Stderr output

<core_client_version>8.2.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 14:33:01 (26696): Detected: vboxwrapper 26206
2025-06-04 14:33:01 (26696): Detected: BOINC client v8.2.1
2025-06-04 14:33:01 (26696): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-06-04 14:33:02 (26696): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 14:33:02 (26696): Create VM. (boinc_16a671d070b870a5, slot#35)
2025-06-04 14:33:03 (26696): Setting Memory Size for VM. (4096MB)
2025-06-04 14:33:03 (26696): Setting CPU Count for VM. (1)
2025-06-04 14:33:03 (26696): Setting Chipset Options for VM.
2025-06-04 14:33:03 (26696): Setting Graphics Controller Options for VM.
2025-06-04 14:33:04 (26696): Setting Boot Options for VM.
2025-06-04 14:33:04 (26696): Setting Network Configuration for NAT.
2025-06-04 14:33:04 (26696): Enabling VM Network Access.
2025-06-04 14:33:04 (26696): Disabling USB Support for VM.
2025-06-04 14:33:05 (26696): Disabling COM Port Support for VM.
2025-06-04 14:33:05 (26696): Disabling LPT Port Support for VM.
2025-06-04 14:33:05 (26696): Disabling Audio Support for VM.
2025-06-04 14:33:05 (26696): Disabling Clipboard Support for VM.
2025-06-04 14:33:06 (26696): Disabling Drag and Drop Support for VM.
2025-06-04 14:33:06 (26696): Adding storage controller(s) to VM.
2025-06-04 14:33:06 (26696): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 14:33:07 (26696): Adding VirtualBox Guest Additions to VM.
2025-06-04 14:33:07 (26696): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 14:33:07 (26696): forwarding host port 55580 to guest port 80
2025-06-04 14:33:07 (26696): Enabling remote desktop for VM.
2025-06-04 14:33:08 (26696): Required extension pack not installed, remote desktop not enabled.
2025-06-04 14:33:08 (26696): Enabling shared directory for VM.
2025-06-04 14:33:08 (26696): Starting VM using VBoxManage interface. (boinc_16a671d070b870a5, slot#35)
2025-06-04 14:33:13 (26696): Successfully started VM. (PID = '44308')
2025-06-04 14:33:13 (26696): Reporting VM Process ID to BOINC.
2025-06-04 14:33:13 (26696): Guest Log: BIOS: VirtualBox 7.1.8
2025-06-04 14:33:13 (26696): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 14:33:13 (26696): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 14:33:13 (26696): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 14:33:13 (26696): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 14:33:13 (26696): Detected: Web Application Enabled (http://localhost:55580)
2025-06-04 14:33:13 (26696): Preference change detected
2025-06-04 14:33:13 (26696): Setting CPU throttle for VM. (100%)
2025-06-04 14:33:13 (26696): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 14:33:15 (26696): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 14:33:15 (26696): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 14:33:17 (26696): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 14:33:17 (26696): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 14:33:17 (26696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 14:33:20 (26696): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 14:33:20 (26696): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 14:33:25 (26696): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 14:33:25 (26696): Guest Log: 00:00:00.000095 main     Log opened 2025-06-04T14:33:23.667912000Z
2025-06-04 14:33:25 (26696): Guest Log: 00:00:00.000203 main     OS Product: Linux
2025-06-04 14:33:25 (26696): Guest Log: 00:00:00.000222 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 14:33:25 (26696): Guest Log: 00:00:00.000236 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 14:33:25 (26696): Guest Log: 00:00:00.000249 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 14:33:25 (26696): Guest Log: 00:00:00.000249 main     Process ID: 1244
2025-06-04 14:33:25 (26696): Guest Log: 00:00:00.000250 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 14:33:25 (26696): Guest Log: 00:00:00.000859 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 14:33:25 (26696): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 14:33:25 (26696): Guest Log: [INFO] Mounting shared directory
2025-06-04 14:33:25 (26696): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 14:33:34 (26696): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 14:33:34 (26696): Guest Log: [INFO] Detected branch: prod
2025-06-04 14:33:34 (26696): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 14:33:34 (26696): Guest Log: Copying input files
2025-06-04 14:33:35 (26696): Guest Log: Copied input files into RunAtlas.
2025-06-04 14:33:35 (26696): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-06-04 14:33:35 (26696): Guest Log: 00:00:10.010972 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 682 716 000ns (GuestNow=1 749 040 414 995 515 000 ns GuestLast=1 749 047 603 678 231 000 ns fSetTimeLastLoop=true )
2025-06-04 14:33:43 (26696): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 14:33:43 (26696): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 14:33:43 (26696): Guest Log: 2.6.3.0 1517 0 31528 146780 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-06-04 14:33:43 (26696): Guest Log: copied the webapp to /var/www
2025-06-04 14:33:43 (26696): Guest Log: core_number=1
2025-06-04 14:33:43 (26696): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 14:33:43 (26696): Guest Log:  *** Starting ATLAS job. (PandaID=6678756334 taskID=45006595) ***
2025-06-04 16:13:16 (26696): Status Report: Elapsed Time: '6000.000000'
2025-06-04 16:13:16 (26696): Status Report: CPU Time: '5501.109375'
2025-06-04 17:53:18 (26696): Status Report: Elapsed Time: '12000.000000'
2025-06-04 17:53:18 (26696): Status Report: CPU Time: '11480.468750'
2025-06-04 19:33:21 (26696): Status Report: Elapsed Time: '18000.000000'
2025-06-04 19:33:21 (26696): Status Report: CPU Time: '17459.875000'
2025-06-04 21:04:16 (26696): Guest Log:  *** Job finished ***
2025-06-04 21:04:16 (26696): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:03:57,669 | INFO     | [payload] run_realtimelog thread has finished
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:03:57,970 | INFO     | [payload] validate_post thread has finished
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:03:59,820 | INFO     | [data] queue_monitor thread has finished
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:04:01,903 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139978675750720)>', '<ExcThread(monitor, started 139978369636096)>']
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:04:01,933 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:04:01,934 | INFO     | [monitor] control thread has ended
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:04:06,908 | INFO     | all workflow threads have been joined
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:04:06,908 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:04:06,908 | INFO     | traces error code: 0
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:04:06,909 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:04:06,993 [wrapper] ==== pilot stdout END ====
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:04:06,994 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:04:06,996 [wrapper] pilotpid: 5756
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:04:06,997 [wrapper] Pilot exit status: 0
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:04:07,015 [wrapper] pandaids: 6678756334
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:04:07,030 [wrapper] cleanup supervisor_pilot 31466 5757
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:04:07,033 [wrapper] Test setup, not cleaning
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:04:07,034 [wrapper] apfmon messages muted
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:04:07,036 [wrapper] ==== wrapper stdout END ====
2025-06-04 21:04:16 (26696): Guest Log: 2025-06-04 19:04:07,038 [wrapper] ==== wrapper stderr END ====
2025-06-04 21:04:16 (26696): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 21:04:16 (26696): Guest Log:     "exeErrorCode": 0,
2025-06-04 21:04:16 (26696): Guest Log:     "exeErrorDiag": "",
2025-06-04 21:04:16 (26696): Guest Log:     "pilotErrorCode": 0,
2025-06-04 21:04:16 (26696): Guest Log:     "pilotErrorDiag": "",
2025-06-04 21:04:16 (26696): Guest Log:  *** Listing of results directory ***
2025-06-04 21:04:16 (26696): Guest Log: total 184524
2025-06-04 21:04:16 (26696): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  4 07:34 pilot3.tar.gz
2025-06-04 21:04:16 (26696): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 07:51 queuedata.json
2025-06-04 21:04:16 (26696): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 07:53 runpilot2-wrapper.sh
2025-06-04 21:04:16 (26696): Guest Log: -rwxr-xr-x. 1 atlas atlas      9354 Jun  4 12:33 init_data.xml
2025-06-04 21:04:16 (26696): Guest Log: -rwxr-xr-x. 1 atlas atlas    508887 Jun  4 12:33 input.tar.gz
2025-06-04 21:04:16 (26696): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  4 12:33 start_atlas.sh
2025-06-04 21:04:16 (26696): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  4 12:33 EVNT.45006593._001015.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 21:04:16 (26696): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  4 12:33 pandaJob.out
2025-06-04 21:04:16 (26696): Guest Log: -rw-------. 1 atlas atlas    986811 Jun  4 12:33 agis_schedconf.cvmfs.json
2025-06-04 21:04:16 (26696): Guest Log: drwx------. 4 atlas atlas      4096 Jun  4 12:33 pilot3
2025-06-04 21:04:16 (26696): Guest Log: -rw-------. 1 atlas atlas 179983136 Jun  4 19:03 HITS.45006595._055555.pool.root.1
2025-06-04 21:04:16 (26696): Guest Log: -rw-------. 1 atlas atlas        95 Jun  4 19:03 pilot_heartbeat.json
2025-06-04 21:04:16 (26696): Guest Log: -rw-------. 1 atlas atlas      1025 Jun  4 19:03 memory_monitor_summary.json
2025-06-04 21:04:16 (26696): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  4 19:03 agis_ddmendpoints.agis.ALL.json
2025-06-04 21:04:16 (26696): Guest Log: -rw-------. 1 atlas atlas    385748 Jun  4 19:03 log.45006595._055555.job.log.tgz.1
2025-06-04 21:04:16 (26696): Guest Log: -rw-------. 1 atlas atlas      7673 Jun  4 19:03 heartbeat.json
2025-06-04 21:04:16 (26696): Guest Log: -rw-------. 1 atlas atlas      4599 Jun  4 19:04 pilotlog.txt
2025-06-04 21:04:16 (26696): Guest Log: -rw-------. 1 atlas atlas   2216227 Jun  4 19:04 log.45006595._055555.job.log.1
2025-06-04 21:04:16 (26696): Guest Log: -rw-------. 1 atlas atlas       357 Jun  4 19:04 output.list
2025-06-04 21:04:16 (26696): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  4 19:04 runtime_log
2025-06-04 21:04:16 (26696): Guest Log: -rw-------. 1 atlas atlas   2621440 Jun  4 19:04 result.tar.gz
2025-06-04 21:04:16 (26696): Guest Log: -rw-------. 1 atlas atlas       657 Jun  4 19:04 woUKDm86xg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmclnKDmM66vAo.diag
2025-06-04 21:04:16 (26696): Guest Log: -rw-r--r--. 1 atlas atlas      8465 Jun  4 19:04 runtime_log.err
2025-06-04 21:04:16 (26696): Guest Log: Looking for outputfile HITS.45006595._055555.pool.root.1
2025-06-04 21:04:16 (26696): Guest Log: HITS file was successfully produced
2025-06-04 21:04:16 (26696): Guest Log: -rw-------. 1 atlas atlas 179983136 Jun  4 19:03 /home/atlas/RunAtlas/HITS.45006595._055555.pool.root.1
2025-06-04 21:04:17 (26696): Guest Log: Successfully finished the ATLAS job!
2025-06-04 21:04:17 (26696): Guest Log: Copying the results back to the shared directory!
2025-06-04 21:04:17 (26696): Guest Log:  *** Contents of shared directory: ***
2025-06-04 21:04:17 (26696): Guest Log: total 388220
2025-06-04 21:04:17 (26696): Guest Log: -rwxrwxrwx. 1 root root 214387325 Jun  4 12:33 ATLAS.root_0
2025-06-04 21:04:17 (26696): Guest Log: -rwxrwxrwx. 1 root root 179983136 Jun  4  2025 HITS.pool.root.1
2025-06-04 21:04:17 (26696): Guest Log: -rwxrwxrwx. 1 root root      9354 Jun  4 12:33 init_data.xml
2025-06-04 21:04:17 (26696): Guest Log: -rwxrwxrwx. 1 root root    508887 Jun  4 12:20 input.tar.gz
2025-06-04 21:04:17 (26696): Guest Log: -rwxrwxrwx. 1 root root   2621440 Jun  4  2025 result.tar.gz
2025-06-04 21:04:17 (26696): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  4 12:20 start_atlas.sh
2025-06-04 21:04:17 (26696): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 21:04:17 (26696): VM Completion File Detected.
2025-06-04 21:04:17 (26696): Powering off VM.
2025-06-04 21:04:18 (26696): Successfully stopped VM.
2025-06-04 21:04:18 (26696): Deregistering VM. (boinc_16a671d070b870a5, slot#35)
2025-06-04 21:04:18 (26696): Removing network bandwidth throttle group from VM.
2025-06-04 21:04:18 (26696): Removing VM from VirtualBox.
21:04:23 (26696): called boinc_finish(0)

</stderr_txt>
]]>

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