Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
00:07:35 (3114567): wrapper (7.7.26015): starting
00:07:35 (3114567): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 00:07:35] Arguments: --nthreads 3
[2025-06-05 00:07:35] Threads: 3
[2025-06-05 00:07:35] Checking for CVMFS
[2025-06-05 00:07:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:07:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:07:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:07:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:07:35] 2.9.2.0 2199589 3023 68532 146795 0 56 30578421 36864000 0 130560 0 2473258 99.991 754834 46554 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-05 00:07:35] CVMFS is ok
[2025-06-05 00:07:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:07:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 00:07:35] Further information can be found at the LHC@home message board.
[2025-06-05 00:07:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:07:35] Checking for apptainer binary...
[2025-06-05 00:07:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 00:07:35] Running /usr/bin/apptainer --version
[2025-06-05 00:07:35] apptainer version 1.3.6-6.1
[2025-06-05 00:07:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:07:36] cosA133a
[2025-06-05 00:07:36] apptainer works
[2025-06-05 00:07:36] Set ATHENA_PROC_NUMBER=3
[2025-06-05 00:07:36] Set ATHENA_CORE_NUMBER=3
[2025-06-05 00:07:36] Starting ATLAS job with PandaID=6678391552
[2025-06-05 00:07:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:28:36]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:28:36]  is_tar=False
[2025-06-05 01:28:36]  lfn=log.45006595._054914.job.log.tgz.1
[2025-06-05 01:28:36]  mtime=0
[2025-06-05 01:28:36]  protocol_id=None
[2025-06-05 01:28:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 01:28:36]  replicas=None
[2025-06-05 01:28:36]  scope=mc23_13p6TeV
[2025-06-05 01:28:36]  status=None
[2025-06-05 01:28:36]  status_code=0
[2025-06-05 01:28:36]  storage_token=
[2025-06-05 01:28:36]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678391552/log.45006595._054914.job.log.tgz.1
[2025-06-05 01:28:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/0b/log.45006595._054914.job.log.tgz.1
[2025-06-05 01:28:36]  workdir=None
[2025-06-05 01:28:36] ]
[2025-06-05 01:28:36] 2025-06-04 23:28:06,481 | INFO     | transferring file log.45006595._054914.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678391552/log.45006595._054914.job.log.tgz.1 to /local/data/boinc/
[2025-06-05 01:28:36] 2025-06-04 23:28:06,481 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678391552/log.45006595._054914.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0549
[2025-06-05 01:28:36] 2025-06-04 23:28:06,494 | INFO     | adding to output.list: log.45006595._054914.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/0b/log.45006595._054914.job.log.tg
[2025-06-05 01:28:36] 2025-06-04 23:28:06,494 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 01:28:36] 2025-06-04 23:28:06,494 | INFO     | summary of transferred files:
[2025-06-05 01:28:36] 2025-06-04 23:28:06,494 | INFO     |  -- lfn=log.45006595._054914.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 01:28:36] 2025-06-04 23:28:06,494 | INFO     | stage-out finished correctly
[2025-06-05 01:28:36] 2025-06-04 23:28:08,560 | INFO     | monitor loop #372: job 0:6678391552 is in state 'finished'
[2025-06-05 01:28:36] 2025-06-04 23:28:08,560 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:28:36] 2025-06-04 23:28:09,184 | INFO     | 4824s have passed since pilot start - server update state is 'RUNNING'
[2025-06-05 01:28:36] 2025-06-04 23:28:09,943 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 01:28:36] 2025-06-04 23:28:10,016 | INFO     | job 6678391552 has state=finished
[2025-06-05 01:28:36] 2025-06-04 23:28:10,016 | INFO     | preparing for final server update for job 6678391552 in state='finished'
[2025-06-05 01:28:36] 2025-06-04 23:28:10,016 | INFO     | this job has now completed (state=finished)
[2025-06-05 01:28:36] 2025-06-04 23:28:10,016 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 01:28:36] 2025-06-04 23:28:10,016 | INFO     | log transfer has been attempted: DONE
[2025-06-05 01:28:36] 2025-06-04 23:28:10,016 | INFO     | job 6678391552 has finished - writing final server update
[2025-06-05 01:28:36] 2025-06-04 23:28:10,016 | INFO     | total number of processed events: 400 (read)
[2025-06-05 01:28:36] 2025-06-04 23:28:10,017 | INFO     | executing command: lscpu
[2025-06-05 01:28:36] 2025-06-04 23:28:10,031 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 01:28:36] 2025-06-04 23:28:11,063 | INFO     | monitor loop #373: job 0:6678391552 is in state 'finished'
[2025-06-05 01:28:36] 2025-06-04 23:28:11,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:28:36] 2025-06-04 23:28:13,567 | INFO     | monitor loop #374: job 0:6678391552 is in state 'finished'
[2025-06-05 01:28:36] 2025-06-04 23:28:13,567 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:28:36] 2025-06-04 23:28:16,070 | INFO     | monitor loop #375: job 0:6678391552 is in state 'finished'
[2025-06-05 01:28:36] 2025-06-04 23:28:16,070 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:28:36] 2025-06-04 23:28:18,061 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 01:28:36] 2025-06-04 23:28:18,061 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678391552/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:28:36] 2025-06-04 23:28:18,061 | INFO     | extracted standard info from prmon json
[2025-06-05 01:28:36] 2025-06-04 23:28:18,061 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:28:36] 2025-06-04 23:28:18,061 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:28:36] 2025-06-04 23:28:18,062 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:28:36] 2025-06-04 23:28:18,062 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:28:36] 2025-06-04 23:28:18,062 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:28:36] 2025-06-04 23:28:18,062 | INFO     | sum of square deviations: 115715658.0
[2025-06-05 01:28:36] 2025-06-04 23:28:18,063 | INFO     | sum of deviations: 841986080.5
[2025-06-05 01:28:36] 2025-06-04 23:28:18,063 | INFO     | mean x: 1749077360.5
[2025-06-05 01:28:36] 2025-06-04 23:28:18,063 | INFO     | mean y: 2357226.125
[2025-06-05 01:28:36] 2025-06-04 23:28:18,063 | INFO     | -- intersect: -12724518433.681389
[2025-06-05 01:28:36] 2025-06-04 23:28:18,063 | INFO     | intersect: -12724518433.681389
[2025-06-05 01:28:36] 2025-06-04 23:28:18,063 | INFO     | chi2: 0.0035575168180291684
[2025-06-05 01:28:36] 2025-06-04 23:28:18,063 | INFO     | -- intersect: -12724518433.681389
[2025-06-05 01:28:36] 2025-06-04 23:28:18,063 | INFO     | current memory leak: 7.28 B/s (using 72 data points, chi2=0.00)
[2025-06-05 01:28:36] 2025-06-04 23:28:18,063 | INFO     | ..............................
[2025-06-05 01:28:36] 2025-06-04 23:28:18,063 | INFO     | . Timing measurements:
[2025-06-05 01:28:36] 2025-06-04 23:28:18,063 | INFO     | . get job = 0 s
[2025-06-05 01:28:36] 2025-06-04 23:28:18,063 | INFO     | . initial setup = 1 s
[2025-06-05 01:28:36] 2025-06-04 23:28:18,063 | INFO     | . payload setup = 5 s
[2025-06-05 01:28:36] 2025-06-04 23:28:18,063 | INFO     | . stage-in = 0 s
[2025-06-05 01:28:36] 2025-06-04 23:28:18,063 | INFO     | . payload execution = 4795 s
[2025-06-05 01:28:36] 2025-06-04 23:28:18,063 | INFO     | . stage-out = 0 s
[2025-06-05 01:28:36] 2025-06-04 23:28:18,063 | INFO     | . log creation = 0 s
[2025-06-05 01:28:36] 2025-06-04 23:28:18,063 | INFO     | ..............................
[2025-06-05 01:28:36] 2025-06-04 23:28:18,095 | INFO     | 
[2025-06-05 01:28:36] 2025-06-04 23:28:18,095 | INFO     | job summary report
[2025-06-05 01:28:36] 2025-06-04 23:28:18,095 | INFO     | --------------------------------------------------
[2025-06-05 01:28:36] 2025-06-04 23:28:18,095 | INFO     | PanDA job id: 6678391552
[2025-06-05 01:28:36] 2025-06-04 23:28:18,095 | INFO     | task id: 45006595
[2025-06-05 01:28:36] 2025-06-04 23:28:18,095 | INFO     | errors: (none)
[2025-06-05 01:28:36] 2025-06-04 23:28:18,095 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:28:36] 2025-06-04 23:28:18,095 | INFO     | pilot state: finished 
[2025-06-05 01:28:36] 2025-06-04 23:28:18,095 | INFO     | transexitcode: 0
[2025-06-05 01:28:36] 2025-06-04 23:28:18,095 | INFO     | exeerrorcode: 0
[2025-06-05 01:28:36] 2025-06-04 23:28:18,095 | INFO     | exeerrordiag: 
[2025-06-05 01:28:36] 2025-06-04 23:28:18,095 | INFO     | exitcode: 0
[2025-06-05 01:28:36] 2025-06-04 23:28:18,095 | INFO     | exitmsg: OK
[2025-06-05 01:28:36] 2025-06-04 23:28:18,095 | INFO     | cpuconsumptiontime: 13750 s
[2025-06-05 01:28:36] 2025-06-04 23:28:18,095 | INFO     | nevents: 400
[2025-06-05 01:28:36] 2025-06-04 23:28:18,095 | INFO     | neventsw: 0
[2025-06-05 01:28:36] 2025-06-04 23:28:18,095 | INFO     | pid: 3124712
[2025-06-05 01:28:36] 2025-06-04 23:28:18,095 | INFO     | pgrp: 3124712
[2025-06-05 01:28:36] 2025-06-04 23:28:18,095 | INFO     | corecount: 3
[2025-06-05 01:28:36] 2025-06-04 23:28:18,096 | INFO     | event service: False
[2025-06-05 01:28:36] 2025-06-04 23:28:18,096 | INFO     | sizes: {0: 2397345, 5: 2397551, 11: 2397607, 4803: 2423807, 4804: 2432809, 4808: 2432809, 4816: 2433107}
[2025-06-05 01:28:36] 2025-06-04 23:28:18,096 | INFO     | --------------------------------------------------
[2025-06-05 01:28:36] 2025-06-04 23:28:18,096 | INFO     | 
[2025-06-05 01:28:36] 2025-06-04 23:28:18,096 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 01:28:36] 2025-06-04 23:28:18,107 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | job 6678391552 has completed (purged errors)
[2025-06-05 01:28:36] 2025-06-04 23:28:18,108 | INFO     | overall cleanup function is called
[2025-06-05 01:28:36] 2025-06-04 23:28:19,115 | INFO     | --- collectZombieJob: --- 10, [3124712]
[2025-06-05 01:28:36] 2025-06-04 23:28:19,115 | INFO     | zombie collector waiting for pid 3124712
[2025-06-05 01:28:36] 2025-06-04 23:28:19,115 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:28:36] 2025-06-04 23:28:19,115 | INFO     | collected zombie processes
[2025-06-05 01:28:36] 2025-06-04 23:28:19,116 | INFO     | will attempt to kill all subprocesses of pid=3124712
[2025-06-05 01:28:36] 2025-06-04 23:28:19,154 | INFO     | process IDs to be killed: [3124712] (in reverse order)
[2025-06-05 01:28:36] 2025-06-04 23:28:19,180 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:28:36] 2025-06-04 23:28:19,181 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:28:36] 2025-06-04 23:28:19,184 | INFO     | did not find any defunct processes belonging to 3124712
[2025-06-05 01:28:36] 2025-06-04 23:28:19,185 | INFO     | did not find any defunct processes belonging to 3124712
[2025-06-05 01:28:36] 2025-06-04 23:28:19,186 | INFO     | ready for new job
[2025-06-05 01:28:36] 2025-06-04 23:28:19,186 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:28:36] 2025-06-04 23:28:19,186 | INFO     | **************************************
[2025-06-05 01:28:36] 2025-06-04 23:28:19,186 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:28:36] 2025-06-04 23:28:19,186 | INFO     | **************************************
[2025-06-05 01:28:36] 2025-06-04 23:28:19,186 | INFO     | 
[2025-06-05 01:28:36] 2025-06-04 23:28:19,187 | INFO     | architecture information:
[2025-06-05 01:28:36] 2025-06-04 23:28:19,187 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:28:36] 2025-06-04 23:28:19,197 | INFO     | cat /etc/os-release:
[2025-06-05 01:28:36] NAME="CentOS Linux"
[2025-06-05 01:28:36] VERSION="7 (Core)"
[2025-06-05 01:28:36] ID="centos"
[2025-06-05 01:28:36] ID_LIKE="rhel fedora"
[2025-06-05 01:28:36] VERSION_ID="7"
[2025-06-05 01:28:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:28:36] ANSI_COLOR="0;31"
[2025-06-05 01:28:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:28:36] HOME_URL="https://www.centos.org/"
[2025-06-05 01:28:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:28:36] 
[2025-06-05 01:28:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:28:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:28:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:28:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:28:36] 
[2025-06-05 01:28:36] 2025-06-04 23:28:19,197 | INFO     | **************************************
[2025-06-05 01:28:36] 2025-06-04 23:28:19,701 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 01:28:36] 2025-06-04 23:28:19,714 | INFO     | sufficient remaining disk space (326394445824 B)
[2025-06-05 01:28:36] 2025-06-04 23:28:19,714 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:28:36] 2025-06-04 23:28:19,715 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:28:36] 2025-06-04 23:28:19,715 | INFO     | update_server=False
[2025-06-05 01:28:36] 2025-06-04 23:28:19,715 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:28:36] 2025-06-04 23:28:19,715 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:28:36] 2025-06-04 23:28:19,715 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:28:36] 2025-06-04 23:28:19,715 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:28:36] 2025-06-04 23:28:19,715 | INFO     | aborting loop
[2025-06-05 01:28:36] 2025-06-04 23:28:19,793 | INFO     | all data control threads have been joined
[2025-06-05 01:28:36] 2025-06-04 23:28:20,218 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:28:36] 2025-06-04 23:28:20,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:28:36] 2025-06-04 23:28:20,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:28:36] 2025-06-04 23:28:20,302 | INFO     | all job control threads have been joined
[2025-06-05 01:28:36] 2025-06-04 23:28:20,525 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:28:36] 2025-06-04 23:28:20,721 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:28:36] 2025-06-04 23:28:20,721 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:28:36] 2025-06-04 23:28:20,722 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:28:36] 2025-06-04 23:28:20,798 | INFO     | [data] control thread has finished
[2025-06-05 01:28:36] 2025-06-04 23:28:20,812 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:28:36] 2025-06-04 23:28:21,024 | INFO     | all payload control threads have been joined
[2025-06-05 01:28:36] 2025-06-04 23:28:21,100 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:28:36] 2025-06-04 23:28:21,308 | INFO     | [job] control thread has finished
[2025-06-05 01:28:36] 2025-06-04 23:28:21,383 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:28:36] 2025-06-04 23:28:21,585 | INFO     | [job] validate thread has finished
[2025-06-05 01:28:36] 2025-06-04 23:28:21,627 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:28:36] 2025-06-04 23:28:21,676 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:28:36] 2025-06-04 23:28:21,698 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:28:36] 2025-06-04 23:28:21,720 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:28:36] 2025-06-04 23:28:22,030 | INFO     | [payload] control thread has finished
[2025-06-05 01:28:36] 2025-06-04 23:28:24,533 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:28:36] 2025-06-04 23:28:30,084 | INFO     | job.realtimelogging is not enabled
[2025-06-05 01:28:36] 2025-06-04 23:28:31,090 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:28:36] 2025-06-04 23:28:31,708 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139797227145024)>', '<ExcThread(monitor, started 139796705941248)>']
[2025-06-05 01:28:36] 2025-06-04 23:28:32,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:28:36] 2025-06-04 23:28:32,284 | INFO     | [monitor] control thread has ended
[2025-06-05 01:28:36] 2025-06-04 23:28:36,734 | INFO     | all workflow threads have been joined
[2025-06-05 01:28:36] 2025-06-04 23:28:36,734 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:28:36] 2025-06-04 23:28:36,735 | INFO     | traces error code: 0
[2025-06-05 01:28:36] 2025-06-04 23:28:36,735 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:28:36] 2025-06-04 23:28:36,781 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:28:36] 2025-06-04 23:28:36,784 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:28:36] 2025-06-04 23:28:36,787 [wrapper] pilotpid: 3118203
[2025-06-05 01:28:36] 2025-06-04 23:28:36,790 [wrapper] Pilot exit status: 0
[2025-06-05 01:28:36] 2025-06-04 23:28:36,798 [wrapper] pandaids: 6678391552
[2025-06-05 01:28:36] 2025-06-04 23:28:36,814 [wrapper] cleanup supervisor_pilot 3137198 3118204
[2025-06-05 01:28:36] 2025-06-04 23:28:36,817 [wrapper] Test setup, not cleaning
[2025-06-05 01:28:36] 2025-06-04 23:28:36,819 [wrapper] apfmon messages muted
[2025-06-05 01:28:36] 2025-06-04 23:28:36,822 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:28:36] 2025-06-04 23:28:36,824 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:28:36]  *** Error codes and diagnostics ***
[2025-06-05 01:28:36]     "exeErrorCode": 0,
[2025-06-05 01:28:36]     "exeErrorDiag": "",
[2025-06-05 01:28:36]     "pilotErrorCode": 0,
[2025-06-05 01:28:36]     "pilotErrorDiag": "",
[2025-06-05 01:28:36]  *** Listing of results directory ***
[2025-06-05 01:28:36] total 392612
[2025-06-05 01:28:36] -rw-r--r-- 1 boinc boinc    495897 Jun  4 09:04 pilot3.tar.gz
[2025-06-05 01:28:36] -rw-r--r-- 1 boinc boinc      5111 Jun  4 09:29 queuedata.json
[2025-06-05 01:28:36] -rwx------ 1 boinc boinc     37140 Jun  4 09:29 runpilot2-wrapper.sh
[2025-06-05 01:28:36] -rw-r--r-- 1 boinc boinc       100 Jun  5 00:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:28:36] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 00:07 run_atlas
[2025-06-05 01:28:36] -rw-r--r-- 1 boinc boinc       105 Jun  5 00:07 job.xml
[2025-06-05 01:28:36] -rw-r--r-- 2 boinc boinc 215443568 Jun  5 00:07 EVNT.45006593._002197.pool.root.1
[2025-06-05 01:28:36] -rw-r--r-- 1 boinc boinc      6682 Jun  5 00:07 init_data.xml
[2025-06-05 01:28:36] drwxrwx--x 2 boinc boinc      4096 Jun  5 00:07 shared
[2025-06-05 01:28:36] -rw-r--r-- 2 boinc boinc    508880 Jun  5 00:07 input.tar.gz
[2025-06-05 01:28:36] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:07 start_atlas.sh
[2025-06-05 01:28:36] -rw-r--r-- 1 boinc boinc         0 Jun  5 00:07 boinc_lockfile
[2025-06-05 01:28:36] -rw-r--r-- 1 boinc boinc      2525 Jun  5 00:07 pandaJob.out
[2025-06-05 01:28:36] -rw------- 1 boinc boinc    987032 Jun  5 00:07 agis_schedconf.cvmfs.json
[2025-06-05 01:28:36] -rw------- 1 boinc boinc   1598969 Jun  5 00:07 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:28:36] drwx------ 4 boinc boinc      4096 Jun  5 00:07 pilot3
[2025-06-05 01:28:36] -rw------- 1 boinc boinc 181357717 Jun  5 01:27 HITS.45006595._054914.pool.root.1
[2025-06-05 01:28:36] -rw-r--r-- 1 boinc boinc       529 Jun  5 01:27 boinc_task_state.xml
[2025-06-05 01:28:36] -rw------- 1 boinc boinc      1016 Jun  5 01:28 memory_monitor_summary.json
[2025-06-05 01:28:36] -rw------- 1 boinc boinc    230176 Jun  5 01:28 log.45006595._054914.job.log.tgz.1
[2025-06-05 01:28:36] -rw------- 1 boinc boinc        95 Jun  5 01:28 pilot_heartbeat.json
[2025-06-05 01:28:36] -rw------- 1 boinc boinc      7651 Jun  5 01:28 heartbeat.json
[2025-06-05 01:28:36] -rw-r--r-- 1 boinc boinc        27 Jun  5 01:28 wrapper_checkpoint.txt
[2025-06-05 01:28:36] -rw-r--r-- 1 boinc boinc      8192 Jun  5 01:28 boinc_mmap_file
[2025-06-05 01:28:36] -rw------- 1 boinc boinc      4429 Jun  5 01:28 pilotlog.txt
[2025-06-05 01:28:36] -rw------- 1 boinc boinc    471235 Jun  5 01:28 log.45006595._054914.job.log.1
[2025-06-05 01:28:36] -rw------- 1 boinc boinc       357 Jun  5 01:28 output.list
[2025-06-05 01:28:36] -rw-r--r-- 1 boinc boinc       620 Jun  5 01:28 runtime_log
[2025-06-05 01:28:36] -rw------- 1 boinc boinc    716800 Jun  5 01:28 result.tar.gz
[2025-06-05 01:28:36] -rw------- 1 boinc boinc       660 Jun  5 01:28 yoaLDmSkxg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0uaKDmtD6d5m.diag
[2025-06-05 01:28:36] -rw-r--r-- 1 boinc boinc      8743 Jun  5 01:28 runtime_log.err
[2025-06-05 01:28:36] -rw-r--r-- 1 boinc boinc     21466 Jun  5 01:28 stderr.txt
[2025-06-05 01:28:36] HITS file was successfully produced:
[2025-06-05 01:28:36] -rw------- 1 boinc boinc 181357717 Jun  5 01:27 shared/HITS.pool.root.1
[2025-06-05 01:28:36]  *** Contents of shared directory: ***
[2025-06-05 01:28:36] total 388728
[2025-06-05 01:28:36] -rw-r--r-- 2 boinc boinc 215443568 Jun  5 00:07 ATLAS.root_0
[2025-06-05 01:28:36] -rw-r--r-- 2 boinc boinc    508880 Jun  5 00:07 input.tar.gz
[2025-06-05 01:28:36] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:07 start_atlas.sh
[2025-06-05 01:28:36] -rw------- 1 boinc boinc 181357717 Jun  5 01:27 HITS.pool.root.1
[2025-06-05 01:28:36] -rw------- 1 boinc boinc    716800 Jun  5 01:28 result.tar.gz
01:28:38 (3114567): run_atlas exited; CPU time 13773.367060
01:28:38 (3114567): called boinc_finish(0)

</stderr_txt>
]]>

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