Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:23:28 (25886): wrapper (7.7.26015): starting
08:23:28 (25886): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:23:28] Arguments: --nthreads 8
[2025-06-04 08:23:28] Threads: 8
[2025-06-04 08:23:28] Checking for CVMFS
[2025-06-04 08:23:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:23:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:23:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:23:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:23:28] 2.12.6.0 3854649 23268 459052 146780 2 66 25383444 32935937 9420 16776704 0 110451155 99.677 101488446 32703 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:23:28] CVMFS is ok
[2025-06-04 08:23:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:23:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:23:28] Further information can be found at the LHC@home message board.
[2025-06-04 08:23:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:23:28] Checking for apptainer binary...
[2025-06-04 08:23:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:23:28] Running /usr/bin/apptainer --version
[2025-06-04 08:23:28] apptainer version 1.4.1-1.el9
[2025-06-04 08:23:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:23:28] c6-4-5-3.aglt2.org
[2025-06-04 08:23:28] apptainer works
[2025-06-04 08:23:28] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:23:28] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:23:28] Starting ATLAS job with PandaID=6678508964
[2025-06-04 08:23:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:27:12]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:27:12]  guid=c130370e-2ca4-4ac7-8dc9-d943d5987e51
[2025-06-04 09:27:12]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 09:27:12]  is_altstaged=None
[2025-06-04 09:27:12]  is_tar=False
[2025-06-04 09:27:12]  lfn=log.45006595._055385.job.log.tgz.1
[2025-06-04 09:27:12]  mtime=0
[2025-06-04 09:27:12]  protocol_id=None
[2025-06-04 09:27:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:27:12]  replicas=None
[2025-06-04 09:27:12]  scope=mc23_13p6TeV
[2025-06-04 09:27:12]  status=None
[2025-06-04 09:27:12]  status_code=0
[2025-06-04 09:27:12]  storage_token=
[2025-06-04 09:27:12]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678508964/log.45006595._055385.job.log.tgz.1
[2025-06-04 09:27:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/fc/log.45006595._055385.job.log.tgz.1
[2025-06-04 09:27:12]  workdir=None
[2025-06-04 09:27:12] ]
[2025-06-04 09:27:12] 2025-06-04 13:26:55,051 | INFO     | transferring file log.45006595._055385.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678508964/log.45006595._055385.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:27:12] 2025-06-04 13:26:55,051 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678508964/log.45006595._055385.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._055385.job
[2025-06-04 09:27:12] 2025-06-04 13:26:55,071 | INFO     | adding to output.list: log.45006595._055385.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/fc/log.45006595._055385.job.log.tg
[2025-06-04 09:27:12] 2025-06-04 13:26:55,072 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:27:12] 2025-06-04 13:26:55,072 | INFO     | summary of transferred files:
[2025-06-04 09:27:12] 2025-06-04 13:26:55,072 | INFO     |  -- lfn=log.45006595._055385.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:27:12] 2025-06-04 13:26:55,072 | INFO     | stage-out finished correctly
[2025-06-04 09:27:12] 2025-06-04 13:26:55,162 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:27:12] 2025-06-04 13:26:55,528 | INFO     | monitor loop #286: job 0:6678508964 is in state 'finished'
[2025-06-04 09:27:12] 2025-06-04 13:26:55,528 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:27:12] 2025-06-04 13:26:56,292 | INFO     | job 6678508964 has state=finished
[2025-06-04 09:27:12] 2025-06-04 13:26:56,293 | INFO     | preparing for final server update for job 6678508964 in state='finished'
[2025-06-04 09:27:12] 2025-06-04 13:26:56,365 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 09:27:12] 2025-06-04 13:26:56,366 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:27:12] 2025-06-04 13:26:56,366 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:27:12] 2025-06-04 13:26:56,366 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:27:12] 2025-06-04 13:26:56,366 | INFO     | job 6678508964 has finished - writing final server update
[2025-06-04 09:27:12] 2025-06-04 13:26:56,366 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:27:12] 2025-06-04 13:26:56,382 | INFO     | executing command: lscpu
[2025-06-04 09:27:12] 2025-06-04 13:26:56,453 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:27:12] 2025-06-04 13:26:58,031 | INFO     | monitor loop #287: job 0:6678508964 is in state 'finished'
[2025-06-04 09:27:12] 2025-06-04 13:26:58,032 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:27:12] 2025-06-04 13:26:59,671 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:27:12] 2025-06-04 13:26:59,671 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678508964/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:27:12] 2025-06-04 13:26:59,672 | INFO     | extracted standard info from prmon json
[2025-06-04 09:27:12] 2025-06-04 13:26:59,672 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:27:12] 2025-06-04 13:26:59,673 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:27:12] 2025-06-04 13:26:59,673 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:27:12] 2025-06-04 13:26:59,673 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:27:12] 2025-06-04 13:26:59,674 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:27:12] 2025-06-04 13:26:59,674 | INFO     | sum of square deviations: 51573060.0
[2025-06-04 09:27:12] 2025-06-04 13:26:59,675 | INFO     | sum of deviations: 868568752.0000012
[2025-06-04 09:27:12] 2025-06-04 13:26:59,675 | INFO     | mean x: 1749041792.0
[2025-06-04 09:27:12] 2025-06-04 13:26:59,675 | INFO     | mean y: 2421618.9272727272
[2025-06-04 09:27:12] 2025-06-04 13:26:59,675 | INFO     | -- intersect: -29454101737.904488
[2025-06-04 09:27:12] 2025-06-04 13:26:59,675 | INFO     | intersect: -29454101737.904488
[2025-06-04 09:27:12] 2025-06-04 13:26:59,675 | INFO     | chi2: 0.7260644972435847
[2025-06-04 09:27:12] 2025-06-04 13:26:59,675 | INFO     | -- intersect: -29454101737.904488
[2025-06-04 09:27:12] 2025-06-04 13:26:59,675 | INFO     | current memory leak: 16.84 B/s (using 55 data points, chi2=0.73)
[2025-06-04 09:27:12] 2025-06-04 13:26:59,676 | INFO     | ..............................
[2025-06-04 09:27:12] 2025-06-04 13:26:59,676 | INFO     | . Timing measurements:
[2025-06-04 09:27:12] 2025-06-04 13:26:59,676 | INFO     | . get job = 0 s
[2025-06-04 09:27:12] 2025-06-04 13:26:59,676 | INFO     | . initial setup = 2 s
[2025-06-04 09:27:12] 2025-06-04 13:26:59,676 | INFO     | . payload setup = 5 s
[2025-06-04 09:27:12] 2025-06-04 13:26:59,676 | INFO     | . stage-in = 0 s
[2025-06-04 09:27:12] 2025-06-04 13:26:59,676 | INFO     | . payload execution = 3773 s
[2025-06-04 09:27:12] 2025-06-04 13:26:59,676 | INFO     | . stage-out = 0 s
[2025-06-04 09:27:12] 2025-06-04 13:26:59,676 | INFO     | . log creation = 0 s
[2025-06-04 09:27:12] 2025-06-04 13:26:59,676 | INFO     | ..............................
[2025-06-04 09:27:12] 2025-06-04 13:26:59,762 | INFO     | 
[2025-06-04 09:27:12] 2025-06-04 13:26:59,762 | INFO     | job summary report
[2025-06-04 09:27:12] 2025-06-04 13:26:59,762 | INFO     | --------------------------------------------------
[2025-06-04 09:27:12] 2025-06-04 13:26:59,763 | INFO     | PanDA job id: 6678508964
[2025-06-04 09:27:12] 2025-06-04 13:26:59,763 | INFO     | task id: 45006595
[2025-06-04 09:27:12] 2025-06-04 13:26:59,763 | INFO     | errors: (none)
[2025-06-04 09:27:12] 2025-06-04 13:26:59,763 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:27:12] 2025-06-04 13:26:59,763 | INFO     | pilot state: finished 
[2025-06-04 09:27:12] 2025-06-04 13:26:59,763 | INFO     | transexitcode: 0
[2025-06-04 09:27:12] 2025-06-04 13:26:59,763 | INFO     | exeerrorcode: 0
[2025-06-04 09:27:12] 2025-06-04 13:26:59,763 | INFO     | exeerrordiag: 
[2025-06-04 09:27:12] 2025-06-04 13:26:59,763 | INFO     | exitcode: 0
[2025-06-04 09:27:12] 2025-06-04 13:26:59,763 | INFO     | exitmsg: OK
[2025-06-04 09:27:12] 2025-06-04 13:26:59,763 | INFO     | cpuconsumptiontime: 25234 s
[2025-06-04 09:27:12] 2025-06-04 13:26:59,763 | INFO     | nevents: 400
[2025-06-04 09:27:12] 2025-06-04 13:26:59,763 | INFO     | neventsw: 0
[2025-06-04 09:27:12] 2025-06-04 13:26:59,763 | INFO     | pid: 36919
[2025-06-04 09:27:12] 2025-06-04 13:26:59,763 | INFO     | pgrp: 36919
[2025-06-04 09:27:12] 2025-06-04 13:26:59,763 | INFO     | corecount: 8
[2025-06-04 09:27:12] 2025-06-04 13:26:59,763 | INFO     | event service: False
[2025-06-04 09:27:12] 2025-06-04 13:26:59,764 | INFO     | sizes: {0: 2397176, 1: 2397318, 4: 2397524, 11: 2397552, 3782: 2423342, 3784: 2432467, 3789: 2432581}
[2025-06-04 09:27:12] 2025-06-04 13:26:59,764 | INFO     | --------------------------------------------------
[2025-06-04 09:27:12] 2025-06-04 13:26:59,764 | INFO     | 
[2025-06-04 09:27:12] 2025-06-04 13:26:59,764 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 09:27:12] 2025-06-04 13:26:59,783 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:27:12] 2025-06-04 13:26:59,783 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:27:12] 2025-06-04 13:26:59,783 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:27:12] 2025-06-04 13:26:59,783 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:27:12] 2025-06-04 13:26:59,784 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:27:12] 2025-06-04 13:26:59,784 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:27:12] 2025-06-04 13:26:59,784 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:27:12] 2025-06-04 13:26:59,784 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:27:12] 2025-06-04 13:26:59,784 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:27:12] 2025-06-04 13:26:59,784 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:27:12] 2025-06-04 13:26:59,784 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:27:12] 2025-06-04 13:26:59,784 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:27:12] 2025-06-04 13:26:59,784 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:27:12] 2025-06-04 13:26:59,784 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:27:12] 2025-06-04 13:26:59,784 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:27:12] 2025-06-04 13:26:59,784 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:27:12] 2025-06-04 13:26:59,784 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:27:12] 2025-06-04 13:26:59,784 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:27:12] 2025-06-04 13:26:59,784 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:27:12] 2025-06-04 13:26:59,784 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:27:12] 2025-06-04 13:26:59,785 | INFO     | job 6678508964 has completed (purged errors)
[2025-06-04 09:27:12] 2025-06-04 13:26:59,785 | INFO     | overall cleanup function is called
[2025-06-04 09:27:12] 2025-06-04 13:27:00,792 | INFO     | --- collectZombieJob: --- 10, [36919]
[2025-06-04 09:27:12] 2025-06-04 13:27:00,793 | INFO     | zombie collector waiting for pid 36919
[2025-06-04 09:27:12] 2025-06-04 13:27:00,793 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:27:12] 2025-06-04 13:27:00,793 | INFO     | collected zombie processes
[2025-06-04 09:27:12] 2025-06-04 13:27:00,793 | INFO     | will attempt to kill all subprocesses of pid=36919
[2025-06-04 09:27:12] 2025-06-04 13:27:00,957 | INFO     | process IDs to be killed: [36919] (in reverse order)
[2025-06-04 09:27:12] 2025-06-04 13:27:01,016 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:27:12] 2025-06-04 13:27:01,016 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:27:12] 2025-06-04 13:27:01,024 | INFO     | did not find any defunct processes belonging to 36919
[2025-06-04 09:27:12] 2025-06-04 13:27:01,031 | INFO     | did not find any defunct processes belonging to 36919
[2025-06-04 09:27:12] 2025-06-04 13:27:01,031 | INFO     | ready for new job
[2025-06-04 09:27:12] 2025-06-04 13:27:01,031 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:27:12] 2025-06-04 13:27:01,032 | INFO     | **************************************
[2025-06-04 09:27:12] 2025-06-04 13:27:01,032 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:27:12] 2025-06-04 13:27:01,032 | INFO     | **************************************
[2025-06-04 09:27:12] 2025-06-04 13:27:01,032 | INFO     | 
[2025-06-04 09:27:12] 2025-06-04 13:27:01,046 | INFO     | architecture information:
[2025-06-04 09:27:12] 2025-06-04 13:27:01,046 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:27:12] 2025-06-04 13:27:01,060 | INFO     | cat /etc/os-release:
[2025-06-04 09:27:12] NAME="CentOS Linux"
[2025-06-04 09:27:12] VERSION="7 (Core)"
[2025-06-04 09:27:12] ID="centos"
[2025-06-04 09:27:12] ID_LIKE="rhel fedora"
[2025-06-04 09:27:12] VERSION_ID="7"
[2025-06-04 09:27:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:27:12] ANSI_COLOR="0;31"
[2025-06-04 09:27:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:27:12] HOME_URL="https://www.centos.org/"
[2025-06-04 09:27:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:27:12] 
[2025-06-04 09:27:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:27:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:27:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:27:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:27:12] 
[2025-06-04 09:27:12] 2025-06-04 13:27:01,060 | INFO     | **************************************
[2025-06-04 09:27:12] 2025-06-04 13:27:01,563 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 09:27:12] 2025-06-04 13:27:01,578 | INFO     | sufficient remaining disk space (76083625984 B)
[2025-06-04 09:27:12] 2025-06-04 13:27:01,578 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:27:12] 2025-06-04 13:27:01,579 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:27:12] 2025-06-04 13:27:01,579 | INFO     | update_server=False
[2025-06-04 09:27:12] 2025-06-04 13:27:01,579 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:27:12] 2025-06-04 13:27:01,579 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:27:12] 2025-06-04 13:27:01,579 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:27:12] 2025-06-04 13:27:01,579 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:27:12] 2025-06-04 13:27:01,580 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:27:12] 2025-06-04 13:27:01,580 | INFO     | aborting loop
[2025-06-04 09:27:12] 2025-06-04 13:27:01,770 | INFO     | all data control threads have been joined
[2025-06-04 09:27:12] 2025-06-04 13:27:02,357 | INFO     | all job control threads have been joined
[2025-06-04 09:27:12] 2025-06-04 13:27:02,372 | INFO     | PID=30412 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 09:27:12] 2025-06-04 13:27:02,372 | INFO     | .. there are 24 such processes running
[2025-06-04 09:27:12] 2025-06-04 13:27:02,372 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:27:12] 2025-06-04 13:27:02,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:27:12] 2025-06-04 13:27:02,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:27:12] 2025-06-04 13:27:02,567 | INFO     | all payload control threads have been joined
[2025-06-04 09:27:12] 2025-06-04 13:27:02,584 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:27:12] 2025-06-04 13:27:02,585 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:27:12] 2025-06-04 13:27:02,586 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:27:12] 2025-06-04 13:27:02,715 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:27:12] 2025-06-04 13:27:02,772 | INFO     | [data] control thread has finished
[2025-06-04 09:27:12] 2025-06-04 13:27:02,987 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:27:12] 2025-06-04 13:27:03,151 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:27:12] 2025-06-04 13:27:03,263 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:27:12] 2025-06-04 13:27:03,362 | INFO     | [job] control thread has finished
[2025-06-04 09:27:12] 2025-06-04 13:27:03,572 | INFO     | [payload] control thread has finished
[2025-06-04 09:27:12] 2025-06-04 13:27:03,585 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:27:12] 2025-06-04 13:27:03,758 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:27:12] 2025-06-04 13:27:03,801 | INFO     | [job] validate thread has finished
[2025-06-04 09:27:12] 2025-06-04 13:27:04,039 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:27:12] 2025-06-04 13:27:04,050 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:27:12] 2025-06-04 13:27:05,586 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:27:12] 2025-06-04 13:27:07,138 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139662146672448)>', '<ExcThread(monitor, started 139661506758400)>']
[2025-06-04 09:27:12] 2025-06-04 13:27:07,397 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:27:12] 2025-06-04 13:27:07,397 | INFO     | [monitor] control thread has ended
[2025-06-04 09:27:12] 2025-06-04 13:27:12,163 | INFO     | all workflow threads have been joined
[2025-06-04 09:27:12] 2025-06-04 13:27:12,164 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:27:12] 2025-06-04 13:27:12,164 | INFO     | traces error code: 0
[2025-06-04 09:27:12] 2025-06-04 13:27:12,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:27:12] 2025-06-04 13:27:12,303 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:27:12] 2025-06-04 13:27:12,306 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:27:12] 2025-06-04 13:27:12,308 [wrapper] pilotpid: 30412
[2025-06-04 09:27:12] 2025-06-04 13:27:12,310 [wrapper] Pilot exit status: 0
[2025-06-04 09:27:12] 2025-06-04 13:27:12,318 [wrapper] pandaids: 6678508964
[2025-06-04 09:27:12] 2025-06-04 13:27:12,371 [wrapper] cleanup supervisor_pilot  438989 30413
[2025-06-04 09:27:12] 2025-06-04 13:27:12,374 [wrapper] Test setup, not cleaning
[2025-06-04 09:27:12] 2025-06-04 13:27:12,377 [wrapper] apfmon messages muted
[2025-06-04 09:27:12] 2025-06-04 13:27:12,378 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:27:12] 2025-06-04 13:27:12,380 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:27:12]  *** Error codes and diagnostics ***
[2025-06-04 09:27:12]     "exeErrorCode": 0,
[2025-06-04 09:27:12]     "exeErrorDiag": "",
[2025-06-04 09:27:12]     "pilotErrorCode": 0,
[2025-06-04 09:27:12]     "pilotErrorDiag": "",
[2025-06-04 09:27:12]  *** Listing of results directory ***
[2025-06-04 09:27:12] total 391552
[2025-06-04 09:27:12] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 09:27:12] -rwx------. 1 boincer umatlas     37140 Jun  4 03:46 runpilot2-wrapper.sh
[2025-06-04 09:27:12] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:46 queuedata.json
[2025-06-04 09:27:12] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:27:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:23 run_atlas
[2025-06-04 09:27:12] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:23 job.xml
[2025-06-04 09:27:12] -rw-r--r--. 2 boincer umatlas 217109959 Jun  4 08:23 EVNT.45006593._000545.pool.root.1
[2025-06-04 09:27:12] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:23 start_atlas.sh
[2025-06-04 09:27:12] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:23 shared
[2025-06-04 09:27:12] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 08:23 input.tar.gz
[2025-06-04 09:27:12] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:23 boinc_lockfile
[2025-06-04 09:27:12] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 08:23 pandaJob.out
[2025-06-04 09:27:12] -rw-------. 1 boincer umatlas    986811 Jun  4 08:23 agis_schedconf.cvmfs.json
[2025-06-04 09:27:12] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:23 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:27:12] drwx------. 4 boincer umatlas      4096 Jun  4 08:23 pilot3
[2025-06-04 09:27:12] -rw-r--r--. 1 boincer umatlas      6855 Jun  4 09:21 init_data.xml
[2025-06-04 09:27:12] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:26 boinc_task_state.xml
[2025-06-04 09:27:12] -rw-------. 1 boincer umatlas 178652954 Jun  4 09:26 HITS.45006595._055385.pool.root.1
[2025-06-04 09:27:12] -rw-------. 1 boincer umatlas        95 Jun  4 09:26 pilot_heartbeat.json
[2025-06-04 09:27:12] -rw-------. 1 boincer umatlas      1036 Jun  4 09:26 memory_monitor_summary.json
[2025-06-04 09:27:12] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:26 boinc_mmap_file
[2025-06-04 09:27:12] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:26 wrapper_checkpoint.txt
[2025-06-04 09:27:12] -rw-------. 1 boincer umatlas    291046 Jun  4 09:26 log.45006595._055385.job.log.tgz.1
[2025-06-04 09:27:12] -rw-------. 1 boincer umatlas      7712 Jun  4 09:26 heartbeat.json
[2025-06-04 09:27:12] -rw-------. 1 boincer umatlas      4747 Jun  4 09:27 pilotlog.txt
[2025-06-04 09:27:12] -rw-------. 1 boincer umatlas    385874 Jun  4 09:27 log.45006595._055385.job.log.1
[2025-06-04 09:27:12] -rw-------. 1 boincer umatlas       357 Jun  4 09:27 output.list
[2025-06-04 09:27:12] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:27 runtime_log
[2025-06-04 09:27:12] -rw-------. 1 boincer umatlas    696320 Jun  4 09:27 result.tar.gz
[2025-06-04 09:27:12] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 09:27 runtime_log.err
[2025-06-04 09:27:12] -rw-------. 1 boincer umatlas       650 Jun  4 09:27 PNyNDmG0xg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtinKDmtBOjWo.diag
[2025-06-04 09:27:12] -rw-r--r--. 1 boincer umatlas     21352 Jun  4 09:27 stderr.txt
[2025-06-04 09:27:12] HITS file was successfully produced:
[2025-06-04 09:27:12] -rw-------. 1 boincer umatlas 178652954 Jun  4 09:26 shared/HITS.pool.root.1
[2025-06-04 09:27:12]  *** Contents of shared directory: ***
[2025-06-04 09:27:12] total 387692
[2025-06-04 09:27:12] -rw-r--r--. 2 boincer umatlas 217109959 Jun  4 08:23 ATLAS.root_0
[2025-06-04 09:27:12] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:23 start_atlas.sh
[2025-06-04 09:27:12] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 08:23 input.tar.gz
[2025-06-04 09:27:12] -rw-------. 1 boincer umatlas 178652954 Jun  4 09:26 HITS.pool.root.1
[2025-06-04 09:27:12] -rw-------. 1 boincer umatlas    696320 Jun  4 09:27 result.tar.gz
09:27:13 (25886): run_atlas exited; CPU time 25329.769793
09:27:13 (25886): called boinc_finish(0)

</stderr_txt>
]]>

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