Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:54:16 (3178981): wrapper (7.7.26015): starting
08:54:16 (3178981): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:54:16] Arguments: --nthreads 8
[2025-06-04 08:54:16] Threads: 8
[2025-06-04 08:54:16] Checking for CVMFS
[2025-06-04 08:54:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:54:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:54:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:54:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:54:16] 2.12.6.0 1685548 23321 435748 146780 1 199 26210305 32947201 10175 16776704 0 123251820 99.687 96721287 27315 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:54:16] CVMFS is ok
[2025-06-04 08:54:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:54:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:54:16] Further information can be found at the LHC@home message board.
[2025-06-04 08:54:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:54:16] Checking for apptainer binary...
[2025-06-04 08:54:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:54:16] Running /usr/bin/apptainer --version
[2025-06-04 08:54:16] apptainer version 1.4.1-1.el9
[2025-06-04 08:54:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:54:16] c6-6-8-2.aglt2.org
[2025-06-04 08:54:16] apptainer works
[2025-06-04 08:54:16] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:54:16] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:54:16] Starting ATLAS job with PandaID=6678392061
[2025-06-04 08:54:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:53:52]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:53:52]  is_tar=False
[2025-06-04 09:53:52]  lfn=log.45006595._055090.job.log.tgz.1
[2025-06-04 09:53:52]  mtime=0
[2025-06-04 09:53:52]  protocol_id=None
[2025-06-04 09:53:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:53:52]  replicas=None
[2025-06-04 09:53:52]  scope=mc23_13p6TeV
[2025-06-04 09:53:52]  status=None
[2025-06-04 09:53:52]  status_code=0
[2025-06-04 09:53:52]  storage_token=
[2025-06-04 09:53:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678392061/log.45006595._055090.job.log.tgz.1
[2025-06-04 09:53:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/d2/log.45006595._055090.job.log.tgz.1
[2025-06-04 09:53:52]  workdir=None
[2025-06-04 09:53:52] ]
[2025-06-04 09:53:52] 2025-06-04 13:53:26,735 | INFO     | transferring file log.45006595._055090.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678392061/log.45006595._055090.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:53:52] 2025-06-04 13:53:26,736 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678392061/log.45006595._055090.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._055090.job
[2025-06-04 09:53:52] 2025-06-04 13:53:26,747 | INFO     | adding to output.list: log.45006595._055090.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/d2/log.45006595._055090.job.log.tg
[2025-06-04 09:53:52] 2025-06-04 13:53:26,748 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:53:52] 2025-06-04 13:53:26,748 | INFO     | summary of transferred files:
[2025-06-04 09:53:52] 2025-06-04 13:53:26,748 | INFO     |  -- lfn=log.45006595._055090.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:53:52] 2025-06-04 13:53:26,748 | INFO     | stage-out finished correctly
[2025-06-04 09:53:52] 2025-06-04 13:53:27,667 | INFO     | monitor loop #266: job 0:6678392061 is in state 'finished'
[2025-06-04 09:53:52] 2025-06-04 13:53:27,667 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:53:52] 2025-06-04 13:53:29,757 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:53:52] 2025-06-04 13:53:30,170 | INFO     | monitor loop #267: job 0:6678392061 is in state 'finished'
[2025-06-04 09:53:52] 2025-06-04 13:53:30,170 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:53:52] 2025-06-04 13:53:31,004 | INFO     | job 6678392061 has state=finished
[2025-06-04 09:53:52] 2025-06-04 13:53:31,004 | INFO     | preparing for final server update for job 6678392061 in state='finished'
[2025-06-04 09:53:52] 2025-06-04 13:53:31,005 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:53:52] 2025-06-04 13:53:31,005 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:53:52] 2025-06-04 13:53:31,005 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:53:52] 2025-06-04 13:53:31,005 | INFO     | job 6678392061 has finished - writing final server update
[2025-06-04 09:53:52] 2025-06-04 13:53:31,006 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:53:52] 2025-06-04 13:53:31,025 | INFO     | executing command: lscpu
[2025-06-04 09:53:52] 2025-06-04 13:53:31,097 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:53:52] 2025-06-04 13:53:31,129 | INFO     | PID=3182866 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 09:53:52] 2025-06-04 13:53:31,129 | INFO     | .. there are 14 such processes running
[2025-06-04 09:53:52] 2025-06-04 13:53:32,673 | INFO     | monitor loop #268: job 0:6678392061 is in state 'finished'
[2025-06-04 09:53:52] 2025-06-04 13:53:32,673 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:53:52] 2025-06-04 13:53:33,381 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:53:52] 2025-06-04 13:53:33,381 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678392061/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:53:52] 2025-06-04 13:53:33,382 | INFO     | extracted standard info from prmon json
[2025-06-04 09:53:52] 2025-06-04 13:53:33,382 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:53:52] 2025-06-04 13:53:33,382 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:53:52] 2025-06-04 13:53:33,382 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:53:52] 2025-06-04 13:53:33,383 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:53:52] 2025-06-04 13:53:33,384 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:53:52] 2025-06-04 13:53:33,384 | INFO     | sum of square deviations: 41117050.0
[2025-06-04 09:53:52] 2025-06-04 13:53:33,384 | INFO     | sum of deviations: 2461188228.0000005
[2025-06-04 09:53:52] 2025-06-04 13:53:33,385 | INFO     | mean x: 1749043515.0
[2025-06-04 09:53:52] 2025-06-04 13:53:33,385 | INFO     | mean y: 2186136.901960784
[2025-06-04 09:53:52] 2025-06-04 13:53:33,385 | INFO     | -- intersect: -104692224317.58691
[2025-06-04 09:53:52] 2025-06-04 13:53:33,385 | INFO     | intersect: -104692224317.58691
[2025-06-04 09:53:52] 2025-06-04 13:53:33,385 | INFO     | chi2: 0.5271254976280753
[2025-06-04 09:53:52] 2025-06-04 13:53:33,385 | INFO     | -- intersect: -104692224317.58691
[2025-06-04 09:53:52] 2025-06-04 13:53:33,385 | INFO     | current memory leak: 59.86 B/s (using 51 data points, chi2=0.53)
[2025-06-04 09:53:52] 2025-06-04 13:53:33,386 | INFO     | ..............................
[2025-06-04 09:53:52] 2025-06-04 13:53:33,386 | INFO     | . Timing measurements:
[2025-06-04 09:53:52] 2025-06-04 13:53:33,386 | INFO     | . get job = 0 s
[2025-06-04 09:53:52] 2025-06-04 13:53:33,386 | INFO     | . initial setup = 2 s
[2025-06-04 09:53:52] 2025-06-04 13:53:33,386 | INFO     | . payload setup = 4 s
[2025-06-04 09:53:52] 2025-06-04 13:53:33,386 | INFO     | . stage-in = 0 s
[2025-06-04 09:53:52] 2025-06-04 13:53:33,386 | INFO     | . payload execution = 3519 s
[2025-06-04 09:53:52] 2025-06-04 13:53:33,386 | INFO     | . stage-out = 0 s
[2025-06-04 09:53:52] 2025-06-04 13:53:33,386 | INFO     | . log creation = 0 s
[2025-06-04 09:53:52] 2025-06-04 13:53:33,386 | INFO     | ..............................
[2025-06-04 09:53:52] 2025-06-04 13:53:33,480 | INFO     | 
[2025-06-04 09:53:52] 2025-06-04 13:53:33,480 | INFO     | job summary report
[2025-06-04 09:53:52] 2025-06-04 13:53:33,480 | INFO     | --------------------------------------------------
[2025-06-04 09:53:52] 2025-06-04 13:53:33,480 | INFO     | PanDA job id: 6678392061
[2025-06-04 09:53:52] 2025-06-04 13:53:33,480 | INFO     | task id: 45006595
[2025-06-04 09:53:52] 2025-06-04 13:53:33,480 | INFO     | errors: (none)
[2025-06-04 09:53:52] 2025-06-04 13:53:33,480 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:53:52] 2025-06-04 13:53:33,481 | INFO     | pilot state: finished 
[2025-06-04 09:53:52] 2025-06-04 13:53:33,481 | INFO     | transexitcode: 0
[2025-06-04 09:53:52] 2025-06-04 13:53:33,481 | INFO     | exeerrorcode: 0
[2025-06-04 09:53:52] 2025-06-04 13:53:33,481 | INFO     | exeerrordiag: 
[2025-06-04 09:53:52] 2025-06-04 13:53:33,481 | INFO     | exitcode: 0
[2025-06-04 09:53:52] 2025-06-04 13:53:33,481 | INFO     | exitmsg: OK
[2025-06-04 09:53:52] 2025-06-04 13:53:33,481 | INFO     | cpuconsumptiontime: 23298 s
[2025-06-04 09:53:52] 2025-06-04 13:53:33,481 | INFO     | nevents: 400
[2025-06-04 09:53:52] 2025-06-04 13:53:33,481 | INFO     | neventsw: 0
[2025-06-04 09:53:52] 2025-06-04 13:53:33,481 | INFO     | pid: 3189409
[2025-06-04 09:53:52] 2025-06-04 13:53:33,481 | INFO     | pgrp: 3189409
[2025-06-04 09:53:52] 2025-06-04 13:53:33,481 | INFO     | corecount: 8
[2025-06-04 09:53:52] 2025-06-04 13:53:33,481 | INFO     | event service: False
[2025-06-04 09:53:52] 2025-06-04 13:53:33,481 | INFO     | sizes: {0: 2397171, 1: 2397370, 3: 2397576, 11: 2397604, 3527: 2423227, 3529: 2432168, 3532: 2432352, 3536: 2432522}
[2025-06-04 09:53:52] 2025-06-04 13:53:33,481 | INFO     | --------------------------------------------------
[2025-06-04 09:53:52] 2025-06-04 13:53:33,482 | INFO     | 
[2025-06-04 09:53:52] 2025-06-04 13:53:33,482 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 09:53:52] 2025-06-04 13:53:33,496 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:53:52] 2025-06-04 13:53:33,496 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:53:52] 2025-06-04 13:53:33,496 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:53:52] 2025-06-04 13:53:33,496 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:53:52] 2025-06-04 13:53:33,496 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:53:52] 2025-06-04 13:53:33,496 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:53:52] 2025-06-04 13:53:33,496 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:53:52] 2025-06-04 13:53:33,496 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:53:52] 2025-06-04 13:53:33,496 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:53:52] 2025-06-04 13:53:33,496 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:53:52] 2025-06-04 13:53:33,497 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:53:52] 2025-06-04 13:53:33,497 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:53:52] 2025-06-04 13:53:33,497 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:53:52] 2025-06-04 13:53:33,497 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:53:52] 2025-06-04 13:53:33,497 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:53:52] 2025-06-04 13:53:33,497 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:53:52] 2025-06-04 13:53:33,497 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:53:52] 2025-06-04 13:53:33,497 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:53:52] 2025-06-04 13:53:33,497 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:53:52] 2025-06-04 13:53:33,497 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:53:52] 2025-06-04 13:53:33,497 | INFO     | job 6678392061 has completed (purged errors)
[2025-06-04 09:53:52] 2025-06-04 13:53:33,497 | INFO     | overall cleanup function is called
[2025-06-04 09:53:52] 2025-06-04 13:53:34,504 | INFO     | --- collectZombieJob: --- 10, [3189409]
[2025-06-04 09:53:52] 2025-06-04 13:53:34,504 | INFO     | zombie collector waiting for pid 3189409
[2025-06-04 09:53:52] 2025-06-04 13:53:34,504 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:53:52] 2025-06-04 13:53:34,504 | INFO     | collected zombie processes
[2025-06-04 09:53:52] 2025-06-04 13:53:34,504 | INFO     | will attempt to kill all subprocesses of pid=3189409
[2025-06-04 09:53:52] 2025-06-04 13:53:34,746 | INFO     | process IDs to be killed: [3189409] (in reverse order)
[2025-06-04 09:53:52] 2025-06-04 13:53:34,800 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:53:52] 2025-06-04 13:53:34,800 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:53:52] 2025-06-04 13:53:34,811 | INFO     | did not find any defunct processes belonging to 3189409
[2025-06-04 09:53:52] 2025-06-04 13:53:34,820 | INFO     | did not find any defunct processes belonging to 3189409
[2025-06-04 09:53:52] 2025-06-04 13:53:34,821 | INFO     | ready for new job
[2025-06-04 09:53:52] 2025-06-04 13:53:34,821 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:53:52] 2025-06-04 13:53:34,822 | INFO     | **************************************
[2025-06-04 09:53:52] 2025-06-04 13:53:34,822 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:53:52] 2025-06-04 13:53:34,822 | INFO     | **************************************
[2025-06-04 09:53:52] 2025-06-04 13:53:34,822 | INFO     | 
[2025-06-04 09:53:52] 2025-06-04 13:53:34,838 | INFO     | architecture information:
[2025-06-04 09:53:52] 2025-06-04 13:53:34,839 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:53:52] 2025-06-04 13:53:34,850 | INFO     | cat /etc/os-release:
[2025-06-04 09:53:52] NAME="CentOS Linux"
[2025-06-04 09:53:52] VERSION="7 (Core)"
[2025-06-04 09:53:52] ID="centos"
[2025-06-04 09:53:52] ID_LIKE="rhel fedora"
[2025-06-04 09:53:52] VERSION_ID="7"
[2025-06-04 09:53:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:53:52] ANSI_COLOR="0;31"
[2025-06-04 09:53:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:53:52] HOME_URL="https://www.centos.org/"
[2025-06-04 09:53:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:53:52] 
[2025-06-04 09:53:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:53:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:53:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:53:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:53:52] 
[2025-06-04 09:53:52] 2025-06-04 13:53:34,850 | INFO     | **************************************
[2025-06-04 09:53:52] 2025-06-04 13:53:35,353 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 09:53:52] 2025-06-04 13:53:35,364 | INFO     | sufficient remaining disk space (75340185600 B)
[2025-06-04 09:53:52] 2025-06-04 13:53:35,364 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:53:52] 2025-06-04 13:53:35,365 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:53:52] 2025-06-04 13:53:35,365 | INFO     | update_server=False
[2025-06-04 09:53:52] 2025-06-04 13:53:35,365 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:53:52] 2025-06-04 13:53:35,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:53:52] 2025-06-04 13:53:35,365 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:53:52] 2025-06-04 13:53:35,365 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:53:52] 2025-06-04 13:53:35,366 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:53:52] 2025-06-04 13:53:35,366 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:53:52] 2025-06-04 13:53:35,366 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:53:52] 2025-06-04 13:53:35,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:53:52] 2025-06-04 13:53:35,877 | INFO     | all payload control threads have been joined
[2025-06-04 09:53:52] 2025-06-04 13:53:36,181 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:53:52] 2025-06-04 13:53:36,181 | INFO     | aborting loop
[2025-06-04 09:53:52] 2025-06-04 13:53:36,270 | INFO     | all data control threads have been joined
[2025-06-04 09:53:52] 2025-06-04 13:53:36,366 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:53:52] 2025-06-04 13:53:36,371 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:53:52] 2025-06-04 13:53:36,630 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:53:52] 2025-06-04 13:53:36,698 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:53:52] 2025-06-04 13:53:36,882 | INFO     | [payload] control thread has finished
[2025-06-04 09:53:52] 2025-06-04 13:53:36,975 | INFO     | all job control threads have been joined
[2025-06-04 09:53:52] 2025-06-04 13:53:37,167 | INFO     | [job] validate thread has finished
[2025-06-04 09:53:52] 2025-06-04 13:53:37,185 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:53:52] 2025-06-04 13:53:37,272 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:53:52] 2025-06-04 13:53:37,275 | INFO     | [data] control thread has finished
[2025-06-04 09:53:52] 2025-06-04 13:53:37,371 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:53:52] 2025-06-04 13:53:37,424 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:53:52] 2025-06-04 13:53:37,442 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:53:52] 2025-06-04 13:53:37,469 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:53:52] 2025-06-04 13:53:37,976 | INFO     | [job] control thread has finished
[2025-06-04 09:53:52] 2025-06-04 13:53:39,854 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:53:52] 2025-06-04 13:53:46,136 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:53:52] 2025-06-04 13:53:47,141 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:53:52] 2025-06-04 13:53:47,543 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140436634969920)>', '<ExcThread(monitor, started 140436127590144)>']
[2025-06-04 09:53:52] 2025-06-04 13:53:48,430 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:53:52] 2025-06-04 13:53:48,431 | INFO     | [monitor] control thread has ended
[2025-06-04 09:53:52] 2025-06-04 13:53:52,569 | INFO     | all workflow threads have been joined
[2025-06-04 09:53:52] 2025-06-04 13:53:52,569 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:53:52] 2025-06-04 13:53:52,569 | INFO     | traces error code: 0
[2025-06-04 09:53:52] 2025-06-04 13:53:52,569 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:53:52] 2025-06-04 13:53:52,718 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:53:52] 2025-06-04 13:53:52,720 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:53:52] 2025-06-04 13:53:52,722 [wrapper] pilotpid: 3182866
[2025-06-04 09:53:52] 2025-06-04 13:53:52,723 [wrapper] Pilot exit status: 0
[2025-06-04 09:53:52] 2025-06-04 13:53:52,730 [wrapper] pandaids: 6678392061
[2025-06-04 09:53:52] 2025-06-04 13:53:52,770 [wrapper] cleanup supervisor_pilot 3311336 3182867
[2025-06-04 09:53:52] 2025-06-04 13:53:52,772 [wrapper] Test setup, not cleaning
[2025-06-04 09:53:52] 2025-06-04 13:53:52,774 [wrapper] apfmon messages muted
[2025-06-04 09:53:52] 2025-06-04 13:53:52,775 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:53:52] 2025-06-04 13:53:52,777 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:53:52]  *** Error codes and diagnostics ***
[2025-06-04 09:53:52]     "exeErrorCode": 0,
[2025-06-04 09:53:52]     "exeErrorDiag": "",
[2025-06-04 09:53:52]     "pilotErrorCode": 0,
[2025-06-04 09:53:52]     "pilotErrorDiag": "",
[2025-06-04 09:53:52]  *** Listing of results directory ***
[2025-06-04 09:53:52] total 389080
[2025-06-04 09:53:52] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 09:53:52] -rwx------ 1 boincer umatlas     37140 Jun  4 03:38 runpilot2-wrapper.sh
[2025-06-04 09:53:52] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:38 queuedata.json
[2025-06-04 09:53:52] -rw-r--r-- 1 boincer umatlas       100 Jun  4 08:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:53:52] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 08:54 run_atlas
[2025-06-04 09:53:52] -rw-r--r-- 1 boincer umatlas       105 Jun  4 08:54 job.xml
[2025-06-04 09:53:52] -rw-r--r-- 2 boincer umatlas 214627801 Jun  4 08:54 EVNT.45006593._002204.pool.root.1
[2025-06-04 09:53:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:54 start_atlas.sh
[2025-06-04 09:53:52] drwxrwx--x 2 boincer umatlas      4096 Jun  4 08:54 shared
[2025-06-04 09:53:52] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 08:54 input.tar.gz
[2025-06-04 09:53:52] -rw-r--r-- 1 boincer umatlas         0 Jun  4 08:54 boinc_lockfile
[2025-06-04 09:53:52] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 08:54 pandaJob.out
[2025-06-04 09:53:52] -rw------- 1 boincer umatlas    986811 Jun  4 08:54 agis_schedconf.cvmfs.json
[2025-06-04 09:53:52] -rw------- 1 boincer umatlas   1598969 Jun  4 08:54 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:53:52] drwx------ 4 boincer umatlas      4096 Jun  4 08:54 pilot3
[2025-06-04 09:53:52] -rw-r--r-- 1 boincer umatlas      6856 Jun  4 09:48 init_data.xml
[2025-06-04 09:53:52] -rw------- 1 boincer umatlas 178646810 Jun  4 09:52 HITS.45006595._055090.pool.root.1
[2025-06-04 09:53:52] -rw-r--r-- 1 boincer umatlas       529 Jun  4 09:53 boinc_task_state.xml
[2025-06-04 09:53:52] -rw------- 1 boincer umatlas      1029 Jun  4 09:53 memory_monitor_summary.json
[2025-06-04 09:53:52] -rw------- 1 boincer umatlas    296670 Jun  4 09:53 log.45006595._055090.job.log.tgz.1
[2025-06-04 09:53:52] -rw------- 1 boincer umatlas      7710 Jun  4 09:53 heartbeat.json
[2025-06-04 09:53:52] -rw------- 1 boincer umatlas        95 Jun  4 09:53 pilot_heartbeat.json
[2025-06-04 09:53:52] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 09:53 boinc_mmap_file
[2025-06-04 09:53:52] -rw-r--r-- 1 boincer umatlas        27 Jun  4 09:53 wrapper_checkpoint.txt
[2025-06-04 09:53:52] -rw------- 1 boincer umatlas      4548 Jun  4 09:53 pilotlog.txt
[2025-06-04 09:53:52] -rw------- 1 boincer umatlas    360748 Jun  4 09:53 log.45006595._055090.job.log.1
[2025-06-04 09:53:52] -rw------- 1 boincer umatlas       357 Jun  4 09:53 output.list
[2025-06-04 09:53:52] -rw-r--r-- 1 boincer umatlas       620 Jun  4 09:53 runtime_log
[2025-06-04 09:53:52] -rw------- 1 boincer umatlas    675840 Jun  4 09:53 result.tar.gz
[2025-06-04 09:53:52] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 09:53 runtime_log.err
[2025-06-04 09:53:52] -rw------- 1 boincer umatlas       650 Jun  4 09:53 linKDmRsxg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmdwaKDmMUroAo.diag
[2025-06-04 09:53:52] -rw-r--r-- 1 boincer umatlas     21585 Jun  4 09:53 stderr.txt
[2025-06-04 09:53:52] HITS file was successfully produced:
[2025-06-04 09:53:52] -rw------- 1 boincer umatlas 178646810 Jun  4 09:52 shared/HITS.pool.root.1
[2025-06-04 09:53:52]  *** Contents of shared directory: ***
[2025-06-04 09:53:52] total 385240
[2025-06-04 09:53:52] -rw-r--r-- 2 boincer umatlas 214627801 Jun  4 08:54 ATLAS.root_0
[2025-06-04 09:53:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:54 start_atlas.sh
[2025-06-04 09:53:52] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 08:54 input.tar.gz
[2025-06-04 09:53:52] -rw------- 1 boincer umatlas 178646810 Jun  4 09:52 HITS.pool.root.1
[2025-06-04 09:53:52] -rw------- 1 boincer umatlas    675840 Jun  4 09:53 result.tar.gz
09:53:54 (3178981): run_atlas exited; CPU time 23425.017199
09:53:54 (3178981): called boinc_finish(0)

</stderr_txt>
]]>

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