Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:26:26 (32846): wrapper (7.7.26015): starting
08:26:26 (32846): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:26:26] Arguments: --nthreads 8
[2025-06-04 08:26:26] Threads: 8
[2025-06-04 08:26:26] Checking for CVMFS
[2025-06-04 08:26:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:26:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:26:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:26:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:26:28] 2.11.2.0 5309 11363 158176 146780 2 360 13860795 18432000 17597 130560 0 65124314 99.740 32975524 64377 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 08:26:28] CVMFS is ok
[2025-06-04 08:26:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:26:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:26:28] Further information can be found at the LHC@home message board.
[2025-06-04 08:26:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:26:28] Checking for apptainer binary...
[2025-06-04 08:26:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:26:28] Running /usr/bin/apptainer --version
[2025-06-04 08:26:28] apptainer version 1.3.2-1.el7
[2025-06-04 08:26:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:26:33] c-212-7.aglt2.org
[2025-06-04 08:26:33] apptainer works
[2025-06-04 08:26:33] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:26:33] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:26:33] Starting ATLAS job with PandaID=6678646973
[2025-06-04 08:26:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:20:21]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:20:21] 2025-06-04 14:20:03,322 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:20:21] 2025-06-04 14:20:03,322 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:20:21] 2025-06-04 14:20:03,322 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:20:21] 2025-06-04 14:20:03,322 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:20:21] 2025-06-04 14:20:03,324 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:20:21] 2025-06-04 14:20:03,325 | INFO     | sum of square deviations: 390589894.96296275
[2025-06-04 10:20:21] 2025-06-04 14:20:03,325 | INFO     | sum of deviations: 14050674173.518515
[2025-06-04 10:20:21] 2025-06-04 14:20:03,325 | INFO     | mean x: 1749043454.5185184
[2025-06-04 10:20:21] 2025-06-04 14:20:03,325 | INFO     | mean y: 2466162.2407407407
[2025-06-04 10:20:21] 2025-06-04 14:20:03,325 | INFO     | -- intersect: -62915801851.567635
[2025-06-04 10:20:21] 2025-06-04 14:20:03,325 | INFO     | intersect: -62915801851.567635
[2025-06-04 10:20:21] 2025-06-04 14:20:03,326 | INFO     | chi2: 1.9231827508443664
[2025-06-04 10:20:21] 2025-06-04 14:20:03,326 | INFO     | sum of square deviations: 338806444.99029166
[2025-06-04 10:20:21] 2025-06-04 14:20:03,326 | INFO     | sum of deviations: 13612228783.932043
[2025-06-04 10:20:21] 2025-06-04 14:20:03,326 | INFO     | mean x: 1749043302.0097086
[2025-06-04 10:20:21] 2025-06-04 14:20:03,327 | INFO     | mean y: 2464870.067961165
[2025-06-04 10:20:21] 2025-06-04 14:20:03,327 | INFO     | -- intersect: -70268859456.84181
[2025-06-04 10:20:21] 2025-06-04 14:20:03,327 | INFO     | intersect: -70268859456.84181
[2025-06-04 10:20:21] 2025-06-04 14:20:03,327 | INFO     | chi2: 1.927268213619651
[2025-06-04 10:20:21] 2025-06-04 14:20:03,327 | INFO     | current chi2=1.927268213619651 (change=-0.21243237406798426 %)
[2025-06-04 10:20:21] 2025-06-04 14:20:03,327 | INFO     | right removable region: 102
[2025-06-04 10:20:21] 2025-06-04 14:20:03,327 | INFO     | sum of square deviations: 338811569.9611645
[2025-06-04 10:20:21] 2025-06-04 14:20:03,328 | INFO     | sum of deviations: -5562918464.621361
[2025-06-04 10:20:21] 2025-06-04 14:20:03,328 | INFO     | mean x: 1749043607.0194175
[2025-06-04 10:20:21] 2025-06-04 14:20:03,328 | INFO     | mean y: 2522939.3106796117
[2025-06-04 10:20:21] 2025-06-04 14:20:03,328 | INFO     | -- intersect: 28719921751.964924
[2025-06-04 10:20:21] 2025-06-04 14:20:03,328 | INFO     | intersect: 28719921751.964924
[2025-06-04 10:20:21] 2025-06-04 14:20:03,328 | INFO     | chi2: 0.07756600937831926
[2025-06-04 10:20:21] 2025-06-04 14:20:03,328 | INFO     | current chi2=0.07756600937831926 (change=95.96678946167418 %)
[2025-06-04 10:20:21] 2025-06-04 14:20:03,328 | INFO     | sum of square deviations: 291824032.4591833
[2025-06-04 10:20:21] 2025-06-04 14:20:03,329 | INFO     | sum of deviations: -8708915380.102043
[2025-06-04 10:20:21] 2025-06-04 14:20:03,329 | INFO     | mean x: 1749043759.5204082
[2025-06-04 10:20:21] 2025-06-04 14:20:03,329 | INFO     | mean y: 2533154.551020408
[2025-06-04 10:20:21] 2025-06-04 14:20:03,329 | INFO     | -- intersect: 52199310676.25593
[2025-06-04 10:20:21] 2025-06-04 14:20:03,329 | INFO     | intersect: 52199310676.25593
[2025-06-04 10:20:21] 2025-06-04 14:20:03,329 | INFO     | chi2: 0.020101213340475998
[2025-06-04 10:20:21] 2025-06-04 14:20:03,329 | INFO     | current chi2=0.020101213340475998 (change=74.08502319303982 %)
[2025-06-04 10:20:21] 2025-06-04 14:20:03,330 | INFO     | sum of square deviations: 249394719.9569894
[2025-06-04 10:20:21] 2025-06-04 14:20:03,330 | INFO     | sum of deviations: -7367234394.043011
[2025-06-04 10:20:21] 2025-06-04 14:20:03,330 | INFO     | mean x: 1749043912.0215054
[2025-06-04 10:20:21] 2025-06-04 14:20:03,330 | INFO     | mean y: 2528297.0215053763
[2025-06-04 10:20:21] 2025-06-04 14:20:03,330 | INFO     | -- intersect: 51670087528.26195
[2025-06-04 10:20:21] 2025-06-04 14:20:03,330 | INFO     | intersect: 51670087528.26195
[2025-06-04 10:20:21] 2025-06-04 14:20:03,330 | INFO     | chi2: 0.019654806715197815
[2025-06-04 10:20:21] 2025-06-04 14:20:03,331 | INFO     | current chi2=0.019654806715197815 (change=2.2207944252762823 %)
[2025-06-04 10:20:21] 2025-06-04 14:20:03,331 | INFO     | left removable region: 30
[2025-06-04 10:20:21] 2025-06-04 14:20:03,331 | INFO     | sum of square deviations: 115715841.9861112
[2025-06-04 10:20:21] 2025-06-04 14:20:03,331 | INFO     | sum of deviations: -2171297326.611111
[2025-06-04 10:20:21] 2025-06-04 14:20:03,331 | INFO     | mean x: 1749044186.5138888
[2025-06-04 10:20:21] 2025-06-04 14:20:03,331 | INFO     | mean y: 2507245.611111111
[2025-06-04 10:20:21] 2025-06-04 14:20:03,331 | INFO     | -- intersect: 32821651980.85083
[2025-06-04 10:20:21] 2025-06-04 14:20:03,331 | INFO     | intersect: 32821651980.85083
[2025-06-04 10:20:21] 2025-06-04 14:20:03,332 | INFO     | chi2: 0.0068962503494734645
[2025-06-04 10:20:21] 2025-06-04 14:20:03,332 | INFO     | -- intersect: 32821651980.85083
[2025-06-04 10:20:21] 2025-06-04 14:20:03,332 | INFO     | current memory leak: -18.76 B/s (using 72 data points, chi2=0.01)
[2025-06-04 10:20:21] 2025-06-04 14:20:03,332 | INFO     | ..............................
[2025-06-04 10:20:21] 2025-06-04 14:20:03,332 | INFO     | . Timing measurements:
[2025-06-04 10:20:21] 2025-06-04 14:20:03,332 | INFO     | . get job = 0 s
[2025-06-04 10:20:21] 2025-06-04 14:20:03,332 | INFO     | . initial setup = 3 s
[2025-06-04 10:20:21] 2025-06-04 14:20:03,332 | INFO     | . payload setup = 48 s
[2025-06-04 10:20:21] 2025-06-04 14:20:03,332 | INFO     | . stage-in = 0 s
[2025-06-04 10:20:21] 2025-06-04 14:20:03,333 | INFO     | . payload execution = 6612 s
[2025-06-04 10:20:21] 2025-06-04 14:20:03,333 | INFO     | . stage-out = 1 s
[2025-06-04 10:20:21] 2025-06-04 14:20:03,333 | INFO     | . log creation = 0 s
[2025-06-04 10:20:21] 2025-06-04 14:20:03,333 | INFO     | ..............................
[2025-06-04 10:20:21] 2025-06-04 14:20:03,408 | INFO     | 
[2025-06-04 10:20:21] 2025-06-04 14:20:03,408 | INFO     | job summary report
[2025-06-04 10:20:21] 2025-06-04 14:20:03,408 | INFO     | --------------------------------------------------
[2025-06-04 10:20:21] 2025-06-04 14:20:03,408 | INFO     | PanDA job id: 6678646973
[2025-06-04 10:20:21] 2025-06-04 14:20:03,408 | INFO     | task id: 45006595
[2025-06-04 10:20:21] 2025-06-04 14:20:03,408 | INFO     | errors: (none)
[2025-06-04 10:20:21] 2025-06-04 14:20:03,408 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:20:21] 2025-06-04 14:20:03,408 | INFO     | pilot state: finished 
[2025-06-04 10:20:21] 2025-06-04 14:20:03,408 | INFO     | transexitcode: 0
[2025-06-04 10:20:21] 2025-06-04 14:20:03,408 | INFO     | exeerrorcode: 0
[2025-06-04 10:20:21] 2025-06-04 14:20:03,408 | INFO     | exeerrordiag: 
[2025-06-04 10:20:21] 2025-06-04 14:20:03,408 | INFO     | exitcode: 0
[2025-06-04 10:20:21] 2025-06-04 14:20:03,409 | INFO     | exitmsg: OK
[2025-06-04 10:20:21] 2025-06-04 14:20:03,409 | INFO     | cpuconsumptiontime: 30745 s
[2025-06-04 10:20:21] 2025-06-04 14:20:03,409 | INFO     | nevents: 400
[2025-06-04 10:20:21] 2025-06-04 14:20:03,409 | INFO     | neventsw: 0
[2025-06-04 10:20:21] 2025-06-04 14:20:03,409 | INFO     | pid: 44380
[2025-06-04 10:20:21] 2025-06-04 14:20:03,409 | INFO     | pgrp: 44380
[2025-06-04 10:20:21] 2025-06-04 14:20:03,409 | INFO     | corecount: 8
[2025-06-04 10:20:21] 2025-06-04 14:20:03,409 | INFO     | event service: False
[2025-06-04 10:20:21] 2025-06-04 14:20:03,409 | INFO     | sizes: {0: 2397290, 1: 2397290, 11: 2397318, 22: 2397346, 31: 2397580, 33: 2397608, 6665: 2424765, 6667: 2433706, 6670: 2433762, 6702: 2433932}
[2025-06-04 10:20:21] 2025-06-04 14:20:03,409 | INFO     | --------------------------------------------------
[2025-06-04 10:20:21] 2025-06-04 14:20:03,409 | INFO     | 
[2025-06-04 10:20:21] 2025-06-04 14:20:03,409 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 10:20:21] 2025-06-04 14:20:03,430 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:20:21] 2025-06-04 14:20:03,430 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:20:21] 2025-06-04 14:20:03,430 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:20:21] 2025-06-04 14:20:03,430 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:20:21] 2025-06-04 14:20:03,430 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:20:21] 2025-06-04 14:20:03,430 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:20:21] 2025-06-04 14:20:03,430 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:20:21] 2025-06-04 14:20:03,431 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:20:21] 2025-06-04 14:20:03,431 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:20:21] 2025-06-04 14:20:03,431 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:20:21] 2025-06-04 14:20:03,431 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:20:21] 2025-06-04 14:20:03,431 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:20:21] 2025-06-04 14:20:03,431 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:20:21] 2025-06-04 14:20:03,431 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:20:21] 2025-06-04 14:20:03,431 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:20:21] 2025-06-04 14:20:03,431 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:20:21] 2025-06-04 14:20:03,431 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:20:21] 2025-06-04 14:20:03,431 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:20:21] 2025-06-04 14:20:03,431 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:20:21] 2025-06-04 14:20:03,431 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:20:21] 2025-06-04 14:20:03,432 | INFO     | job 6678646973 has completed (purged errors)
[2025-06-04 10:20:21] 2025-06-04 14:20:03,432 | INFO     | overall cleanup function is called
[2025-06-04 10:20:21] 2025-06-04 14:20:04,440 | INFO     | --- collectZombieJob: --- 10, [44380]
[2025-06-04 10:20:21] 2025-06-04 14:20:04,440 | INFO     | zombie collector waiting for pid 44380
[2025-06-04 10:20:21] 2025-06-04 14:20:04,440 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:20:21] 2025-06-04 14:20:04,440 | INFO     | collected zombie processes
[2025-06-04 10:20:21] 2025-06-04 14:20:04,440 | INFO     | will attempt to kill all subprocesses of pid=44380
[2025-06-04 10:20:21] 2025-06-04 14:20:04,699 | INFO     | process IDs to be killed: [44380] (in reverse order)
[2025-06-04 10:20:21] 2025-06-04 14:20:05,158 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:20:21] 2025-06-04 14:20:05,159 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:20:21] 2025-06-04 14:20:05,168 | INFO     | did not find any defunct processes belonging to 44380
[2025-06-04 10:20:21] 2025-06-04 14:20:05,175 | INFO     | did not find any defunct processes belonging to 44380
[2025-06-04 10:20:21] 2025-06-04 14:20:05,175 | INFO     | ready for new job
[2025-06-04 10:20:21] 2025-06-04 14:20:05,175 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:20:21] 2025-06-04 14:20:05,177 | INFO     | **************************************
[2025-06-04 10:20:21] 2025-06-04 14:20:05,177 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:20:21] 2025-06-04 14:20:05,177 | INFO     | **************************************
[2025-06-04 10:20:21] 2025-06-04 14:20:05,177 | INFO     | 
[2025-06-04 10:20:21] 2025-06-04 14:20:05,181 | INFO     | architecture information:
[2025-06-04 10:20:21] 2025-06-04 14:20:05,181 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:20:21] 2025-06-04 14:20:05,245 | INFO     | cat /etc/os-release:
[2025-06-04 10:20:21] NAME="CentOS Linux"
[2025-06-04 10:20:21] VERSION="7 (Core)"
[2025-06-04 10:20:21] ID="centos"
[2025-06-04 10:20:21] ID_LIKE="rhel fedora"
[2025-06-04 10:20:21] VERSION_ID="7"
[2025-06-04 10:20:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:20:21] ANSI_COLOR="0;31"
[2025-06-04 10:20:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:20:21] HOME_URL="https://www.centos.org/"
[2025-06-04 10:20:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:20:21] 
[2025-06-04 10:20:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:20:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:20:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:20:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:20:21] 
[2025-06-04 10:20:21] 2025-06-04 14:20:05,245 | INFO     | **************************************
[2025-06-04 10:20:21] 2025-06-04 14:20:05,748 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 10:20:21] 2025-06-04 14:20:05,767 | INFO     | sufficient remaining disk space (104050196480 B)
[2025-06-04 10:20:21] 2025-06-04 14:20:05,767 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:20:21] 2025-06-04 14:20:05,768 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:20:21] 2025-06-04 14:20:05,768 | INFO     | update_server=False
[2025-06-04 10:20:21] 2025-06-04 14:20:05,768 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:20:21] 2025-06-04 14:20:05,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:20:21] 2025-06-04 14:20:05,768 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:20:21] 2025-06-04 14:20:05,769 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:20:21] 2025-06-04 14:20:05,769 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:20:21] 2025-06-04 14:20:05,769 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:20:21] 2025-06-04 14:20:05,833 | INFO     | all job control threads have been joined
[2025-06-04 10:20:21] 2025-06-04 14:20:06,073 | INFO     | all data control threads have been joined
[2025-06-04 10:20:21] 2025-06-04 14:20:06,208 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 10:20:21] 2025-06-04 14:20:06,208 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 10:20:21] 2025-06-04 14:20:06,208 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:20:21] 2025-06-04 14:20:06,208 | INFO     | will abort loop
[2025-06-04 10:20:21] 2025-06-04 14:20:06,477 | INFO     | all payload control threads have been joined
[2025-06-04 10:20:21] 2025-06-04 14:20:06,774 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:20:21] 2025-06-04 14:20:06,839 | INFO     | [job] control thread has finished
[2025-06-04 10:20:21] 2025-06-04 14:20:07,079 | INFO     | [data] control thread has finished
[2025-06-04 10:20:21] 2025-06-04 14:20:07,214 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:20:21] 2025-06-04 14:20:07,401 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:20:21] 2025-06-04 14:20:07,483 | INFO     | [payload] control thread has finished
[2025-06-04 10:20:21] 2025-06-04 14:20:07,775 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:20:21] 2025-06-04 14:20:07,825 | INFO     | [job] validate thread has finished
[2025-06-04 10:20:21] 2025-06-04 14:20:07,926 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:20:21] 2025-06-04 14:20:07,937 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:20:21] 2025-06-04 14:20:07,984 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:20:21] 2025-06-04 14:20:08,020 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:20:21] 2025-06-04 14:20:08,027 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:20:21] 2025-06-04 14:20:08,178 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:20:21] 2025-06-04 14:20:08,422 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:20:21] 2025-06-04 14:20:09,070 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:20:21] 2025-06-04 14:20:09,428 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:20:21] 2025-06-04 14:20:13,079 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:20:21] 2025-06-04 14:20:14,261 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140484364654400)>', '<ExcThread(monitor, started 140483934279424)>']
[2025-06-04 10:20:21] 2025-06-04 14:20:14,822 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:20:21] 2025-06-04 14:20:14,822 | INFO     | [monitor] control thread has ended
[2025-06-04 10:20:21] 2025-06-04 14:20:19,287 | INFO     | all workflow threads have been joined
[2025-06-04 10:20:21] 2025-06-04 14:20:19,290 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:20:21] 2025-06-04 14:20:19,290 | INFO     | traces error code: 0
[2025-06-04 10:20:21] 2025-06-04 14:20:19,290 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:20:21] 2025-06-04 14:20:19,761 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:20:21] 2025-06-04 14:20:19,798 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:20:21] 2025-06-04 14:20:19,840 [wrapper] pilotpid: 36708
[2025-06-04 10:20:21] 2025-06-04 14:20:19,873 [wrapper] Pilot exit status: 0
[2025-06-04 10:20:21] 2025-06-04 14:20:20,049 [wrapper] pandaids: 6678646973
[2025-06-04 10:20:21] 2025-06-04 14:20:20,460 [wrapper] cleanup supervisor_pilot 88063 36709
[2025-06-04 10:20:21] 2025-06-04 14:20:20,502 [wrapper] Test setup, not cleaning
[2025-06-04 10:20:21] 2025-06-04 14:20:20,538 [wrapper] apfmon messages muted
[2025-06-04 10:20:21] 2025-06-04 14:20:20,570 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:20:21] 2025-06-04 14:20:20,603 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:20:21]  *** Error codes and diagnostics ***
[2025-06-04 10:20:21]     "exeErrorCode": 0,
[2025-06-04 10:20:21]     "exeErrorDiag": "",
[2025-06-04 10:20:21]     "pilotErrorCode": 0,
[2025-06-04 10:20:21]     "pilotErrorDiag": "",
[2025-06-04 10:20:21]  *** Listing of results directory ***
[2025-06-04 10:20:21] total 387260
[2025-06-04 10:20:21] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 10:20:21] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:46 queuedata.json
[2025-06-04 10:20:21] -rwx------ 1 boincer umatlas     37140 Jun  4 03:48 runpilot2-wrapper.sh
[2025-06-04 10:20:21] -rw-r--r-- 1 boincer umatlas       100 Jun  4 08:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:20:21] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 08:26 run_atlas
[2025-06-04 10:20:21] -rw-r--r-- 1 boincer umatlas       105 Jun  4 08:26 job.xml
[2025-06-04 10:20:21] -rw-r--r-- 2 boincer umatlas 213684390 Jun  4 08:26 EVNT.45006593._000945.pool.root.1
[2025-06-04 10:20:21] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:26 start_atlas.sh
[2025-06-04 10:20:21] drwxrwx--x 2 boincer umatlas      4096 Jun  4 08:26 shared
[2025-06-04 10:20:21] -rw-r--r-- 2 boincer umatlas    508887 Jun  4 08:26 input.tar.gz
[2025-06-04 10:20:21] -rw-r--r-- 1 boincer umatlas         0 Jun  4 08:26 boinc_lockfile
[2025-06-04 10:20:21] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 08:26 pandaJob.out
[2025-06-04 10:20:21] -rw------- 1 boincer umatlas    986811 Jun  4 08:27 agis_schedconf.cvmfs.json
[2025-06-04 10:20:21] -rw------- 1 boincer umatlas   1598969 Jun  4 08:27 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:20:21] drwx------ 4 boincer umatlas      4096 Jun  4 08:27 pilot3
[2025-06-04 10:20:21] -rw-r--r-- 1 boincer umatlas      6386 Jun  4 10:11 init_data.xml
[2025-06-04 10:20:21] -rw------- 1 boincer umatlas 177148480 Jun  4 10:18 HITS.45006595._055472.pool.root.1
[2025-06-04 10:20:21] -rw-r--r-- 1 boincer umatlas       529 Jun  4 10:18 boinc_task_state.xml
[2025-06-04 10:20:21] -rw------- 1 boincer umatlas      1073 Jun  4 10:19 memory_monitor_summary.json
[2025-06-04 10:20:21] -rw------- 1 boincer umatlas    315324 Jun  4 10:19 log.45006595._055472.job.log.tgz.1
[2025-06-04 10:20:21] -rw------- 1 boincer umatlas        95 Jun  4 10:19 pilot_heartbeat.json
[2025-06-04 10:20:21] -rw------- 1 boincer umatlas      7741 Jun  4 10:20 heartbeat.json
[2025-06-04 10:20:21] -rw------- 1 boincer umatlas      4663 Jun  4 10:20 pilotlog.txt
[2025-06-04 10:20:21] -rw------- 1 boincer umatlas    632784 Jun  4 10:20 log.45006595._055472.job.log.1
[2025-06-04 10:20:21] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:20 boinc_mmap_file
[2025-06-04 10:20:21] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:20 wrapper_checkpoint.txt
[2025-06-04 10:20:21] -rw------- 1 boincer umatlas       357 Jun  4 10:20 output.list
[2025-06-04 10:20:21] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:20 runtime_log
[2025-06-04 10:20:21] -rw------- 1 boincer umatlas    962560 Jun  4 10:20 result.tar.gz
[2025-06-04 10:20:21] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 10:20 runtime_log.err
[2025-06-04 10:20:21] -rw------- 1 boincer umatlas       657 Jun  4 10:20 lS5NDmD2xg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIknKDmWLRISo.diag
[2025-06-04 10:20:21] -rw-r--r-- 1 boincer umatlas     20925 Jun  4 10:20 stderr.txt
[2025-06-04 10:20:22] HITS file was successfully produced:
[2025-06-04 10:20:22] -rw------- 1 boincer umatlas 177148480 Jun  4 10:18 shared/HITS.pool.root.1
[2025-06-04 10:20:22]  *** Contents of shared directory: ***
[2025-06-04 10:20:22] total 383140
[2025-06-04 10:20:22] -rw-r--r-- 2 boincer umatlas 213684390 Jun  4 08:26 ATLAS.root_0
[2025-06-04 10:20:22] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:26 start_atlas.sh
[2025-06-04 10:20:22] -rw-r--r-- 2 boincer umatlas    508887 Jun  4 08:26 input.tar.gz
[2025-06-04 10:20:22] -rw------- 1 boincer umatlas 177148480 Jun  4 10:18 HITS.pool.root.1
[2025-06-04 10:20:22] -rw------- 1 boincer umatlas    962560 Jun  4 10:20 result.tar.gz
10:20:23 (32846): run_atlas exited; CPU time 30502.885962
10:20:23 (32846): called boinc_finish(0)

</stderr_txt>
]]>

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