Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:15:14 (41082): wrapper (7.7.26015): starting
08:15:14 (41082): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:15:14] Arguments: --nthreads 8
[2025-06-04 08:15:14] Threads: 8
[2025-06-04 08:15:14] Checking for CVMFS
[2025-06-04 08:15:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:15:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:15:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:15:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:15:14] 2.12.6.0 1636016 23475 460556 146779 3 386 26747768 32935937 16144 16776704 1 130589351 99.629 116904141 26392 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:15:14] CVMFS is ok
[2025-06-04 08:15:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:15:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:15:14] Further information can be found at the LHC@home message board.
[2025-06-04 08:15:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:15:14] Checking for apptainer binary...
[2025-06-04 08:15:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:15:14] Running /usr/bin/apptainer --version
[2025-06-04 08:15:14] apptainer version 1.4.1-1.el9
[2025-06-04 08:15:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:15:14] c6-2-11-4.aglt2.org
[2025-06-04 08:15:14] apptainer works
[2025-06-04 08:15:15] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:15:15] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:15:15] Starting ATLAS job with PandaID=6678391478
[2025-06-04 08:15:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:29:52]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:29:52]  is_tar=False
[2025-06-04 09:29:52]  lfn=log.45006595._054840.job.log.tgz.1
[2025-06-04 09:29:52]  mtime=0
[2025-06-04 09:29:52]  protocol_id=None
[2025-06-04 09:29:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:29:52]  replicas=None
[2025-06-04 09:29:52]  scope=mc23_13p6TeV
[2025-06-04 09:29:52]  status=None
[2025-06-04 09:29:52]  status_code=0
[2025-06-04 09:29:52]  storage_token=
[2025-06-04 09:29:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678391478/log.45006595._054840.job.log.tgz.1
[2025-06-04 09:29:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/c1/log.45006595._054840.job.log.tgz.1
[2025-06-04 09:29:52]  workdir=None
[2025-06-04 09:29:52] ]
[2025-06-04 09:29:52] 2025-06-04 13:29:24,652 | INFO     | transferring file log.45006595._054840.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678391478/log.45006595._054840.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:29:52] 2025-06-04 13:29:24,653 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678391478/log.45006595._054840.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._054840.job
[2025-06-04 09:29:52] 2025-06-04 13:29:24,673 | INFO     | adding to output.list: log.45006595._054840.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/c1/log.45006595._054840.job.log.tg
[2025-06-04 09:29:52] 2025-06-04 13:29:24,673 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:29:52] 2025-06-04 13:29:24,674 | INFO     | summary of transferred files:
[2025-06-04 09:29:52] 2025-06-04 13:29:24,674 | INFO     |  -- lfn=log.45006595._054840.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:29:52] 2025-06-04 13:29:24,674 | INFO     | stage-out finished correctly
[2025-06-04 09:29:52] 2025-06-04 13:29:24,882 | WARNING  | process 51756 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:29:52] 2025-06-04 13:29:24,882 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678391478/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:29:52] 2025-06-04 13:29:25,216 | INFO     | number of running child processes to parent process 51756: 1
[2025-06-04 09:29:52] 2025-06-04 13:29:25,217 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:29:52] 2025-06-04 13:29:26,632 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:29:52] 2025-06-04 13:29:27,720 | INFO     | monitor loop #327: job 0:6678391478 is in state 'finished'
[2025-06-04 09:29:52] 2025-06-04 13:29:27,720 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:29:52] 2025-06-04 13:29:28,806 | INFO     | job 6678391478 has state=finished
[2025-06-04 09:29:52] 2025-06-04 13:29:28,807 | INFO     | preparing for final server update for job 6678391478 in state='finished'
[2025-06-04 09:29:52] 2025-06-04 13:29:28,808 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:29:52] 2025-06-04 13:29:28,808 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:29:52] 2025-06-04 13:29:28,808 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:29:52] 2025-06-04 13:29:28,808 | INFO     | job 6678391478 has finished - writing final server update
[2025-06-04 09:29:52] 2025-06-04 13:29:28,809 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:29:52] 2025-06-04 13:29:28,826 | INFO     | executing command: lscpu
[2025-06-04 09:29:52] 2025-06-04 13:29:28,904 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:29:52] 2025-06-04 13:29:30,223 | INFO     | monitor loop #328: job 0:6678391478 is in state 'finished'
[2025-06-04 09:29:52] 2025-06-04 13:29:30,223 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:29:52] 2025-06-04 13:29:32,299 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:29:52] 2025-06-04 13:29:32,299 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678391478/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:29:52] 2025-06-04 13:29:32,300 | INFO     | extracted standard info from prmon json
[2025-06-04 09:29:52] 2025-06-04 13:29:32,300 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:29:52] 2025-06-04 13:29:32,300 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:29:52] 2025-06-04 13:29:32,301 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:29:52] 2025-06-04 13:29:32,301 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:29:52] 2025-06-04 13:29:32,303 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:29:52] 2025-06-04 13:29:32,303 | INFO     | sum of square deviations: 89127252.5
[2025-06-04 09:29:52] 2025-06-04 13:29:32,303 | INFO     | sum of deviations: 10128546536.500002
[2025-06-04 09:29:52] 2025-06-04 13:29:32,303 | INFO     | mean x: 1749041635.5
[2025-06-04 09:29:52] 2025-06-04 13:29:32,303 | INFO     | mean y: 2159645.015151515
[2025-06-04 09:29:52] 2025-06-04 13:29:32,303 | INFO     | -- intersect: -198761395861.62213
[2025-06-04 09:29:52] 2025-06-04 13:29:32,304 | INFO     | intersect: -198761395861.62213
[2025-06-04 09:29:52] 2025-06-04 13:29:32,304 | INFO     | chi2: 1.1330249658325762
[2025-06-04 09:29:52] 2025-06-04 13:29:32,304 | INFO     | -- intersect: -198761395861.62213
[2025-06-04 09:29:52] 2025-06-04 13:29:32,304 | INFO     | current memory leak: 113.64 B/s (using 66 data points, chi2=1.13)
[2025-06-04 09:29:52] 2025-06-04 13:29:32,304 | INFO     | ..............................
[2025-06-04 09:29:52] 2025-06-04 13:29:32,305 | INFO     | . Timing measurements:
[2025-06-04 09:29:52] 2025-06-04 13:29:32,305 | INFO     | . get job = 0 s
[2025-06-04 09:29:52] 2025-06-04 13:29:32,305 | INFO     | . initial setup = 2 s
[2025-06-04 09:29:52] 2025-06-04 13:29:32,305 | INFO     | . payload setup = 5 s
[2025-06-04 09:29:52] 2025-06-04 13:29:32,305 | INFO     | . stage-in = 0 s
[2025-06-04 09:29:52] 2025-06-04 13:29:32,305 | INFO     | . payload execution = 4415 s
[2025-06-04 09:29:52] 2025-06-04 13:29:32,305 | INFO     | . stage-out = 1 s
[2025-06-04 09:29:52] 2025-06-04 13:29:32,305 | INFO     | . log creation = 0 s
[2025-06-04 09:29:52] 2025-06-04 13:29:32,305 | INFO     | ..............................
[2025-06-04 09:29:52] 2025-06-04 13:29:32,403 | INFO     | 
[2025-06-04 09:29:52] 2025-06-04 13:29:32,404 | INFO     | job summary report
[2025-06-04 09:29:52] 2025-06-04 13:29:32,404 | INFO     | --------------------------------------------------
[2025-06-04 09:29:52] 2025-06-04 13:29:32,404 | INFO     | PanDA job id: 6678391478
[2025-06-04 09:29:52] 2025-06-04 13:29:32,404 | INFO     | task id: 45006595
[2025-06-04 09:29:52] 2025-06-04 13:29:32,404 | INFO     | errors: (none)
[2025-06-04 09:29:52] 2025-06-04 13:29:32,404 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:29:52] 2025-06-04 13:29:32,404 | INFO     | pilot state: finished 
[2025-06-04 09:29:52] 2025-06-04 13:29:32,404 | INFO     | transexitcode: 0
[2025-06-04 09:29:52] 2025-06-04 13:29:32,404 | INFO     | exeerrorcode: 0
[2025-06-04 09:29:52] 2025-06-04 13:29:32,404 | INFO     | exeerrordiag: 
[2025-06-04 09:29:52] 2025-06-04 13:29:32,405 | INFO     | exitcode: 0
[2025-06-04 09:29:52] 2025-06-04 13:29:32,405 | INFO     | exitmsg: OK
[2025-06-04 09:29:52] 2025-06-04 13:29:32,405 | INFO     | cpuconsumptiontime: 29523 s
[2025-06-04 09:29:52] 2025-06-04 13:29:32,405 | INFO     | nevents: 400
[2025-06-04 09:29:52] 2025-06-04 13:29:32,405 | INFO     | neventsw: 0
[2025-06-04 09:29:52] 2025-06-04 13:29:32,405 | INFO     | pid: 51756
[2025-06-04 09:29:52] 2025-06-04 13:29:32,405 | INFO     | pgrp: 51756
[2025-06-04 09:29:52] 2025-06-04 13:29:32,405 | INFO     | corecount: 8
[2025-06-04 09:29:52] 2025-06-04 13:29:32,405 | INFO     | event service: False
[2025-06-04 09:29:52] 2025-06-04 13:29:32,405 | INFO     | sizes: {0: 2397341, 1: 2397341, 4: 2397575, 11: 2397603, 4423: 2423634, 4424: 2423633, 4425: 2432758, 4427: 2432814, 4433: 2432984}
[2025-06-04 09:29:52] 2025-06-04 13:29:32,405 | INFO     | --------------------------------------------------
[2025-06-04 09:29:52] 2025-06-04 13:29:32,405 | INFO     | 
[2025-06-04 09:29:52] 2025-06-04 13:29:32,405 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 09:29:52] 2025-06-04 13:29:32,422 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:29:52] 2025-06-04 13:29:32,423 | INFO     | job 6678391478 has completed (purged errors)
[2025-06-04 09:29:52] 2025-06-04 13:29:32,424 | INFO     | overall cleanup function is called
[2025-06-04 09:29:52] 2025-06-04 13:29:33,431 | INFO     | --- collectZombieJob: --- 10, [51756]
[2025-06-04 09:29:52] 2025-06-04 13:29:33,431 | INFO     | zombie collector waiting for pid 51756
[2025-06-04 09:29:52] 2025-06-04 13:29:33,431 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:29:52] 2025-06-04 13:29:33,431 | INFO     | collected zombie processes
[2025-06-04 09:29:52] 2025-06-04 13:29:33,431 | INFO     | will attempt to kill all subprocesses of pid=51756
[2025-06-04 09:29:52] 2025-06-04 13:29:33,767 | INFO     | process IDs to be killed: [51756] (in reverse order)
[2025-06-04 09:29:52] 2025-06-04 13:29:33,874 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:29:52] 2025-06-04 13:29:33,875 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:29:52] 2025-06-04 13:29:33,889 | INFO     | did not find any defunct processes belonging to 51756
[2025-06-04 09:29:52] 2025-06-04 13:29:33,903 | INFO     | did not find any defunct processes belonging to 51756
[2025-06-04 09:29:52] 2025-06-04 13:29:33,903 | INFO     | ready for new job
[2025-06-04 09:29:52] 2025-06-04 13:29:33,903 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:29:52] 2025-06-04 13:29:33,905 | INFO     | **************************************
[2025-06-04 09:29:52] 2025-06-04 13:29:33,905 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:29:52] 2025-06-04 13:29:33,905 | INFO     | **************************************
[2025-06-04 09:29:52] 2025-06-04 13:29:33,905 | INFO     | 
[2025-06-04 09:29:52] 2025-06-04 13:29:33,923 | INFO     | architecture information:
[2025-06-04 09:29:52] 2025-06-04 13:29:33,923 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:29:52] 2025-06-04 13:29:33,938 | INFO     | cat /etc/os-release:
[2025-06-04 09:29:52] NAME="CentOS Linux"
[2025-06-04 09:29:52] VERSION="7 (Core)"
[2025-06-04 09:29:52] ID="centos"
[2025-06-04 09:29:52] ID_LIKE="rhel fedora"
[2025-06-04 09:29:52] VERSION_ID="7"
[2025-06-04 09:29:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:29:52] ANSI_COLOR="0;31"
[2025-06-04 09:29:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:29:52] HOME_URL="https://www.centos.org/"
[2025-06-04 09:29:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:29:52] 
[2025-06-04 09:29:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:29:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:29:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:29:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:29:52] 
[2025-06-04 09:29:52] 2025-06-04 13:29:33,938 | INFO     | **************************************
[2025-06-04 09:29:52] 2025-06-04 13:29:34,441 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 09:29:52] 2025-06-04 13:29:34,457 | INFO     | sufficient remaining disk space (95531565056 B)
[2025-06-04 09:29:52] 2025-06-04 13:29:34,457 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:29:52] 2025-06-04 13:29:34,457 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:29:52] 2025-06-04 13:29:34,457 | INFO     | update_server=False
[2025-06-04 09:29:52] 2025-06-04 13:29:34,457 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:29:52] 2025-06-04 13:29:34,458 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:29:52] 2025-06-04 13:29:34,458 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:29:52] 2025-06-04 13:29:34,458 | INFO     | aborting loop
[2025-06-04 09:29:52] 2025-06-04 13:29:34,458 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:29:52] 2025-06-04 13:29:34,458 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:29:52] 2025-06-04 13:29:34,458 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:29:52] 2025-06-04 13:29:34,880 | INFO     | all job control threads have been joined
[2025-06-04 09:29:52] 2025-06-04 13:29:35,080 | INFO     | all data control threads have been joined
[2025-06-04 09:29:52] 2025-06-04 13:29:35,278 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:29:52] 2025-06-04 13:29:35,461 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:29:52] 2025-06-04 13:29:35,462 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:29:52] 2025-06-04 13:29:35,642 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:29:52] 2025-06-04 13:29:35,776 | INFO     | all payload control threads have been joined
[2025-06-04 09:29:52] 2025-06-04 13:29:35,885 | INFO     | [job] control thread has finished
[2025-06-04 09:29:52] 2025-06-04 13:29:35,920 | INFO     | [job] validate thread has finished
[2025-06-04 09:29:52] 2025-06-04 13:29:36,086 | INFO     | [data] control thread has finished
[2025-06-04 09:29:52] 2025-06-04 13:29:36,282 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:29:52] 2025-06-04 13:29:36,355 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:29:52] 2025-06-04 13:29:36,378 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:29:52] 2025-06-04 13:29:36,437 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:29:52] 2025-06-04 13:29:36,628 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:29:52] 2025-06-04 13:29:36,781 | INFO     | [payload] control thread has finished
[2025-06-04 09:29:52] 2025-06-04 13:29:37,196 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:29:52] 2025-06-04 13:29:37,283 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:29:52] 2025-06-04 13:29:37,411 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:29:52] 2025-06-04 13:29:38,416 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:29:52] 2025-06-04 13:29:41,202 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:29:52] 2025-06-04 13:29:45,115 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:29:52] 2025-06-04 13:29:46,120 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:29:52] 2025-06-04 13:29:46,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140687235536704)>', '<ExcThread(monitor, started 140686594656000)>']
[2025-06-04 09:29:52] 2025-06-04 13:29:47,522 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:29:52] 2025-06-04 13:29:47,522 | INFO     | [monitor] control thread has ended
[2025-06-04 09:29:52] 2025-06-04 13:29:52,000 | INFO     | all workflow threads have been joined
[2025-06-04 09:29:52] 2025-06-04 13:29:52,001 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:29:52] 2025-06-04 13:29:52,001 | INFO     | traces error code: 0
[2025-06-04 09:29:52] 2025-06-04 13:29:52,001 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:29:52] 2025-06-04 13:29:52,197 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:29:52] 2025-06-04 13:29:52,200 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:29:52] 2025-06-04 13:29:52,203 [wrapper] pilotpid: 45186
[2025-06-04 09:29:52] 2025-06-04 13:29:52,205 [wrapper] Pilot exit status: 0
[2025-06-04 09:29:52] 2025-06-04 13:29:52,214 [wrapper] pandaids: 6678391478
[2025-06-04 09:29:52] 2025-06-04 13:29:52,285 [wrapper] cleanup supervisor_pilot  307813 45187
[2025-06-04 09:29:52] 2025-06-04 13:29:52,288 [wrapper] Test setup, not cleaning
[2025-06-04 09:29:52] 2025-06-04 13:29:52,290 [wrapper] apfmon messages muted
[2025-06-04 09:29:52] 2025-06-04 13:29:52,293 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:29:52] 2025-06-04 13:29:52,295 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:29:52]  *** Error codes and diagnostics ***
[2025-06-04 09:29:52]     "exeErrorCode": 0,
[2025-06-04 09:29:52]     "exeErrorDiag": "",
[2025-06-04 09:29:52]     "pilotErrorCode": 0,
[2025-06-04 09:29:52]     "pilotErrorDiag": "",
[2025-06-04 09:29:52]  *** Listing of results directory ***
[2025-06-04 09:29:52] total 392352
[2025-06-04 09:29:52] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:04 pilot3.tar.gz
[2025-06-04 09:29:52] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:29 queuedata.json
[2025-06-04 09:29:52] -rwx------. 1 boincer umatlas     37140 Jun  4 03:31 runpilot2-wrapper.sh
[2025-06-04 09:29:52] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:29:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:15 run_atlas
[2025-06-04 09:29:52] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:15 job.xml
[2025-06-04 09:29:52] -rw-r--r--. 2 boincer umatlas 217632793 Jun  4 08:15 EVNT.45006593._002194.pool.root.1
[2025-06-04 09:29:52] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:15 start_atlas.sh
[2025-06-04 09:29:52] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:15 shared
[2025-06-04 09:29:52] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 08:15 input.tar.gz
[2025-06-04 09:29:52] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:15 boinc_lockfile
[2025-06-04 09:29:52] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 08:15 pandaJob.out
[2025-06-04 09:29:52] -rw-------. 1 boincer umatlas    986812 Jun  4 08:15 agis_schedconf.cvmfs.json
[2025-06-04 09:29:52] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:15 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:29:52] drwx------. 4 boincer umatlas      4096 Jun  4 08:15 pilot3
[2025-06-04 09:29:52] -rw-------. 1 boincer umatlas 178806847 Jun  4 09:28 HITS.45006595._054840.pool.root.1
[2025-06-04 09:29:52] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:29 boinc_task_state.xml
[2025-06-04 09:29:52] -rw-------. 1 boincer umatlas        95 Jun  4 09:29 pilot_heartbeat.json
[2025-06-04 09:29:52] -rw-------. 1 boincer umatlas      1045 Jun  4 09:29 memory_monitor_summary.json
[2025-06-04 09:29:52] -rw-r--r--. 1 boincer umatlas      6857 Jun  4 09:29 init_data.xml
[2025-06-04 09:29:52] -rw-------. 1 boincer umatlas    307738 Jun  4 09:29 log.45006595._054840.job.log.tgz.1
[2025-06-04 09:29:52] -rw-------. 1 boincer umatlas      7726 Jun  4 09:29 heartbeat.json
[2025-06-04 09:29:52] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:29 wrapper_checkpoint.txt
[2025-06-04 09:29:52] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:29 boinc_mmap_file
[2025-06-04 09:29:52] -rw-------. 1 boincer umatlas      4548 Jun  4 09:29 pilotlog.txt
[2025-06-04 09:29:52] -rw-------. 1 boincer umatlas    437340 Jun  4 09:29 log.45006595._054840.job.log.1
[2025-06-04 09:29:52] -rw-------. 1 boincer umatlas       357 Jun  4 09:29 output.list
[2025-06-04 09:29:52] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:29 runtime_log
[2025-06-04 09:29:52] -rw-------. 1 boincer umatlas    768000 Jun  4 09:29 result.tar.gz
[2025-06-04 09:29:52] -rw-r--r--. 1 boincer umatlas      8664 Jun  4 09:29 runtime_log.err
[2025-06-04 09:29:52] -rw-------. 1 boincer umatlas       652 Jun  4 09:29 MVVLDmFmxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUdnKDmAsCVwm.diag
[2025-06-04 09:29:52] -rw-r--r--. 1 boincer umatlas     21517 Jun  4 09:29 stderr.txt
[2025-06-04 09:29:52] HITS file was successfully produced:
[2025-06-04 09:29:52] -rw-------. 1 boincer umatlas 178806847 Jun  4 09:28 shared/HITS.pool.root.1
[2025-06-04 09:29:52]  *** Contents of shared directory: ***
[2025-06-04 09:29:52] total 388428
[2025-06-04 09:29:52] -rw-r--r--. 2 boincer umatlas 217632793 Jun  4 08:15 ATLAS.root_0
[2025-06-04 09:29:52] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:15 start_atlas.sh
[2025-06-04 09:29:52] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 08:15 input.tar.gz
[2025-06-04 09:29:52] -rw-------. 1 boincer umatlas 178806847 Jun  4 09:28 HITS.pool.root.1
[2025-06-04 09:29:52] -rw-------. 1 boincer umatlas    768000 Jun  4 09:29 result.tar.gz
09:29:54 (41082): run_atlas exited; CPU time 29706.108325
09:29:54 (41082): called boinc_finish(0)

</stderr_txt>
]]>

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