Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:18:25 (59741): wrapper (7.7.26015): starting
08:18:25 (59741): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:18:25] Arguments: --nthreads 8
[2025-06-04 08:18:25] Threads: 8
[2025-06-04 08:18:25] Checking for CVMFS
[2025-06-04 08:18:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:18:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:18:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:18:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:18:25] 2.11.2.0 10304 12638 353044 146779 1 1058 15517517 18432000 13293 130560 0 108335844 99.325 145577023 50348 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 08:18:25] CVMFS is ok
[2025-06-04 08:18:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:18:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:18:25] Further information can be found at the LHC@home message board.
[2025-06-04 08:18:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:18:25] Checking for apptainer binary...
[2025-06-04 08:18:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:18:25] Running /usr/bin/apptainer --version
[2025-06-04 08:18:25] apptainer version 1.3.2-1.el7
[2025-06-04 08:18:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:18:26] c-212-11.aglt2.org
[2025-06-04 08:18:26] apptainer works
[2025-06-04 08:18:26] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:18:26] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:18:26] Starting ATLAS job with PandaID=6678459486
[2025-06-04 08:18:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:26:13]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:26:13]  workdir=None
[2025-06-04 09:26:13] ]
[2025-06-04 09:26:13] 2025-06-04 13:25:41,207 | INFO     | transferring file log.45006595._055338.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678459486/log.45006595._055338.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:26:13] 2025-06-04 13:25:41,207 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678459486/log.45006595._055338.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._055338.job
[2025-06-04 09:26:13] 2025-06-04 13:25:41,225 | INFO     | adding to output.list: log.45006595._055338.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d5/f4/log.45006595._055338.job.log.tg
[2025-06-04 09:26:13] 2025-06-04 13:25:41,226 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:26:13] 2025-06-04 13:25:41,226 | INFO     | summary of transferred files:
[2025-06-04 09:26:13] 2025-06-04 13:25:41,226 | INFO     |  -- lfn=log.45006595._055338.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:26:13] 2025-06-04 13:25:41,226 | INFO     | stage-out finished correctly
[2025-06-04 09:26:13] 2025-06-04 13:25:41,600 | INFO     | monitor loop #301: job 0:6678459486 is in state 'finished'
[2025-06-04 09:26:13] 2025-06-04 13:25:41,600 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:26:13] 2025-06-04 13:25:43,110 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:26:13] 2025-06-04 13:25:43,181 | INFO     | job 6678459486 has state=finished
[2025-06-04 09:26:13] 2025-06-04 13:25:43,181 | INFO     | preparing for final server update for job 6678459486 in state='finished'
[2025-06-04 09:26:13] 2025-06-04 13:25:43,182 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:26:13] 2025-06-04 13:25:43,182 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:26:13] 2025-06-04 13:25:43,182 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:26:13] 2025-06-04 13:25:43,182 | INFO     | job 6678459486 has finished - writing final server update
[2025-06-04 09:26:13] 2025-06-04 13:25:43,182 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:26:13] 2025-06-04 13:25:43,187 | INFO     | executing command: lscpu
[2025-06-04 09:26:13] 2025-06-04 13:25:43,252 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:26:13] 2025-06-04 13:25:44,104 | INFO     | monitor loop #302: job 0:6678459486 is in state 'finished'
[2025-06-04 09:26:13] 2025-06-04 13:25:44,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:26:13] 2025-06-04 13:25:44,952 | INFO     | PID=80127 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 09:26:13] 2025-06-04 13:25:44,953 | INFO     | .. there are 25 such processes running
[2025-06-04 09:26:13] 2025-06-04 13:25:46,608 | INFO     | monitor loop #303: job 0:6678459486 is in state 'finished'
[2025-06-04 09:26:13] 2025-06-04 13:25:46,608 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:26:13] 2025-06-04 13:25:47,959 | INFO     | 4032s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 09:26:13] 2025-06-04 13:25:49,114 | INFO     | monitor loop #304: job 0:6678459486 is in state 'finished'
[2025-06-04 09:26:13] 2025-06-04 13:25:49,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:26:13] 2025-06-04 13:25:51,619 | INFO     | monitor loop #305: job 0:6678459486 is in state 'finished'
[2025-06-04 09:26:13] 2025-06-04 13:25:51,619 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:26:13] 2025-06-04 13:25:54,127 | INFO     | monitor loop #306: job 0:6678459486 is in state 'finished'
[2025-06-04 09:26:13] 2025-06-04 13:25:54,127 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:26:13] 2025-06-04 13:25:56,632 | INFO     | monitor loop #307: job 0:6678459486 is in state 'finished'
[2025-06-04 09:26:13] 2025-06-04 13:25:56,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:26:13] 2025-06-04 13:25:59,138 | INFO     | monitor loop #308: job 0:6678459486 is in state 'finished'
[2025-06-04 09:26:13] 2025-06-04 13:25:59,138 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:26:13] 2025-06-04 13:25:59,185 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 09:26:13] 2025-06-04 13:25:59,185 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678459486/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:26:13] 2025-06-04 13:25:59,186 | INFO     | extracted standard info from prmon json
[2025-06-04 09:26:13] 2025-06-04 13:25:59,186 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:26:13] 2025-06-04 13:25:59,186 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:26:13] 2025-06-04 13:25:59,187 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:26:13] 2025-06-04 13:25:59,187 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:26:13] 2025-06-04 13:25:59,188 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:26:13] 2025-06-04 13:25:59,189 | INFO     | sum of square deviations: 63666310.0
[2025-06-04 09:26:13] 2025-06-04 13:25:59,189 | INFO     | sum of deviations: 158730967.0
[2025-06-04 09:26:13] 2025-06-04 13:25:59,189 | INFO     | mean x: 1749041620.0
[2025-06-04 09:26:13] 2025-06-04 13:25:59,189 | INFO     | mean y: 2487448.5084745763
[2025-06-04 09:26:13] 2025-06-04 13:25:59,189 | INFO     | -- intersect: -4358171550.98194
[2025-06-04 09:26:13] 2025-06-04 13:25:59,189 | INFO     | intersect: -4358171550.98194
[2025-06-04 09:26:13] 2025-06-04 13:25:59,189 | INFO     | chi2: 0.0005656019393828369
[2025-06-04 09:26:13] 2025-06-04 13:25:59,189 | INFO     | -- intersect: -4358171550.98194
[2025-06-04 09:26:13] 2025-06-04 13:25:59,190 | INFO     | current memory leak: 2.49 B/s (using 59 data points, chi2=0.00)
[2025-06-04 09:26:13] 2025-06-04 13:25:59,190 | INFO     | ..............................
[2025-06-04 09:26:13] 2025-06-04 13:25:59,190 | INFO     | . Timing measurements:
[2025-06-04 09:26:13] 2025-06-04 13:25:59,190 | INFO     | . get job = 0 s
[2025-06-04 09:26:13] 2025-06-04 13:25:59,190 | INFO     | . initial setup = 2 s
[2025-06-04 09:26:13] 2025-06-04 13:25:59,190 | INFO     | . payload setup = 7 s
[2025-06-04 09:26:13] 2025-06-04 13:25:59,190 | INFO     | . stage-in = 0 s
[2025-06-04 09:26:13] 2025-06-04 13:25:59,190 | INFO     | . payload execution = 3995 s
[2025-06-04 09:26:13] 2025-06-04 13:25:59,190 | INFO     | . stage-out = 1 s
[2025-06-04 09:26:13] 2025-06-04 13:25:59,191 | INFO     | . log creation = 0 s
[2025-06-04 09:26:13] 2025-06-04 13:25:59,191 | INFO     | ..............................
[2025-06-04 09:26:13] 2025-06-04 13:25:59,272 | INFO     | 
[2025-06-04 09:26:13] 2025-06-04 13:25:59,272 | INFO     | job summary report
[2025-06-04 09:26:13] 2025-06-04 13:25:59,272 | INFO     | --------------------------------------------------
[2025-06-04 09:26:13] 2025-06-04 13:25:59,272 | INFO     | PanDA job id: 6678459486
[2025-06-04 09:26:13] 2025-06-04 13:25:59,272 | INFO     | task id: 45006595
[2025-06-04 09:26:13] 2025-06-04 13:25:59,272 | INFO     | errors: (none)
[2025-06-04 09:26:13] 2025-06-04 13:25:59,272 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:26:13] 2025-06-04 13:25:59,272 | INFO     | pilot state: finished 
[2025-06-04 09:26:13] 2025-06-04 13:25:59,272 | INFO     | transexitcode: 0
[2025-06-04 09:26:13] 2025-06-04 13:25:59,272 | INFO     | exeerrorcode: 0
[2025-06-04 09:26:13] 2025-06-04 13:25:59,273 | INFO     | exeerrordiag: 
[2025-06-04 09:26:13] 2025-06-04 13:25:59,273 | INFO     | exitcode: 0
[2025-06-04 09:26:13] 2025-06-04 13:25:59,273 | INFO     | exitmsg: OK
[2025-06-04 09:26:13] 2025-06-04 13:25:59,273 | INFO     | cpuconsumptiontime: 26699 s
[2025-06-04 09:26:13] 2025-06-04 13:25:59,273 | INFO     | nevents: 400
[2025-06-04 09:26:13] 2025-06-04 13:25:59,273 | INFO     | neventsw: 0
[2025-06-04 09:26:13] 2025-06-04 13:25:59,273 | INFO     | pid: 13135
[2025-06-04 09:26:13] 2025-06-04 13:25:59,273 | INFO     | pgrp: 13135
[2025-06-04 09:26:13] 2025-06-04 13:25:59,273 | INFO     | corecount: 8
[2025-06-04 09:26:13] 2025-06-04 13:25:59,273 | INFO     | event service: False
[2025-06-04 09:26:13] 2025-06-04 13:25:59,273 | INFO     | sizes: {0: 2397290, 5: 2397496, 11: 2397552, 4007: 2423262, 4009: 2432203, 4010: 2432259, 4027: 2432557}
[2025-06-04 09:26:13] 2025-06-04 13:25:59,273 | INFO     | --------------------------------------------------
[2025-06-04 09:26:13] 2025-06-04 13:25:59,273 | INFO     | 
[2025-06-04 09:26:13] 2025-06-04 13:25:59,273 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 09:26:13] 2025-06-04 13:25:59,486 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:26:13] 2025-06-04 13:25:59,487 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:26:13] 2025-06-04 13:25:59,487 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:26:13] 2025-06-04 13:25:59,487 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:26:13] 2025-06-04 13:25:59,487 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:26:13] 2025-06-04 13:25:59,487 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:26:13] 2025-06-04 13:25:59,487 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:26:13] 2025-06-04 13:25:59,487 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:26:13] 2025-06-04 13:25:59,487 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:26:13] 2025-06-04 13:25:59,487 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:26:13] 2025-06-04 13:25:59,487 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:26:13] 2025-06-04 13:25:59,487 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:26:13] 2025-06-04 13:25:59,488 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:26:13] 2025-06-04 13:25:59,488 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:26:13] 2025-06-04 13:25:59,488 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:26:13] 2025-06-04 13:25:59,488 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:26:13] 2025-06-04 13:25:59,488 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:26:13] 2025-06-04 13:25:59,488 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:26:13] 2025-06-04 13:25:59,488 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:26:13] 2025-06-04 13:25:59,488 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:26:13] 2025-06-04 13:25:59,488 | INFO     | job 6678459486 has completed (purged errors)
[2025-06-04 09:26:13] 2025-06-04 13:25:59,488 | INFO     | overall cleanup function is called
[2025-06-04 09:26:13] 2025-06-04 13:26:00,496 | INFO     | --- collectZombieJob: --- 10, [13135]
[2025-06-04 09:26:13] 2025-06-04 13:26:00,496 | INFO     | zombie collector waiting for pid 13135
[2025-06-04 09:26:13] 2025-06-04 13:26:00,496 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:26:13] 2025-06-04 13:26:00,496 | INFO     | collected zombie processes
[2025-06-04 09:26:13] 2025-06-04 13:26:00,497 | INFO     | will attempt to kill all subprocesses of pid=13135
[2025-06-04 09:26:13] 2025-06-04 13:26:00,766 | INFO     | process IDs to be killed: [13135] (in reverse order)
[2025-06-04 09:26:13] 2025-06-04 13:26:00,913 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:26:13] 2025-06-04 13:26:00,914 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:26:13] 2025-06-04 13:26:00,924 | INFO     | did not find any defunct processes belonging to 13135
[2025-06-04 09:26:13] 2025-06-04 13:26:00,932 | INFO     | did not find any defunct processes belonging to 13135
[2025-06-04 09:26:13] 2025-06-04 13:26:00,932 | INFO     | ready for new job
[2025-06-04 09:26:13] 2025-06-04 13:26:00,933 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:26:13] 2025-06-04 13:26:00,934 | INFO     | **************************************
[2025-06-04 09:26:13] 2025-06-04 13:26:00,934 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:26:13] 2025-06-04 13:26:00,934 | INFO     | **************************************
[2025-06-04 09:26:13] 2025-06-04 13:26:00,934 | INFO     | 
[2025-06-04 09:26:13] 2025-06-04 13:26:00,938 | INFO     | architecture information:
[2025-06-04 09:26:13] 2025-06-04 13:26:00,938 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:26:13] 2025-06-04 13:26:00,954 | INFO     | cat /etc/os-release:
[2025-06-04 09:26:13] NAME="CentOS Linux"
[2025-06-04 09:26:13] VERSION="7 (Core)"
[2025-06-04 09:26:13] ID="centos"
[2025-06-04 09:26:13] ID_LIKE="rhel fedora"
[2025-06-04 09:26:13] VERSION_ID="7"
[2025-06-04 09:26:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:26:13] ANSI_COLOR="0;31"
[2025-06-04 09:26:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:26:13] HOME_URL="https://www.centos.org/"
[2025-06-04 09:26:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:26:13] 
[2025-06-04 09:26:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:26:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:26:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:26:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:26:13] 
[2025-06-04 09:26:13] 2025-06-04 13:26:00,954 | INFO     | **************************************
[2025-06-04 09:26:13] 2025-06-04 13:26:01,457 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 09:26:13] 2025-06-04 13:26:01,585 | INFO     | sufficient remaining disk space (103716749312 B)
[2025-06-04 09:26:13] 2025-06-04 13:26:01,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:26:13] 2025-06-04 13:26:01,585 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:26:13] 2025-06-04 13:26:01,585 | INFO     | update_server=False
[2025-06-04 09:26:13] 2025-06-04 13:26:01,586 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:26:13] 2025-06-04 13:26:01,586 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:26:13] 2025-06-04 13:26:01,586 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:26:13] 2025-06-04 13:26:01,586 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:26:13] 2025-06-04 13:26:01,586 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:26:13] 2025-06-04 13:26:01,643 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 09:26:13] 2025-06-04 13:26:01,646 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 09:26:13] 2025-06-04 13:26:01,646 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:26:13] 2025-06-04 13:26:01,646 | INFO     | will abort loop
[2025-06-04 09:26:13] 2025-06-04 13:26:01,886 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:26:13] 2025-06-04 13:26:02,037 | INFO     | all data control threads have been joined
[2025-06-04 09:26:13] 2025-06-04 13:26:02,511 | INFO     | all payload control threads have been joined
[2025-06-04 09:26:13] 2025-06-04 13:26:02,591 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:26:13] 2025-06-04 13:26:02,650 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:26:13] 2025-06-04 13:26:02,655 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:26:13] 2025-06-04 13:26:02,724 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:26:13] 2025-06-04 13:26:02,910 | INFO     | [job] validate thread has finished
[2025-06-04 09:26:13] 2025-06-04 13:26:03,043 | INFO     | [data] control thread has finished
[2025-06-04 09:26:13] 2025-06-04 13:26:03,159 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:26:13] 2025-06-04 13:26:03,219 | INFO     | all job control threads have been joined
[2025-06-04 09:26:13] 2025-06-04 13:26:03,256 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:26:13] 2025-06-04 13:26:03,358 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:26:13] 2025-06-04 13:26:03,497 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:26:13] 2025-06-04 13:26:03,511 | INFO     | [payload] control thread has finished
[2025-06-04 09:26:13] 2025-06-04 13:26:03,673 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:26:13] 2025-06-04 13:26:03,761 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:26:13] 2025-06-04 13:26:03,893 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:26:13] 2025-06-04 13:26:04,225 | INFO     | [job] control thread has finished
[2025-06-04 09:26:13] 2025-06-04 13:26:04,283 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:26:13] 2025-06-04 13:26:05,289 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:26:13] 2025-06-04 13:26:06,733 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:26:13] 2025-06-04 13:26:07,141 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140678402922304)>', '<ExcThread(monitor, started 140677677569792)>']
[2025-06-04 09:26:13] 2025-06-04 13:26:07,619 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:26:13] 2025-06-04 13:26:07,619 | INFO     | [monitor] control thread has ended
[2025-06-04 09:26:13] 2025-06-04 13:26:12,167 | INFO     | all workflow threads have been joined
[2025-06-04 09:26:13] 2025-06-04 13:26:12,167 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:26:13] 2025-06-04 13:26:12,167 | INFO     | traces error code: 0
[2025-06-04 09:26:13] 2025-06-04 13:26:12,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:26:13] 2025-06-04 13:26:12,250 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:26:13] 2025-06-04 13:26:12,263 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:26:13] 2025-06-04 13:26:12,268 [wrapper] pilotpid: 80127
[2025-06-04 09:26:13] 2025-06-04 13:26:12,272 [wrapper] Pilot exit status: 0
[2025-06-04 09:26:13] 2025-06-04 13:26:12,373 [wrapper] pandaids: 6678459486
[2025-06-04 09:26:13] 2025-06-04 13:26:12,439 [wrapper] cleanup supervisor_pilot 48499 80128
[2025-06-04 09:26:13] 2025-06-04 13:26:12,441 [wrapper] Test setup, not cleaning
[2025-06-04 09:26:13] 2025-06-04 13:26:12,443 [wrapper] apfmon messages muted
[2025-06-04 09:26:13] 2025-06-04 13:26:12,459 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:26:13] 2025-06-04 13:26:12,494 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:26:13]  *** Error codes and diagnostics ***
[2025-06-04 09:26:13]     "exeErrorCode": 0,
[2025-06-04 09:26:13]     "exeErrorDiag": "",
[2025-06-04 09:26:13]     "pilotErrorCode": 0,
[2025-06-04 09:26:13]     "pilotErrorDiag": "",
[2025-06-04 09:26:13]  *** Listing of results directory ***
[2025-06-04 09:26:13] total 385320
[2025-06-04 09:26:13] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 09:26:13] -rwx------ 1 boincer umatlas     37140 Jun  4 03:42 runpilot2-wrapper.sh
[2025-06-04 09:26:13] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:42 queuedata.json
[2025-06-04 09:26:13] -rw-r--r-- 1 boincer umatlas       100 Jun  4 08:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:26:13] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 08:18 run_atlas
[2025-06-04 09:26:13] -rw-r--r-- 1 boincer umatlas       105 Jun  4 08:18 job.xml
[2025-06-04 09:26:13] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:18 start_atlas.sh
[2025-06-04 09:26:13] drwxrwx--x 2 boincer umatlas      4096 Jun  4 08:18 shared
[2025-06-04 09:26:13] -rw-r--r-- 2 boincer umatlas    508886 Jun  4 08:18 input.tar.gz
[2025-06-04 09:26:13] -rw-r--r-- 2 boincer umatlas 213573802 Jun  4 08:18 EVNT.45006593._000687.pool.root.1
[2025-06-04 09:26:13] -rw-r--r-- 1 boincer umatlas         0 Jun  4 08:18 boinc_lockfile
[2025-06-04 09:26:13] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 08:18 pandaJob.out
[2025-06-04 09:26:13] -rw------- 1 boincer umatlas    986812 Jun  4 08:18 agis_schedconf.cvmfs.json
[2025-06-04 09:26:13] -rw------- 1 boincer umatlas   1598969 Jun  4 08:18 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:26:13] drwx------ 4 boincer umatlas      4096 Jun  4 08:18 pilot3
[2025-06-04 09:26:13] -rw-r--r-- 1 boincer umatlas      6387 Jun  4 09:20 init_data.xml
[2025-06-04 09:26:13] -rw------- 1 boincer umatlas 175741638 Jun  4 09:25 HITS.45006595._055338.pool.root.1
[2025-06-04 09:26:13] -rw-r--r-- 1 boincer umatlas       529 Jun  4 09:25 boinc_task_state.xml
[2025-06-04 09:26:13] -rw------- 1 boincer umatlas      1076 Jun  4 09:25 memory_monitor_summary.json
[2025-06-04 09:26:13] -rw------- 1 boincer umatlas    306487 Jun  4 09:25 log.45006595._055338.job.log.tgz.1
[2025-06-04 09:26:13] -rw------- 1 boincer umatlas        95 Jun  4 09:25 pilot_heartbeat.json
[2025-06-04 09:26:13] -rw------- 1 boincer umatlas      7738 Jun  4 09:25 heartbeat.json
[2025-06-04 09:26:13] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 09:26 boinc_mmap_file
[2025-06-04 09:26:13] -rw-r--r-- 1 boincer umatlas        27 Jun  4 09:26 wrapper_checkpoint.txt
[2025-06-04 09:26:13] -rw------- 1 boincer umatlas      4663 Jun  4 09:26 pilotlog.txt
[2025-06-04 09:26:13] -rw------- 1 boincer umatlas    405918 Jun  4 09:26 log.45006595._055338.job.log.1
[2025-06-04 09:26:13] -rw------- 1 boincer umatlas       357 Jun  4 09:26 output.list
[2025-06-04 09:26:13] -rw-r--r-- 1 boincer umatlas       620 Jun  4 09:26 runtime_log
[2025-06-04 09:26:13] -rw------- 1 boincer umatlas    727040 Jun  4 09:26 result.tar.gz
[2025-06-04 09:26:13] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 09:26 runtime_log.err
[2025-06-04 09:26:13] -rw------- 1 boincer umatlas       658 Jun  4 09:26 m94NDmAxxg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQxaKDmeT7M6n.diag
[2025-06-04 09:26:13] -rw-r--r-- 1 boincer umatlas     22339 Jun  4 09:26 stderr.txt
[2025-06-04 09:26:13] HITS file was successfully produced:
[2025-06-04 09:26:13] -rw------- 1 boincer umatlas 175741638 Jun  4 09:25 shared/HITS.pool.root.1
[2025-06-04 09:26:13]  *** Contents of shared directory: ***
[2025-06-04 09:26:13] total 381428
[2025-06-04 09:26:13] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:18 start_atlas.sh
[2025-06-04 09:26:13] -rw-r--r-- 2 boincer umatlas    508886 Jun  4 08:18 input.tar.gz
[2025-06-04 09:26:13] -rw-r--r-- 2 boincer umatlas 213573802 Jun  4 08:18 ATLAS.root_0
[2025-06-04 09:26:13] -rw------- 1 boincer umatlas 175741638 Jun  4 09:25 HITS.pool.root.1
[2025-06-04 09:26:13] -rw------- 1 boincer umatlas    727040 Jun  4 09:26 result.tar.gz
09:26:14 (59741): run_atlas exited; CPU time 26572.102246
09:26:14 (59741): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN