE_NUMBER=12
[2025-06-04 21:52:38] Starting ATLAS job with PandaID=6678391521
[2025-06-04 21:52:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:35:12]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:35:12] 2025-06-04 21:32:40,097 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 23:35:12] 2025-06-04 21:32:40,411 | INFO     | PID=2872693 has CPU usage=20.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 23:35:12] 2025-06-04 21:32:40,412 | INFO     | .. there are 100 such processes running
[2025-06-04 23:35:12] 2025-06-04 21:32:40,431 | INFO     | number of running child processes to parent process 2925504: 1
[2025-06-04 23:35:12] 2025-06-04 21:32:40,431 | INFO     | maximum number of monitored processes: 7
[2025-06-04 23:35:12] 2025-06-04 21:32:42,938 | INFO     | monitor loop #394: job 0:6678391521 is in state 'finished'
[2025-06-04 23:35:12] 2025-06-04 21:32:42,939 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:35:12] 2025-06-04 21:32:45,444 | INFO     | monitor loop #395: job 0:6678391521 is in state 'finished'
[2025-06-04 23:35:12] 2025-06-04 21:32:45,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:35:12] 2025-06-04 21:32:47,950 | INFO     | monitor loop #396: job 0:6678391521 is in state 'finished'
[2025-06-04 23:35:12] 2025-06-04 21:32:47,950 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:35:12] 2025-06-04 21:32:50,456 | INFO     | monitor loop #397: job 0:6678391521 is in state 'finished'
[2025-06-04 23:35:12] 2025-06-04 21:32:50,456 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:35:12] 2025-06-04 21:32:52,962 | INFO     | monitor loop #398: job 0:6678391521 is in state 'finished'
[2025-06-04 23:35:12] 2025-06-04 21:32:52,963 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:35:12] 2025-06-04 21:32:53,454 | INFO     | 5930s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 23:35:12] 2025-06-04 21:32:55,467 | INFO     | monitor loop #399: job 0:6678391521 is in state 'finished'
[2025-06-04 23:35:12] 2025-06-04 21:32:55,468 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:35:12] 2025-06-04 21:32:57,972 | INFO     | monitor loop #400: job 0:6678391521 is in state 'finished'
[2025-06-04 23:35:12] 2025-06-04 21:32:57,973 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:35:12] 2025-06-04 21:33:00,477 | INFO     | monitor loop #401: job 0:6678391521 is in state 'finished'
[2025-06-04 23:35:12] 2025-06-04 21:33:00,478 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:35:12] 2025-06-04 21:33:02,982 | INFO     | monitor loop #402: job 0:6678391521 is in state 'finished'
[2025-06-04 23:35:12] 2025-06-04 21:33:02,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:35:12] 2025-06-04 21:33:03,602 | INFO     | PID=2872693 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 23:35:12] 2025-06-04 21:33:03,602 | INFO     | .. there are 100 such processes running
[2025-06-04 23:35:12] 2025-06-04 21:33:05,487 | INFO     | monitor loop #403: job 0:6678391521 is in state 'finished'
[2025-06-04 23:35:12] 2025-06-04 21:33:05,488 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:35:12] 2025-06-04 21:33:07,992 | INFO     | monitor loop #404: job 0:6678391521 is in state 'finished'
[2025-06-04 23:35:12] 2025-06-04 21:33:07,993 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:35:12] 2025-06-04 21:33:10,497 | INFO     | monitor loop #405: job 0:6678391521 is in state 'finished'
[2025-06-04 23:35:12] 2025-06-04 21:33:10,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:35:12] 2025-06-04 21:33:13,002 | INFO     | monitor loop #406: job 0:6678391521 is in state 'finished'
[2025-06-04 23:35:12] 2025-06-04 21:33:13,003 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:35:12] 2025-06-04 21:33:15,507 | INFO     | monitor loop #407: job 0:6678391521 is in state 'finished'
[2025-06-04 23:35:12] 2025-06-04 21:33:15,508 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:35:12] 2025-06-04 21:33:18,013 | INFO     | monitor loop #408: job 0:6678391521 is in state 'finished'
[2025-06-04 23:35:12] 2025-06-04 21:33:18,014 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:35:12] 2025-06-04 21:33:18,899 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 23:35:12] 2025-06-04 21:33:18,899 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-6678391521/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 23:35:12] 2025-06-04 21:33:18,900 | INFO     | extracted standard info from prmon json
[2025-06-04 23:35:12] 2025-06-04 21:33:18,900 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 23:35:12] 2025-06-04 21:33:18,900 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 23:35:12] 2025-06-04 21:33:18,900 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 23:35:12] 2025-06-04 21:33:18,900 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:35:12] 2025-06-04 21:33:18,902 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:35:12] 2025-06-04 21:33:18,907 | INFO     | sum of square deviations: 204150419.7471262
[2025-06-04 23:35:12] 2025-06-04 21:33:18,907 | INFO     | sum of deviations: 21354774319.68965
[2025-06-04 23:35:12] 2025-06-04 21:33:18,907 | INFO     | mean x: 1749069991.1609194
[2025-06-04 23:35:12] 2025-06-04 21:33:18,907 | INFO     | mean y: 2579604.379310345
[2025-06-04 23:35:12] 2025-06-04 21:33:18,907 | INFO     | -- intersect: -182955628254.55307
[2025-06-04 23:35:12] 2025-06-04 21:33:18,907 | INFO     | intersect: -182955628254.55307
[2025-06-04 23:35:12] 2025-06-04 21:33:18,908 | INFO     | chi2: 1.5076896700634443
[2025-06-04 23:35:12] 2025-06-04 21:33:18,908 | INFO     | -- intersect: -182955628254.55307
[2025-06-04 23:35:12] 2025-06-04 21:33:18,908 | INFO     | current memory leak: 104.60 B/s (using 87 data points, chi2=1.51)
[2025-06-04 23:35:12] 2025-06-04 21:33:18,908 | INFO     | ..............................
[2025-06-04 23:35:12] 2025-06-04 21:33:18,909 | INFO     | . Timing measurements:
[2025-06-04 23:35:12] 2025-06-04 21:33:18,909 | INFO     | . get job = 0 s
[2025-06-04 23:35:12] 2025-06-04 21:33:18,909 | INFO     | . initial setup = 6 s
[2025-06-04 23:35:12] 2025-06-04 21:33:18,909 | INFO     | . payload setup = 80 s
[2025-06-04 23:35:12] 2025-06-04 21:33:18,909 | INFO     | . stage-in = 0 s
[2025-06-04 23:35:12] 2025-06-04 21:33:18,909 | INFO     | . payload execution = 5729 s
[2025-06-04 23:35:12] 2025-06-04 21:33:18,909 | INFO     | . stage-out = 1 s
[2025-06-04 23:35:12] 2025-06-04 21:33:18,909 | INFO     | . log creation = 0 s
[2025-06-04 23:35:12] 2025-06-04 21:33:18,909 | INFO     | ..............................
[2025-06-04 23:35:12] 2025-06-04 21:33:19,041 | INFO     | 
[2025-06-04 23:35:12] 2025-06-04 21:33:19,042 | INFO     | job summary report
[2025-06-04 23:35:12] 2025-06-04 21:33:19,042 | INFO     | --------------------------------------------------
[2025-06-04 23:35:12] 2025-06-04 21:33:19,042 | INFO     | PanDA job id: 6678391521
[2025-06-04 23:35:12] 2025-06-04 21:33:19,042 | INFO     | task id: 45006595
[2025-06-04 23:35:12] 2025-06-04 21:33:19,042 | INFO     | errors: (none)
[2025-06-04 23:35:12] 2025-06-04 21:33:19,042 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:35:12] 2025-06-04 21:33:19,042 | INFO     | pilot state: finished 
[2025-06-04 23:35:12] 2025-06-04 21:33:19,042 | INFO     | transexitcode: 0
[2025-06-04 23:35:12] 2025-06-04 21:33:19,042 | INFO     | exeerrorcode: 0
[2025-06-04 23:35:12] 2025-06-04 21:33:19,042 | INFO     | exeerrordiag: 
[2025-06-04 23:35:12] 2025-06-04 21:33:19,042 | INFO     | exitcode: 0
[2025-06-04 23:35:12] 2025-06-04 21:33:19,042 | INFO     | exitmsg: OK
[2025-06-04 23:35:12] 2025-06-04 21:33:19,043 | INFO     | cpuconsumptiontime: 33827 s
[2025-06-04 23:35:12] 2025-06-04 21:33:19,043 | INFO     | nevents: 400
[2025-06-04 23:35:12] 2025-06-04 21:33:19,043 | INFO     | neventsw: 0
[2025-06-04 23:35:12] 2025-06-04 21:33:19,043 | INFO     | pid: 2925504
[2025-06-04 23:35:12] 2025-06-04 21:33:19,043 | INFO     | pgrp: 2925504
[2025-06-04 23:35:12] 2025-06-04 21:33:19,043 | INFO     | corecount: 12
[2025-06-04 23:35:12] 2025-06-04 21:33:19,043 | INFO     | event service: False
[2025-06-04 23:35:12] 2025-06-04 21:33:19,043 | INFO     | sizes: {0: 2397172, 1: 2397371, 12: 2397371, 23: 2397399, 34: 2397427, 43: 2397661, 44: 2397817, 5813: 2424313, 5814: 2424312, 5816: 2433311, 5819: 2433367, 5860: 
[2025-06-04 23:35:12] 2025-06-04 21:33:19,043 | INFO     | --------------------------------------------------
[2025-06-04 23:35:12] 2025-06-04 21:33:19,043 | INFO     | 
[2025-06-04 23:35:12] 2025-06-04 21:33:19,043 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2025-06-04 23:35:12] 2025-06-04 21:33:19,273 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:35:12] 2025-06-04 21:33:19,273 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:35:12] 2025-06-04 21:33:19,273 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:35:12] 2025-06-04 21:33:19,273 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:35:12] 2025-06-04 21:33:19,274 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:35:12] 2025-06-04 21:33:19,274 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:35:12] 2025-06-04 21:33:19,274 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:35:12] 2025-06-04 21:33:19,274 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:35:12] 2025-06-04 21:33:19,274 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:35:12] 2025-06-04 21:33:19,274 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:35:12] 2025-06-04 21:33:19,274 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:35:12] 2025-06-04 21:33:19,274 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:35:12] 2025-06-04 21:33:19,274 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:35:12] 2025-06-04 21:33:19,274 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:35:12] 2025-06-04 21:33:19,274 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:35:12] 2025-06-04 21:33:19,274 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:35:12] 2025-06-04 21:33:19,274 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:35:12] 2025-06-04 21:33:19,274 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:35:12] 2025-06-04 21:33:19,274 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:35:12] 2025-06-04 21:33:19,275 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:35:12] 2025-06-04 21:33:19,275 | INFO     | job 6678391521 has completed (purged errors)
[2025-06-04 23:35:12] 2025-06-04 21:33:19,275 | INFO     | overall cleanup function is called
[2025-06-04 23:35:12] 2025-06-04 21:33:20,285 | INFO     | --- collectZombieJob: --- 10, [2925504]
[2025-06-04 23:35:12] 2025-06-04 21:33:20,286 | INFO     | zombie collector waiting for pid 2925504
[2025-06-04 23:35:12] 2025-06-04 21:33:20,286 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:35:12] 2025-06-04 21:33:20,286 | INFO     | collected zombie processes
[2025-06-04 23:35:12] 2025-06-04 21:33:20,286 | INFO     | will attempt to kill all subprocesses of pid=2925504
[2025-06-04 23:35:12] 2025-06-04 21:33:21,172 | INFO     | process IDs to be killed: [2925504] (in reverse order)
[2025-06-04 23:35:12] 2025-06-04 21:33:21,738 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:35:12] 2025-06-04 21:33:21,739 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:35:12] 2025-06-04 21:33:21,777 | INFO     | did not find any defunct processes belonging to 2925504
[2025-06-04 23:35:12] 2025-06-04 21:33:21,818 | INFO     | did not find any defunct processes belonging to 2925504
[2025-06-04 23:35:12] 2025-06-04 21:33:21,819 | INFO     | ready for new job
[2025-06-04 23:35:12] 2025-06-04 21:33:21,819 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:35:12] 2025-06-04 21:33:21,821 | INFO     | **************************************
[2025-06-04 23:35:12] 2025-06-04 21:33:21,821 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:35:12] 2025-06-04 21:33:21,821 | INFO     | **************************************
[2025-06-04 23:35:12] 2025-06-04 21:33:21,821 | INFO     | 
[2025-06-04 23:35:12] 2025-06-04 21:33:21,827 | INFO     | architecture information:
[2025-06-04 23:35:12] 2025-06-04 21:33:21,839 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:35:12] 2025-06-04 21:33:21,926 | INFO     | cat /etc/os-release:
[2025-06-04 23:35:12] NAME="CentOS Linux"
[2025-06-04 23:35:12] VERSION="7 (Core)"
[2025-06-04 23:35:12] ID="centos"
[2025-06-04 23:35:12] ID_LIKE="rhel fedora"
[2025-06-04 23:35:12] VERSION_ID="7"
[2025-06-04 23:35:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:35:12] ANSI_COLOR="0;31"
[2025-06-04 23:35:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:35:12] HOME_URL="https://www.centos.org/"
[2025-06-04 23:35:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:35:12] 
[2025-06-04 23:35:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:35:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:35:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:35:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:35:12] 
[2025-06-04 23:35:12] 2025-06-04 21:33:21,927 | INFO     | **************************************
[2025-06-04 23:35:12] 2025-06-04 21:33:22,431 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2025-06-04 23:35:12] 2025-06-04 21:33:22,574 | INFO     | sufficient remaining disk space (1677351452672 B)
[2025-06-04 23:35:12] 2025-06-04 21:33:22,574 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:35:12] 2025-06-04 21:33:22,575 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:35:12] 2025-06-04 21:33:22,575 | INFO     | update_server=False
[2025-06-04 23:35:12] 2025-06-04 21:33:22,575 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:35:12] 2025-06-04 21:33:22,575 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 23:35:12] 2025-06-04 21:33:22,575 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:35:12] 2025-06-04 21:33:22,576 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:35:12] 2025-06-04 21:33:22,576 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:35:12] 2025-06-04 21:33:22,999 | INFO     | all data control threads have been joined
[2025-06-04 23:35:12] 2025-06-04 21:33:23,039 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 23:35:12] 2025-06-04 21:33:23,040 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 23:35:12] 2025-06-04 21:33:23,040 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:35:12] 2025-06-04 21:33:23,040 | INFO     | will abort loop
[2025-06-04 23:35:12] 2025-06-04 21:33:23,172 | INFO     | all payload control threads have been joined
[2025-06-04 23:35:12] 2025-06-04 21:33:23,229 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:35:12] 2025-06-04 21:33:23,580 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:35:12] 2025-06-04 21:33:24,005 | INFO     | [data] control thread has finished
[2025-06-04 23:35:12] 2025-06-04 21:33:24,045 | INFO     | all job control threads have been joined
[2025-06-04 23:35:12] 2025-06-04 21:33:24,045 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:35:12] 2025-06-04 21:33:24,055 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:35:12] 2025-06-04 21:33:24,112 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:35:12] 2025-06-04 21:33:24,178 | INFO     | [payload] control thread has finished
[2025-06-04 23:35:12] 2025-06-04 21:33:24,304 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:35:12] 2025-06-04 21:33:24,547 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:35:12] 2025-06-04 21:33:24,777 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:35:12] 2025-06-04 21:33:24,805 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:35:12] 2025-06-04 21:33:24,867 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:35:12] 2025-06-04 21:33:25,009 | INFO     | [job] validate thread has finished
[2025-06-04 23:35:12] 2025-06-04 21:33:25,050 | INFO     | [job] control thread has finished
[2025-06-04 23:35:12] 2025-06-04 21:33:25,061 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:35:12] 2025-06-04 21:33:25,177 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:35:12] 2025-06-04 21:33:25,213 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:35:12] 2025-06-04 21:33:25,235 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:35:12] 2025-06-04 21:33:29,222 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:35:12] 2025-06-04 21:33:29,560 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139970920109888)>', '<ExcThread(monitor, started 139970274641664)>']
[2025-06-04 23:35:12] 2025-06-04 21:33:29,617 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:35:12] 2025-06-04 21:33:29,618 | INFO     | [monitor] control thread has ended
[2025-06-04 23:35:12] 2025-06-04 21:33:34,586 | INFO     | all workflow threads have been joined
[2025-06-04 23:35:12] 2025-06-04 21:33:34,587 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:35:12] 2025-06-04 21:33:34,587 | INFO     | traces error code: 0
[2025-06-04 23:35:12] 2025-06-04 21:33:34,587 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:35:12] 2025-06-04 21:33:34,894 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:35:12] 2025-06-04 21:33:34,931 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:35:12] 2025-06-04 21:33:34,973 [wrapper] pilotpid: 2872693
[2025-06-04 23:35:12] 2025-06-04 21:33:35,005 [wrapper] Pilot exit status: 0
[2025-06-04 23:35:12] 2025-06-04 21:33:35,176 [wrapper] pandaids: 6678391521
[2025-06-04 23:35:12] 2025-06-04 21:33:35,574 [wrapper] cleanup supervisor_pilot 3654685 2872694
[2025-06-04 23:35:12] 2025-06-04 21:33:35,625 [wrapper] Test setup, not cleaning
[2025-06-04 23:35:12] 2025-06-04 21:33:35,656 [wrapper] apfmon messages muted
[2025-06-04 23:35:12] 2025-06-04 21:33:35,700 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:35:12] 2025-06-04 21:33:35,729 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:35:12]  *** Error codes and diagnostics ***
[2025-06-04 23:35:12]     "exeErrorCode": 0,
[2025-06-04 23:35:12]     "exeErrorDiag": "",
[2025-06-04 23:35:12]     "pilotErrorCode": 0,
[2025-06-04 23:35:12]     "pilotErrorDiag": "",
[2025-06-04 23:35:12]  *** Listing of results directory ***
[2025-06-04 23:35:12] total 389172
[2025-06-04 23:35:12] -rw-r--r-- 1 boinc boinc    495897 Jun  4 09:04 pilot3.tar.gz
[2025-06-04 23:35:12] -rw-r--r-- 1 boinc boinc      5111 Jun  4 09:29 queuedata.json
[2025-06-04 23:35:12] -rwx------ 1 boinc boinc     37140 Jun  4 09:31 runpilot2-wrapper.sh
[2025-06-04 23:35:12] -rw-r--r-- 1 boinc boinc       100 Jun  4 21:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:35:12] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 21:50 run_atlas
[2025-06-04 23:35:12] -rw-r--r-- 1 boinc boinc       105 Jun  4 21:50 job.xml
[2025-06-04 23:35:12] -rw-r--r-- 1 boinc boinc      6664 Jun  4 21:50 init_data.xml
[2025-06-04 23:35:12] -rw-r--r-- 2 boinc boinc 215212369 Jun  4 21:50 EVNT.45006593._002196.pool.root.1
[2025-06-04 23:35:12] -rw-r--r-- 2 boinc boinc     15093 Jun  4 21:50 start_atlas.sh
[2025-06-04 23:35:12] drwxrwx--x 2 boinc boinc      4096 Jun  4 21:50 shared
[2025-06-04 23:35:12] -rw-r--r-- 2 boinc boinc    508881 Jun  4 21:50 input.tar.gz
[2025-06-04 23:35:12] -rw-r--r-- 1 boinc boinc         0 Jun  4 21:50 boinc_lockfile
[2025-06-04 23:35:12] -rw-r--r-- 1 boinc boinc      2525 Jun  4 21:52 pandaJob.out
[2025-06-04 23:35:12] -rw------- 1 boinc boinc    991007 Jun  4 21:54 agis_schedconf.cvmfs.json
[2025-06-04 23:35:12] -rw------- 1 boinc boinc   1598969 Jun  4 21:54 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:35:12] drwx------ 4 boinc boinc      4096 Jun  4 21:54 pilot3
[2025-06-04 23:35:12] -rw------- 1 boinc boinc 177698440 Jun  4 23:31 HITS.45006595._054883.pool.root.1
[2025-06-04 23:35:12] -rw-r--r-- 1 boinc boinc       529 Jun  4 23:31 boinc_task_state.xml
[2025-06-04 23:35:12] -rw------- 1 boinc boinc      1021 Jun  4 23:32 memory_monitor_summary.json
[2025-06-04 23:35:12] -rw------- 1 boinc boinc    368344 Jun  4 23:32 log.45006595._054883.job.log.tgz.1
[2025-06-04 23:35:12] -rw------- 1 boinc boinc        95 Jun  4 23:32 pilot_heartbeat.json
[2025-06-04 23:35:12] -rw------- 1 boinc boinc      7695 Jun  4 23:33 heartbeat.json
[2025-06-04 23:35:12] -rw------- 1 boinc boinc      4665 Jun  4 23:33 pilotlog.txt
[2025-06-04 23:35:12] -rw------- 1 boinc boinc    513609 Jun  4 23:33 log.45006595._054883.job.log.1
[2025-06-04 23:35:12] -rw------- 1 boinc boinc       357 Jun  4 23:33 output.list
[2025-06-04 23:35:12] -rw-r--r-- 1 boinc boinc       620 Jun  4 23:33 runtime_log
[2025-06-04 23:35:12] -rw------- 1 boinc boinc    901120 Jun  4 23:33 result.tar.gz
[2025-06-04 23:35:12] -rw-r--r-- 1 boinc boinc      8720 Jun  4 23:33 runtime_log.err
[2025-06-04 23:35:12] -rw------- 1 boinc boinc       663 Jun  4 23:33 o09KDmPmxg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmGvaKDmX2zVOn.diag
[2025-06-04 23:35:12] -rw-r--r-- 1 boinc boinc        26 Jun  4 23:35 wrapper_checkpoint.txt
[2025-06-04 23:35:12] -rw-r--r-- 1 boinc boinc      8192 Jun  4 23:35 boinc_mmap_file
[2025-06-04 23:35:12] -rw-r--r-- 1 boinc boinc     22586 Jun  4 23:35 stderr.txt
[2025-06-04 23:35:12] HITS file was successfully produced:
[2025-06-04 23:35:12] -rw------- 1 boinc boinc 177698440 Jun  4 23:31 shared/HITS.pool.root.1
[2025-06-04 23:35:12]  *** Contents of shared directory: ***
[2025-06-04 23:35:12] total 385112
[2025-06-04 23:35:12] -rw-r--r-- 2 boinc boinc 215212369 Jun  4 21:50 ATLAS.root_0
[2025-06-04 23:35:12] -rw-r--r-- 2 boinc boinc     15093 Jun  4 21:50 start_atlas.sh
[2025-06-04 23:35:12] -rw-r--r-- 2 boinc boinc    508881 Jun  4 21:50 input.tar.gz
[2025-06-04 23:35:12] -rw------- 1 boinc boinc 177698440 Jun  4 23:31 HITS.pool.root.1
[2025-06-04 23:35:12] -rw------- 1 boinc boinc    901120 Jun  4 23:33 result.tar.gz
23:35:14 (2837654): run_atlas exited; CPU time 34173.160879
23:35:14 (2837654): called boinc_finish(0)

</stderr_txt>
]]>

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