Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 16:41:16 (19400): Detected: vboxwrapper 26206
2025-06-04 16:41:16 (19400): Detected: BOINC client v8.0.2
2025-06-04 16:41:16 (19400): Detected: VirtualBox VboxManage Interface (Version: 7.0.8)
2025-06-04 16:41:16 (19400): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 16:41:17 (19400): Create VM. (boinc_195b3a0b3c5a2232, slot#4)
2025-06-04 16:41:17 (19400): Setting Memory Size for VM. (4800MB)
2025-06-04 16:41:18 (19400): Setting CPU Count for VM. (8)
2025-06-04 16:41:18 (19400): Setting Chipset Options for VM.
2025-06-04 16:41:18 (19400): Setting Graphics Controller Options for VM.
2025-06-04 16:41:18 (19400): Setting Boot Options for VM.
2025-06-04 16:41:19 (19400): Setting Network Configuration for NAT.
2025-06-04 16:41:19 (19400): Enabling VM Network Access.
2025-06-04 16:41:19 (19400): Disabling USB Support for VM.
2025-06-04 16:41:19 (19400): Disabling COM Port Support for VM.
2025-06-04 16:41:20 (19400): Disabling LPT Port Support for VM.
2025-06-04 16:41:20 (19400): Disabling Audio Support for VM.
2025-06-04 16:41:20 (19400): Disabling Clipboard Support for VM.
2025-06-04 16:41:20 (19400): Disabling Drag and Drop Support for VM.
2025-06-04 16:41:21 (19400): Adding storage controller(s) to VM.
2025-06-04 16:41:21 (19400): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 16:41:22 (19400): Adding VirtualBox Guest Additions to VM.
2025-06-04 16:41:22 (19400): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 16:41:22 (19400): forwarding host port 49608 to guest port 80
2025-06-04 16:41:22 (19400): Enabling remote desktop for VM.
2025-06-04 16:41:23 (19400): Required extension pack not installed, remote desktop not enabled.
2025-06-04 16:41:23 (19400): Enabling shared directory for VM.
2025-06-04 16:41:23 (19400): Starting VM using VBoxManage interface. (boinc_195b3a0b3c5a2232, slot#4)
2025-06-04 16:41:30 (19400): Successfully started VM. (PID = '19844')
2025-06-04 16:41:30 (19400): Reporting VM Process ID to BOINC.
2025-06-04 16:41:30 (19400): Guest Log: BIOS: VirtualBox 7.0.8
2025-06-04 16:41:30 (19400): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 16:41:30 (19400): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 16:41:30 (19400): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 16:41:30 (19400): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 16:41:30 (19400): Detected: Web Application Enabled (http://localhost:49608)
2025-06-04 16:41:30 (19400): Preference change detected
2025-06-04 16:41:30 (19400): Setting CPU throttle for VM. (100%)
2025-06-04 16:41:30 (19400): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 16:41:32 (19400): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 16:41:32 (19400): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 16:41:35 (19400): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 16:41:35 (19400): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 16:41:35 (19400): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 16:41:40 (19400): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 16:41:40 (19400): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 16:41:46 (19400): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 16:41:46 (19400): Guest Log: 00:00:00.000127 main     Log opened 2025-06-04T16:41:44.596104000Z
2025-06-04 16:41:46 (19400): Guest Log: 00:00:00.000206 main     OS Product: Linux
2025-06-04 16:41:46 (19400): Guest Log: 00:00:00.000255 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 16:41:46 (19400): Guest Log: 00:00:00.000279 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 16:41:46 (19400): Guest Log: 00:00:00.000301 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 16:41:46 (19400): Guest Log: 00:00:00.000301 main     Process ID: 1362
2025-06-04 16:41:46 (19400): Guest Log: 00:00:00.000302 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 16:41:46 (19400): Guest Log: 00:00:00.001033 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 16:41:46 (19400): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 16:41:46 (19400): Guest Log: [INFO] Mounting shared directory
2025-06-04 16:41:46 (19400): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 16:41:48 (19400): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 16:41:48 (19400): Guest Log: [INFO] Detected branch: prod
2025-06-04 16:41:48 (19400): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 16:41:48 (19400): Guest Log: Copying input files
2025-06-04 16:41:50 (19400): Guest Log: Copied input files into RunAtlas.
2025-06-04 16:41:50 (19400): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-04 16:41:50 (19400): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-04 16:41:50 (19400): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-04 16:41:50 (19400): Guest Log: Further information can be found at the LHC@home message board.
2025-06-04 16:41:56 (19400): Guest Log: 00:00:10.002406 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 238 609 000ns (GuestNow=1 749 048 115 359 343 000 ns GuestLast=1 749 055 304 597 952 000 ns fSetTimeLastLoop=true )
2025-06-04 16:41:59 (19400): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 16:41:59 (19400): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 16:41:59 (19400): Guest Log: 2.6.3.0 1638 0 30308 146783 4 1 3120513 4096000 0 65024 0 0 n/a 1291 618 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-04 16:42:00 (19400): Guest Log: copied the webapp to /var/www
2025-06-04 16:42:00 (19400): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-04 16:42:00 (19400): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-04 16:42:00 (19400): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 16:42:00 (19400): Guest Log:  *** Starting ATLAS job. (PandaID=6678535743 taskID=45006595) ***
2025-06-04 18:21:36 (19400): Status Report: Elapsed Time: '6000.000000'
2025-06-04 18:21:36 (19400): Status Report: CPU Time: '34276.312500'
2025-06-04 18:32:14 (19400): VM state change detected. (old = 'running', new = 'paused')
2025-06-04 18:59:16 (19400): VM state change detected. (old = 'paused', new = 'running')
2025-06-04 18:59:19 (19400): VM state change detected. (old = 'running', new = 'paused')
2025-06-05 02:48:16 (19400): Guest Log: 01:50:31.927592 timesync vgsvcTimeSyncWorker: Radical host time change: 29 768 907 000 000ns (HostNow=1 749 084 496 189 000 000 ns HostLast=1 749 054 727 282 000 000 ns)
2025-06-05 02:48:16 (19400): VM state change detected. (old = 'paused', new = 'running')
2025-06-05 02:48:26 (19400): Guest Log: 01:50:41.928676 timesync vgsvcTimeSyncWorker: Radical guest time change: 29 768 906 553 000ns (GuestNow=1 749 084 506 190 282 000 ns GuestLast=1 749 054 737 283 729 000 ns fSetTimeLastLoop=true )
2025-06-05 03:20:26 (19400): Guest Log:  *** Job finished ***
2025-06-05 03:20:26 (19400): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-05 03:20:26 (19400): Guest Log: 2025-06-05 01:20:18,342 | INFO     | [data] copytool_in thread has finished
2025-06-05 03:20:26 (19400): Guest Log: 2025-06-05 01:20:18,851 | INFO     | [data] copytool_out thread has finished
2025-06-05 03:20:27 (19400): Guest Log: 2025-06-05 01:20:20,003 | INFO     | [data] queue_monitor thread has finished
2025-06-05 03:20:27 (19400): Guest Log: 2025-06-05 01:20:20,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139869380990784)>', '<ExcThread(monitor, started 139868428564224)>']
2025-06-05 03:20:27 (19400): Guest Log: 2025-06-05 01:20:20,348 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-05 03:20:27 (19400): Guest Log: 2025-06-05 01:20:20,350 | INFO     | [monitor] control thread has ended
2025-06-05 03:20:27 (19400): Guest Log: 2025-06-05 01:20:25,076 | INFO     | all workflow threads have been joined
2025-06-05 03:20:27 (19400): Guest Log: 2025-06-05 01:20:25,077 | INFO     | end of generic workflow (traces error code: 0)
2025-06-05 03:20:27 (19400): Guest Log: 2025-06-05 01:20:25,077 | INFO     | traces error code: 0
2025-06-05 03:20:27 (19400): Guest Log: 2025-06-05 01:20:25,077 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-05 03:20:27 (19400): Guest Log: 2025-06-05 01:20:25,237 [wrapper] ==== pilot stdout END ====
2025-06-05 03:20:27 (19400): Guest Log: 2025-06-05 01:20:25,258 [wrapper] ==== wrapper stdout RESUME ====
2025-06-05 03:20:27 (19400): Guest Log: 2025-06-05 01:20:25,277 [wrapper] pilotpid: 5987
2025-06-05 03:20:27 (19400): Guest Log: 2025-06-05 01:20:25,287 [wrapper] Pilot exit status: 0
2025-06-05 03:20:27 (19400): Guest Log: 2025-06-05 01:20:25,374 [wrapper] pandaids: 6678535743
2025-06-05 03:20:27 (19400): Guest Log: 2025-06-05 01:20:25,451 [wrapper] cleanup supervisor_pilot  6500 5988
2025-06-05 03:20:27 (19400): Guest Log: 2025-06-05 01:20:25,458 [wrapper] Test setup, not cleaning
2025-06-05 03:20:27 (19400): Guest Log: 2025-06-05 01:20:25,465 [wrapper] apfmon messages muted
2025-06-05 03:20:27 (19400): Guest Log: 2025-06-05 01:20:25,472 [wrapper] ==== wrapper stdout END ====
2025-06-05 03:20:27 (19400): Guest Log: 2025-06-05 01:20:25,479 [wrapper] ==== wrapper stderr END ====
2025-06-05 03:20:27 (19400): Guest Log:  *** Error codes and diagnostics ***
2025-06-05 03:20:27 (19400): Guest Log:     "exeErrorCode": 0,
2025-06-05 03:20:27 (19400): Guest Log:     "exeErrorDiag": "",
2025-06-05 03:20:27 (19400): Guest Log:     "pilotErrorCode": 0,
2025-06-05 03:20:27 (19400): Guest Log:     "pilotErrorDiag": "",
2025-06-05 03:20:27 (19400): Guest Log:  *** Listing of results directory ***
2025-06-05 03:20:27 (19400): Guest Log: total 177100
2025-06-05 03:20:27 (19400): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  4 07:34 pilot3.tar.gz
2025-06-05 03:20:27 (19400): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 07:46 runpilot2-wrapper.sh
2025-06-05 03:20:27 (19400): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 07:46 queuedata.json
2025-06-05 03:20:27 (19400): Guest Log: -rwxr-xr-x. 1 atlas atlas      9499 Jun  4 14:41 init_data.xml
2025-06-05 03:20:27 (19400): Guest Log: -rwxr-xr-x. 1 atlas atlas    508877 Jun  4 14:41 input.tar.gz
2025-06-05 03:20:27 (19400): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  4 14:41 start_atlas.sh
2025-06-05 03:20:27 (19400): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  4 14:41 EVNT.45006593._000125.pool.root.1 -> /data/./ATLAS.root_0
2025-06-05 03:20:27 (19400): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Jun  4 14:42 pandaJob.out
2025-06-05 03:20:27 (19400): Guest Log: -rw-------. 1 atlas atlas    987207 Jun  4 14:42 agis_schedconf.cvmfs.json
2025-06-05 03:20:27 (19400): Guest Log: drwx------. 4 atlas atlas      4096 Jun  4 14:42 pilot3
2025-06-05 03:20:27 (19400): Guest Log: -rw-------. 1 atlas atlas 175562364 Jun  5 01:19 HITS.45006595._055387.pool.root.1
2025-06-05 03:20:27 (19400): Guest Log: -rw-------. 1 atlas atlas        98 Jun  5 01:19 pilot_heartbeat.json
2025-06-05 03:20:27 (19400): Guest Log: -rw-------. 1 atlas atlas      1033 Jun  5 01:19 memory_monitor_summary.json
2025-06-05 03:20:27 (19400): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  5 01:19 agis_ddmendpoints.agis.ALL.json
2025-06-05 03:20:27 (19400): Guest Log: -rw-------. 1 atlas atlas    318186 Jun  5 01:19 log.45006595._055387.job.log.tgz.1
2025-06-05 03:20:27 (19400): Guest Log: -rw-------. 1 atlas atlas      7725 Jun  5 01:20 heartbeat.json
2025-06-05 03:20:27 (19400): Guest Log: -rw-------. 1 atlas atlas      4413 Jun  5 01:20 pilotlog.txt
2025-06-05 03:20:27 (19400): Guest Log: -rw-------. 1 atlas atlas    691915 Jun  5 01:20 log.45006595._055387.job.log.1
2025-06-05 03:20:27 (19400): Guest Log: -rw-------. 1 atlas atlas       357 Jun  5 01:20 output.list
2025-06-05 03:20:27 (19400): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  5 01:20 runtime_log
2025-06-05 03:20:27 (19400): Guest Log: -rw-------. 1 atlas atlas   1034240 Jun  5 01:20 result.tar.gz
2025-06-05 03:20:27 (19400): Guest Log: -rw-------. 1 atlas atlas       668 Jun  5 01:20 uh0NDmG0xg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvinKDmGlccPm.diag
2025-06-05 03:20:27 (19400): Guest Log: -rw-r--r--. 1 atlas atlas      8626 Jun  5 01:20 runtime_log.err
2025-06-05 03:20:27 (19400): Guest Log: Looking for outputfile HITS.45006595._055387.pool.root.1
2025-06-05 03:20:27 (19400): Guest Log: HITS file was successfully produced
2025-06-05 03:20:27 (19400): Guest Log: -rw-------. 1 atlas atlas 175562364 Jun  5 01:19 /home/atlas/RunAtlas/HITS.45006595._055387.pool.root.1
2025-06-05 03:20:28 (19400): Guest Log: Successfully finished the ATLAS job!
2025-06-05 03:20:28 (19400): Guest Log: Copying the results back to the shared directory!
2025-06-05 03:20:28 (19400): Guest Log:  *** Contents of shared directory: ***
2025-06-05 03:20:28 (19400): Guest Log: total 384404
2025-06-05 03:20:28 (19400): Guest Log: -rwxrwxrwx. 1 root root 216487203 Jun  4 14:41 ATLAS.root_0
2025-06-05 03:20:28 (19400): Guest Log: -rwxrwxrwx. 1 root root 175562364 Jun  5 01:20 HITS.pool.root.1
2025-06-05 03:20:28 (19400): Guest Log: -rwxrwxrwx. 1 root root      9499 Jun  4 14:41 init_data.xml
2025-06-05 03:20:28 (19400): Guest Log: -rwxrwxrwx. 1 root root    508877 Jun  4 12:25 input.tar.gz
2025-06-05 03:20:28 (19400): Guest Log: -rwxrwxrwx. 1 root root   1034240 Jun  5 01:20 result.tar.gz
2025-06-05 03:20:28 (19400): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  4 12:25 start_atlas.sh
2025-06-05 03:20:28 (19400): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-05 03:20:28 (19400): VM Completion File Detected.
2025-06-05 03:20:28 (19400): Powering off VM.
2025-06-05 03:20:29 (19400): Successfully stopped VM.
2025-06-05 03:20:29 (19400): Deregistering VM. (boinc_195b3a0b3c5a2232, slot#4)
2025-06-05 03:20:29 (19400): Removing network bandwidth throttle group from VM.
2025-06-05 03:20:30 (19400): Removing VM from VirtualBox.
03:20:35 (19400): called boinc_finish(0)

</stderr_txt>
]]>

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