Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:23:46 (2501194): wrapper (7.7.26015): starting
21:23:46 (2501194): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 21:23:46] Arguments: --nthreads 12
[2025-06-04 21:23:46] Threads: 12
[2025-06-04 21:23:46] Checking for CVMFS
[2025-06-04 21:23:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:23:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:23:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:23:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:23:47] 2.12.7.0 9267 7943 168612 146792 3 259 32672117 46080000 39621 130560 0 57014623 99.950 10413795 29692 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-06-04 21:23:47] CVMFS is ok
[2025-06-04 21:23:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 21:23:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 21:23:47] Further information can be found at the LHC@home message board.
[2025-06-04 21:23:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:23:47] Checking for apptainer binary...
[2025-06-04 21:23:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:23:47] Running /usr/bin/apptainer --version
[2025-06-04 21:23:47] apptainer version 1.4.1-1.el9
[2025-06-04 21:23:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:23:48] mff2103.farm.particle.cz
[2025-06-04 21:23:48] apptainer works
[2025-06-04 21:23:48] Set ATHENA_PROC_NUMBER=12
[2025-06-04 21:23:48] Set ATHENA_CORE_NUMBER=12
[2025-06-04 21:23:48] Starting ATLAS job with PandaID=6678312741
[2025-06-04 21:23:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:22:48]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:22:48] 2025-06-04 21:22:03,014 | INFO     | monitor loop #477: job 0:6678312741 is in state 'finished'
[2025-06-04 23:22:48] 2025-06-04 21:22:03,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:22:48] 2025-06-04 21:22:05,519 | INFO     | monitor loop #478: job 0:6678312741 is in state 'finished'
[2025-06-04 23:22:48] 2025-06-04 21:22:05,520 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:22:48] 2025-06-04 21:22:08,028 | INFO     | monitor loop #479: job 0:6678312741 is in state 'finished'
[2025-06-04 23:22:48] 2025-06-04 21:22:08,029 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:22:48] 2025-06-04 21:22:08,340 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 23:22:48] 2025-06-04 21:22:08,340 | INFO     | using path: /scratch/.boinc/slots/4/PanDA_Pilot-6678312741/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 23:22:48] 2025-06-04 21:22:08,341 | INFO     | extracted standard info from prmon json
[2025-06-04 23:22:48] 2025-06-04 21:22:08,341 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 23:22:48] 2025-06-04 21:22:08,341 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 23:22:48] 2025-06-04 21:22:08,342 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 23:22:48] 2025-06-04 21:22:08,342 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:22:48] 2025-06-04 21:22:08,344 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:22:48] 2025-06-04 21:22:08,344 | INFO     | sum of square deviations: 435610162.25
[2025-06-04 23:22:48] 2025-06-04 21:22:08,345 | INFO     | sum of deviations: 31698328374.000008
[2025-06-04 23:22:48] 2025-06-04 21:22:08,345 | INFO     | mean x: 1749068663.625
[2025-06-04 23:22:48] 2025-06-04 21:22:08,345 | INFO     | mean y: 2554267.4285714286
[2025-06-04 23:22:48] 2025-06-04 21:22:08,345 | INFO     | -- intersect: -127273064285.38127
[2025-06-04 23:22:48] 2025-06-04 21:22:08,345 | INFO     | intersect: -127273064285.38127
[2025-06-04 23:22:48] 2025-06-04 21:22:08,346 | INFO     | chi2: 4.574253086231192
[2025-06-04 23:22:48] 2025-06-04 21:22:08,346 | INFO     | sum of square deviations: 379836642.1682245
[2025-06-04 23:22:48] 2025-06-04 21:22:08,346 | INFO     | sum of deviations: 37582777941.00934
[2025-06-04 23:22:48] 2025-06-04 21:22:08,347 | INFO     | mean x: 1749068511.130841
[2025-06-04 23:22:48] 2025-06-04 21:22:08,347 | INFO     | mean y: 2569611.785046729
[2025-06-04 23:22:48] 2025-06-04 21:22:08,347 | INFO     | -- intersect: -173058283817.75098
[2025-06-04 23:22:48] 2025-06-04 21:22:08,347 | INFO     | intersect: -173058283817.75098
[2025-06-04 23:22:48] 2025-06-04 21:22:08,347 | INFO     | chi2: 3.914139867172656
[2025-06-04 23:22:48] 2025-06-04 21:22:08,347 | INFO     | current chi2=3.914139867172656 (change=14.431060254307326 %)
[2025-06-04 23:22:48] 2025-06-04 21:22:08,347 | INFO     | right removable region: 106
[2025-06-04 23:22:48] 2025-06-04 21:22:08,347 | INFO     | sum of square deviations: 379828102.1682245
[2025-06-04 23:22:48] 2025-06-04 21:22:08,348 | INFO     | sum of deviations: -3391261335.532708
[2025-06-04 23:22:48] 2025-06-04 21:22:08,348 | INFO     | mean x: 1749068816.130841
[2025-06-04 23:22:48] 2025-06-04 21:22:08,348 | INFO     | mean y: 2649800.2523364485
[2025-06-04 23:22:48] 2025-06-04 21:22:08,348 | INFO     | -- intersect: 15619054735.723454
[2025-06-04 23:22:48] 2025-06-04 21:22:08,348 | INFO     | intersect: 15619054735.723454
[2025-06-04 23:22:48] 2025-06-04 21:22:08,348 | INFO     | chi2: 0.9047065852844435
[2025-06-04 23:22:48] 2025-06-04 21:22:08,349 | INFO     | current chi2=0.9047065852844435 (change=80.22176367967765 %)
[2025-06-04 23:22:48] 2025-06-04 21:22:08,349 | INFO     | sum of square deviations: 329029161.8431383
[2025-06-04 23:22:48] 2025-06-04 21:22:08,349 | INFO     | sum of deviations: -8792800372.980392
[2025-06-04 23:22:48] 2025-06-04 21:22:08,349 | INFO     | mean x: 1749068968.627451
[2025-06-04 23:22:48] 2025-06-04 21:22:08,349 | INFO     | mean y: 2665604.9215686275
[2025-06-04 23:22:48] 2025-06-04 21:22:08,349 | INFO     | -- intersect: 46743854724.95399
[2025-06-04 23:22:48] 2025-06-04 21:22:08,350 | INFO     | intersect: 46743854724.95399
[2025-06-04 23:22:48] 2025-06-04 21:22:08,350 | INFO     | chi2: 0.7365016608487897
[2025-06-04 23:22:48] 2025-06-04 21:22:08,350 | INFO     | current chi2=0.7365016608487897 (change=18.592207371052737 %)
[2025-06-04 23:22:48] 2025-06-04 21:22:08,350 | INFO     | left removable region: 20
[2025-06-04 23:22:48] 2025-06-04 21:22:08,350 | INFO     | sum of square deviations: 197203829.8255817
[2025-06-04 23:22:48] 2025-06-04 21:22:08,355 | INFO     | sum of deviations: -1897916294.1627905
[2025-06-04 23:22:48] 2025-06-04 21:22:08,355 | INFO     | mean x: 1749069090.639535
[2025-06-04 23:22:48] 2025-06-04 21:22:08,355 | INFO     | mean y: 2689347.930232558
[2025-06-04 23:22:48] 2025-06-04 21:22:08,355 | INFO     | -- intersect: 16835966519.460318
[2025-06-04 23:22:48] 2025-06-04 21:22:08,355 | INFO     | intersect: 16835966519.460318
[2025-06-04 23:22:48] 2025-06-04 21:22:08,355 | INFO     | chi2: 0.0020587682737517148
[2025-06-04 23:22:48] 2025-06-04 21:22:08,355 | INFO     | -- intersect: 16835966519.460318
[2025-06-04 23:22:48] 2025-06-04 21:22:08,355 | INFO     | current memory leak: -9.62 B/s (using 86 data points, chi2=0.00)
[2025-06-04 23:22:48] 2025-06-04 21:22:08,356 | INFO     | ..............................
[2025-06-04 23:22:48] 2025-06-04 21:22:08,356 | INFO     | . Timing measurements:
[2025-06-04 23:22:48] 2025-06-04 21:22:08,356 | INFO     | . get job = 0 s
[2025-06-04 23:22:48] 2025-06-04 21:22:08,356 | INFO     | . initial setup = 3 s
[2025-06-04 23:22:48] 2025-06-04 21:22:08,356 | INFO     | . payload setup = 63 s
[2025-06-04 23:22:48] 2025-06-04 21:22:08,357 | INFO     | . stage-in = 0 s
[2025-06-04 23:22:48] 2025-06-04 21:22:08,357 | INFO     | . payload execution = 6840 s
[2025-06-04 23:22:48] 2025-06-04 21:22:08,357 | INFO     | . stage-out = 1 s
[2025-06-04 23:22:48] 2025-06-04 21:22:08,357 | INFO     | . log creation = 0 s
[2025-06-04 23:22:48] 2025-06-04 21:22:08,357 | INFO     | ..............................
[2025-06-04 23:22:48] 2025-06-04 21:22:08,700 | INFO     | 
[2025-06-04 23:22:48] 2025-06-04 21:22:08,701 | INFO     | job summary report
[2025-06-04 23:22:48] 2025-06-04 21:22:08,701 | INFO     | --------------------------------------------------
[2025-06-04 23:22:48] 2025-06-04 21:22:08,701 | INFO     | PanDA job id: 6678312741
[2025-06-04 23:22:48] 2025-06-04 21:22:08,701 | INFO     | task id: 45006595
[2025-06-04 23:22:48] 2025-06-04 21:22:08,701 | INFO     | errors: (none)
[2025-06-04 23:22:48] 2025-06-04 21:22:08,701 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:22:48] 2025-06-04 21:22:08,701 | INFO     | pilot state: finished 
[2025-06-04 23:22:48] 2025-06-04 21:22:08,701 | INFO     | transexitcode: 0
[2025-06-04 23:22:48] 2025-06-04 21:22:08,701 | INFO     | exeerrorcode: 0
[2025-06-04 23:22:48] 2025-06-04 21:22:08,702 | INFO     | exeerrordiag: 
[2025-06-04 23:22:48] 2025-06-04 21:22:08,702 | INFO     | exitcode: 0
[2025-06-04 23:22:48] 2025-06-04 21:22:08,702 | INFO     | exitmsg: OK
[2025-06-04 23:22:48] 2025-06-04 21:22:08,702 | INFO     | cpuconsumptiontime: 34412 s
[2025-06-04 23:22:48] 2025-06-04 21:22:08,702 | INFO     | nevents: 400
[2025-06-04 23:22:48] 2025-06-04 21:22:08,702 | INFO     | neventsw: 0
[2025-06-04 23:22:48] 2025-06-04 21:22:08,702 | INFO     | pid: 2611297
[2025-06-04 23:22:48] 2025-06-04 21:22:08,702 | INFO     | pgrp: 2611297
[2025-06-04 23:22:48] 2025-06-04 21:22:08,702 | INFO     | corecount: 12
[2025-06-04 23:22:48] 2025-06-04 21:22:08,702 | INFO     | event service: False
[2025-06-04 23:22:48] 2025-06-04 21:22:08,702 | INFO     | sizes: {0: 2396514, 1: 2397371, 2: 2397371, 12: 2397399, 23: 2397427, 34: 2397455, 35: 2397817, 44: 2397845, 6908: 2424889, 6909: 2424888, 6910: 2433887, 6911: 243
[2025-06-04 23:22:48] 2025-06-04 21:22:08,702 | INFO     | --------------------------------------------------
[2025-06-04 23:22:48] 2025-06-04 21:22:08,702 | INFO     | 
[2025-06-04 23:22:48] 2025-06-04 21:22:08,703 | INFO     | executing command: ls -lF /scratch/.boinc/slots/4
[2025-06-04 23:22:48] 2025-06-04 21:22:08,887 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:22:48] 2025-06-04 21:22:08,887 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:22:48] 2025-06-04 21:22:08,887 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:22:48] 2025-06-04 21:22:08,887 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:22:48] 2025-06-04 21:22:08,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:22:48] 2025-06-04 21:22:08,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:22:48] 2025-06-04 21:22:08,888 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:22:48] 2025-06-04 21:22:08,888 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:22:48] 2025-06-04 21:22:08,888 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:22:48] 2025-06-04 21:22:08,888 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:22:48] 2025-06-04 21:22:08,888 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:22:48] 2025-06-04 21:22:08,888 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:22:48] 2025-06-04 21:22:08,888 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:22:48] 2025-06-04 21:22:08,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:22:48] 2025-06-04 21:22:08,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:22:48] 2025-06-04 21:22:08,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:22:48] 2025-06-04 21:22:08,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:22:48] 2025-06-04 21:22:08,889 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:22:48] 2025-06-04 21:22:08,889 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:22:48] 2025-06-04 21:22:08,889 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:22:48] 2025-06-04 21:22:08,889 | INFO     | job 6678312741 has completed (purged errors)
[2025-06-04 23:22:48] 2025-06-04 21:22:08,889 | INFO     | overall cleanup function is called
[2025-06-04 23:22:48] 2025-06-04 21:22:09,909 | INFO     | --- collectZombieJob: --- 10, [2611297]
[2025-06-04 23:22:48] 2025-06-04 21:22:09,910 | INFO     | zombie collector waiting for pid 2611297
[2025-06-04 23:22:48] 2025-06-04 21:22:09,910 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:22:48] 2025-06-04 21:22:09,910 | INFO     | collected zombie processes
[2025-06-04 23:22:48] 2025-06-04 21:22:09,910 | INFO     | will attempt to kill all subprocesses of pid=2611297
[2025-06-04 23:22:48] 2025-06-04 21:22:10,978 | INFO     | process IDs to be killed: [2611297] (in reverse order)
[2025-06-04 23:22:48] 2025-06-04 21:22:11,496 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:22:48] 2025-06-04 21:22:11,496 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:22:48] 2025-06-04 21:22:11,549 | INFO     | did not find any defunct processes belonging to 2611297
[2025-06-04 23:22:48] 2025-06-04 21:22:11,614 | INFO     | did not find any defunct processes belonging to 2611297
[2025-06-04 23:22:48] 2025-06-04 21:22:11,614 | INFO     | ready for new job
[2025-06-04 23:22:48] 2025-06-04 21:22:11,614 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:22:48] 2025-06-04 21:22:11,616 | INFO     | **************************************
[2025-06-04 23:22:48] 2025-06-04 21:22:11,616 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:22:48] 2025-06-04 21:22:11,617 | INFO     | **************************************
[2025-06-04 23:22:48] 2025-06-04 21:22:11,617 | INFO     | 
[2025-06-04 23:22:48] 2025-06-04 21:22:11,623 | INFO     | architecture information:
[2025-06-04 23:22:48] 2025-06-04 21:22:11,634 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:22:48] 2025-06-04 21:22:11,769 | INFO     | cat /etc/os-release:
[2025-06-04 23:22:48] NAME="CentOS Linux"
[2025-06-04 23:22:48] VERSION="7 (Core)"
[2025-06-04 23:22:48] ID="centos"
[2025-06-04 23:22:48] ID_LIKE="rhel fedora"
[2025-06-04 23:22:48] VERSION_ID="7"
[2025-06-04 23:22:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:22:48] ANSI_COLOR="0;31"
[2025-06-04 23:22:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:22:48] HOME_URL="https://www.centos.org/"
[2025-06-04 23:22:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:22:48] 
[2025-06-04 23:22:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:22:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:22:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:22:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:22:48] 
[2025-06-04 23:22:48] 2025-06-04 21:22:11,769 | INFO     | **************************************
[2025-06-04 23:22:48] 2025-06-04 21:22:12,273 | INFO     | executing command: df -mP /scratch/.boinc/slots/4
[2025-06-04 23:22:48] 2025-06-04 21:22:12,425 | INFO     | sufficient remaining disk space (1676851281920 B)
[2025-06-04 23:22:48] 2025-06-04 21:22:12,425 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:22:48] 2025-06-04 21:22:12,425 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:22:48] 2025-06-04 21:22:12,425 | INFO     | update_server=False
[2025-06-04 23:22:48] 2025-06-04 21:22:12,425 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:22:48] 2025-06-04 21:22:12,426 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 23:22:48] 2025-06-04 21:22:12,427 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:22:48] 2025-06-04 21:22:12,427 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:22:48] 2025-06-04 21:22:12,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:22:48] 2025-06-04 21:22:12,430 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:22:48] 2025-06-04 21:22:12,431 | INFO     | aborting loop
[2025-06-04 23:22:48] 2025-06-04 21:22:12,839 | INFO     | all data control threads have been joined
[2025-06-04 23:22:48] 2025-06-04 21:22:13,044 | INFO     | all job control threads have been joined
[2025-06-04 23:22:48] 2025-06-04 21:22:13,090 | INFO     | all payload control threads have been joined
[2025-06-04 23:22:48] 2025-06-04 21:22:13,291 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:22:48] 2025-06-04 21:22:13,430 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:22:48] 2025-06-04 21:22:13,436 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:22:48] 2025-06-04 21:22:13,508 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:22:48] 2025-06-04 21:22:13,531 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:22:48] 2025-06-04 21:22:13,783 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:22:48] 2025-06-04 21:22:13,845 | INFO     | [data] control thread has finished
[2025-06-04 23:22:48] 2025-06-04 21:22:14,050 | INFO     | [job] control thread has finished
[2025-06-04 23:22:48] 2025-06-04 21:22:14,096 | INFO     | [payload] control thread has finished
[2025-06-04 23:22:48] 2025-06-04 21:22:14,272 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:22:48] 2025-06-04 21:22:14,400 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:22:48] 2025-06-04 21:22:14,514 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:22:48] 2025-06-04 21:22:14,728 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:22:48] 2025-06-04 21:22:14,852 | INFO     | [job] validate thread has finished
[2025-06-04 23:22:48] 2025-06-04 21:22:14,860 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:22:48] 2025-06-04 21:22:14,874 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:22:48] 2025-06-04 21:22:15,300 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:22:48] 2025-06-04 21:22:18,281 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:22:48] 2025-06-04 21:22:23,290 | INFO     | job.realtimelogging is not enabled
[2025-06-04 23:22:48] 2025-06-04 21:22:24,296 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:22:48] 2025-06-04 21:22:25,394 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139699980572480)>', '<ExcThread(monitor, started 139699465197312)>']
[2025-06-04 23:22:48] 2025-06-04 21:22:25,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:22:48] 2025-06-04 21:22:25,507 | INFO     | [monitor] control thread has ended
[2025-06-04 23:22:48] 2025-06-04 21:22:30,420 | INFO     | all workflow threads have been joined
[2025-06-04 23:22:48] 2025-06-04 21:22:30,421 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:22:48] 2025-06-04 21:22:30,421 | INFO     | traces error code: 0
[2025-06-04 23:22:48] 2025-06-04 21:22:30,421 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:22:48] 2025-06-04 21:22:30,776 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:22:48] 2025-06-04 21:22:30,817 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:22:48] 2025-06-04 21:22:30,858 [wrapper] pilotpid: 2530413
[2025-06-04 23:22:48] 2025-06-04 21:22:30,885 [wrapper] Pilot exit status: 0
[2025-06-04 23:22:48] 2025-06-04 21:22:31,043 [wrapper] pandaids: 6678312741
[2025-06-04 23:22:48] 2025-06-04 21:22:31,479 [wrapper] cleanup supervisor_pilot 3491310 2530414
[2025-06-04 23:22:48] 2025-06-04 21:22:31,506 [wrapper] Test setup, not cleaning
[2025-06-04 23:22:48] 2025-06-04 21:22:31,536 [wrapper] apfmon messages muted
[2025-06-04 23:22:48] 2025-06-04 21:22:31,585 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:22:48] 2025-06-04 21:22:31,625 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:22:48]  *** Error codes and diagnostics ***
[2025-06-04 23:22:48]     "exeErrorCode": 0,
[2025-06-04 23:22:48]     "exeErrorDiag": "",
[2025-06-04 23:22:48]     "pilotErrorCode": 0,
[2025-06-04 23:22:48]     "pilotErrorDiag": "",
[2025-06-04 23:22:48]  *** Listing of results directory ***
[2025-06-04 23:22:48] total 387376
[2025-06-04 23:22:48] -rw-r--r-- 1 boinc boinc    495897 Jun  4 06:04 pilot3.tar.gz
[2025-06-04 23:22:48] -rwx------ 1 boinc boinc     37140 Jun  4 06:15 runpilot2-wrapper.sh
[2025-06-04 23:22:48] -rw-r--r-- 1 boinc boinc      5111 Jun  4 06:15 queuedata.json
[2025-06-04 23:22:48] -rw-r--r-- 1 boinc boinc       100 Jun  4 21:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:22:48] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 21:23 run_atlas
[2025-06-04 23:22:48] -rw-r--r-- 1 boinc boinc       105 Jun  4 21:23 job.xml
[2025-06-04 23:22:48] -rw-r--r-- 1 boinc boinc      6664 Jun  4 21:23 init_data.xml
[2025-06-04 23:22:48] -rw-r--r-- 2 boinc boinc 215159456 Jun  4 21:23 EVNT.45006593._002090.pool.root.1
[2025-06-04 23:22:48] -rw-r--r-- 2 boinc boinc     15093 Jun  4 21:23 start_atlas.sh
[2025-06-04 23:22:48] drwxrwx--x 2 boinc boinc      4096 Jun  4 21:23 shared
[2025-06-04 23:22:48] -rw-r--r-- 2 boinc boinc    508880 Jun  4 21:23 input.tar.gz
[2025-06-04 23:22:48] -rw-r--r-- 1 boinc boinc         0 Jun  4 21:23 boinc_lockfile
[2025-06-04 23:22:48] -rw-r--r-- 1 boinc boinc      2525 Jun  4 21:23 pandaJob.out
[2025-06-04 23:22:48] -rw------- 1 boinc boinc    991007 Jun  4 21:24 agis_schedconf.cvmfs.json
[2025-06-04 23:22:48] -rw------- 1 boinc boinc   1598969 Jun  4 21:24 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:22:48] drwx------ 4 boinc boinc      4096 Jun  4 21:24 pilot3
[2025-06-04 23:22:48] -rw------- 1 boinc boinc 175707626 Jun  4 23:20 HITS.45006595._052187.pool.root.1
[2025-06-04 23:22:48] -rw-r--r-- 1 boinc boinc       529 Jun  4 23:20 boinc_task_state.xml
[2025-06-04 23:22:48] -rw------- 1 boinc boinc      1021 Jun  4 23:21 memory_monitor_summary.json
[2025-06-04 23:22:48] -rw------- 1 boinc boinc    379166 Jun  4 23:21 log.45006595._052187.job.log.tgz.1
[2025-06-04 23:22:48] -rw------- 1 boinc boinc        95 Jun  4 23:21 pilot_heartbeat.json
[2025-06-04 23:22:48] -rw------- 1 boinc boinc      7691 Jun  4 23:22 heartbeat.json
[2025-06-04 23:22:48] -rw------- 1 boinc boinc      4551 Jun  4 23:22 pilotlog.txt
[2025-06-04 23:22:48] -rw------- 1 boinc boinc    605695 Jun  4 23:22 log.45006595._052187.job.log.1
[2025-06-04 23:22:48] -rw------- 1 boinc boinc       357 Jun  4 23:22 output.list
[2025-06-04 23:22:48] -rw-r--r-- 1 boinc boinc       620 Jun  4 23:22 runtime_log
[2025-06-04 23:22:48] -rw------- 1 boinc boinc   1003520 Jun  4 23:22 result.tar.gz
[2025-06-04 23:22:48] -rw-r--r-- 1 boinc boinc      8720 Jun  4 23:22 runtime_log.err
[2025-06-04 23:22:48] -rw------- 1 boinc boinc       663 Jun  4 23:22 qJCNDmgiug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmv9mKDmQg3LTm.diag
[2025-06-04 23:22:48] -rw-r--r-- 1 boinc boinc        26 Jun  4 23:22 wrapper_checkpoint.txt
[2025-06-04 23:22:48] -rw-r--r-- 1 boinc boinc      8192 Jun  4 23:22 boinc_mmap_file
[2025-06-04 23:22:48] -rw-r--r-- 1 boinc boinc     21207 Jun  4 23:22 stderr.txt
[2025-06-04 23:22:48] HITS file was successfully produced:
[2025-06-04 23:22:48] -rw------- 1 boinc boinc 175707626 Jun  4 23:20 shared/HITS.pool.root.1
[2025-06-04 23:22:48]  *** Contents of shared directory: ***
[2025-06-04 23:22:48] total 383216
[2025-06-04 23:22:48] -rw-r--r-- 2 boinc boinc 215159456 Jun  4 21:23 ATLAS.root_0
[2025-06-04 23:22:48] -rw-r--r-- 2 boinc boinc     15093 Jun  4 21:23 start_atlas.sh
[2025-06-04 23:22:48] -rw-r--r-- 2 boinc boinc    508880 Jun  4 21:23 input.tar.gz
[2025-06-04 23:22:48] -rw------- 1 boinc boinc 175707626 Jun  4 23:20 HITS.pool.root.1
[2025-06-04 23:22:48] -rw------- 1 boinc boinc   1003520 Jun  4 23:22 result.tar.gz
23:22:50 (2501194): run_atlas exited; CPU time 34861.481372
23:22:50 (2501194): called boinc_finish(0)

</stderr_txt>
]]>

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