Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:13:52 (294231): wrapper (7.7.26015): starting
08:13:52 (294231): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:13:52] Arguments: --nthreads 8
[2025-06-04 08:13:52] Threads: 8
[2025-06-04 08:13:52] Checking for CVMFS
[2025-06-04 08:13:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:13:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:13:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:13:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:13:53] 2.12.6.0 47114 804 120756 146779 0 195 31655373 32935937 22355 16776704 0 7886144 99.791 2994681 24738 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:13:53] CVMFS is ok
[2025-06-04 08:13:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:13:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:13:53] Further information can be found at the LHC@home message board.
[2025-06-04 08:13:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:13:53] Checking for apptainer binary...
[2025-06-04 08:13:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:13:53] Running /usr/bin/apptainer --version
[2025-06-04 08:13:53] apptainer version 1.4.1-1.el9
[2025-06-04 08:13:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:13:53] c7-2-15.aglt2.org
[2025-06-04 08:13:53] apptainer works
[2025-06-04 08:13:53] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:13:53] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:13:53] Starting ATLAS job with PandaID=6678756308
[2025-06-04 08:13:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:50:12]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:50:12] 2025-06-04 13:49:35,719 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678756308/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:50:12] 2025-06-04 13:49:35,720 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2977422 B
[2025-06-04 09:50:12] 2025-06-04 13:49:35,720 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15540 B
[2025-06-04 09:50:12] 2025-06-04 13:49:35,721 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 09:50:12] 2025-06-04 13:49:35,779 | INFO     | sufficient remaining disk space (75551997952 B)
[2025-06-04 09:50:12] 2025-06-04 13:49:35,779 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 09:50:12] 2025-06-04 13:49:35,780 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6678756308: 3283539 B (within 2537553920 B limit)
[2025-06-04 09:50:12] 2025-06-04 13:49:35,780 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6678756308/HITS.45006595._055529.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 09:50:12] 2025-06-04 13:49:35,780 | INFO     | total size of present files: 0 B (workdir size: 3283539 B)
[2025-06-04 09:50:12] 2025-06-04 13:49:35,780 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6678756308/HITS.45006595._055529.pool.root.1 since it does not exist
[2025-06-04 09:50:12] 2025-06-04 13:49:36,414 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:50:12] 2025-06-04 13:49:36,948 | INFO     | number of running child processes to parent process 306755: 1
[2025-06-04 09:50:12] 2025-06-04 13:49:36,948 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:50:12] 2025-06-04 13:49:37,164 | INFO     | job 6678756308 has state=finished
[2025-06-04 09:50:12] 2025-06-04 13:49:37,165 | INFO     | preparing for final server update for job 6678756308 in state='finished'
[2025-06-04 09:50:12] 2025-06-04 13:49:37,165 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:50:12] 2025-06-04 13:49:37,165 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:50:12] 2025-06-04 13:49:37,165 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:50:12] 2025-06-04 13:49:37,165 | INFO     | job 6678756308 has finished - writing final server update
[2025-06-04 09:50:12] 2025-06-04 13:49:37,166 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:50:12] 2025-06-04 13:49:37,212 | INFO     | executing command: lscpu
[2025-06-04 09:50:12] 2025-06-04 13:49:37,468 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:50:12] 2025-06-04 13:49:39,456 | INFO     | monitor loop #400: job 0:6678756308 is in state 'finished'
[2025-06-04 09:50:12] 2025-06-04 13:49:39,457 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:50:12] 2025-06-04 13:49:40,111 | INFO     | PID=299028 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 09:50:12] 2025-06-04 13:49:40,112 | INFO     | .. there are 29 such processes running
[2025-06-04 09:50:12] 2025-06-04 13:49:41,974 | INFO     | monitor loop #401: job 0:6678756308 is in state 'finished'
[2025-06-04 09:50:12] 2025-06-04 13:49:41,975 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:50:12] 2025-06-04 13:49:44,486 | INFO     | monitor loop #402: job 0:6678756308 is in state 'finished'
[2025-06-04 09:50:12] 2025-06-04 13:49:44,487 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:50:12] 2025-06-04 13:49:46,993 | INFO     | monitor loop #403: job 0:6678756308 is in state 'finished'
[2025-06-04 09:50:12] 2025-06-04 13:49:46,994 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:50:12] 2025-06-04 13:49:49,522 | INFO     | monitor loop #404: job 0:6678756308 is in state 'finished'
[2025-06-04 09:50:12] 2025-06-04 13:49:49,524 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:50:12] 2025-06-04 13:49:52,033 | INFO     | monitor loop #405: job 0:6678756308 is in state 'finished'
[2025-06-04 09:50:12] 2025-06-04 13:49:52,034 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:50:12] 2025-06-04 13:49:54,545 | INFO     | monitor loop #406: job 0:6678756308 is in state 'finished'
[2025-06-04 09:50:12] 2025-06-04 13:49:54,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:50:12] 2025-06-04 13:49:54,622 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 09:50:12] 2025-06-04 13:49:54,622 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678756308/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:50:12] 2025-06-04 13:49:54,623 | INFO     | extracted standard info from prmon json
[2025-06-04 09:50:12] 2025-06-04 13:49:54,623 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:50:12] 2025-06-04 13:49:54,623 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:50:12] 2025-06-04 13:49:54,623 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:50:12] 2025-06-04 13:49:54,623 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:50:12] 2025-06-04 13:49:54,625 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:50:12] 2025-06-04 13:49:54,625 | INFO     | sum of square deviations: 204168098.9885056
[2025-06-04 09:50:12] 2025-06-04 13:49:54,637 | INFO     | sum of deviations: 11607869271.2184
[2025-06-04 09:50:12] 2025-06-04 13:49:54,637 | INFO     | mean x: 1749042206.0114942
[2025-06-04 09:50:12] 2025-06-04 13:49:54,637 | INFO     | mean y: 2464706.7816091953
[2025-06-04 09:50:12] 2025-06-04 13:49:54,637 | INFO     | -- intersect: -99438404742.50427
[2025-06-04 09:50:12] 2025-06-04 13:49:54,637 | INFO     | intersect: -99438404742.50427
[2025-06-04 09:50:12] 2025-06-04 13:49:54,637 | INFO     | chi2: 1.2728999397821936
[2025-06-04 09:50:12] 2025-06-04 13:49:54,637 | INFO     | -- intersect: -99438404742.50427
[2025-06-04 09:50:12] 2025-06-04 13:49:54,637 | INFO     | current memory leak: 56.85 B/s (using 87 data points, chi2=1.27)
[2025-06-04 09:50:12] 2025-06-04 13:49:54,638 | INFO     | ..............................
[2025-06-04 09:50:12] 2025-06-04 13:49:54,638 | INFO     | . Timing measurements:
[2025-06-04 09:50:12] 2025-06-04 13:49:54,638 | INFO     | . get job = 0 s
[2025-06-04 09:50:12] 2025-06-04 13:49:54,638 | INFO     | . initial setup = 2 s
[2025-06-04 09:50:12] 2025-06-04 13:49:54,638 | INFO     | . payload setup = 9 s
[2025-06-04 09:50:12] 2025-06-04 13:49:54,638 | INFO     | . stage-in = 0 s
[2025-06-04 09:50:12] 2025-06-04 13:49:54,638 | INFO     | . payload execution = 5694 s
[2025-06-04 09:50:12] 2025-06-04 13:49:54,639 | INFO     | . stage-out = 3 s
[2025-06-04 09:50:12] 2025-06-04 13:49:54,639 | INFO     | . log creation = 0 s
[2025-06-04 09:50:12] 2025-06-04 13:49:54,639 | INFO     | ..............................
[2025-06-04 09:50:12] 2025-06-04 13:49:55,046 | INFO     | 
[2025-06-04 09:50:12] 2025-06-04 13:49:55,047 | INFO     | job summary report
[2025-06-04 09:50:12] 2025-06-04 13:49:55,047 | INFO     | --------------------------------------------------
[2025-06-04 09:50:12] 2025-06-04 13:49:55,047 | INFO     | PanDA job id: 6678756308
[2025-06-04 09:50:12] 2025-06-04 13:49:55,047 | INFO     | task id: 45006595
[2025-06-04 09:50:12] 2025-06-04 13:49:55,047 | INFO     | errors: (none)
[2025-06-04 09:50:12] 2025-06-04 13:49:55,047 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:50:12] 2025-06-04 13:49:55,047 | INFO     | pilot state: finished 
[2025-06-04 09:50:12] 2025-06-04 13:49:55,047 | INFO     | transexitcode: 0
[2025-06-04 09:50:12] 2025-06-04 13:49:55,047 | INFO     | exeerrorcode: 0
[2025-06-04 09:50:12] 2025-06-04 13:49:55,047 | INFO     | exeerrordiag: 
[2025-06-04 09:50:12] 2025-06-04 13:49:55,047 | INFO     | exitcode: 0
[2025-06-04 09:50:12] 2025-06-04 13:49:55,048 | INFO     | exitmsg: OK
[2025-06-04 09:50:12] 2025-06-04 13:49:55,048 | INFO     | cpuconsumptiontime: 26543 s
[2025-06-04 09:50:12] 2025-06-04 13:49:55,048 | INFO     | nevents: 400
[2025-06-04 09:50:12] 2025-06-04 13:49:55,048 | INFO     | neventsw: 0
[2025-06-04 09:50:12] 2025-06-04 13:49:55,048 | INFO     | pid: 306755
[2025-06-04 09:50:12] 2025-06-04 13:49:55,048 | INFO     | pgrp: 306755
[2025-06-04 09:50:12] 2025-06-04 13:49:55,048 | INFO     | corecount: 8
[2025-06-04 09:50:12] 2025-06-04 13:49:55,048 | INFO     | event service: False
[2025-06-04 09:50:12] 2025-06-04 13:49:55,048 | INFO     | sizes: {0: 2397284, 6: 2397490, 11: 2397518, 5707: 2423974, 5708: 2423973, 5712: 2432970, 5714: 2433182, 5732: 2433352}
[2025-06-04 09:50:12] 2025-06-04 13:49:55,048 | INFO     | --------------------------------------------------
[2025-06-04 09:50:12] 2025-06-04 13:49:55,048 | INFO     | 
[2025-06-04 09:50:12] 2025-06-04 13:49:55,048 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 09:50:12] 2025-06-04 13:49:55,075 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:50:12] 2025-06-04 13:49:55,075 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:50:12] 2025-06-04 13:49:55,075 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:50:12] 2025-06-04 13:49:55,075 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:50:12] 2025-06-04 13:49:55,076 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:50:12] 2025-06-04 13:49:55,076 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:50:12] 2025-06-04 13:49:55,076 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:50:12] 2025-06-04 13:49:55,076 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:50:12] 2025-06-04 13:49:55,076 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:50:12] 2025-06-04 13:49:55,076 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:50:12] 2025-06-04 13:49:55,076 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:50:12] 2025-06-04 13:49:55,076 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:50:12] 2025-06-04 13:49:55,076 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:50:12] 2025-06-04 13:49:55,076 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:50:12] 2025-06-04 13:49:55,076 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:50:12] 2025-06-04 13:49:55,076 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:50:12] 2025-06-04 13:49:55,076 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:50:12] 2025-06-04 13:49:55,076 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:50:12] 2025-06-04 13:49:55,076 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:50:12] 2025-06-04 13:49:55,076 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:50:12] 2025-06-04 13:49:55,077 | INFO     | job 6678756308 has completed (purged errors)
[2025-06-04 09:50:12] 2025-06-04 13:49:55,077 | INFO     | overall cleanup function is called
[2025-06-04 09:50:12] 2025-06-04 13:49:56,096 | INFO     | --- collectZombieJob: --- 10, [306755]
[2025-06-04 09:50:12] 2025-06-04 13:49:56,097 | INFO     | zombie collector waiting for pid 306755
[2025-06-04 09:50:12] 2025-06-04 13:49:56,097 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:50:12] 2025-06-04 13:49:56,097 | INFO     | collected zombie processes
[2025-06-04 09:50:12] 2025-06-04 13:49:56,097 | INFO     | will attempt to kill all subprocesses of pid=306755
[2025-06-04 09:50:12] 2025-06-04 13:49:57,828 | INFO     | process IDs to be killed: [306755] (in reverse order)
[2025-06-04 09:50:12] 2025-06-04 13:49:58,248 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:50:12] 2025-06-04 13:49:58,248 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:50:12] 2025-06-04 13:49:58,362 | INFO     | did not find any defunct processes belonging to 306755
[2025-06-04 09:50:12] 2025-06-04 13:49:58,464 | INFO     | did not find any defunct processes belonging to 306755
[2025-06-04 09:50:12] 2025-06-04 13:49:58,464 | INFO     | ready for new job
[2025-06-04 09:50:12] 2025-06-04 13:49:58,464 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:50:12] 2025-06-04 13:49:58,485 | INFO     | **************************************
[2025-06-04 09:50:12] 2025-06-04 13:49:58,485 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:50:12] 2025-06-04 13:49:58,485 | INFO     | **************************************
[2025-06-04 09:50:12] 2025-06-04 13:49:58,485 | INFO     | 
[2025-06-04 09:50:12] 2025-06-04 13:49:58,525 | INFO     | architecture information:
[2025-06-04 09:50:12] 2025-06-04 13:49:58,532 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:50:12] 2025-06-04 13:49:58,679 | INFO     | cat /etc/os-release:
[2025-06-04 09:50:12] NAME="CentOS Linux"
[2025-06-04 09:50:12] VERSION="7 (Core)"
[2025-06-04 09:50:12] ID="centos"
[2025-06-04 09:50:12] ID_LIKE="rhel fedora"
[2025-06-04 09:50:12] VERSION_ID="7"
[2025-06-04 09:50:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:50:12] ANSI_COLOR="0;31"
[2025-06-04 09:50:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:50:12] HOME_URL="https://www.centos.org/"
[2025-06-04 09:50:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:50:12] 
[2025-06-04 09:50:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:50:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:50:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:50:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:50:12] 
[2025-06-04 09:50:12] 2025-06-04 13:49:58,680 | INFO     | **************************************
[2025-06-04 09:50:12] 2025-06-04 13:49:59,184 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 09:50:12] 2025-06-04 13:49:59,215 | INFO     | sufficient remaining disk space (75556192256 B)
[2025-06-04 09:50:12] 2025-06-04 13:49:59,215 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:50:12] 2025-06-04 13:49:59,216 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:50:12] 2025-06-04 13:49:59,216 | INFO     | update_server=False
[2025-06-04 09:50:12] 2025-06-04 13:49:59,216 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:50:12] 2025-06-04 13:49:59,219 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:50:12] 2025-06-04 13:49:59,224 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:50:12] 2025-06-04 13:49:59,224 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:50:12] 2025-06-04 13:49:59,224 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:50:12] 2025-06-04 13:49:59,223 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:50:12] 2025-06-04 13:49:59,392 | INFO     | all data control threads have been joined
[2025-06-04 09:50:12] 2025-06-04 13:49:59,646 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 09:50:12] 2025-06-04 13:49:59,647 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 09:50:12] 2025-06-04 13:49:59,647 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:50:12] 2025-06-04 13:49:59,647 | INFO     | will abort loop
[2025-06-04 09:50:12] 2025-06-04 13:49:59,811 | INFO     | all payload control threads have been joined
[2025-06-04 09:50:12] 2025-06-04 13:50:00,149 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:50:12] 2025-06-04 13:50:00,222 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:50:12] 2025-06-04 13:50:00,311 | INFO     | all job control threads have been joined
[2025-06-04 09:50:12] 2025-06-04 13:50:00,385 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:50:12] 2025-06-04 13:50:00,399 | INFO     | [data] control thread has finished
[2025-06-04 09:50:12] 2025-06-04 13:50:00,664 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:50:12] 2025-06-04 13:50:00,837 | INFO     | [payload] control thread has finished
[2025-06-04 09:50:12] 2025-06-04 13:50:00,851 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:50:12] 2025-06-04 13:50:00,958 | INFO     | [job] validate thread has finished
[2025-06-04 09:50:12] 2025-06-04 13:50:00,958 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:50:12] 2025-06-04 13:50:00,962 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:50:12] 2025-06-04 13:50:01,160 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:50:12] 2025-06-04 13:50:01,234 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:50:12] 2025-06-04 13:50:01,309 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:50:12] 2025-06-04 13:50:01,319 | INFO     | [job] control thread has finished
[2025-06-04 09:50:12] 2025-06-04 13:50:01,359 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:50:12] 2025-06-04 13:50:01,598 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:50:12] 2025-06-04 13:50:01,784 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:50:12] 2025-06-04 13:50:04,862 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:50:12] 2025-06-04 13:50:06,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348220565312)>', '<ExcThread(monitor, started 140347510351616)>']
[2025-06-04 09:50:12] 2025-06-04 13:50:07,294 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:50:12] 2025-06-04 13:50:07,295 | INFO     | [monitor] control thread has ended
[2025-06-04 09:50:12] 2025-06-04 13:50:11,652 | INFO     | all workflow threads have been joined
[2025-06-04 09:50:12] 2025-06-04 13:50:11,653 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:50:12] 2025-06-04 13:50:11,653 | INFO     | traces error code: 0
[2025-06-04 09:50:12] 2025-06-04 13:50:11,653 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:50:12] 2025-06-04 13:50:12,138 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:50:12] 2025-06-04 13:50:12,166 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:50:12] 2025-06-04 13:50:12,190 [wrapper] pilotpid: 299028
[2025-06-04 09:50:12] 2025-06-04 13:50:12,212 [wrapper] Pilot exit status: 0
[2025-06-04 09:50:12] 2025-06-04 13:50:12,372 [wrapper] pandaids: 6678756308
[2025-06-04 09:50:12] 2025-06-04 13:50:12,474 [wrapper] cleanup supervisor_pilot 1070548 299029
[2025-06-04 09:50:12] 2025-06-04 13:50:12,478 [wrapper] Test setup, not cleaning
[2025-06-04 09:50:12] 2025-06-04 13:50:12,486 [wrapper] apfmon messages muted
[2025-06-04 09:50:12] 2025-06-04 13:50:12,493 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:50:12] 2025-06-04 13:50:12,496 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:50:12]  *** Error codes and diagnostics ***
[2025-06-04 09:50:12]     "exeErrorCode": 0,
[2025-06-04 09:50:12]     "exeErrorDiag": "",
[2025-06-04 09:50:12]     "pilotErrorCode": 0,
[2025-06-04 09:50:12]     "pilotErrorDiag": "",
[2025-06-04 09:50:12]  *** Listing of results directory ***
[2025-06-04 09:50:12] total 388344
[2025-06-04 09:50:12] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 09:50:12] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:51 queuedata.json
[2025-06-04 09:50:12] -rwx------. 1 boincer umatlas     37140 Jun  4 03:53 runpilot2-wrapper.sh
[2025-06-04 09:50:12] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:50:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:13 run_atlas
[2025-06-04 09:50:12] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:13 job.xml
[2025-06-04 09:50:12] -rw-r--r--. 2 boincer umatlas 215987960 Jun  4 08:13 EVNT.45006593._000099.pool.root.1
[2025-06-04 09:50:12] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 08:13 input.tar.gz
[2025-06-04 09:50:12] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:13 start_atlas.sh
[2025-06-04 09:50:12] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:13 shared
[2025-06-04 09:50:12] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:13 boinc_lockfile
[2025-06-04 09:50:12] -rw-r--r--. 1 boincer umatlas      2521 Jun  4 08:13 pandaJob.out
[2025-06-04 09:50:12] -rw-------. 1 boincer umatlas    986812 Jun  4 08:14 agis_schedconf.cvmfs.json
[2025-06-04 09:50:12] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:14 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:50:12] drwx------. 4 boincer umatlas      4096 Jun  4 08:14 pilot3
[2025-06-04 09:50:12] -rw-------. 1 boincer umatlas 176150882 Jun  4 09:48 HITS.45006595._055529.pool.root.1
[2025-06-04 09:50:12] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:48 boinc_task_state.xml
[2025-06-04 09:50:12] -rw-------. 1 boincer umatlas      1043 Jun  4 09:49 memory_monitor_summary.json
[2025-06-04 09:50:12] -rw-------. 1 boincer umatlas    306026 Jun  4 09:49 log.45006595._055529.job.log.tgz.1
[2025-06-04 09:50:12] -rw-------. 1 boincer umatlas        95 Jun  4 09:49 pilot_heartbeat.json
[2025-06-04 09:50:12] -rw-------. 1 boincer umatlas      7706 Jun  4 09:49 heartbeat.json
[2025-06-04 09:50:12] -rw-r--r--. 1 boincer umatlas      6929 Jun  4 09:49 init_data.xml
[2025-06-04 09:50:12] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:50 boinc_mmap_file
[2025-06-04 09:50:12] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:50 wrapper_checkpoint.txt
[2025-06-04 09:50:12] -rw-------. 1 boincer umatlas      4662 Jun  4 09:50 pilotlog.txt
[2025-06-04 09:50:12] -rw-------. 1 boincer umatlas    540810 Jun  4 09:50 log.45006595._055529.job.log.1
[2025-06-04 09:50:12] -rw-------. 1 boincer umatlas       357 Jun  4 09:50 output.list
[2025-06-04 09:50:12] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:50 runtime_log
[2025-06-04 09:50:12] -rw-------. 1 boincer umatlas    870400 Jun  4 09:50 result.tar.gz
[2025-06-04 09:50:12] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 09:50 runtime_log.err
[2025-06-04 09:50:12] -rw-------. 1 boincer umatlas       655 Jun  4 09:50 6yyNDm76xg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmElnKDmGqDBKn.diag
[2025-06-04 09:50:12] -rw-r--r--. 1 boincer umatlas     15750 Jun  4 09:50 stderr.txt
[2025-06-04 09:50:12] HITS file was successfully produced:
[2025-06-04 09:50:12] -rw-------. 1 boincer umatlas 176150882 Jun  4 09:48 shared/HITS.pool.root.1
[2025-06-04 09:50:12]  *** Contents of shared directory: ***
[2025-06-04 09:50:12] total 384328
[2025-06-04 09:50:12] -rw-r--r--. 2 boincer umatlas 215987960 Jun  4 08:13 ATLAS.root_0
[2025-06-04 09:50:12] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 08:13 input.tar.gz
[2025-06-04 09:50:12] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:13 start_atlas.sh
[2025-06-04 09:50:12] -rw-------. 1 boincer umatlas 176150882 Jun  4 09:48 HITS.pool.root.1
[2025-06-04 09:50:12] -rw-------. 1 boincer umatlas    870400 Jun  4 09:50 result.tar.gz
09:50:14 (294231): run_atlas exited; CPU time 26697.815536
09:50:14 (294231): called boinc_finish(0)

</stderr_txt>
]]>

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