Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:13:31 (3497322): wrapper (7.7.26015): starting
08:13:31 (3497322): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:13:31] Arguments: --nthreads 8
[2025-06-04 08:13:31] Threads: 8
[2025-06-04 08:13:31] Checking for CVMFS
[2025-06-04 08:13:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:13:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:13:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:13:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:13:31] 2.12.6.0 46158 23755 413644 146779 2 856 21430068 40960000 48310 16776704 0 367427457 99.775 212699157 34096 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:13:31] CVMFS is ok
[2025-06-04 08:13:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:13:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:13:31] Further information can be found at the LHC@home message board.
[2025-06-04 08:13:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:13:31] Checking for apptainer binary...
[2025-06-04 08:13:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:13:31] Running /usr/bin/apptainer --version
[2025-06-04 08:13:31] apptainer version 1.4.1-1.el9
[2025-06-04 08:13:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:13:31] c8-6-11.aglt2.org
[2025-06-04 08:13:31] apptainer works
[2025-06-04 08:13:31] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:13:31] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:13:31] Starting ATLAS job with PandaID=6678761459
[2025-06-04 08:13:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:05:03]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:05:03]  is_altstaged=None
[2025-06-04 09:05:03]  is_tar=False
[2025-06-04 09:05:03]  lfn=log.45006595._055564.job.log.tgz.1
[2025-06-04 09:05:03]  mtime=0
[2025-06-04 09:05:03]  protocol_id=None
[2025-06-04 09:05:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:05:03]  replicas=None
[2025-06-04 09:05:03]  scope=mc23_13p6TeV
[2025-06-04 09:05:03]  status=None
[2025-06-04 09:05:03]  status_code=0
[2025-06-04 09:05:03]  storage_token=
[2025-06-04 09:05:03]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678761459/log.45006595._055564.job.log.tgz.1
[2025-06-04 09:05:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/f2/log.45006595._055564.job.log.tgz.1
[2025-06-04 09:05:03]  workdir=None
[2025-06-04 09:05:03] ]
[2025-06-04 09:05:03] 2025-06-04 13:04:37,148 | INFO     | transferring file log.45006595._055564.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678761459/log.45006595._055564.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:05:03] 2025-06-04 13:04:37,148 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678761459/log.45006595._055564.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._055564.job
[2025-06-04 09:05:03] 2025-06-04 13:04:37,166 | INFO     | adding to output.list: log.45006595._055564.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/f2/log.45006595._055564.job.log.tg
[2025-06-04 09:05:03] 2025-06-04 13:04:37,167 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:05:03] 2025-06-04 13:04:37,167 | INFO     | summary of transferred files:
[2025-06-04 09:05:03] 2025-06-04 13:04:37,167 | INFO     |  -- lfn=log.45006595._055564.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:05:03] 2025-06-04 13:04:37,167 | INFO     | stage-out finished correctly
[2025-06-04 09:05:03] 2025-06-04 13:04:37,466 | WARNING  | process 3535651 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:05:03] 2025-06-04 13:04:37,466 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678761459/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:05:03] 2025-06-04 13:04:38,093 | INFO     | number of running child processes to parent process 3535651: 1
[2025-06-04 09:05:03] 2025-06-04 13:04:38,095 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:05:03] 2025-06-04 13:04:39,536 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:05:03] 2025-06-04 13:04:39,596 | INFO     | job 6678761459 has state=finished
[2025-06-04 09:05:03] 2025-06-04 13:04:39,596 | INFO     | preparing for final server update for job 6678761459 in state='finished'
[2025-06-04 09:05:03] 2025-06-04 13:04:39,597 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:05:03] 2025-06-04 13:04:39,597 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:05:03] 2025-06-04 13:04:39,597 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:05:03] 2025-06-04 13:04:39,597 | INFO     | job 6678761459 has finished - writing final server update
[2025-06-04 09:05:03] 2025-06-04 13:04:39,597 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:05:03] 2025-06-04 13:04:39,616 | INFO     | executing command: lscpu
[2025-06-04 09:05:03] 2025-06-04 13:04:39,708 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:05:03] 2025-06-04 13:04:40,599 | INFO     | monitor loop #219: job 0:6678761459 is in state 'finished'
[2025-06-04 09:05:03] 2025-06-04 13:04:40,600 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:05:03] 2025-06-04 13:04:43,103 | INFO     | monitor loop #220: job 0:6678761459 is in state 'finished'
[2025-06-04 09:05:03] 2025-06-04 13:04:43,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:05:03] 2025-06-04 13:04:44,439 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:05:03] 2025-06-04 13:04:44,441 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678761459/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:05:03] 2025-06-04 13:04:44,442 | INFO     | extracted standard info from prmon json
[2025-06-04 09:05:03] 2025-06-04 13:04:44,442 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:05:03] 2025-06-04 13:04:44,442 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:05:03] 2025-06-04 13:04:44,442 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:05:03] 2025-06-04 13:04:44,442 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:05:03] 2025-06-04 13:04:44,443 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:05:03] 2025-06-04 13:04:44,443 | INFO     | sum of square deviations: 24640462.0
[2025-06-04 09:05:03] 2025-06-04 13:04:44,443 | INFO     | sum of deviations: 5112345218.0
[2025-06-04 09:05:03] 2025-06-04 13:04:44,443 | INFO     | mean x: 1749040833.0
[2025-06-04 09:05:03] 2025-06-04 13:04:44,443 | INFO     | mean y: 2222549.2325581396
[2025-06-04 09:05:03] 2025-06-04 13:04:44,443 | INFO     | -- intersect: -362884664014.5943
[2025-06-04 09:05:03] 2025-06-04 13:04:44,443 | INFO     | intersect: -362884664014.5943
[2025-06-04 09:05:03] 2025-06-04 13:04:44,443 | INFO     | chi2: 0.7715800077186465
[2025-06-04 09:05:03] 2025-06-04 13:04:44,443 | INFO     | -- intersect: -362884664014.5943
[2025-06-04 09:05:03] 2025-06-04 13:04:44,443 | INFO     | current memory leak: 207.48 B/s (using 43 data points, chi2=0.77)
[2025-06-04 09:05:03] 2025-06-04 13:04:44,443 | INFO     | ..............................
[2025-06-04 09:05:03] 2025-06-04 13:04:44,443 | INFO     | . Timing measurements:
[2025-06-04 09:05:03] 2025-06-04 13:04:44,443 | INFO     | . get job = 0 s
[2025-06-04 09:05:03] 2025-06-04 13:04:44,443 | INFO     | . initial setup = 2 s
[2025-06-04 09:05:03] 2025-06-04 13:04:44,443 | INFO     | . payload setup = 6 s
[2025-06-04 09:05:03] 2025-06-04 13:04:44,443 | INFO     | . stage-in = 0 s
[2025-06-04 09:05:03] 2025-06-04 13:04:44,444 | INFO     | . payload execution = 3028 s
[2025-06-04 09:05:03] 2025-06-04 13:04:44,444 | INFO     | . stage-out = 0 s
[2025-06-04 09:05:03] 2025-06-04 13:04:44,444 | INFO     | . log creation = 0 s
[2025-06-04 09:05:03] 2025-06-04 13:04:44,444 | INFO     | ..............................
[2025-06-04 09:05:03] 2025-06-04 13:04:44,495 | INFO     | 
[2025-06-04 09:05:03] 2025-06-04 13:04:44,496 | INFO     | job summary report
[2025-06-04 09:05:03] 2025-06-04 13:04:44,496 | INFO     | --------------------------------------------------
[2025-06-04 09:05:03] 2025-06-04 13:04:44,496 | INFO     | PanDA job id: 6678761459
[2025-06-04 09:05:03] 2025-06-04 13:04:44,496 | INFO     | task id: 45006595
[2025-06-04 09:05:03] 2025-06-04 13:04:44,496 | INFO     | errors: (none)
[2025-06-04 09:05:03] 2025-06-04 13:04:44,496 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:05:03] 2025-06-04 13:04:44,496 | INFO     | pilot state: finished 
[2025-06-04 09:05:03] 2025-06-04 13:04:44,496 | INFO     | transexitcode: 0
[2025-06-04 09:05:03] 2025-06-04 13:04:44,496 | INFO     | exeerrorcode: 0
[2025-06-04 09:05:03] 2025-06-04 13:04:44,496 | INFO     | exeerrordiag: 
[2025-06-04 09:05:03] 2025-06-04 13:04:44,496 | INFO     | exitcode: 0
[2025-06-04 09:05:03] 2025-06-04 13:04:44,496 | INFO     | exitmsg: OK
[2025-06-04 09:05:03] 2025-06-04 13:04:44,496 | INFO     | cpuconsumptiontime: 19169 s
[2025-06-04 09:05:03] 2025-06-04 13:04:44,496 | INFO     | nevents: 400
[2025-06-04 09:05:03] 2025-06-04 13:04:44,496 | INFO     | neventsw: 0
[2025-06-04 09:05:03] 2025-06-04 13:04:44,496 | INFO     | pid: 3535651
[2025-06-04 09:05:03] 2025-06-04 13:04:44,496 | INFO     | pgrp: 3535651
[2025-06-04 09:05:03] 2025-06-04 13:04:44,496 | INFO     | corecount: 8
[2025-06-04 09:05:03] 2025-06-04 13:04:44,497 | INFO     | event service: False
[2025-06-04 09:05:03] 2025-06-04 13:04:44,497 | INFO     | sizes: {0: 2397290, 4: 2397496, 11: 2397524, 3038: 2422968, 3040: 2431909, 3043: 2431965, 3048: 2432263}
[2025-06-04 09:05:03] 2025-06-04 13:04:44,497 | INFO     | --------------------------------------------------
[2025-06-04 09:05:03] 2025-06-04 13:04:44,497 | INFO     | 
[2025-06-04 09:05:03] 2025-06-04 13:04:44,497 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 09:05:03] 2025-06-04 13:04:44,516 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:05:03] 2025-06-04 13:04:44,516 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | job 6678761459 has completed (purged errors)
[2025-06-04 09:05:03] 2025-06-04 13:04:44,517 | INFO     | overall cleanup function is called
[2025-06-04 09:05:03] 2025-06-04 13:04:45,525 | INFO     | --- collectZombieJob: --- 10, [3535651]
[2025-06-04 09:05:03] 2025-06-04 13:04:45,525 | INFO     | zombie collector waiting for pid 3535651
[2025-06-04 09:05:03] 2025-06-04 13:04:45,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:05:03] 2025-06-04 13:04:45,526 | INFO     | collected zombie processes
[2025-06-04 09:05:03] 2025-06-04 13:04:45,526 | INFO     | will attempt to kill all subprocesses of pid=3535651
[2025-06-04 09:05:03] 2025-06-04 13:04:46,053 | INFO     | process IDs to be killed: [3535651] (in reverse order)
[2025-06-04 09:05:03] 2025-06-04 13:04:46,275 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:05:03] 2025-06-04 13:04:46,276 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:05:03] 2025-06-04 13:04:46,310 | INFO     | did not find any defunct processes belonging to 3535651
[2025-06-04 09:05:03] 2025-06-04 13:04:46,346 | INFO     | did not find any defunct processes belonging to 3535651
[2025-06-04 09:05:03] 2025-06-04 13:04:46,347 | INFO     | ready for new job
[2025-06-04 09:05:03] 2025-06-04 13:04:46,347 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:05:03] 2025-06-04 13:04:46,349 | INFO     | **************************************
[2025-06-04 09:05:03] 2025-06-04 13:04:46,349 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:05:03] 2025-06-04 13:04:46,349 | INFO     | **************************************
[2025-06-04 09:05:03] 2025-06-04 13:04:46,349 | INFO     | 
[2025-06-04 09:05:03] 2025-06-04 13:04:46,368 | INFO     | architecture information:
[2025-06-04 09:05:03] 2025-06-04 13:04:46,368 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:05:03] 2025-06-04 13:04:46,384 | INFO     | cat /etc/os-release:
[2025-06-04 09:05:03] NAME="CentOS Linux"
[2025-06-04 09:05:03] VERSION="7 (Core)"
[2025-06-04 09:05:03] ID="centos"
[2025-06-04 09:05:03] ID_LIKE="rhel fedora"
[2025-06-04 09:05:03] VERSION_ID="7"
[2025-06-04 09:05:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:05:03] ANSI_COLOR="0;31"
[2025-06-04 09:05:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:05:03] HOME_URL="https://www.centos.org/"
[2025-06-04 09:05:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:05:03] 
[2025-06-04 09:05:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:05:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:05:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:05:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:05:03] 
[2025-06-04 09:05:03] 2025-06-04 13:04:46,384 | INFO     | **************************************
[2025-06-04 09:05:03] 2025-06-04 13:04:46,887 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 09:05:03] 2025-06-04 13:04:46,904 | INFO     | sufficient remaining disk space (171915083776 B)
[2025-06-04 09:05:03] 2025-06-04 13:04:46,905 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:05:03] 2025-06-04 13:04:46,905 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:05:03] 2025-06-04 13:04:46,905 | INFO     | update_server=False
[2025-06-04 09:05:03] 2025-06-04 13:04:46,905 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:05:03] 2025-06-04 13:04:46,905 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:05:03] 2025-06-04 13:04:46,906 | INFO     | aborting loop
[2025-06-04 09:05:03] 2025-06-04 13:04:47,007 | INFO     | all job control threads have been joined
[2025-06-04 09:05:03] 2025-06-04 13:04:47,064 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:05:03] 2025-06-04 13:04:47,065 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:05:03] 2025-06-04 13:04:47,065 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:05:03] 2025-06-04 13:04:47,741 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:05:03] 2025-06-04 13:04:47,910 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:05:03] 2025-06-04 13:04:47,911 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:05:03] 2025-06-04 13:04:48,002 | INFO     | all data control threads have been joined
[2025-06-04 09:05:03] 2025-06-04 13:04:48,012 | INFO     | [job] control thread has finished
[2025-06-04 09:05:03] 2025-06-04 13:04:48,057 | INFO     | [job] validate thread has finished
[2025-06-04 09:05:03] 2025-06-04 13:04:48,112 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:05:03] 2025-06-04 13:04:48,337 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:05:03] 2025-06-04 13:04:48,357 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:05:03] 2025-06-04 13:04:48,405 | INFO     | all payload control threads have been joined
[2025-06-04 09:05:03] 2025-06-04 13:04:48,480 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:05:03] 2025-06-04 13:04:48,907 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:05:03] 2025-06-04 13:04:49,007 | INFO     | [data] control thread has finished
[2025-06-04 09:05:03] 2025-06-04 13:04:49,050 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:05:03] 2025-06-04 13:04:49,410 | INFO     | [payload] control thread has finished
[2025-06-04 09:05:03] 2025-06-04 13:04:49,508 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:05:03] 2025-06-04 13:04:49,747 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:05:03] 2025-06-04 13:04:50,103 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:05:03] 2025-06-04 13:04:50,514 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:05:03] 2025-06-04 13:04:54,108 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:05:03] 2025-06-04 13:04:57,149 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:05:03] 2025-06-04 13:04:58,154 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:05:03] 2025-06-04 13:04:58,553 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140314727962432)>', '<ExcThread(monitor, started 140313964312320)>']
[2025-06-04 09:05:03] 2025-06-04 13:04:59,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:05:03] 2025-06-04 13:04:59,125 | INFO     | [monitor] control thread has ended
[2025-06-04 09:05:03] 2025-06-04 13:05:03,578 | INFO     | all workflow threads have been joined
[2025-06-04 09:05:03] 2025-06-04 13:05:03,579 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:05:03] 2025-06-04 13:05:03,579 | INFO     | traces error code: 0
[2025-06-04 09:05:03] 2025-06-04 13:05:03,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:05:03] 2025-06-04 13:05:03,724 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:05:03] 2025-06-04 13:05:03,727 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:05:03] 2025-06-04 13:05:03,731 [wrapper] pilotpid: 3506046
[2025-06-04 09:05:03] 2025-06-04 13:05:03,734 [wrapper] Pilot exit status: 0
[2025-06-04 09:05:03] 2025-06-04 13:05:03,747 [wrapper] pandaids: 6678761459
[2025-06-04 09:05:03] 2025-06-04 13:05:03,904 [wrapper] cleanup supervisor_pilot  679441 3506047
[2025-06-04 09:05:03] 2025-06-04 13:05:03,907 [wrapper] Test setup, not cleaning
[2025-06-04 09:05:03] 2025-06-04 13:05:03,910 [wrapper] apfmon messages muted
[2025-06-04 09:05:03] 2025-06-04 13:05:03,913 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:05:03] 2025-06-04 13:05:03,915 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:05:03]  *** Error codes and diagnostics ***
[2025-06-04 09:05:03]     "exeErrorCode": 0,
[2025-06-04 09:05:03]     "exeErrorDiag": "",
[2025-06-04 09:05:03]     "pilotErrorCode": 0,
[2025-06-04 09:05:03]     "pilotErrorDiag": "",
[2025-06-04 09:05:03]  *** Listing of results directory ***
[2025-06-04 09:05:03] total 385008
[2025-06-04 09:05:03] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 09:05:03] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:51 queuedata.json
[2025-06-04 09:05:03] -rwx------. 1 boincer umatlas     37140 Jun  4 03:55 runpilot2-wrapper.sh
[2025-06-04 09:05:03] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:05:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:13 run_atlas
[2025-06-04 09:05:03] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:13 job.xml
[2025-06-04 09:05:03] -rw-r--r--. 2 boincer umatlas 217010522 Jun  4 08:13 EVNT.45006593._000560.pool.root.1
[2025-06-04 09:05:03] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:13 start_atlas.sh
[2025-06-04 09:05:03] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:13 shared
[2025-06-04 09:05:03] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 08:13 input.tar.gz
[2025-06-04 09:05:03] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:13 boinc_lockfile
[2025-06-04 09:05:03] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 08:13 pandaJob.out
[2025-06-04 09:05:03] -rw-------. 1 boincer umatlas    986812 Jun  4 08:13 agis_schedconf.cvmfs.json
[2025-06-04 09:05:03] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:13 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:05:03] drwx------. 4 boincer umatlas      4096 Jun  4 08:13 pilot3
[2025-06-04 09:05:03] -rw-r--r--. 1 boincer umatlas      7159 Jun  4 09:02 init_data.xml
[2025-06-04 09:05:03] -rw-------. 1 boincer umatlas 172200933 Jun  4 09:04 HITS.45006595._055564.pool.root.1
[2025-06-04 09:05:03] -rw-r--r--. 1 boincer umatlas       530 Jun  4 09:04 boinc_task_state.xml
[2025-06-04 09:05:03] -rw-------. 1 boincer umatlas        95 Jun  4 09:04 pilot_heartbeat.json
[2025-06-04 09:05:03] -rw-------. 1 boincer umatlas      1035 Jun  4 09:04 memory_monitor_summary.json
[2025-06-04 09:05:03] -rw-------. 1 boincer umatlas    281725 Jun  4 09:04 log.45006595._055564.job.log.tgz.1
[2025-06-04 09:05:03] -rw-------. 1 boincer umatlas      7689 Jun  4 09:04 heartbeat.json
[2025-06-04 09:05:03] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:05 boinc_mmap_file
[2025-06-04 09:05:03] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:05 wrapper_checkpoint.txt
[2025-06-04 09:05:03] -rw-------. 1 boincer umatlas      4426 Jun  4 09:05 pilotlog.txt
[2025-06-04 09:05:03] -rw-------. 1 boincer umatlas    318725 Jun  4 09:05 log.45006595._055564.job.log.1
[2025-06-04 09:05:03] -rw-------. 1 boincer umatlas       357 Jun  4 09:05 output.list
[2025-06-04 09:05:03] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:05 runtime_log
[2025-06-04 09:05:03] -rw-------. 1 boincer umatlas    624640 Jun  4 09:05 result.tar.gz
[2025-06-04 09:05:03] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 09:05 runtime_log.err
[2025-06-04 09:05:03] -rw-------. 1 boincer umatlas       650 Jun  4 09:05 l7qLDmC9xg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmllnKDmoGme1m.diag
[2025-06-04 09:05:03] -rw-r--r--. 1 boincer umatlas     21403 Jun  4 09:05 stderr.txt
[2025-06-04 09:05:03] HITS file was successfully produced:
[2025-06-04 09:05:03] -rw-------. 1 boincer umatlas 172200933 Jun  4 09:04 shared/HITS.pool.root.1
[2025-06-04 09:05:04]  *** Contents of shared directory: ***
[2025-06-04 09:05:04] total 381228
[2025-06-04 09:05:04] -rw-r--r--. 2 boincer umatlas 217010522 Jun  4 08:13 ATLAS.root_0
[2025-06-04 09:05:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:13 start_atlas.sh
[2025-06-04 09:05:04] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 08:13 input.tar.gz
[2025-06-04 09:05:04] -rw-------. 1 boincer umatlas 172200933 Jun  4 09:04 HITS.pool.root.1
[2025-06-04 09:05:04] -rw-------. 1 boincer umatlas    624640 Jun  4 09:05 result.tar.gz
09:05:05 (3497322): run_atlas exited; CPU time 19285.877138
09:05:05 (3497322): called boinc_finish(0)

</stderr_txt>
]]>

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