Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:17:41 (2481): wrapper (7.7.26015): starting
23:17:41 (2481): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 23:17:41] Arguments: --nthreads 8
[2025-06-04 23:17:41] Threads: 8
[2025-06-04 23:17:41] Checking for CVMFS
[2025-06-04 23:17:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:17:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:17:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:17:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:17:43] 2.11.2.0 2191 33725 91876 146795 1 16 15255073 25165825 3423 130560 0 17216951 99.783 20716119 2379 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 23:17:43] CVMFS is ok
[2025-06-04 23:17:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:17:43] Checking for apptainer binary...
[2025-06-04 23:17:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:17:43] Running /usr/bin/apptainer --version
[2025-06-04 23:17:43] apptainer version 1.3.2-1.el7
[2025-06-04 23:17:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:17:55] cg-vwn409.simple-grid.lan
[2025-06-04 23:17:55] apptainer works
[2025-06-04 23:17:55] Set ATHENA_PROC_NUMBER=8
[2025-06-04 23:17:55] Set ATHENA_CORE_NUMBER=8
[2025-06-04 23:17:55] Starting ATLAS job with PandaID=6678473348
[2025-06-04 23:17:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:43:56]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:43:56] 2025-06-05 01:00:18,446 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6678473348/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:43:56] 2025-06-05 01:00:18,447 | INFO     | extracted standard info from prmon json
[2025-06-05 08:43:56] 2025-06-05 01:00:18,447 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:43:56] 2025-06-05 01:00:18,447 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:43:56] 2025-06-05 01:00:18,447 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:43:56] 2025-06-05 01:00:18,448 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:43:56] 2025-06-05 01:00:18,452 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:43:56] 2025-06-05 01:00:18,453 | INFO     | sum of square deviations: 2912836010.0
[2025-06-05 08:43:56] 2025-06-05 01:00:18,454 | INFO     | sum of deviations: -27921283011.0
[2025-06-05 08:43:56] 2025-06-05 01:00:18,454 | INFO     | mean x: 1749078687.0
[2025-06-05 08:43:56] 2025-06-05 01:00:18,455 | INFO     | mean y: 2497215.104265403
[2025-06-05 08:43:56] 2025-06-05 01:00:18,455 | INFO     | -- intersect: 16768467170.35598
[2025-06-05 08:43:56] 2025-06-05 01:00:18,455 | INFO     | intersect: 16768467170.35598
[2025-06-05 08:43:56] 2025-06-05 01:00:18,455 | INFO     | chi2: 2.4957476969873973
[2025-06-05 08:43:56] 2025-06-05 01:00:18,455 | INFO     | sum of square deviations: 2710627567.5
[2025-06-05 08:43:56] 2025-06-05 01:00:18,457 | INFO     | sum of deviations: -13344707700.0
[2025-06-05 08:43:56] 2025-06-05 01:00:18,457 | INFO     | mean x: 1749078534.5
[2025-06-05 08:43:56] 2025-06-05 01:00:18,457 | INFO     | mean y: 2508007.5339805824
[2025-06-05 08:43:56] 2025-06-05 01:00:18,457 | INFO     | -- intersect: 8613407589.277008
[2025-06-05 08:43:56] 2025-06-05 01:00:18,458 | INFO     | intersect: 8613407589.277008
[2025-06-05 08:43:56] 2025-06-05 01:00:18,458 | INFO     | chi2: 1.7291969766058743
[2025-06-05 08:43:56] 2025-06-05 01:00:18,458 | INFO     | current chi2=1.7291969766058743 (change=30.71427137073278 %)
[2025-06-05 08:43:56] 2025-06-05 01:00:18,458 | INFO     | sum of square deviations: 2518000700.0
[2025-06-05 08:43:56] 2025-06-05 01:00:18,460 | INFO     | sum of deviations: -12866785693.000004
[2025-06-05 08:43:56] 2025-06-05 01:00:18,460 | INFO     | mean x: 1749078382.0
[2025-06-05 08:43:56] 2025-06-05 01:00:18,460 | INFO     | mean y: 2508386.1343283583
[2025-06-05 08:43:56] 2025-06-05 01:00:18,460 | INFO     | -- intersect: 8940161462.026323
[2025-06-05 08:43:56] 2025-06-05 01:00:18,460 | INFO     | intersect: 8940161462.026323
[2025-06-05 08:43:56] 2025-06-05 01:00:18,461 | INFO     | chi2: 1.7280327571466882
[2025-06-05 08:43:56] 2025-06-05 01:00:18,461 | INFO     | current chi2=1.7280327571466882 (change=0.0673271741124177 %)
[2025-06-05 08:43:56] 2025-06-05 01:00:18,461 | INFO     | right removable region: 200
[2025-06-05 08:43:56] 2025-06-05 01:00:18,461 | INFO     | sum of square deviations: 2710627567.5
[2025-06-05 08:43:56] 2025-06-05 01:00:18,463 | INFO     | sum of deviations: -61076372427.00001
[2025-06-05 08:43:56] 2025-06-05 01:00:18,463 | INFO     | mean x: 1749078839.5
[2025-06-05 08:43:56] 2025-06-05 01:00:18,463 | INFO     | mean y: 2521974.0776699027
[2025-06-05 08:43:56] 2025-06-05 01:00:18,463 | INFO     | -- intersect: 39413096811.554665
[2025-06-05 08:43:56] 2025-06-05 01:00:18,463 | INFO     | intersect: 39413096811.554665
[2025-06-05 08:43:56] 2025-06-05 01:00:18,464 | INFO     | chi2: 1.0022813213572175
[2025-06-05 08:43:56] 2025-06-05 01:00:18,464 | INFO     | current chi2=1.0022813213572175 (change=59.840438896645466 %)
[2025-06-05 08:43:56] 2025-06-05 01:00:18,464 | INFO     | sum of square deviations: 2518000700.0
[2025-06-05 08:43:56] 2025-06-05 01:00:18,466 | INFO     | sum of deviations: -59200561854.0
[2025-06-05 08:43:56] 2025-06-05 01:00:18,466 | INFO     | mean x: 1749078992.0
[2025-06-05 08:43:56] 2025-06-05 01:00:18,466 | INFO     | mean y: 2520447.3184079602
[2025-06-05 08:43:56] 2025-06-05 01:00:18,466 | INFO     | -- intersect: 41125010625.11223
[2025-06-05 08:43:56] 2025-06-05 01:00:18,466 | INFO     | intersect: 41125010625.11223
[2025-06-05 08:43:56] 2025-06-05 01:00:18,467 | INFO     | chi2: 0.9867128962163849
[2025-06-05 08:43:56] 2025-06-05 01:00:18,467 | INFO     | current chi2=0.9867128962163849 (change=1.5532989400372061 %)
[2025-06-05 08:43:56] 2025-06-05 01:00:18,467 | INFO     | left removable region: 20
[2025-06-05 08:43:56] 2025-06-05 01:00:18,467 | INFO     | sum of square deviations: 1808350185.0
[2025-06-05 08:43:56] 2025-06-05 01:00:18,468 | INFO     | sum of deviations: -31658078412.000008
[2025-06-05 08:43:56] 2025-06-05 01:00:18,469 | INFO     | mean x: 1749078961.5
[2025-06-05 08:43:56] 2025-06-05 01:00:18,469 | INFO     | mean y: 2522582.8666666667
[2025-06-05 08:43:56] 2025-06-05 01:00:18,469 | INFO     | -- intersect: 30622962899.821396
[2025-06-05 08:43:56] 2025-06-05 01:00:18,469 | INFO     | intersect: 30622962899.821396
[2025-06-05 08:43:56] 2025-06-05 01:00:18,469 | INFO     | chi2: 0.17487497581624922
[2025-06-05 08:43:56] 2025-06-05 01:00:18,469 | INFO     | -- intersect: 30622962899.821396
[2025-06-05 08:43:56] 2025-06-05 01:00:18,470 | INFO     | current memory leak: -17.51 B/s (using 180 data points, chi2=0.17)
[2025-06-05 08:43:56] 2025-06-05 01:00:18,470 | INFO     | ..............................
[2025-06-05 08:43:56] 2025-06-05 01:00:18,471 | INFO     | . Timing measurements:
[2025-06-05 08:43:56] 2025-06-05 01:00:18,471 | INFO     | . get job = 0 s
[2025-06-05 08:43:56] 2025-06-05 01:00:18,471 | INFO     | . initial setup = 2 s
[2025-06-05 08:43:56] 2025-06-05 01:00:18,471 | INFO     | . payload setup = 44 s
[2025-06-05 08:43:56] 2025-06-05 01:00:18,471 | INFO     | . stage-in = 0 s
[2025-06-05 08:43:56] 2025-06-05 01:00:18,471 | INFO     | . payload execution = 12854 s
[2025-06-05 08:43:56] 2025-06-05 01:00:18,471 | INFO     | . stage-out = 3 s
[2025-06-05 08:43:56] 2025-06-05 01:00:18,471 | INFO     | . log creation = 1 s
[2025-06-05 08:43:56] 2025-06-05 01:00:18,471 | INFO     | ..............................
[2025-06-05 08:43:56] 2025-06-05 01:00:18,933 | INFO     | 
[2025-06-05 08:43:56] 2025-06-05 01:00:18,933 | INFO     | job summary report
[2025-06-05 08:43:56] 2025-06-05 01:00:18,933 | INFO     | --------------------------------------------------
[2025-06-05 08:43:56] 2025-06-05 01:00:18,933 | INFO     | PanDA job id: 6678473348
[2025-06-05 08:43:56] 2025-06-05 01:00:18,933 | INFO     | task id: 45006595
[2025-06-05 08:43:56] 2025-06-05 01:00:18,934 | INFO     | errors: (none)
[2025-06-05 08:43:56] 2025-06-05 01:00:18,934 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:43:56] 2025-06-05 01:00:18,934 | INFO     | pilot state: finished 
[2025-06-05 08:43:56] 2025-06-05 01:00:18,934 | INFO     | transexitcode: 0
[2025-06-05 08:43:56] 2025-06-05 01:00:18,934 | INFO     | exeerrorcode: 0
[2025-06-05 08:43:56] 2025-06-05 01:00:18,934 | INFO     | exeerrordiag: 
[2025-06-05 08:43:56] 2025-06-05 01:00:18,934 | INFO     | exitcode: 0
[2025-06-05 08:43:56] 2025-06-05 01:00:18,934 | INFO     | exitmsg: OK
[2025-06-05 08:43:56] 2025-06-05 01:00:18,934 | INFO     | cpuconsumptiontime: 47996 s
[2025-06-05 08:43:56] 2025-06-05 01:00:18,934 | INFO     | nevents: 400
[2025-06-05 08:43:56] 2025-06-05 01:00:18,934 | INFO     | neventsw: 0
[2025-06-05 08:43:56] 2025-06-05 01:00:18,935 | INFO     | pid: 15677
[2025-06-05 08:43:56] 2025-06-05 01:00:18,935 | INFO     | pgrp: 15677
[2025-06-05 08:43:56] 2025-06-05 01:00:18,935 | INFO     | corecount: 8
[2025-06-05 08:43:56] 2025-06-05 01:00:18,935 | INFO     | event service: False
[2025-06-05 08:43:56] 2025-06-05 01:00:18,935 | INFO     | sizes: {0: 2396411, 1: 2397267, 2: 2397267, 13: 2397295, 23: 2397351, 34: 2397379, 45: 2397535, 56: 2397563, 66: 2397591, 77: 2397619, 84: 2397881, 88: 2398189, 12
[2025-06-05 08:43:56] 2025-06-05 01:00:18,935 | INFO     | --------------------------------------------------
[2025-06-05 08:43:56] 2025-06-05 01:00:18,935 | INFO     | 
[2025-06-05 08:43:56] 2025-06-05 01:00:18,935 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-05 08:43:56] 2025-06-05 01:00:19,389 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:43:56] 2025-06-05 01:00:19,390 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:43:56] 2025-06-05 01:00:19,390 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:43:56] 2025-06-05 01:00:19,390 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:43:56] 2025-06-05 01:00:19,390 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:43:56] 2025-06-05 01:00:19,390 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:43:56] 2025-06-05 01:00:19,390 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:43:56] 2025-06-05 01:00:19,390 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:43:56] 2025-06-05 01:00:19,391 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:43:56] 2025-06-05 01:00:19,391 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:43:56] 2025-06-05 01:00:19,391 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:43:56] 2025-06-05 01:00:19,391 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:43:56] 2025-06-05 01:00:19,391 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:43:56] 2025-06-05 01:00:19,391 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:43:56] 2025-06-05 01:00:19,391 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:43:56] 2025-06-05 01:00:19,391 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:43:56] 2025-06-05 01:00:19,391 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:43:56] 2025-06-05 01:00:19,392 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:43:56] 2025-06-05 01:00:19,392 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:43:56] 2025-06-05 01:00:19,392 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:43:56] 2025-06-05 01:00:19,392 | INFO     | job 6678473348 has completed (purged errors)
[2025-06-05 08:43:56] 2025-06-05 01:00:19,392 | INFO     | overall cleanup function is called
[2025-06-05 08:43:56] 2025-06-05 01:00:20,402 | INFO     | --- collectZombieJob: --- 10, [15677]
[2025-06-05 08:43:56] 2025-06-05 01:00:20,402 | INFO     | zombie collector waiting for pid 15677
[2025-06-05 08:43:56] 2025-06-05 01:00:20,402 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:43:56] 2025-06-05 01:00:20,403 | INFO     | collected zombie processes
[2025-06-05 08:43:56] 2025-06-05 01:00:20,403 | INFO     | will attempt to kill all subprocesses of pid=15677
[2025-06-05 08:43:56] 2025-06-05 01:00:20,531 | INFO     | process IDs to be killed: [15677] (in reverse order)
[2025-06-05 08:43:56] 2025-06-05 01:00:21,069 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:43:56] 2025-06-05 01:00:21,069 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:43:56] 2025-06-05 01:00:21,075 | INFO     | did not find any defunct processes belonging to 15677
[2025-06-05 08:43:56] 2025-06-05 01:00:21,089 | INFO     | did not find any defunct processes belonging to 15677
[2025-06-05 08:43:56] 2025-06-05 01:00:21,090 | INFO     | ready for new job
[2025-06-05 08:43:56] 2025-06-05 01:00:21,090 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:43:56] 2025-06-05 01:00:21,092 | INFO     | **************************************
[2025-06-05 08:43:56] 2025-06-05 01:00:21,092 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:43:56] 2025-06-05 01:00:21,092 | INFO     | **************************************
[2025-06-05 08:43:56] 2025-06-05 01:00:21,092 | INFO     | 
[2025-06-05 08:43:56] 2025-06-05 01:00:21,093 | INFO     | pilot is running in a VM
[2025-06-05 08:43:56] 2025-06-05 01:00:21,093 | INFO     | architecture information:
[2025-06-05 08:43:56] 2025-06-05 01:00:21,108 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:43:56] 2025-06-05 01:00:21,328 | INFO     | cat /etc/os-release:
[2025-06-05 08:43:56] NAME="CentOS Linux"
[2025-06-05 08:43:56] VERSION="7 (Core)"
[2025-06-05 08:43:56] ID="centos"
[2025-06-05 08:43:56] ID_LIKE="rhel fedora"
[2025-06-05 08:43:56] VERSION_ID="7"
[2025-06-05 08:43:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:43:56] ANSI_COLOR="0;31"
[2025-06-05 08:43:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:43:56] HOME_URL="https://www.centos.org/"
[2025-06-05 08:43:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:43:56] 
[2025-06-05 08:43:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:43:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:43:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:43:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:43:56] 
[2025-06-05 08:43:56] 2025-06-05 01:00:21,329 | INFO     | **************************************
[2025-06-05 08:43:56] 2025-06-05 01:00:21,832 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-05 08:43:56] 2025-06-05 01:00:22,021 | INFO     | sufficient remaining disk space (496990420992 B)
[2025-06-05 08:43:56] 2025-06-05 01:00:22,022 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:43:56] 2025-06-05 01:00:22,022 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:43:56] 2025-06-05 01:00:22,022 | INFO     | update_server=False
[2025-06-05 08:43:56] 2025-06-05 01:00:22,022 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:43:56] 2025-06-05 01:00:22,023 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:43:56] 2025-06-05 01:00:22,025 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:43:56] 2025-06-05 01:00:22,025 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:43:56] 2025-06-05 01:00:22,025 | INFO     | aborting loop
[2025-06-05 08:43:56] 2025-06-05 01:00:22,200 | INFO     | all payload control threads have been joined
[2025-06-05 08:43:56] 2025-06-05 01:00:22,259 | INFO     | all data control threads have been joined
[2025-06-05 08:43:56] 2025-06-05 01:00:22,761 | INFO     | all job control threads have been joined
[2025-06-05 08:43:56] 2025-06-05 01:00:22,874 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:43:56] 2025-06-05 01:00:22,874 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:43:56] 2025-06-05 01:00:22,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:43:56] 2025-06-05 01:00:23,028 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:43:56] 2025-06-05 01:00:23,031 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:43:56] 2025-06-05 01:00:23,190 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:43:56] 2025-06-05 01:00:23,206 | INFO     | [payload] control thread has finished
[2025-06-05 08:43:56] 2025-06-05 01:00:23,222 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:43:56] 2025-06-05 01:00:23,265 | INFO     | [data] control thread has finished
[2025-06-05 08:43:56] 2025-06-05 01:00:23,382 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:43:56] 2025-06-05 01:00:23,606 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:43:56] 2025-06-05 01:00:23,767 | INFO     | [job] control thread has finished
[2025-06-05 08:43:56] 2025-06-05 01:00:23,927 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:43:56] 2025-06-05 01:00:23,972 | INFO     | [job] validate thread has finished
[2025-06-05 08:43:56] 2025-06-05 01:00:24,030 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:43:56] 2025-06-05 01:00:24,169 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:43:56] 2025-06-05 01:00:24,240 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:43:56] 2025-06-05 01:00:24,447 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:43:56] 2025-06-05 01:00:24,612 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:43:56] 2025-06-05 01:00:26,034 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:43:56] 2025-06-05 01:00:27,382 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140305812604736)>', '<ExcThread(monitor, started 140305072371456)>']
[2025-06-05 08:43:56] 2025-06-05 01:00:27,905 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:43:56] 2025-06-05 01:00:27,905 | INFO     | [monitor] control thread has ended
[2025-06-05 08:43:56] 2025-06-05 01:00:32,409 | INFO     | all workflow threads have been joined
[2025-06-05 08:43:56] 2025-06-05 01:00:32,409 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:43:56] 2025-06-05 01:00:32,409 | INFO     | traces error code: 0
[2025-06-05 08:43:56] 2025-06-05 01:00:32,410 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:43:56] 2025-06-05 01:00:32,770 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:43:56] 2025-06-05 01:00:32,877 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:43:56] 2025-06-05 01:00:32,952 [wrapper] pilotpid: 9038
[2025-06-05 08:43:56] 2025-06-05 01:00:33,014 [wrapper] Pilot exit status: 0
[2025-06-05 08:43:56] 2025-06-05 01:00:33,509 [wrapper] pandaids: 6678473348
[2025-06-05 08:43:56] 2025-06-05 01:00:34,251 [wrapper] cleanup supervisor_pilot 21834 9039
[2025-06-05 08:43:56] 2025-06-05 01:00:34,365 [wrapper] Test setup, not cleaning
[2025-06-05 08:43:56] 2025-06-05 01:00:34,422 [wrapper] apfmon messages muted
[2025-06-05 08:43:56] 2025-06-05 01:00:34,521 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:43:56] 2025-06-05 01:00:34,600 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:43:56]  *** Error codes and diagnostics ***
[2025-06-05 08:43:56]     "exeErrorCode": 0,
[2025-06-05 08:43:56]     "exeErrorDiag": "",
[2025-06-05 08:43:56]     "pilotErrorCode": 0,
[2025-06-05 08:43:56]     "pilotErrorDiag": "",
[2025-06-05 08:43:56]  *** Listing of results directory ***
[2025-06-05 08:43:56] total 384796
[2025-06-05 08:43:56] -rw-r--r--. 1 boinc boinc    495897 Jun  4 09:34 pilot3.tar.gz
[2025-06-05 08:43:56] -rw-r--r--. 1 boinc boinc      5111 Jun  4 09:42 queuedata.json
[2025-06-05 08:43:56] -rwx------. 1 boinc boinc     37140 Jun  4 09:42 runpilot2-wrapper.sh
[2025-06-05 08:43:56] -rw-r--r--. 1 boinc boinc       100 Jun  4 23:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:43:56] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 23:17 run_atlas
[2025-06-05 08:43:56] -rw-r--r--. 1 boinc boinc       105 Jun  4 23:17 job.xml
[2025-06-05 08:43:56] -rw-r--r--. 1 boinc boinc      6392 Jun  4 23:17 init_data.xml
[2025-06-05 08:43:56] -rw-r--r--. 2 boinc boinc 215496602 Jun  4 23:17 EVNT.45006593._000747.pool.root.1
[2025-06-05 08:43:56] -rw-r--r--. 2 boinc boinc     15093 Jun  4 23:17 start_atlas.sh
[2025-06-05 08:43:56] drwxrwx--x. 2 boinc boinc        68 Jun  4 23:17 shared
[2025-06-05 08:43:56] -rw-r--r--. 2 boinc boinc    508884 Jun  4 23:17 input.tar.gz
[2025-06-05 08:43:56] -rw-r--r--. 1 boinc boinc         0 Jun  4 23:17 boinc_lockfile
[2025-06-05 08:43:56] -rw-r--r--. 1 boinc boinc      2523 Jun  4 23:17 pandaJob.out
[2025-06-05 08:43:56] -rw-------. 1 boinc boinc    987032 Jun  4 23:20 agis_schedconf.cvmfs.json
[2025-06-05 08:43:56] drwx------. 4 boinc boinc      4096 Jun  4 23:20 pilot3
[2025-06-05 08:43:56] -rw-------. 1 boinc boinc 171684876 Jun  5 02:57 HITS.45006595._055351.pool.root.1
[2025-06-05 08:43:56] -rw-r--r--. 1 boinc boinc       531 Jun  5 02:57 boinc_task_state.xml
[2025-06-05 08:43:56] -rw-------. 1 boinc boinc      1019 Jun  5 02:58 memory_monitor_summary.json
[2025-06-05 08:43:56] -rw-------. 1 boinc boinc   1598969 Jun  5 02:58 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:43:56] -rw-------. 1 boinc boinc    380652 Jun  5 02:58 log.45006595._055351.job.log.tgz.1
[2025-06-05 08:43:56] -rw-------. 1 boinc boinc        95 Jun  5 02:59 pilot_heartbeat.json
[2025-06-05 08:43:56] -rw-------. 1 boinc boinc      7691 Jun  5 03:00 heartbeat.json
[2025-06-05 08:43:56] -rw-------. 1 boinc boinc      4416 Jun  5 03:00 pilotlog.txt
[2025-06-05 08:43:56] -rw-------. 1 boinc boinc   1137368 Jun  5 03:00 log.45006595._055351.job.log.1
[2025-06-05 08:43:56] -rw-------. 1 boinc boinc       357 Jun  5 03:00 output.list
[2025-06-05 08:43:56] -rw-r--r--. 1 boinc boinc       620 Jun  5 03:00 runtime_log
[2025-06-05 08:43:56] -rw-------. 1 boinc boinc   1536000 Jun  5 03:00 result.tar.gz
[2025-06-05 08:43:56] -rw-------. 1 boinc boinc       657 Jun  5 03:00 TWHKDmBxxg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmdxaKDmMJWBim.diag
[2025-06-05 08:43:56] -rw-r--r--. 1 boinc boinc      8659 Jun  5 03:00 runtime_log.err
[2025-06-05 08:43:56] -rw-r--r--. 1 boinc boinc        28 Jun  5 08:43 wrapper_checkpoint.txt
[2025-06-05 08:43:56] -rw-r--r--. 1 boinc boinc      8192 Jun  5 08:43 boinc_mmap_file
[2025-06-05 08:43:56] -rw-r--r--. 1 boinc boinc     20525 Jun  5 08:43 stderr.txt
[2025-06-05 08:43:56] HITS file was successfully produced:
[2025-06-05 08:43:56] -rw-------. 1 boinc boinc 171684876 Jun  5 02:57 shared/HITS.pool.root.1
[2025-06-05 08:43:56]  *** Contents of shared directory: ***
[2025-06-05 08:43:56] total 380128
[2025-06-05 08:43:56] -rw-r--r--. 2 boinc boinc 215496602 Jun  4 23:17 ATLAS.root_0
[2025-06-05 08:43:56] -rw-r--r--. 2 boinc boinc     15093 Jun  4 23:17 start_atlas.sh
[2025-06-05 08:43:56] -rw-r--r--. 2 boinc boinc    508884 Jun  4 23:17 input.tar.gz
[2025-06-05 08:43:56] -rw-------. 1 boinc boinc 171684876 Jun  5 02:57 HITS.pool.root.1
[2025-06-05 08:43:56] -rw-------. 1 boinc boinc   1536000 Jun  5 03:00 result.tar.gz
08:43:58 (2481): run_atlas exited; CPU time 48180.038478
08:43:58 (2481): called boinc_finish(0)

</stderr_txt>
]]>

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