Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:04:43 (7307): wrapper (7.7.26015): starting
08:04:43 (7307): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 08:04:43] Arguments: --nthreads 12
[2025-06-04 08:04:43] Threads: 12
[2025-06-04 08:04:43] Checking for CVMFS
[2025-06-04 08:04:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:04:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:04:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:04:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:04:43] 2.11.2.0 2916 35612 88360 146779 1 56 11014399 20275200 1 130560 0 16238964 99.983 6646269 7927 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 08:04:43] CVMFS is ok
[2025-06-04 08:04:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:04:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:04:43] Further information can be found at the LHC@home message board.
[2025-06-04 08:04:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:04:43] Checking for apptainer binary...
[2025-06-04 08:04:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:04:43] Running /usr/bin/apptainer --version
[2025-06-04 08:04:43] apptainer version 1.3.2-1.el7
[2025-06-04 08:04:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:04:45] c-205-23.aglt2.org
[2025-06-04 08:04:45] apptainer works
[2025-06-04 08:04:45] Set ATHENA_PROC_NUMBER=12
[2025-06-04 08:04:45] Set ATHENA_CORE_NUMBER=12
[2025-06-04 08:04:45] Starting ATLAS job with PandaID=6678392200
[2025-06-04 08:04:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:06:47]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:06:47]  is_tar=False
[2025-06-04 09:06:47]  lfn=log.45006595._055229.job.log.tgz.1
[2025-06-04 09:06:47]  mtime=0
[2025-06-04 09:06:47]  protocol_id=None
[2025-06-04 09:06:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:06:47]  replicas=None
[2025-06-04 09:06:47]  scope=mc23_13p6TeV
[2025-06-04 09:06:47]  status=None
[2025-06-04 09:06:47]  status_code=0
[2025-06-04 09:06:47]  storage_token=
[2025-06-04 09:06:47]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678392200/log.45006595._055229.job.log.tgz.1
[2025-06-04 09:06:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/c0/log.45006595._055229.job.log.tgz.1
[2025-06-04 09:06:47]  workdir=None
[2025-06-04 09:06:47] ]
[2025-06-04 09:06:47] 2025-06-04 13:06:25,756 | INFO     | transferring file log.45006595._055229.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678392200/log.45006595._055229.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:06:47] 2025-06-04 13:06:25,756 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678392200/log.45006595._055229.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._055229.job
[2025-06-04 09:06:47] 2025-06-04 13:06:25,781 | INFO     | adding to output.list: log.45006595._055229.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/c0/log.45006595._055229.job.log.tg
[2025-06-04 09:06:47] 2025-06-04 13:06:25,782 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:06:47] 2025-06-04 13:06:25,783 | INFO     | summary of transferred files:
[2025-06-04 09:06:47] 2025-06-04 13:06:25,783 | INFO     |  -- lfn=log.45006595._055229.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:06:47] 2025-06-04 13:06:25,783 | INFO     | stage-out finished correctly
[2025-06-04 09:06:47] 2025-06-04 13:06:25,870 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:06:47] 2025-06-04 13:06:26,942 | INFO     | job 6678392200 has state=finished
[2025-06-04 09:06:47] 2025-06-04 13:06:26,942 | INFO     | preparing for final server update for job 6678392200 in state='finished'
[2025-06-04 09:06:47] 2025-06-04 13:06:27,002 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 09:06:47] 2025-06-04 13:06:27,002 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:06:47] 2025-06-04 13:06:27,002 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:06:47] 2025-06-04 13:06:27,002 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:06:47] 2025-06-04 13:06:27,002 | INFO     | job 6678392200 has finished - writing final server update
[2025-06-04 09:06:47] 2025-06-04 13:06:27,003 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:06:47] 2025-06-04 13:06:27,003 | INFO     | executing command: lscpu
[2025-06-04 09:06:47] 2025-06-04 13:06:27,032 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:06:47] 2025-06-04 13:06:27,464 | WARNING  | process 18355 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:06:47] 2025-06-04 13:06:27,464 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678392200/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:06:47] 2025-06-04 13:06:27,465 | INFO     | reaping zombies for max 20 seconds
[2025-06-04 09:06:47] 2025-06-04 13:06:27,477 | INFO     | checking for looping job (in state=finished)
[2025-06-04 09:06:47] 2025-06-04 13:06:27,477 | INFO     | using looping job limit: 7200 s
[2025-06-04 09:06:47] 2025-06-04 13:06:27,571 | INFO     | number of running child processes to parent process 18355: 1
[2025-06-04 09:06:47] 2025-06-04 13:06:27,571 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:06:47] 2025-06-04 13:06:30,074 | INFO     | monitor loop #278: job 0:6678392200 is in state 'finished'
[2025-06-04 09:06:47] 2025-06-04 13:06:30,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:06:47] 2025-06-04 13:06:31,607 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 09:06:47] 2025-06-04 13:06:31,607 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678392200/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:06:47] 2025-06-04 13:06:31,608 | INFO     | extracted standard info from prmon json
[2025-06-04 09:06:47] 2025-06-04 13:06:31,608 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:06:47] 2025-06-04 13:06:31,608 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:06:47] 2025-06-04 13:06:31,609 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:06:47] 2025-06-04 13:06:31,609 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:06:47] 2025-06-04 13:06:31,611 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:06:47] 2025-06-04 13:06:31,611 | INFO     | sum of square deviations: 46147842.0
[2025-06-04 09:06:47] 2025-06-04 13:06:31,611 | INFO     | sum of deviations: -1562645296.0
[2025-06-04 09:06:47] 2025-06-04 13:06:31,612 | INFO     | mean x: 1749040621.0
[2025-06-04 09:06:47] 2025-06-04 13:06:31,612 | INFO     | mean y: 2686287.3396226414
[2025-06-04 09:06:47] 2025-06-04 13:06:31,612 | INFO     | -- intersect: 59228209745.58863
[2025-06-04 09:06:47] 2025-06-04 13:06:31,612 | INFO     | intersect: 59228209745.58863
[2025-06-04 09:06:47] 2025-06-04 13:06:31,613 | INFO     | chi2: 0.05467220616077003
[2025-06-04 09:06:47] 2025-06-04 13:06:31,613 | INFO     | -- intersect: 59228209745.58863
[2025-06-04 09:06:47] 2025-06-04 13:06:31,613 | INFO     | current memory leak: -33.86 B/s (using 53 data points, chi2=0.05)
[2025-06-04 09:06:47] 2025-06-04 13:06:31,614 | INFO     | ..............................
[2025-06-04 09:06:47] 2025-06-04 13:06:31,614 | INFO     | . Timing measurements:
[2025-06-04 09:06:47] 2025-06-04 13:06:31,614 | INFO     | . get job = 0 s
[2025-06-04 09:06:47] 2025-06-04 13:06:31,614 | INFO     | . initial setup = 2 s
[2025-06-04 09:06:47] 2025-06-04 13:06:31,614 | INFO     | . payload setup = 9 s
[2025-06-04 09:06:47] 2025-06-04 13:06:31,614 | INFO     | . stage-in = 0 s
[2025-06-04 09:06:47] 2025-06-04 13:06:31,614 | INFO     | . payload execution = 3657 s
[2025-06-04 09:06:47] 2025-06-04 13:06:31,615 | INFO     | . stage-out = 0 s
[2025-06-04 09:06:47] 2025-06-04 13:06:31,615 | INFO     | . log creation = 0 s
[2025-06-04 09:06:47] 2025-06-04 13:06:31,615 | INFO     | ..............................
[2025-06-04 09:06:47] 2025-06-04 13:06:31,700 | INFO     | 
[2025-06-04 09:06:47] 2025-06-04 13:06:31,700 | INFO     | job summary report
[2025-06-04 09:06:47] 2025-06-04 13:06:31,701 | INFO     | --------------------------------------------------
[2025-06-04 09:06:47] 2025-06-04 13:06:31,701 | INFO     | PanDA job id: 6678392200
[2025-06-04 09:06:47] 2025-06-04 13:06:31,701 | INFO     | task id: 45006595
[2025-06-04 09:06:47] 2025-06-04 13:06:31,701 | INFO     | errors: (none)
[2025-06-04 09:06:47] 2025-06-04 13:06:31,701 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:06:47] 2025-06-04 13:06:31,701 | INFO     | pilot state: finished 
[2025-06-04 09:06:47] 2025-06-04 13:06:31,702 | INFO     | transexitcode: 0
[2025-06-04 09:06:47] 2025-06-04 13:06:31,702 | INFO     | exeerrorcode: 0
[2025-06-04 09:06:47] 2025-06-04 13:06:31,702 | INFO     | exeerrordiag: 
[2025-06-04 09:06:47] 2025-06-04 13:06:31,702 | INFO     | exitcode: 0
[2025-06-04 09:06:47] 2025-06-04 13:06:31,702 | INFO     | exitmsg: OK
[2025-06-04 09:06:47] 2025-06-04 13:06:31,702 | INFO     | cpuconsumptiontime: 39080 s
[2025-06-04 09:06:47] 2025-06-04 13:06:31,703 | INFO     | nevents: 400
[2025-06-04 09:06:47] 2025-06-04 13:06:31,703 | INFO     | neventsw: 0
[2025-06-04 09:06:47] 2025-06-04 13:06:31,703 | INFO     | pid: 18355
[2025-06-04 09:06:47] 2025-06-04 13:06:31,703 | INFO     | pgrp: 18355
[2025-06-04 09:06:47] 2025-06-04 13:06:31,703 | INFO     | corecount: 12
[2025-06-04 09:06:47] 2025-06-04 13:06:31,703 | INFO     | event service: False
[2025-06-04 09:06:47] 2025-06-04 13:06:31,704 | INFO     | sizes: {0: 2397341, 1: 2397341, 5: 2397575, 11: 2397631, 3670: 2423199, 3671: 2432324, 3677: 2432438}
[2025-06-04 09:06:47] 2025-06-04 13:06:31,704 | INFO     | --------------------------------------------------
[2025-06-04 09:06:47] 2025-06-04 13:06:31,704 | INFO     | 
[2025-06-04 09:06:47] 2025-06-04 13:06:31,704 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 09:06:47] 2025-06-04 13:06:31,729 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:06:47] 2025-06-04 13:06:31,730 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:06:47] 2025-06-04 13:06:31,730 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:06:47] 2025-06-04 13:06:31,730 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:06:47] 2025-06-04 13:06:31,730 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:06:47] 2025-06-04 13:06:31,730 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:06:47] 2025-06-04 13:06:31,730 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:06:47] 2025-06-04 13:06:31,730 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:06:47] 2025-06-04 13:06:31,731 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:06:47] 2025-06-04 13:06:31,731 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:06:47] 2025-06-04 13:06:31,731 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:06:47] 2025-06-04 13:06:31,731 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:06:47] 2025-06-04 13:06:31,731 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:06:47] 2025-06-04 13:06:31,731 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:06:47] 2025-06-04 13:06:31,731 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:06:47] 2025-06-04 13:06:31,732 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:06:47] 2025-06-04 13:06:31,732 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:06:47] 2025-06-04 13:06:31,732 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:06:47] 2025-06-04 13:06:31,732 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:06:47] 2025-06-04 13:06:31,732 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:06:47] 2025-06-04 13:06:31,732 | INFO     | job 6678392200 has completed (purged errors)
[2025-06-04 09:06:47] 2025-06-04 13:06:31,733 | INFO     | overall cleanup function is called
[2025-06-04 09:06:47] 2025-06-04 13:06:32,741 | INFO     | --- collectZombieJob: --- 10, [18355]
[2025-06-04 09:06:47] 2025-06-04 13:06:32,741 | INFO     | zombie collector waiting for pid 18355
[2025-06-04 09:06:47] 2025-06-04 13:06:32,741 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:06:47] 2025-06-04 13:06:32,741 | INFO     | collected zombie processes
[2025-06-04 09:06:47] 2025-06-04 13:06:32,741 | INFO     | will attempt to kill all subprocesses of pid=18355
[2025-06-04 09:06:47] 2025-06-04 13:06:32,835 | INFO     | process IDs to be killed: [18355] (in reverse order)
[2025-06-04 09:06:47] 2025-06-04 13:06:32,887 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:06:47] 2025-06-04 13:06:32,888 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:06:47] 2025-06-04 13:06:32,891 | INFO     | did not find any defunct processes belonging to 18355
[2025-06-04 09:06:47] 2025-06-04 13:06:32,893 | INFO     | did not find any defunct processes belonging to 18355
[2025-06-04 09:06:47] 2025-06-04 13:06:32,893 | INFO     | ready for new job
[2025-06-04 09:06:47] 2025-06-04 13:06:32,894 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:06:47] 2025-06-04 13:06:32,894 | INFO     | **************************************
[2025-06-04 09:06:47] 2025-06-04 13:06:32,895 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:06:47] 2025-06-04 13:06:32,895 | INFO     | **************************************
[2025-06-04 09:06:47] 2025-06-04 13:06:32,895 | INFO     | 
[2025-06-04 09:06:47] 2025-06-04 13:06:32,895 | INFO     | architecture information:
[2025-06-04 09:06:47] 2025-06-04 13:06:32,896 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:06:47] 2025-06-04 13:06:32,911 | INFO     | cat /etc/os-release:
[2025-06-04 09:06:47] NAME="CentOS Linux"
[2025-06-04 09:06:47] VERSION="7 (Core)"
[2025-06-04 09:06:47] ID="centos"
[2025-06-04 09:06:47] ID_LIKE="rhel fedora"
[2025-06-04 09:06:47] VERSION_ID="7"
[2025-06-04 09:06:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:06:47] ANSI_COLOR="0;31"
[2025-06-04 09:06:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:06:47] HOME_URL="https://www.centos.org/"
[2025-06-04 09:06:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:06:47] 
[2025-06-04 09:06:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:06:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:06:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:06:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:06:47] 
[2025-06-04 09:06:47] 2025-06-04 13:06:32,912 | INFO     | **************************************
[2025-06-04 09:06:47] 2025-06-04 13:06:33,415 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 09:06:47] 2025-06-04 13:06:33,432 | INFO     | sufficient remaining disk space (29424091136 B)
[2025-06-04 09:06:47] 2025-06-04 13:06:33,432 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:06:47] 2025-06-04 13:06:33,433 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:06:47] 2025-06-04 13:06:33,433 | INFO     | update_server=False
[2025-06-04 09:06:47] 2025-06-04 13:06:33,433 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:06:47] 2025-06-04 13:06:33,433 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:06:47] 2025-06-04 13:06:33,462 | INFO     | all payload control threads have been joined
[2025-06-04 09:06:47] 2025-06-04 13:06:33,583 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:06:47] 2025-06-04 13:06:33,583 | INFO     | aborting loop
[2025-06-04 09:06:47] 2025-06-04 13:06:33,881 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:06:47] 2025-06-04 13:06:34,090 | INFO     | all job control threads have been joined
[2025-06-04 09:06:47] 2025-06-04 13:06:34,218 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:06:47] 2025-06-04 13:06:34,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:06:47] 2025-06-04 13:06:34,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:06:47] 2025-06-04 13:06:34,244 | INFO     | all data control threads have been joined
[2025-06-04 09:06:47] 2025-06-04 13:06:34,434 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:06:47] 2025-06-04 13:06:34,439 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:06:47] 2025-06-04 13:06:34,467 | INFO     | [payload] control thread has finished
[2025-06-04 09:06:47] 2025-06-04 13:06:34,588 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:06:47] 2025-06-04 13:06:34,813 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:06:47] 2025-06-04 13:06:34,975 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:06:47] 2025-06-04 13:06:35,001 | INFO     | [job] validate thread has finished
[2025-06-04 09:06:47] 2025-06-04 13:06:35,095 | INFO     | [job] control thread has finished
[2025-06-04 09:06:47] 2025-06-04 13:06:35,169 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:06:47] 2025-06-04 13:06:35,187 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:06:47] 2025-06-04 13:06:35,249 | INFO     | [data] control thread has finished
[2025-06-04 09:06:47] 2025-06-04 13:06:35,412 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:06:47] 2025-06-04 13:06:35,652 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:06:47] 2025-06-04 13:06:35,887 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:06:47] 2025-06-04 13:06:35,906 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:06:47] 2025-06-04 13:06:36,469 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:06:47] 2025-06-04 13:06:40,475 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:06:47] 2025-06-04 13:06:42,199 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140131044919104)>', '<ExcThread(monitor, started 140129993737984)>']
[2025-06-04 09:06:47] 2025-06-04 13:06:42,246 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:06:47] 2025-06-04 13:06:42,247 | INFO     | [monitor] control thread has ended
[2025-06-04 09:06:47] 2025-06-04 13:06:47,229 | INFO     | all workflow threads have been joined
[2025-06-04 09:06:47] 2025-06-04 13:06:47,233 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:06:47] 2025-06-04 13:06:47,234 | INFO     | traces error code: 0
[2025-06-04 09:06:47] 2025-06-04 13:06:47,234 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:06:47] 2025-06-04 13:06:47,326 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:06:47] 2025-06-04 13:06:47,330 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:06:47] 2025-06-04 13:06:47,333 [wrapper] pilotpid: 10893
[2025-06-04 09:06:47] 2025-06-04 13:06:47,337 [wrapper] Pilot exit status: 0
[2025-06-04 09:06:47] 2025-06-04 13:06:47,354 [wrapper] pandaids: 6678392200
[2025-06-04 09:06:47] 2025-06-04 13:06:47,401 [wrapper] cleanup supervisor_pilot 23603 10894
[2025-06-04 09:06:47] 2025-06-04 13:06:47,405 [wrapper] Test setup, not cleaning
[2025-06-04 09:06:47] 2025-06-04 13:06:47,409 [wrapper] apfmon messages muted
[2025-06-04 09:06:47] 2025-06-04 13:06:47,413 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:06:47] 2025-06-04 13:06:47,417 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:06:47]  *** Error codes and diagnostics ***
[2025-06-04 09:06:47]     "exeErrorCode": 0,
[2025-06-04 09:06:47]     "exeErrorDiag": "",
[2025-06-04 09:06:47]     "pilotErrorCode": 0,
[2025-06-04 09:06:47]     "pilotErrorDiag": "",
[2025-06-04 09:06:47]  *** Listing of results directory ***
[2025-06-04 09:06:47] total 384884
[2025-06-04 09:06:47] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 09:06:47] -rwx------ 1 boincer umatlas     37140 Jun  4 03:42 runpilot2-wrapper.sh
[2025-06-04 09:06:47] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:42 queuedata.json
[2025-06-04 09:06:47] -rw-r--r-- 1 boincer umatlas       100 Jun  4 08:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:06:47] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 08:04 run_atlas
[2025-06-04 09:06:47] -rw-r--r-- 1 boincer umatlas       105 Jun  4 08:04 job.xml
[2025-06-04 09:06:47] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:04 start_atlas.sh
[2025-06-04 09:06:47] drwxrwx--x 2 boincer umatlas      4096 Jun  4 08:04 shared
[2025-06-04 09:06:47] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 08:04 input.tar.gz
[2025-06-04 09:06:47] -rw-r--r-- 2 boincer umatlas 215256206 Jun  4 08:04 EVNT.45006593._002210.pool.root.1
[2025-06-04 09:06:47] -rw-r--r-- 1 boincer umatlas         0 Jun  4 08:04 boinc_lockfile
[2025-06-04 09:06:47] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 08:04 pandaJob.out
[2025-06-04 09:06:47] -rw------- 1 boincer umatlas    986812 Jun  4 08:04 agis_schedconf.cvmfs.json
[2025-06-04 09:06:47] -rw------- 1 boincer umatlas   1598969 Jun  4 08:04 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:06:47] drwx------ 4 boincer umatlas      4096 Jun  4 08:04 pilot3
[2025-06-04 09:06:47] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 09:01 init_data.xml
[2025-06-04 09:06:47] -rw------- 1 boincer umatlas        95 Jun  4 09:05 pilot_heartbeat.json
[2025-06-04 09:06:47] -rw------- 1 boincer umatlas 173623891 Jun  4 09:05 HITS.45006595._055229.pool.root.1
[2025-06-04 09:06:47] -rw-r--r-- 1 boincer umatlas        27 Jun  4 09:06 wrapper_checkpoint.txt
[2025-06-04 09:06:47] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 09:06 boinc_mmap_file
[2025-06-04 09:06:47] -rw-r--r-- 1 boincer umatlas       529 Jun  4 09:06 boinc_task_state.xml
[2025-06-04 09:06:47] -rw------- 1 boincer umatlas      1047 Jun  4 09:06 memory_monitor_summary.json
[2025-06-04 09:06:47] -rw------- 1 boincer umatlas    344113 Jun  4 09:06 log.45006595._055229.job.log.tgz.1
[2025-06-04 09:06:47] -rw------- 1 boincer umatlas      7748 Jun  4 09:06 heartbeat.json
[2025-06-04 09:06:47] -rw------- 1 boincer umatlas      4353 Jun  4 09:06 pilotlog.txt
[2025-06-04 09:06:47] -rw------- 1 boincer umatlas    364405 Jun  4 09:06 log.45006595._055229.job.log.1
[2025-06-04 09:06:47] -rw------- 1 boincer umatlas       357 Jun  4 09:06 output.list
[2025-06-04 09:06:47] -rw-r--r-- 1 boincer umatlas       620 Jun  4 09:06 runtime_log
[2025-06-04 09:06:47] -rw------- 1 boincer umatlas    727040 Jun  4 09:06 result.tar.gz
[2025-06-04 09:06:47] -rw------- 1 boincer umatlas       659 Jun  4 09:06 swYNDmAxxg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm9waKDmjKPqsn.diag
[2025-06-04 09:06:47] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 09:06 runtime_log.err
[2025-06-04 09:06:47] -rw-r--r-- 1 boincer umatlas     21378 Jun  4 09:06 stderr.txt
[2025-06-04 09:06:47] HITS file was successfully produced:
[2025-06-04 09:06:47] -rw------- 1 boincer umatlas 173623891 Jun  4 09:05 shared/HITS.pool.root.1
[2025-06-04 09:06:47]  *** Contents of shared directory: ***
[2025-06-04 09:06:47] total 380996
[2025-06-04 09:06:47] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:04 start_atlas.sh
[2025-06-04 09:06:47] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 08:04 input.tar.gz
[2025-06-04 09:06:47] -rw-r--r-- 2 boincer umatlas 215256206 Jun  4 08:04 ATLAS.root_0
[2025-06-04 09:06:47] -rw------- 1 boincer umatlas 173623891 Jun  4 09:05 HITS.pool.root.1
[2025-06-04 09:06:47] -rw------- 1 boincer umatlas    727040 Jun  4 09:06 result.tar.gz
09:06:49 (7307): run_atlas exited; CPU time 39054.455713
09:06:49 (7307): called boinc_finish(0)

</stderr_txt>
]]>

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