Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:18:08 (1603564): wrapper (7.7.26015): starting
22:18:08 (1603564): wrapper: running run_atlas (--nthreads 2)
[2025-06-04 22:18:08] Arguments: --nthreads 2
[2025-06-04 22:18:08] Threads: 2
[2025-06-04 22:18:08] Checking for CVMFS
[2025-06-04 22:18:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:18:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:18:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:18:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:18:09] 2.9.2.0 906415 2928 57808 146793 4 1 30110060 36864001 0 130560 0 1894529 99.990 684198 57791 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 22:18:09] CVMFS is ok
[2025-06-04 22:18:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:18:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:18:09] Further information can be found at the LHC@home message board.
[2025-06-04 22:18:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:18:09] Checking for apptainer binary...
[2025-06-04 22:18:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:18:09] Running /usr/bin/apptainer --version
[2025-06-04 22:18:09] apptainer version 1.3.6-6.1
[2025-06-04 22:18:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:18:09] madmaxA275
[2025-06-04 22:18:09] apptainer works
[2025-06-04 22:18:09] Set ATHENA_PROC_NUMBER=2
[2025-06-04 22:18:09] Set ATHENA_CORE_NUMBER=2
[2025-06-04 22:18:09] Starting ATLAS job with PandaID=6678363341
[2025-06-04 22:18:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:11:06]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:11:06] 2025-06-04 22:10:41,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:11:06] 2025-06-04 22:10:42,423 | INFO     | PID=1607187 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 00:11:06] 2025-06-04 22:10:44,239 | INFO     | monitor loop #521: job 0:6678363341 is in state 'finished'
[2025-06-05 00:11:06] 2025-06-04 22:10:44,239 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:11:06] 2025-06-04 22:10:46,743 | INFO     | monitor loop #522: job 0:6678363341 is in state 'finished'
[2025-06-05 00:11:06] 2025-06-04 22:10:46,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:11:06] 2025-06-04 22:10:46,921 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 00:11:06] 2025-06-04 22:10:46,921 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678363341/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 00:11:06] 2025-06-04 22:10:46,921 | INFO     | extracted standard info from prmon json
[2025-06-05 00:11:06] 2025-06-04 22:10:46,921 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 00:11:06] 2025-06-04 22:10:46,921 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:11:06] 2025-06-04 22:10:46,921 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:11:06] 2025-06-04 22:10:46,921 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:11:06] 2025-06-04 22:10:46,922 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:11:06] 2025-06-04 22:10:46,922 | INFO     | sum of square deviations: 412686807.5
[2025-06-05 00:11:06] 2025-06-04 22:10:46,922 | INFO     | sum of deviations: -8428241808.499998
[2025-06-05 00:11:06] 2025-06-04 22:10:46,922 | INFO     | mean x: 1749071658.5
[2025-06-05 00:11:06] 2025-06-04 22:10:46,922 | INFO     | mean y: 2387172.4454545453
[2025-06-05 00:11:06] 2025-06-04 22:10:46,922 | INFO     | -- intersect: 35723419709.28547
[2025-06-05 00:11:06] 2025-06-04 22:10:46,922 | INFO     | intersect: 35723419709.28547
[2025-06-05 00:11:06] 2025-06-04 22:10:46,922 | INFO     | chi2: 1.571190876964912
[2025-06-05 00:11:06] 2025-06-04 22:10:46,923 | INFO     | sum of square deviations: 358927660.0
[2025-06-05 00:11:06] 2025-06-04 22:10:46,923 | INFO     | sum of deviations: -7219284180.999997
[2025-06-05 00:11:06] 2025-06-04 22:10:46,923 | INFO     | mean x: 1749071506.0
[2025-06-05 00:11:06] 2025-06-04 22:10:46,923 | INFO     | mean y: 2390604.1714285715
[2025-06-05 00:11:06] 2025-06-04 22:10:46,923 | INFO     | -- intersect: 35182304725.87395
[2025-06-05 00:11:06] 2025-06-04 22:10:46,923 | INFO     | intersect: 35182304725.87395
[2025-06-05 00:11:06] 2025-06-04 22:10:46,923 | INFO     | chi2: 1.5719282161490677
[2025-06-05 00:11:06] 2025-06-04 22:10:46,923 | INFO     | current chi2=1.5719282161490677 (change=-0.046928682884155075 %)
[2025-06-05 00:11:06] 2025-06-04 22:10:46,923 | INFO     | right removable region: 104
[2025-06-05 00:11:06] 2025-06-04 22:10:46,923 | INFO     | sum of square deviations: 358927660.0
[2025-06-05 00:11:06] 2025-06-04 22:10:46,923 | INFO     | sum of deviations: -22027586536.0
[2025-06-05 00:11:06] 2025-06-04 22:10:46,923 | INFO     | mean x: 1749071811.0
[2025-06-05 00:11:06] 2025-06-04 22:10:46,923 | INFO     | mean y: 2424661.714285714
[2025-06-05 00:11:06] 2025-06-04 22:10:46,923 | INFO     | -- intersect: 107343917023.93773
[2025-06-05 00:11:06] 2025-06-04 22:10:46,923 | INFO     | intersect: 107343917023.93773
[2025-06-05 00:11:06] 2025-06-04 22:10:46,923 | INFO     | chi2: 0.07432971722876697
[2025-06-05 00:11:06] 2025-06-04 22:10:46,924 | INFO     | current chi2=0.07432971722876697 (change=95.26921150583878 %)
[2025-06-05 00:11:06] 2025-06-04 22:10:46,924 | INFO     | sum of square deviations: 310052325.0
[2025-06-05 00:11:06] 2025-06-04 22:10:46,924 | INFO     | sum of deviations: -17921773648.0
[2025-06-05 00:11:06] 2025-06-04 22:10:46,924 | INFO     | mean x: 1749071963.5
[2025-06-05 00:11:06] 2025-06-04 22:10:46,924 | INFO     | mean y: 2411831.08
[2025-06-05 00:11:06] 2025-06-04 22:10:46,924 | INFO     | -- intersect: 101102998075.38544
[2025-06-05 00:11:06] 2025-06-04 22:10:46,924 | INFO     | intersect: 101102998075.38544
[2025-06-05 00:11:06] 2025-06-04 22:10:46,924 | INFO     | chi2: 0.06958901733519755
[2025-06-05 00:11:06] 2025-06-04 22:10:46,924 | INFO     | current chi2=0.06958901733519755 (change=6.377933443468928 %)
[2025-06-05 00:11:06] 2025-06-04 22:10:46,924 | INFO     | left removable region: 20
[2025-06-05 00:11:06] 2025-06-04 22:10:46,924 | INFO     | sum of square deviations: 183761585.0
[2025-06-05 00:11:06] 2025-06-04 22:10:46,924 | INFO     | sum of deviations: -11687350723.5
[2025-06-05 00:11:06] 2025-06-04 22:10:46,924 | INFO     | mean x: 1749072085.5
[2025-06-05 00:11:06] 2025-06-04 22:10:46,924 | INFO     | mean y: 2399879.654761905
[2025-06-05 00:11:06] 2025-06-04 22:10:46,924 | INFO     | -- intersect: 111244468802.39548
[2025-06-05 00:11:06] 2025-06-04 22:10:46,924 | INFO     | intersect: 111244468802.39548
[2025-06-05 00:11:06] 2025-06-04 22:10:46,924 | INFO     | chi2: 0.0575099974973076
[2025-06-05 00:11:06] 2025-06-04 22:10:46,924 | INFO     | -- intersect: 111244468802.39548
[2025-06-05 00:11:06] 2025-06-04 22:10:46,925 | INFO     | current memory leak: -63.60 B/s (using 84 data points, chi2=0.06)
[2025-06-05 00:11:06] 2025-06-04 22:10:46,925 | INFO     | ..............................
[2025-06-05 00:11:06] 2025-06-04 22:10:46,925 | INFO     | . Timing measurements:
[2025-06-05 00:11:06] 2025-06-04 22:10:46,925 | INFO     | . get job = 0 s
[2025-06-05 00:11:06] 2025-06-04 22:10:46,925 | INFO     | . initial setup = 1 s
[2025-06-05 00:11:06] 2025-06-04 22:10:46,925 | INFO     | . payload setup = 9 s
[2025-06-05 00:11:06] 2025-06-04 22:10:46,925 | INFO     | . stage-in = 0 s
[2025-06-05 00:11:06] 2025-06-04 22:10:46,925 | INFO     | . payload execution = 6698 s
[2025-06-05 00:11:06] 2025-06-04 22:10:46,925 | INFO     | . stage-out = 0 s
[2025-06-05 00:11:06] 2025-06-04 22:10:46,925 | INFO     | . log creation = 0 s
[2025-06-05 00:11:06] 2025-06-04 22:10:46,925 | INFO     | ..............................
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | 
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | job summary report
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | --------------------------------------------------
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | PanDA job id: 6678363341
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | task id: 45006595
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | errors: (none)
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | pilot state: finished 
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | transexitcode: 0
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | exeerrorcode: 0
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | exeerrordiag: 
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | exitcode: 0
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | exitmsg: OK
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | cpuconsumptiontime: 13053 s
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | nevents: 400
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | neventsw: 0
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | pid: 1613649
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | pgrp: 1613649
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | corecount: 2
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | event service: False
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | sizes: {0: 2397345, 7: 2397551, 11: 2397579, 6711: 2424677, 6712: 2424676, 6713: 2433679, 6715: 2433863, 6725: 2434033}
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | --------------------------------------------------
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | 
[2025-06-05 00:11:06] 2025-06-04 22:10:46,995 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 00:11:06] 2025-06-04 22:10:47,006 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:11:06] 2025-06-04 22:10:47,006 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | job 6678363341 has completed (purged errors)
[2025-06-05 00:11:06] 2025-06-04 22:10:47,007 | INFO     | overall cleanup function is called
[2025-06-05 00:11:06] 2025-06-04 22:10:48,013 | INFO     | --- collectZombieJob: --- 10, [1613649]
[2025-06-05 00:11:06] 2025-06-04 22:10:48,014 | INFO     | zombie collector waiting for pid 1613649
[2025-06-05 00:11:06] 2025-06-04 22:10:48,014 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:11:06] 2025-06-04 22:10:48,014 | INFO     | collected zombie processes
[2025-06-05 00:11:06] 2025-06-04 22:10:48,014 | INFO     | will attempt to kill all subprocesses of pid=1613649
[2025-06-05 00:11:06] 2025-06-04 22:10:48,047 | INFO     | process IDs to be killed: [1613649] (in reverse order)
[2025-06-05 00:11:06] 2025-06-04 22:10:48,068 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:11:06] 2025-06-04 22:10:48,068 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:11:06] 2025-06-04 22:10:48,069 | INFO     | did not find any defunct processes belonging to 1613649
[2025-06-05 00:11:06] 2025-06-04 22:10:48,070 | INFO     | did not find any defunct processes belonging to 1613649
[2025-06-05 00:11:06] 2025-06-04 22:10:48,070 | INFO     | ready for new job
[2025-06-05 00:11:06] 2025-06-04 22:10:48,070 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:11:06] 2025-06-04 22:10:48,070 | INFO     | **************************************
[2025-06-05 00:11:06] 2025-06-04 22:10:48,070 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:11:06] 2025-06-04 22:10:48,070 | INFO     | **************************************
[2025-06-05 00:11:06] 2025-06-04 22:10:48,070 | INFO     | 
[2025-06-05 00:11:06] 2025-06-04 22:10:48,071 | INFO     | architecture information:
[2025-06-05 00:11:06] 2025-06-04 22:10:48,071 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:11:06] 2025-06-04 22:10:48,079 | INFO     | cat /etc/os-release:
[2025-06-05 00:11:06] NAME="CentOS Linux"
[2025-06-05 00:11:06] VERSION="7 (Core)"
[2025-06-05 00:11:06] ID="centos"
[2025-06-05 00:11:06] ID_LIKE="rhel fedora"
[2025-06-05 00:11:06] VERSION_ID="7"
[2025-06-05 00:11:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:11:06] ANSI_COLOR="0;31"
[2025-06-05 00:11:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:11:06] HOME_URL="https://www.centos.org/"
[2025-06-05 00:11:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:11:06] 
[2025-06-05 00:11:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:11:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:11:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:11:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:11:06] 
[2025-06-05 00:11:06] 2025-06-04 22:10:48,079 | INFO     | **************************************
[2025-06-05 00:11:06] 2025-06-04 22:10:48,582 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 00:11:06] 2025-06-04 22:10:48,592 | INFO     | sufficient remaining disk space (250446086144 B)
[2025-06-05 00:11:06] 2025-06-04 22:10:48,593 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:11:06] 2025-06-04 22:10:48,593 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:11:06] 2025-06-04 22:10:48,593 | INFO     | update_server=False
[2025-06-05 00:11:06] 2025-06-04 22:10:48,593 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:11:06] 2025-06-04 22:10:48,593 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:11:06] 2025-06-04 22:10:48,593 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 00:11:06] 2025-06-04 22:10:48,593 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:11:06] 2025-06-04 22:10:48,593 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:11:06] 2025-06-04 22:10:48,594 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:11:06] 2025-06-04 22:10:48,594 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:11:06] 2025-06-04 22:10:48,594 | INFO     | aborting loop
[2025-06-05 00:11:06] 2025-06-04 22:10:48,594 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:11:06] 2025-06-04 22:10:48,634 | INFO     | all payload control threads have been joined
[2025-06-05 00:11:06] 2025-06-04 22:10:48,813 | INFO     | all data control threads have been joined
[2025-06-05 00:11:06] 2025-06-04 22:10:49,599 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:11:06] 2025-06-04 22:10:49,599 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:11:06] 2025-06-04 22:10:49,600 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:11:06] 2025-06-04 22:10:49,640 | INFO     | [payload] control thread has finished
[2025-06-05 00:11:06] 2025-06-04 22:10:49,773 | INFO     | all job control threads have been joined
[2025-06-05 00:11:06] 2025-06-04 22:10:49,819 | INFO     | [data] control thread has finished
[2025-06-05 00:11:06] 2025-06-04 22:10:49,869 | INFO     | [job] validate thread has finished
[2025-06-05 00:11:06] 2025-06-04 22:10:50,072 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:11:06] 2025-06-04 22:10:50,118 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:11:06] 2025-06-04 22:10:50,570 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:11:06] 2025-06-04 22:10:50,594 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:11:06] 2025-06-04 22:10:50,615 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:11:06] 2025-06-04 22:10:50,779 | INFO     | [job] control thread has finished
[2025-06-05 00:11:06] 2025-06-04 22:10:50,887 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:11:06] 2025-06-04 22:10:50,973 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:11:06] 2025-06-04 22:10:52,078 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:11:06] 2025-06-04 22:10:52,600 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:11:06] 2025-06-04 22:10:58,681 | INFO     | job.realtimelogging is not enabled
[2025-06-05 00:11:06] 2025-06-04 22:10:59,686 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:11:06] 2025-06-04 22:11:01,262 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139871143864128)>', '<ExcThread(monitor, started 139870854936320)>']
[2025-06-05 00:11:06] 2025-06-04 22:11:01,658 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:11:06] 2025-06-04 22:11:01,659 | INFO     | [monitor] control thread has ended
[2025-06-05 00:11:06] 2025-06-04 22:11:06,288 | INFO     | all workflow threads have been joined
[2025-06-05 00:11:06] 2025-06-04 22:11:06,289 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:11:06] 2025-06-04 22:11:06,289 | INFO     | traces error code: 0
[2025-06-05 00:11:06] 2025-06-04 22:11:06,290 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:11:06] 2025-06-04 22:11:06,333 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:11:06] 2025-06-04 22:11:06,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:11:06] 2025-06-04 22:11:06,338 [wrapper] pilotpid: 1607187
[2025-06-05 00:11:06] 2025-06-04 22:11:06,341 [wrapper] Pilot exit status: 0
[2025-06-05 00:11:06] 2025-06-04 22:11:06,347 [wrapper] pandaids: 6678363341
[2025-06-05 00:11:06] 2025-06-04 22:11:06,360 [wrapper] cleanup supervisor_pilot 1627959 1607188
[2025-06-05 00:11:06] 2025-06-04 22:11:06,362 [wrapper] Test setup, not cleaning
[2025-06-05 00:11:06] 2025-06-04 22:11:06,364 [wrapper] apfmon messages muted
[2025-06-05 00:11:06] 2025-06-04 22:11:06,366 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:11:06] 2025-06-04 22:11:06,368 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:11:06]  *** Error codes and diagnostics ***
[2025-06-05 00:11:06]     "exeErrorCode": 0,
[2025-06-05 00:11:06]     "exeErrorDiag": "",
[2025-06-05 00:11:06]     "pilotErrorCode": 0,
[2025-06-05 00:11:06]     "pilotErrorDiag": "",
[2025-06-05 00:11:06]  *** Listing of results directory ***
[2025-06-05 00:11:06] total 390860
[2025-06-05 00:11:06] -rw-r--r-- 1 boinc boinc    495897 Jun  4 06:58 pilot3.tar.gz
[2025-06-05 00:11:06] -rw-r--r-- 1 boinc boinc      5111 Jun  4 07:22 queuedata.json
[2025-06-05 00:11:06] -rwx------ 1 boinc boinc     37140 Jun  4 07:23 runpilot2-wrapper.sh
[2025-06-05 00:11:06] -rw-r--r-- 1 boinc boinc       100 Jun  4 22:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:11:06] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 22:18 run_atlas
[2025-06-05 00:11:06] -rw-r--r-- 1 boinc boinc       105 Jun  4 22:18 job.xml
[2025-06-05 00:11:06] -rw-r--r-- 2 boinc boinc 213605122 Jun  4 22:18 EVNT.45006593._002136.pool.root.1
[2025-06-05 00:11:06] -rw-r--r-- 1 boinc boinc      6692 Jun  4 22:18 init_data.xml
[2025-06-05 00:11:06] drwxrwx--x 2 boinc boinc      4096 Jun  4 22:18 shared
[2025-06-05 00:11:06] -rw-r--r-- 2 boinc boinc    508880 Jun  4 22:18 input.tar.gz
[2025-06-05 00:11:06] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:18 start_atlas.sh
[2025-06-05 00:11:06] -rw-r--r-- 1 boinc boinc         0 Jun  4 22:18 boinc_lockfile
[2025-06-05 00:11:06] -rw-r--r-- 1 boinc boinc      2525 Jun  4 22:18 pandaJob.out
[2025-06-05 00:11:06] -rw------- 1 boinc boinc    987032 Jun  4 22:18 agis_schedconf.cvmfs.json
[2025-06-05 00:11:06] -rw------- 1 boinc boinc   1598969 Jun  4 22:18 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:11:06] drwx------ 4 boinc boinc      4096 Jun  4 22:18 pilot3
[2025-06-05 00:11:06] -rw------- 1 boinc boinc        95 Jun  5 00:09 pilot_heartbeat.json
[2025-06-05 00:11:06] -rw------- 1 boinc boinc 181036890 Jun  5 00:10 HITS.45006595._053381.pool.root.1
[2025-06-05 00:11:06] -rw-r--r-- 1 boinc boinc       529 Jun  5 00:10 boinc_task_state.xml
[2025-06-05 00:11:06] -rw------- 1 boinc boinc      1014 Jun  5 00:10 memory_monitor_summary.json
[2025-06-05 00:11:06] -rw------- 1 boinc boinc    243380 Jun  5 00:10 log.45006595._053381.job.log.tgz.1
[2025-06-05 00:11:06] -rw------- 1 boinc boinc      7658 Jun  5 00:10 heartbeat.json
[2025-06-05 00:11:06] -rw-r--r-- 1 boinc boinc      8192 Jun  5 00:11 boinc_mmap_file
[2025-06-05 00:11:06] -rw-r--r-- 1 boinc boinc        27 Jun  5 00:11 wrapper_checkpoint.txt
[2025-06-05 00:11:06] -rw------- 1 boinc boinc      4552 Jun  5 00:11 pilotlog.txt
[2025-06-05 00:11:06] -rw------- 1 boinc boinc    639707 Jun  5 00:11 log.45006595._053381.job.log.1
[2025-06-05 00:11:06] -rw------- 1 boinc boinc       357 Jun  5 00:11 output.list
[2025-06-05 00:11:06] -rw-r--r-- 1 boinc boinc       620 Jun  5 00:11 runtime_log
[2025-06-05 00:11:06] -rw------- 1 boinc boinc    901120 Jun  5 00:11 result.tar.gz
[2025-06-05 00:11:06] -rw-r--r-- 1 boinc boinc      8753 Jun  5 00:11 runtime_log.err
[2025-06-05 00:11:06] -rw------- 1 boinc boinc       663 Jun  5 00:11 JTRLDmnlvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9NnKDmzqQLnm.diag
[2025-06-05 00:11:06] -rw-r--r-- 1 boinc boinc     21162 Jun  5 00:11 stderr.txt
[2025-06-05 00:11:06] HITS file was successfully produced:
[2025-06-05 00:11:06] -rw------- 1 boinc boinc 181036890 Jun  5 00:10 shared/HITS.pool.root.1
[2025-06-05 00:11:06]  *** Contents of shared directory: ***
[2025-06-05 00:11:06] total 386800
[2025-06-05 00:11:06] -rw-r--r-- 2 boinc boinc 213605122 Jun  4 22:18 ATLAS.root_0
[2025-06-05 00:11:06] -rw-r--r-- 2 boinc boinc    508880 Jun  4 22:18 input.tar.gz
[2025-06-05 00:11:06] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:18 start_atlas.sh
[2025-06-05 00:11:06] -rw------- 1 boinc boinc 181036890 Jun  5 00:10 HITS.pool.root.1
[2025-06-05 00:11:06] -rw------- 1 boinc boinc    901120 Jun  5 00:11 result.tar.gz
00:11:08 (1603564): run_atlas exited; CPU time 13080.660811
00:11:08 (1603564): called boinc_finish(0)

</stderr_txt>
]]>

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