Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:22:34 (2770): wrapper (7.7.26015): starting
23:22:34 (2770): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 23:22:34] Arguments: --nthreads 8
[2025-06-04 23:22:34] Threads: 8
[2025-06-04 23:22:34] Checking for CVMFS
[2025-06-04 23:22:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:22:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:22:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:22:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:22:34] 2.11.2.0 748 33739 93492 146795 2 202 21283046 25165825 2641 130560 0 17641041 99.784 20617637 2137 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 23:22:34] CVMFS is ok
[2025-06-04 23:22:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:22:34] Checking for apptainer binary...
[2025-06-04 23:22:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:22:34] Running /usr/bin/apptainer --version
[2025-06-04 23:22:34] apptainer version 1.3.2-1.el7
[2025-06-04 23:22:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:22:36] cg-vwn379.simple-grid.lan
[2025-06-04 23:22:36] apptainer works
[2025-06-04 23:22:36] Set ATHENA_PROC_NUMBER=8
[2025-06-04 23:22:36] Set ATHENA_CORE_NUMBER=8
[2025-06-04 23:22:36] Starting ATLAS job with PandaID=6678392593
[2025-06-04 23:22:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 04:20:27]  *** The last 200 lines of the pilot log: ***
[2025-06-05 04:20:27] 2025-06-05 00:58:30,186 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:20:27] 2025-06-05 00:58:32,689 | INFO     | monitor loop #887: job 0:6678392593 is in state 'finished'
[2025-06-05 04:20:27] 2025-06-05 00:58:32,690 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:20:27] 2025-06-05 00:58:35,198 | INFO     | monitor loop #888: job 0:6678392593 is in state 'finished'
[2025-06-05 04:20:27] 2025-06-05 00:58:35,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:20:27] 2025-06-05 00:58:36,274 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 04:20:27] 2025-06-05 00:58:36,274 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6678392593/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:20:27] 2025-06-05 00:58:36,275 | INFO     | extracted standard info from prmon json
[2025-06-05 04:20:27] 2025-06-05 00:58:36,275 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 04:20:27] 2025-06-05 00:58:36,275 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 04:20:27] 2025-06-05 00:58:36,276 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 04:20:27] 2025-06-05 00:58:36,276 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 04:20:27] 2025-06-05 00:58:36,281 | INFO     | fitting pss+swap vs Time
[2025-06-05 04:20:27] 2025-06-05 00:58:36,281 | INFO     | sum of square deviations: 2912836010.0
[2025-06-05 04:20:27] 2025-06-05 00:58:36,283 | INFO     | sum of deviations: -18197305280.0
[2025-06-05 04:20:27] 2025-06-05 00:58:36,283 | INFO     | mean x: 1749078636.0
[2025-06-05 04:20:27] 2025-06-05 00:58:36,284 | INFO     | mean y: 2521665.7203791467
[2025-06-05 04:20:27] 2025-06-05 00:58:36,284 | INFO     | -- intersect: 10929507527.179157
[2025-06-05 04:20:27] 2025-06-05 00:58:36,284 | INFO     | intersect: 10929507527.179157
[2025-06-05 04:20:27] 2025-06-05 00:58:36,284 | INFO     | chi2: 1.802431166822353
[2025-06-05 04:20:27] 2025-06-05 00:58:36,285 | INFO     | sum of square deviations: 2710627567.5
[2025-06-05 04:20:27] 2025-06-05 00:58:36,286 | INFO     | sum of deviations: -17456366035.000004
[2025-06-05 04:20:27] 2025-06-05 00:58:36,287 | INFO     | mean x: 1749078483.5
[2025-06-05 04:20:27] 2025-06-05 00:58:36,287 | INFO     | mean y: 2522224.640776699
[2025-06-05 04:20:27] 2025-06-05 00:58:36,287 | INFO     | -- intersect: 11266538940.916838
[2025-06-05 04:20:27] 2025-06-05 00:58:36,287 | INFO     | intersect: 11266538940.916838
[2025-06-05 04:20:27] 2025-06-05 00:58:36,287 | INFO     | chi2: 1.8011490312492386
[2025-06-05 04:20:27] 2025-06-05 00:58:36,288 | INFO     | current chi2=1.8011490312492386 (change=0.0711336774859854 %)
[2025-06-05 04:20:27] 2025-06-05 00:58:36,288 | INFO     | right removable region: 205
[2025-06-05 04:20:27] 2025-06-05 00:58:36,288 | INFO     | sum of square deviations: 2710627567.5
[2025-06-05 04:20:27] 2025-06-05 00:58:36,292 | INFO     | sum of deviations: -52933138570.0
[2025-06-05 04:20:27] 2025-06-05 00:58:36,292 | INFO     | mean x: 1749078788.5
[2025-06-05 04:20:27] 2025-06-05 00:58:36,293 | INFO     | mean y: 2547612.3980582524
[2025-06-05 04:20:27] 2025-06-05 00:58:36,293 | INFO     | -- intersect: 34158560408.692406
[2025-06-05 04:20:27] 2025-06-05 00:58:36,293 | INFO     | intersect: 34158560408.692406
[2025-06-05 04:20:27] 2025-06-05 00:58:36,293 | INFO     | chi2: 0.21448226316760152
[2025-06-05 04:20:27] 2025-06-05 00:58:36,293 | INFO     | current chi2=0.21448226316760152 (change=88.10039089893628 %)
[2025-06-05 04:20:27] 2025-06-05 00:58:36,294 | INFO     | sum of square deviations: 2518000700.0
[2025-06-05 04:20:27] 2025-06-05 00:58:36,296 | INFO     | sum of deviations: -50571596160.0
[2025-06-05 04:20:27] 2025-06-05 00:58:36,297 | INFO     | mean x: 1749078941.0
[2025-06-05 04:20:27] 2025-06-05 00:58:36,297 | INFO     | mean y: 2545710.0149253733
[2025-06-05 04:20:27] 2025-06-05 00:58:36,297 | INFO     | -- intersect: 35131095855.45867
[2025-06-05 04:20:27] 2025-06-05 00:58:36,297 | INFO     | intersect: 35131095855.45867
[2025-06-05 04:20:27] 2025-06-05 00:58:36,298 | INFO     | chi2: 0.2041621356826808
[2025-06-05 04:20:27] 2025-06-05 00:58:36,298 | INFO     | current chi2=0.2041621356826808 (change=4.811646115863826 %)
[2025-06-05 04:20:27] 2025-06-05 00:58:36,298 | INFO     | left removable region: 20
[2025-06-05 04:20:27] 2025-06-05 00:58:36,298 | INFO     | sum of square deviations: 1963274020.0
[2025-06-05 04:20:27] 2025-06-05 00:58:36,300 | INFO     | sum of deviations: -37251468653.99999
[2025-06-05 04:20:27] 2025-06-05 00:58:36,300 | INFO     | mean x: 1749079063.0
[2025-06-05 04:20:27] 2025-06-05 00:58:36,300 | INFO     | mean y: 2536608.7837837837
[2025-06-05 04:20:27] 2025-06-05 00:58:36,300 | INFO     | -- intersect: 33189836611.211452
[2025-06-05 04:20:27] 2025-06-05 00:58:36,300 | INFO     | intersect: 33189836611.211452
[2025-06-05 04:20:27] 2025-06-05 00:58:36,301 | INFO     | chi2: 0.1888902026972537
[2025-06-05 04:20:27] 2025-06-05 00:58:36,301 | INFO     | -- intersect: 33189836611.211452
[2025-06-05 04:20:27] 2025-06-05 00:58:36,301 | INFO     | current memory leak: -18.97 B/s (using 185 data points, chi2=0.19)
[2025-06-05 04:20:27] 2025-06-05 00:58:36,302 | INFO     | ..............................
[2025-06-05 04:20:27] 2025-06-05 00:58:36,302 | INFO     | . Timing measurements:
[2025-06-05 04:20:27] 2025-06-05 00:58:36,302 | INFO     | . get job = 0 s
[2025-06-05 04:20:27] 2025-06-05 00:58:36,302 | INFO     | . initial setup = 2 s
[2025-06-05 04:20:27] 2025-06-05 00:58:36,302 | INFO     | . payload setup = 13 s
[2025-06-05 04:20:27] 2025-06-05 00:58:36,303 | INFO     | . stage-in = 0 s
[2025-06-05 04:20:27] 2025-06-05 00:58:36,303 | INFO     | . payload execution = 12872 s
[2025-06-05 04:20:27] 2025-06-05 00:58:36,303 | INFO     | . stage-out = 2 s
[2025-06-05 04:20:27] 2025-06-05 00:58:36,303 | INFO     | . log creation = 0 s
[2025-06-05 04:20:27] 2025-06-05 00:58:36,303 | INFO     | ..............................
[2025-06-05 04:20:27] 2025-06-05 00:58:36,442 | INFO     | 
[2025-06-05 04:20:27] 2025-06-05 00:58:36,442 | INFO     | job summary report
[2025-06-05 04:20:27] 2025-06-05 00:58:36,442 | INFO     | --------------------------------------------------
[2025-06-05 04:20:27] 2025-06-05 00:58:36,443 | INFO     | PanDA job id: 6678392593
[2025-06-05 04:20:27] 2025-06-05 00:58:36,443 | INFO     | task id: 45006595
[2025-06-05 04:20:27] 2025-06-05 00:58:36,443 | INFO     | errors: (none)
[2025-06-05 04:20:27] 2025-06-05 00:58:36,443 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 04:20:27] 2025-06-05 00:58:36,443 | INFO     | pilot state: finished 
[2025-06-05 04:20:27] 2025-06-05 00:58:36,443 | INFO     | transexitcode: 0
[2025-06-05 04:20:27] 2025-06-05 00:58:36,443 | INFO     | exeerrorcode: 0
[2025-06-05 04:20:27] 2025-06-05 00:58:36,444 | INFO     | exeerrordiag: 
[2025-06-05 04:20:27] 2025-06-05 00:58:36,444 | INFO     | exitcode: 0
[2025-06-05 04:20:27] 2025-06-05 00:58:36,444 | INFO     | exitmsg: OK
[2025-06-05 04:20:27] 2025-06-05 00:58:36,444 | INFO     | cpuconsumptiontime: 48647 s
[2025-06-05 04:20:27] 2025-06-05 00:58:36,444 | INFO     | nevents: 400
[2025-06-05 04:20:27] 2025-06-05 00:58:36,444 | INFO     | neventsw: 0
[2025-06-05 04:20:27] 2025-06-05 00:58:36,444 | INFO     | pid: 14980
[2025-06-05 04:20:27] 2025-06-05 00:58:36,444 | INFO     | pgrp: 14980
[2025-06-05 04:20:27] 2025-06-05 00:58:36,444 | INFO     | corecount: 8
[2025-06-05 04:20:27] 2025-06-05 00:58:36,445 | INFO     | event service: False
[2025-06-05 04:20:27] 2025-06-05 00:58:36,445 | INFO     | sizes: {0: 2397336, 1: 2397364, 9: 2397570, 12: 2397598, 12890: 2426771, 12891: 2426770, 12894: 2435951, 12920: 2436065}
[2025-06-05 04:20:27] 2025-06-05 00:58:36,445 | INFO     | --------------------------------------------------
[2025-06-05 04:20:27] 2025-06-05 00:58:36,445 | INFO     | 
[2025-06-05 04:20:27] 2025-06-05 00:58:36,445 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-06-05 04:20:27] 2025-06-05 00:58:36,523 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 04:20:27] 2025-06-05 00:58:36,523 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 04:20:27] 2025-06-05 00:58:36,523 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 04:20:27] 2025-06-05 00:58:36,523 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 04:20:27] 2025-06-05 00:58:36,524 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 04:20:27] 2025-06-05 00:58:36,524 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 04:20:27] 2025-06-05 00:58:36,524 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 04:20:27] 2025-06-05 00:58:36,524 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 04:20:27] 2025-06-05 00:58:36,524 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 04:20:27] 2025-06-05 00:58:36,524 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 04:20:27] 2025-06-05 00:58:36,524 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 04:20:27] 2025-06-05 00:58:36,524 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 04:20:27] 2025-06-05 00:58:36,524 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 04:20:27] 2025-06-05 00:58:36,525 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 04:20:27] 2025-06-05 00:58:36,525 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 04:20:27] 2025-06-05 00:58:36,525 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 04:20:27] 2025-06-05 00:58:36,525 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 04:20:27] 2025-06-05 00:58:36,525 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 04:20:27] 2025-06-05 00:58:36,525 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 04:20:27] 2025-06-05 00:58:36,525 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 04:20:27] 2025-06-05 00:58:36,525 | INFO     | job 6678392593 has completed (purged errors)
[2025-06-05 04:20:27] 2025-06-05 00:58:36,526 | INFO     | overall cleanup function is called
[2025-06-05 04:20:27] 2025-06-05 00:58:37,535 | INFO     | --- collectZombieJob: --- 10, [14980]
[2025-06-05 04:20:27] 2025-06-05 00:58:37,536 | INFO     | zombie collector waiting for pid 14980
[2025-06-05 04:20:27] 2025-06-05 00:58:37,536 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 04:20:27] 2025-06-05 00:58:37,536 | INFO     | collected zombie processes
[2025-06-05 04:20:27] 2025-06-05 00:58:37,536 | INFO     | will attempt to kill all subprocesses of pid=14980
[2025-06-05 04:20:27] 2025-06-05 00:58:37,674 | INFO     | process IDs to be killed: [14980] (in reverse order)
[2025-06-05 04:20:27] 2025-06-05 00:58:38,420 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 04:20:27] 2025-06-05 00:58:38,421 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 04:20:27] 2025-06-05 00:58:38,424 | INFO     | did not find any defunct processes belonging to 14980
[2025-06-05 04:20:27] 2025-06-05 00:58:38,428 | INFO     | did not find any defunct processes belonging to 14980
[2025-06-05 04:20:27] 2025-06-05 00:58:38,428 | INFO     | ready for new job
[2025-06-05 04:20:27] 2025-06-05 00:58:38,428 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 04:20:27] 2025-06-05 00:58:38,430 | INFO     | **************************************
[2025-06-05 04:20:27] 2025-06-05 00:58:38,430 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 04:20:27] 2025-06-05 00:58:38,430 | INFO     | **************************************
[2025-06-05 04:20:27] 2025-06-05 00:58:38,431 | INFO     | 
[2025-06-05 04:20:27] 2025-06-05 00:58:38,436 | INFO     | pilot is running in a VM
[2025-06-05 04:20:27] 2025-06-05 00:58:38,437 | INFO     | architecture information:
[2025-06-05 04:20:27] 2025-06-05 00:58:38,443 | INFO     | executing command: cat /etc/os-release
[2025-06-05 04:20:27] 2025-06-05 00:58:38,738 | INFO     | cat /etc/os-release:
[2025-06-05 04:20:27] NAME="CentOS Linux"
[2025-06-05 04:20:27] VERSION="7 (Core)"
[2025-06-05 04:20:27] ID="centos"
[2025-06-05 04:20:27] ID_LIKE="rhel fedora"
[2025-06-05 04:20:27] VERSION_ID="7"
[2025-06-05 04:20:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 04:20:27] ANSI_COLOR="0;31"
[2025-06-05 04:20:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 04:20:27] HOME_URL="https://www.centos.org/"
[2025-06-05 04:20:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 04:20:27] 
[2025-06-05 04:20:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 04:20:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 04:20:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 04:20:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 04:20:27] 
[2025-06-05 04:20:27] 2025-06-05 00:58:38,739 | INFO     | **************************************
[2025-06-05 04:20:27] 2025-06-05 00:58:39,026 | INFO     | 12944s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 04:20:27] 2025-06-05 00:58:39,242 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-06-05 04:20:27] 2025-06-05 00:58:39,370 | INFO     | sufficient remaining disk space (497544069120 B)
[2025-06-05 04:20:27] 2025-06-05 00:58:39,371 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 04:20:27] 2025-06-05 00:58:39,371 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 04:20:27] 2025-06-05 00:58:39,371 | INFO     | update_server=False
[2025-06-05 04:20:27] 2025-06-05 00:58:39,371 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 04:20:27] 2025-06-05 00:58:39,372 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:20:27] 2025-06-05 00:58:39,372 | INFO     | aborting loop
[2025-06-05 04:20:27] 2025-06-05 00:58:39,373 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 04:20:27] 2025-06-05 00:58:39,379 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 04:20:27] 2025-06-05 00:58:39,730 | INFO     | all job control threads have been joined
[2025-06-05 04:20:27] 2025-06-05 00:58:39,739 | INFO     | all payload control threads have been joined
[2025-06-05 04:20:27] 2025-06-05 00:58:40,032 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 04:20:27] 2025-06-05 00:58:40,033 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 04:20:27] 2025-06-05 00:58:40,033 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 04:20:27] 2025-06-05 00:58:40,072 | INFO     | all data control threads have been joined
[2025-06-05 04:20:27] 2025-06-05 00:58:40,377 | INFO     | [job] retrieve thread has finished
[2025-06-05 04:20:27] 2025-06-05 00:58:40,378 | INFO     | [job] job monitor thread has finished
[2025-06-05 04:20:27] 2025-06-05 00:58:40,395 | INFO     | [job] validate thread has finished
[2025-06-05 04:20:27] 2025-06-05 00:58:40,462 | INFO     | [data] copytool_in thread has finished
[2025-06-05 04:20:27] 2025-06-05 00:58:40,544 | INFO     | [payload] validate_post thread has finished
[2025-06-05 04:20:27] 2025-06-05 00:58:40,669 | INFO     | [payload] failed_post thread has finished
[2025-06-05 04:20:27] 2025-06-05 00:58:40,736 | INFO     | [job] control thread has finished
[2025-06-05 04:20:27] 2025-06-05 00:58:40,745 | INFO     | [payload] control thread has finished
[2025-06-05 04:20:27] 2025-06-05 00:58:40,902 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 04:20:27] 2025-06-05 00:58:41,078 | INFO     | [data] control thread has finished
[2025-06-05 04:20:27] 2025-06-05 00:58:41,220 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 04:20:27] 2025-06-05 00:58:41,386 | INFO     | [data] copytool_out thread has finished
[2025-06-05 04:20:27] 2025-06-05 00:58:41,456 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:20:27] 2025-06-05 00:58:41,505 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 04:20:27] 2025-06-05 00:58:42,461 | INFO     | [job] queue monitor thread has finished
[2025-06-05 04:20:27] 2025-06-05 00:58:43,381 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 04:20:27] 2025-06-05 00:58:50,345 | INFO     | job.realtimelogging is not enabled
[2025-06-05 04:20:27] 2025-06-05 00:58:51,350 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 04:20:27] 2025-06-05 00:58:52,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566792976192)>', '<ExcThread(monitor, started 140566176175872)>']
[2025-06-05 04:20:27] 2025-06-05 00:58:53,109 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 04:20:27] 2025-06-05 00:58:53,110 | INFO     | [monitor] control thread has ended
[2025-06-05 04:20:27] 2025-06-05 00:58:57,590 | INFO     | all workflow threads have been joined
[2025-06-05 04:20:27] 2025-06-05 00:58:57,591 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 04:20:27] 2025-06-05 00:58:57,591 | INFO     | traces error code: 0
[2025-06-05 04:20:27] 2025-06-05 00:58:57,591 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 04:20:27] 2025-06-05 00:58:57,903 [wrapper] ==== pilot stdout END ====
[2025-06-05 04:20:27] 2025-06-05 00:58:57,989 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 04:20:27] 2025-06-05 00:58:58,074 [wrapper] pilotpid: 8443
[2025-06-05 04:20:27] 2025-06-05 00:58:58,140 [wrapper] Pilot exit status: 0
[2025-06-05 04:20:27] 2025-06-05 00:58:58,638 [wrapper] pandaids: 6678392593
[2025-06-05 04:20:27] 2025-06-05 00:58:59,512 [wrapper] cleanup supervisor_pilot 21523 8444
[2025-06-05 04:20:27] 2025-06-05 00:58:59,591 [wrapper] Test setup, not cleaning
[2025-06-05 04:20:27] 2025-06-05 00:58:59,662 [wrapper] apfmon messages muted
[2025-06-05 04:20:27] 2025-06-05 00:58:59,733 [wrapper] ==== wrapper stdout END ====
[2025-06-05 04:20:27] 2025-06-05 00:58:59,834 [wrapper] ==== wrapper stderr END ====
[2025-06-05 04:20:27]  *** Error codes and diagnostics ***
[2025-06-05 04:20:27]     "exeErrorCode": 0,
[2025-06-05 04:20:27]     "exeErrorDiag": "",
[2025-06-05 04:20:27]     "pilotErrorCode": 0,
[2025-06-05 04:20:27]     "pilotErrorDiag": "",
[2025-06-05 04:20:27]  *** Listing of results directory ***
[2025-06-05 04:20:27] total 284168
[2025-06-05 04:20:27] -rw-r--r--. 1 boinc boinc    495897 Jun  4 09:34 pilot3.tar.gz
[2025-06-05 04:20:27] -rwx------. 1 boinc boinc     37140 Jun  4 09:40 runpilot2-wrapper.sh
[2025-06-05 04:20:27] -rw-r--r--. 1 boinc boinc      5111 Jun  4 09:40 queuedata.json
[2025-06-05 04:20:27] -rw-r--r--. 1 boinc boinc       100 Jun  4 23:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 04:20:27] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 23:22 run_atlas
[2025-06-05 04:20:27] -rw-r--r--. 1 boinc boinc       105 Jun  4 23:22 job.xml
[2025-06-05 04:20:27] -rw-r--r--. 2 boinc boinc 108405889 Jun  4 23:22 EVNT.45006593._002212.pool.root.1
[2025-06-05 04:20:27] -rw-r--r--. 1 boinc boinc      6392 Jun  4 23:22 init_data.xml
[2025-06-05 04:20:27] -rw-r--r--. 2 boinc boinc     15093 Jun  4 23:22 start_atlas.sh
[2025-06-05 04:20:27] drwxrwx--x. 2 boinc boinc        68 Jun  4 23:22 shared
[2025-06-05 04:20:27] -rw-r--r--. 2 boinc boinc    508878 Jun  4 23:22 input.tar.gz
[2025-06-05 04:20:27] -rw-r--r--. 1 boinc boinc         0 Jun  4 23:22 boinc_lockfile
[2025-06-05 04:20:27] -rw-r--r--. 1 boinc boinc      2522 Jun  4 23:22 pandaJob.out
[2025-06-05 04:20:27] -rw-------. 1 boinc boinc    987032 Jun  4 23:22 agis_schedconf.cvmfs.json
[2025-06-05 04:20:27] drwx------. 4 boinc boinc      4096 Jun  4 23:22 pilot3
[2025-06-05 04:20:27] -rw-------. 1 boinc boinc 175793714 Jun  5 02:57 HITS.45006595._055276.pool.root.1
[2025-06-05 04:20:27] -rw-r--r--. 1 boinc boinc       531 Jun  5 02:57 boinc_task_state.xml
[2025-06-05 04:20:27] -rw-------. 1 boinc boinc      1017 Jun  5 02:58 memory_monitor_summary.json
[2025-06-05 04:20:27] -rw-------. 1 boinc boinc   1598969 Jun  5 02:58 agis_ddmendpoints.agis.ALL.json
[2025-06-05 04:20:27] -rw-------. 1 boinc boinc    361950 Jun  5 02:58 log.45006595._055276.job.log.tgz.1
[2025-06-05 04:20:27] -rw-------. 1 boinc boinc        95 Jun  5 02:58 pilot_heartbeat.json
[2025-06-05 04:20:27] -rw-------. 1 boinc boinc      7687 Jun  5 02:58 heartbeat.json
[2025-06-05 04:20:27] -rw-------. 1 boinc boinc      4604 Jun  5 02:58 pilotlog.txt
[2025-06-05 04:20:27] -rw-------. 1 boinc boinc   1120247 Jun  5 02:58 log.45006595._055276.job.log.1
[2025-06-05 04:20:27] -rw-------. 1 boinc boinc       357 Jun  5 02:59 output.list
[2025-06-05 04:20:27] -rw-r--r--. 1 boinc boinc       620 Jun  5 02:59 runtime_log
[2025-06-05 04:20:27] -rw-------. 1 boinc boinc   1505280 Jun  5 02:59 result.tar.gz
[2025-06-05 04:20:27] -rw-r--r--. 1 boinc boinc      8659 Jun  5 02:59 runtime_log.err
[2025-06-05 04:20:27] -rw-------. 1 boinc boinc       656 Jun  5 02:59 d2DODmCvxg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmjwaKDm63whYm.diag
[2025-06-05 04:20:27] -rw-r--r--. 1 boinc boinc      8192 Jun  5 04:20 boinc_mmap_file
[2025-06-05 04:20:27] -rw-r--r--. 1 boinc boinc        28 Jun  5 04:20 wrapper_checkpoint.txt
[2025-06-05 04:20:27] -rw-r--r--. 1 boinc boinc     20719 Jun  5 04:20 stderr.txt
[2025-06-05 04:20:27] HITS file was successfully produced:
[2025-06-05 04:20:27] -rw-------. 1 boinc boinc 175793714 Jun  5 02:57 shared/HITS.pool.root.1
[2025-06-05 04:20:27]  *** Contents of shared directory: ***
[2025-06-05 04:20:27] total 279532
[2025-06-05 04:20:27] -rw-r--r--. 2 boinc boinc 108405889 Jun  4 23:22 ATLAS.root_0
[2025-06-05 04:20:27] -rw-r--r--. 2 boinc boinc     15093 Jun  4 23:22 start_atlas.sh
[2025-06-05 04:20:27] -rw-r--r--. 2 boinc boinc    508878 Jun  4 23:22 input.tar.gz
[2025-06-05 04:20:27] -rw-------. 1 boinc boinc 175793714 Jun  5 02:57 HITS.pool.root.1
[2025-06-05 04:20:27] -rw-------. 1 boinc boinc   1505280 Jun  5 02:59 result.tar.gz
04:20:29 (2770): run_atlas exited; CPU time 48808.694094
04:20:29 (2770): called boinc_finish(0)

</stderr_txt>
]]>

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