Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:14:10 (3838942): wrapper (7.7.26015): starting
08:14:10 (3838942): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:14:10] Arguments: --nthreads 8
[2025-06-04 08:14:10] Threads: 8
[2025-06-04 08:14:10] Checking for CVMFS
[2025-06-04 08:14:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:14:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:14:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:14:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:14:11] 2.12.6.0 7995 1324 160468 146779 0 454 26418491 32935936 9874 16776704 0 17839687 99.941 1919125 32896 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:14:11] CVMFS is ok
[2025-06-04 08:14:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:14:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:14:11] Further information can be found at the LHC@home message board.
[2025-06-04 08:14:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:14:11] Checking for apptainer binary...
[2025-06-04 08:14:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:14:11] Running /usr/bin/apptainer --version
[2025-06-04 08:14:11] apptainer version 1.4.1-1.el9
[2025-06-04 08:14:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:14:11] c6-8-25-2.aglt2.org
[2025-06-04 08:14:11] apptainer works
[2025-06-04 08:14:11] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:14:11] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:14:11] Starting ATLAS job with PandaID=6678391468
[2025-06-04 08:14:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:11:21]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:11:21]  filetype=log
[2025-06-04 09:11:21]  guid=ca4c2e47-a1e1-4ce2-a570-fa9673e3c8bc
[2025-06-04 09:11:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 09:11:21]  is_altstaged=None
[2025-06-04 09:11:21]  is_tar=False
[2025-06-04 09:11:21]  lfn=log.45006595._054830.job.log.tgz.1
[2025-06-04 09:11:21]  mtime=0
[2025-06-04 09:11:21]  protocol_id=None
[2025-06-04 09:11:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:11:21]  replicas=None
[2025-06-04 09:11:21]  scope=mc23_13p6TeV
[2025-06-04 09:11:21]  status=None
[2025-06-04 09:11:21]  status_code=0
[2025-06-04 09:11:21]  storage_token=
[2025-06-04 09:11:21]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678391468/log.45006595._054830.job.log.tgz.1
[2025-06-04 09:11:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/cc/log.45006595._054830.job.log.tgz.1
[2025-06-04 09:11:21]  workdir=None
[2025-06-04 09:11:21] ]
[2025-06-04 09:11:21] 2025-06-04 13:10:56,764 | INFO     | transferring file log.45006595._054830.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678391468/log.45006595._054830.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:11:21] 2025-06-04 13:10:56,764 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678391468/log.45006595._054830.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._054830.job
[2025-06-04 09:11:21] 2025-06-04 13:10:56,779 | INFO     | adding to output.list: log.45006595._054830.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/cc/log.45006595._054830.job.log.tg
[2025-06-04 09:11:21] 2025-06-04 13:10:56,780 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:11:21] 2025-06-04 13:10:56,780 | INFO     | summary of transferred files:
[2025-06-04 09:11:21] 2025-06-04 13:10:56,780 | INFO     |  -- lfn=log.45006595._054830.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:11:21] 2025-06-04 13:10:56,780 | INFO     | stage-out finished correctly
[2025-06-04 09:11:21] 2025-06-04 13:10:56,829 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:11:21] 2025-06-04 13:10:57,871 | INFO     | job 6678391468 has state=finished
[2025-06-04 09:11:21] 2025-06-04 13:10:57,871 | INFO     | preparing for final server update for job 6678391468 in state='finished'
[2025-06-04 09:11:21] 2025-06-04 13:10:57,872 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:11:21] 2025-06-04 13:10:57,872 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:11:21] 2025-06-04 13:10:57,872 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:11:21] 2025-06-04 13:10:57,872 | INFO     | job 6678391468 has finished - writing final server update
[2025-06-04 09:11:21] 2025-06-04 13:10:57,872 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:11:21] 2025-06-04 13:10:57,889 | INFO     | executing command: lscpu
[2025-06-04 09:11:21] 2025-06-04 13:10:57,960 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:11:21] 2025-06-04 13:10:58,983 | WARNING  | process 3852299 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:11:21] 2025-06-04 13:10:58,984 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678391468/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:11:21] 2025-06-04 13:10:59,307 | INFO     | number of running child processes to parent process 3852299: 1
[2025-06-04 09:11:21] 2025-06-04 13:10:59,308 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:11:21] 2025-06-04 13:11:00,760 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:11:21] 2025-06-04 13:11:00,760 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678391468/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:11:21] 2025-06-04 13:11:00,760 | INFO     | extracted standard info from prmon json
[2025-06-04 09:11:21] 2025-06-04 13:11:00,761 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:11:21] 2025-06-04 13:11:00,761 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:11:21] 2025-06-04 13:11:00,761 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:11:21] 2025-06-04 13:11:00,761 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:11:21] 2025-06-04 13:11:00,762 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:11:21] 2025-06-04 13:11:00,762 | INFO     | sum of square deviations: 36465800.0
[2025-06-04 09:11:21] 2025-06-04 13:11:00,762 | INFO     | sum of deviations: 5313506198.999998
[2025-06-04 09:11:21] 2025-06-04 13:11:00,762 | INFO     | mean x: 1749041049.0
[2025-06-04 09:11:21] 2025-06-04 13:11:00,762 | INFO     | mean y: 2186577.7959183673
[2025-06-04 09:11:21] 2025-06-04 13:11:00,763 | INFO     | -- intersect: -254854157069.3189
[2025-06-04 09:11:21] 2025-06-04 13:11:00,763 | INFO     | intersect: -254854157069.3189
[2025-06-04 09:11:21] 2025-06-04 13:11:00,763 | INFO     | chi2: 1.0427886975082965
[2025-06-04 09:11:21] 2025-06-04 13:11:00,763 | INFO     | -- intersect: -254854157069.3189
[2025-06-04 09:11:21] 2025-06-04 13:11:00,763 | INFO     | current memory leak: 145.71 B/s (using 49 data points, chi2=1.04)
[2025-06-04 09:11:21] 2025-06-04 13:11:00,763 | INFO     | ..............................
[2025-06-04 09:11:21] 2025-06-04 13:11:00,763 | INFO     | . Timing measurements:
[2025-06-04 09:11:21] 2025-06-04 13:11:00,763 | INFO     | . get job = 0 s
[2025-06-04 09:11:21] 2025-06-04 13:11:00,763 | INFO     | . initial setup = 2 s
[2025-06-04 09:11:21] 2025-06-04 13:11:00,763 | INFO     | . payload setup = 4 s
[2025-06-04 09:11:21] 2025-06-04 13:11:00,763 | INFO     | . stage-in = 0 s
[2025-06-04 09:11:21] 2025-06-04 13:11:00,763 | INFO     | . payload execution = 3375 s
[2025-06-04 09:11:21] 2025-06-04 13:11:00,763 | INFO     | . stage-out = 0 s
[2025-06-04 09:11:21] 2025-06-04 13:11:00,763 | INFO     | . log creation = 0 s
[2025-06-04 09:11:21] 2025-06-04 13:11:00,763 | INFO     | ..............................
[2025-06-04 09:11:21] 2025-06-04 13:11:00,935 | INFO     | 
[2025-06-04 09:11:21] 2025-06-04 13:11:00,935 | INFO     | job summary report
[2025-06-04 09:11:21] 2025-06-04 13:11:00,935 | INFO     | --------------------------------------------------
[2025-06-04 09:11:21] 2025-06-04 13:11:00,935 | INFO     | PanDA job id: 6678391468
[2025-06-04 09:11:21] 2025-06-04 13:11:00,936 | INFO     | task id: 45006595
[2025-06-04 09:11:21] 2025-06-04 13:11:00,936 | INFO     | errors: (none)
[2025-06-04 09:11:21] 2025-06-04 13:11:00,936 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:11:21] 2025-06-04 13:11:00,936 | INFO     | pilot state: finished 
[2025-06-04 09:11:21] 2025-06-04 13:11:00,936 | INFO     | transexitcode: 0
[2025-06-04 09:11:21] 2025-06-04 13:11:00,936 | INFO     | exeerrorcode: 0
[2025-06-04 09:11:21] 2025-06-04 13:11:00,936 | INFO     | exeerrordiag: 
[2025-06-04 09:11:21] 2025-06-04 13:11:00,936 | INFO     | exitcode: 0
[2025-06-04 09:11:21] 2025-06-04 13:11:00,936 | INFO     | exitmsg: OK
[2025-06-04 09:11:21] 2025-06-04 13:11:00,936 | INFO     | cpuconsumptiontime: 22377 s
[2025-06-04 09:11:21] 2025-06-04 13:11:00,936 | INFO     | nevents: 400
[2025-06-04 09:11:21] 2025-06-04 13:11:00,936 | INFO     | neventsw: 0
[2025-06-04 09:11:21] 2025-06-04 13:11:00,936 | INFO     | pid: 3852299
[2025-06-04 09:11:21] 2025-06-04 13:11:00,936 | INFO     | pgrp: 3852299
[2025-06-04 09:11:21] 2025-06-04 13:11:00,936 | INFO     | corecount: 8
[2025-06-04 09:11:21] 2025-06-04 13:11:00,937 | INFO     | event service: False
[2025-06-04 09:11:21] 2025-06-04 13:11:00,937 | INFO     | sizes: {0: 2397171, 1: 2397370, 3: 2397576, 11: 2397604, 3383: 2423176, 3384: 2432301, 3388: 2432415}
[2025-06-04 09:11:21] 2025-06-04 13:11:00,937 | INFO     | --------------------------------------------------
[2025-06-04 09:11:21] 2025-06-04 13:11:00,937 | INFO     | 
[2025-06-04 09:11:21] 2025-06-04 13:11:00,937 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 09:11:21] 2025-06-04 13:11:00,951 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:11:21] 2025-06-04 13:11:00,952 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:11:21] 2025-06-04 13:11:00,952 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:11:21] 2025-06-04 13:11:00,952 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:11:21] 2025-06-04 13:11:00,952 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:11:21] 2025-06-04 13:11:00,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:11:21] 2025-06-04 13:11:00,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:11:21] 2025-06-04 13:11:00,953 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:11:21] 2025-06-04 13:11:00,953 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:11:21] 2025-06-04 13:11:00,953 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:11:21] 2025-06-04 13:11:00,953 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:11:21] 2025-06-04 13:11:00,953 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:11:21] 2025-06-04 13:11:00,953 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:11:21] 2025-06-04 13:11:00,953 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:11:21] 2025-06-04 13:11:00,953 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:11:21] 2025-06-04 13:11:00,953 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:11:21] 2025-06-04 13:11:00,953 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:11:21] 2025-06-04 13:11:00,953 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:11:21] 2025-06-04 13:11:00,953 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:11:21] 2025-06-04 13:11:00,953 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:11:21] 2025-06-04 13:11:00,954 | INFO     | job 6678391468 has completed (purged errors)
[2025-06-04 09:11:21] 2025-06-04 13:11:00,954 | INFO     | overall cleanup function is called
[2025-06-04 09:11:21] 2025-06-04 13:11:01,961 | INFO     | --- collectZombieJob: --- 10, [3852299]
[2025-06-04 09:11:21] 2025-06-04 13:11:01,961 | INFO     | zombie collector waiting for pid 3852299
[2025-06-04 09:11:21] 2025-06-04 13:11:01,961 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:11:21] 2025-06-04 13:11:01,961 | INFO     | collected zombie processes
[2025-06-04 09:11:21] 2025-06-04 13:11:01,961 | INFO     | will attempt to kill all subprocesses of pid=3852299
[2025-06-04 09:11:21] 2025-06-04 13:11:02,242 | INFO     | process IDs to be killed: [3852299] (in reverse order)
[2025-06-04 09:11:21] 2025-06-04 13:11:02,307 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:11:21] 2025-06-04 13:11:02,307 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:11:21] 2025-06-04 13:11:02,320 | INFO     | did not find any defunct processes belonging to 3852299
[2025-06-04 09:11:21] 2025-06-04 13:11:02,333 | INFO     | did not find any defunct processes belonging to 3852299
[2025-06-04 09:11:21] 2025-06-04 13:11:02,334 | INFO     | ready for new job
[2025-06-04 09:11:21] 2025-06-04 13:11:02,334 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:11:21] 2025-06-04 13:11:02,335 | INFO     | **************************************
[2025-06-04 09:11:21] 2025-06-04 13:11:02,335 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:11:21] 2025-06-04 13:11:02,335 | INFO     | **************************************
[2025-06-04 09:11:21] 2025-06-04 13:11:02,335 | INFO     | 
[2025-06-04 09:11:21] 2025-06-04 13:11:02,353 | INFO     | architecture information:
[2025-06-04 09:11:21] 2025-06-04 13:11:02,353 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:11:21] 2025-06-04 13:11:02,366 | INFO     | cat /etc/os-release:
[2025-06-04 09:11:21] NAME="CentOS Linux"
[2025-06-04 09:11:21] VERSION="7 (Core)"
[2025-06-04 09:11:21] ID="centos"
[2025-06-04 09:11:21] ID_LIKE="rhel fedora"
[2025-06-04 09:11:21] VERSION_ID="7"
[2025-06-04 09:11:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:11:21] ANSI_COLOR="0;31"
[2025-06-04 09:11:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:11:21] HOME_URL="https://www.centos.org/"
[2025-06-04 09:11:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:11:21] 
[2025-06-04 09:11:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:11:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:11:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:11:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:11:21] 
[2025-06-04 09:11:21] 2025-06-04 13:11:02,366 | INFO     | **************************************
[2025-06-04 09:11:21] 2025-06-04 13:11:02,869 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 09:11:21] 2025-06-04 13:11:02,885 | INFO     | sufficient remaining disk space (75666292736 B)
[2025-06-04 09:11:21] 2025-06-04 13:11:02,885 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:11:21] 2025-06-04 13:11:02,886 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:11:21] 2025-06-04 13:11:02,886 | INFO     | update_server=False
[2025-06-04 09:11:21] 2025-06-04 13:11:02,886 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:11:21] 2025-06-04 13:11:02,886 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:11:21] 2025-06-04 13:11:02,886 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:11:21] 2025-06-04 13:11:02,886 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:11:21] 2025-06-04 13:11:02,887 | INFO     | aborting loop
[2025-06-04 09:11:21] 2025-06-04 13:11:02,887 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:11:21] 2025-06-04 13:11:02,888 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:11:21] 2025-06-04 13:11:02,888 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:11:21] 2025-06-04 13:11:02,908 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:11:21] 2025-06-04 13:11:02,927 | INFO     | all payload control threads have been joined
[2025-06-04 09:11:21] 2025-06-04 13:11:03,318 | INFO     | all data control threads have been joined
[2025-06-04 09:11:21] 2025-06-04 13:11:03,695 | INFO     | all job control threads have been joined
[2025-06-04 09:11:21] 2025-06-04 13:11:03,891 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:11:21] 2025-06-04 13:11:03,893 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:11:21] 2025-06-04 13:11:03,907 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:11:21] 2025-06-04 13:11:03,933 | INFO     | [payload] control thread has finished
[2025-06-04 09:11:21] 2025-06-04 13:11:03,991 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:11:21] 2025-06-04 13:11:04,323 | INFO     | [data] control thread has finished
[2025-06-04 09:11:21] 2025-06-04 13:11:04,420 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:11:21] 2025-06-04 13:11:04,701 | INFO     | [job] control thread has finished
[2025-06-04 09:11:21] 2025-06-04 13:11:04,893 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:11:21] 2025-06-04 13:11:04,988 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:11:21] 2025-06-04 13:11:04,991 | INFO     | [job] validate thread has finished
[2025-06-04 09:11:21] 2025-06-04 13:11:05,133 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:11:21] 2025-06-04 13:11:05,185 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:11:21] 2025-06-04 13:11:05,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:11:21] 2025-06-04 13:11:06,828 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:11:21] 2025-06-04 13:11:06,914 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:11:21] 2025-06-04 13:11:13,475 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:11:21] 2025-06-04 13:11:14,480 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:11:21] 2025-06-04 13:11:15,779 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140631568471872)>', '<ExcThread(monitor, started 140630718150400)>']
[2025-06-04 09:11:21] 2025-06-04 13:11:15,953 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:11:21] 2025-06-04 13:11:15,953 | INFO     | [monitor] control thread has ended
[2025-06-04 09:11:21] 2025-06-04 13:11:20,805 | INFO     | all workflow threads have been joined
[2025-06-04 09:11:21] 2025-06-04 13:11:20,806 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:11:21] 2025-06-04 13:11:20,806 | INFO     | traces error code: 0
[2025-06-04 09:11:21] 2025-06-04 13:11:20,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:11:21] 2025-06-04 13:11:20,942 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:11:21] 2025-06-04 13:11:20,944 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:11:21] 2025-06-04 13:11:20,947 [wrapper] pilotpid: 3842823
[2025-06-04 09:11:21] 2025-06-04 13:11:20,949 [wrapper] Pilot exit status: 0
[2025-06-04 09:11:21] 2025-06-04 13:11:20,958 [wrapper] pandaids: 6678391468
[2025-06-04 09:11:21] 2025-06-04 13:11:21,021 [wrapper] cleanup supervisor_pilot 3998270 3842824
[2025-06-04 09:11:21] 2025-06-04 13:11:21,023 [wrapper] Test setup, not cleaning
[2025-06-04 09:11:21] 2025-06-04 13:11:21,026 [wrapper] apfmon messages muted
[2025-06-04 09:11:21] 2025-06-04 13:11:21,027 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:11:21] 2025-06-04 13:11:21,029 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:11:21]  *** Error codes and diagnostics ***
[2025-06-04 09:11:21]     "exeErrorCode": 0,
[2025-06-04 09:11:21]     "exeErrorDiag": "",
[2025-06-04 09:11:21]     "pilotErrorCode": 0,
[2025-06-04 09:11:21]     "pilotErrorDiag": "",
[2025-06-04 09:11:21]  *** Listing of results directory ***
[2025-06-04 09:11:21] total 396044
[2025-06-04 09:11:21] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:04 pilot3.tar.gz
[2025-06-04 09:11:21] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:29 queuedata.json
[2025-06-04 09:11:21] -rwx------. 1 boincer umatlas     37140 Jun  4 03:30 runpilot2-wrapper.sh
[2025-06-04 09:11:21] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:11:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:14 run_atlas
[2025-06-04 09:11:21] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:14 job.xml
[2025-06-04 09:11:21] -rw-r--r--. 2 boincer umatlas 217632793 Jun  4 08:14 EVNT.45006593._002194.pool.root.1
[2025-06-04 09:11:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:14 start_atlas.sh
[2025-06-04 09:11:21] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:14 shared
[2025-06-04 09:11:21] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 08:14 input.tar.gz
[2025-06-04 09:11:21] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:14 boinc_lockfile
[2025-06-04 09:11:21] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 08:14 pandaJob.out
[2025-06-04 09:11:21] -rw-------. 1 boincer umatlas    986812 Jun  4 08:14 agis_schedconf.cvmfs.json
[2025-06-04 09:11:21] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:14 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:11:21] drwx------. 4 boincer umatlas      4096 Jun  4 08:14 pilot3
[2025-06-04 09:11:21] -rw-r--r--. 1 boincer umatlas      6852 Jun  4 09:09 init_data.xml
[2025-06-04 09:11:21] -rw-------. 1 boincer umatlas        95 Jun  4 09:10 pilot_heartbeat.json
[2025-06-04 09:11:21] -rw-------. 1 boincer umatlas 182818736 Jun  4 09:10 HITS.45006595._054830.pool.root.1
[2025-06-04 09:11:21] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:10 boinc_task_state.xml
[2025-06-04 09:11:21] -rw-------. 1 boincer umatlas      1036 Jun  4 09:10 memory_monitor_summary.json
[2025-06-04 09:11:21] -rw-------. 1 boincer umatlas    284479 Jun  4 09:10 log.45006595._054830.job.log.tgz.1
[2025-06-04 09:11:21] -rw-------. 1 boincer umatlas      7715 Jun  4 09:11 heartbeat.json
[2025-06-04 09:11:21] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:11 boinc_mmap_file
[2025-06-04 09:11:21] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:11 wrapper_checkpoint.txt
[2025-06-04 09:11:21] -rw-------. 1 boincer umatlas      4548 Jun  4 09:11 pilotlog.txt
[2025-06-04 09:11:21] -rw-------. 1 boincer umatlas    347017 Jun  4 09:11 log.45006595._054830.job.log.1
[2025-06-04 09:11:21] -rw-------. 1 boincer umatlas       357 Jun  4 09:11 output.list
[2025-06-04 09:11:21] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:11 runtime_log
[2025-06-04 09:11:21] -rw-------. 1 boincer umatlas    655360 Jun  4 09:11 result.tar.gz
[2025-06-04 09:11:21] -rw-r--r--. 1 boincer umatlas      8664 Jun  4 09:11 runtime_log.err
[2025-06-04 09:11:21] -rw-------. 1 boincer umatlas       651 Jun  4 09:11 qLvLDmOlxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLdnKDmFaKAjm.diag
[2025-06-04 09:11:21] -rw-r--r--. 1 boincer umatlas     21208 Jun  4 09:11 stderr.txt
[2025-06-04 09:11:21] HITS file was successfully produced:
[2025-06-04 09:11:21] -rw-------. 1 boincer umatlas 182818736 Jun  4 09:10 shared/HITS.pool.root.1
[2025-06-04 09:11:21]  *** Contents of shared directory: ***
[2025-06-04 09:11:21] total 392232
[2025-06-04 09:11:21] -rw-r--r--. 2 boincer umatlas 217632793 Jun  4 08:14 ATLAS.root_0
[2025-06-04 09:11:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:14 start_atlas.sh
[2025-06-04 09:11:21] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 08:14 input.tar.gz
[2025-06-04 09:11:21] -rw-------. 1 boincer umatlas 182818736 Jun  4 09:10 HITS.pool.root.1
[2025-06-04 09:11:21] -rw-------. 1 boincer umatlas    655360 Jun  4 09:11 result.tar.gz
09:11:23 (3838942): run_atlas exited; CPU time 22495.042321
09:11:23 (3838942): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN