Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:02:50 (1237781): wrapper (7.7.26015): starting
08:02:50 (1237781): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:02:50] Arguments: --nthreads 8
[2025-06-04 08:02:50] Threads: 8
[2025-06-04 08:02:50] Checking for CVMFS
[2025-06-04 08:02:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:02:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:02:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:02:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:02:51] 2.12.6.0 7662 1312 210388 146779 0 460 16616049 32935937 25840 16776704 0 19821450 99.758 9530742 24920 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:02:51] CVMFS is ok
[2025-06-04 08:02:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:02:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:02:51] Further information can be found at the LHC@home message board.
[2025-06-04 08:02:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:02:51] Checking for apptainer binary...
[2025-06-04 08:02:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:02:51] Running /usr/bin/apptainer --version
[2025-06-04 08:02:51] apptainer version 1.4.1-1.el9
[2025-06-04 08:02:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:02:51] c7-3-29.aglt2.org
[2025-06-04 08:02:51] apptainer works
[2025-06-04 08:02:51] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:02:51] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:02:51] Starting ATLAS job with PandaID=6678772215
[2025-06-04 08:02:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:09:19]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:09:19]  is_tar=False
[2025-06-04 09:09:19]  lfn=log.45006595._055579.job.log.tgz.1
[2025-06-04 09:09:19]  mtime=0
[2025-06-04 09:09:19]  protocol_id=None
[2025-06-04 09:09:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:09:19]  replicas=None
[2025-06-04 09:09:19]  scope=mc23_13p6TeV
[2025-06-04 09:09:19]  status=None
[2025-06-04 09:09:19]  status_code=0
[2025-06-04 09:09:19]  storage_token=
[2025-06-04 09:09:19]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678772215/log.45006595._055579.job.log.tgz.1
[2025-06-04 09:09:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/b4/log.45006595._055579.job.log.tgz.1
[2025-06-04 09:09:19]  workdir=None
[2025-06-04 09:09:19] ]
[2025-06-04 09:09:19] 2025-06-04 13:08:52,037 | INFO     | transferring file log.45006595._055579.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678772215/log.45006595._055579.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:09:19] 2025-06-04 13:08:52,037 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678772215/log.45006595._055579.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._055579.job
[2025-06-04 09:09:19] 2025-06-04 13:08:52,057 | INFO     | adding to output.list: log.45006595._055579.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/b4/log.45006595._055579.job.log.tg
[2025-06-04 09:09:19] 2025-06-04 13:08:52,058 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:09:19] 2025-06-04 13:08:52,058 | INFO     | summary of transferred files:
[2025-06-04 09:09:19] 2025-06-04 13:08:52,058 | INFO     |  -- lfn=log.45006595._055579.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:09:19] 2025-06-04 13:08:52,058 | INFO     | stage-out finished correctly
[2025-06-04 09:09:19] 2025-06-04 13:08:52,540 | WARNING  | process 1248641 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:09:19] 2025-06-04 13:08:52,540 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678772215/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:09:19] 2025-06-04 13:08:52,880 | INFO     | number of running child processes to parent process 1248641: 1
[2025-06-04 09:09:19] 2025-06-04 13:08:52,880 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:09:19] 2025-06-04 13:08:54,842 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:09:19] 2025-06-04 13:08:55,329 | INFO     | job 6678772215 has state=finished
[2025-06-04 09:09:19] 2025-06-04 13:08:55,331 | INFO     | preparing for final server update for job 6678772215 in state='finished'
[2025-06-04 09:09:19] 2025-06-04 13:08:55,332 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:09:19] 2025-06-04 13:08:55,332 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:09:19] 2025-06-04 13:08:55,332 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:09:19] 2025-06-04 13:08:55,332 | INFO     | job 6678772215 has finished - writing final server update
[2025-06-04 09:09:19] 2025-06-04 13:08:55,332 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:09:19] 2025-06-04 13:08:55,350 | INFO     | executing command: lscpu
[2025-06-04 09:09:19] 2025-06-04 13:08:55,388 | INFO     | monitor loop #288: job 0:6678772215 is in state 'finished'
[2025-06-04 09:09:19] 2025-06-04 13:08:55,388 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:09:19] 2025-06-04 13:08:55,430 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:09:19] 2025-06-04 13:08:57,891 | INFO     | monitor loop #289: job 0:6678772215 is in state 'finished'
[2025-06-04 09:09:19] 2025-06-04 13:08:57,891 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:09:19] 2025-06-04 13:08:59,279 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 09:09:19] 2025-06-04 13:08:59,280 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678772215/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:09:19] 2025-06-04 13:08:59,281 | INFO     | extracted standard info from prmon json
[2025-06-04 09:09:19] 2025-06-04 13:08:59,281 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:09:19] 2025-06-04 13:08:59,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:09:19] 2025-06-04 13:08:59,281 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:09:19] 2025-06-04 13:08:59,281 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:09:19] 2025-06-04 13:08:59,282 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:09:19] 2025-06-04 13:08:59,282 | INFO     | sum of square deviations: 60482994.5
[2025-06-04 09:09:19] 2025-06-04 13:08:59,282 | INFO     | sum of deviations: 6954274652.5
[2025-06-04 09:09:19] 2025-06-04 13:08:59,282 | INFO     | mean x: 1749040651.5
[2025-06-04 09:09:19] 2025-06-04 13:08:59,282 | INFO     | mean y: 2115202.4655172415
[2025-06-04 09:09:19] 2025-06-04 13:08:59,282 | INFO     | -- intersect: -201100842239.8704
[2025-06-04 09:09:19] 2025-06-04 13:08:59,282 | INFO     | intersect: -201100842239.8704
[2025-06-04 09:09:19] 2025-06-04 13:08:59,282 | INFO     | chi2: 0.7257306574564379
[2025-06-04 09:09:19] 2025-06-04 13:08:59,283 | INFO     | -- intersect: -201100842239.8704
[2025-06-04 09:09:19] 2025-06-04 13:08:59,283 | INFO     | current memory leak: 114.98 B/s (using 58 data points, chi2=0.73)
[2025-06-04 09:09:19] 2025-06-04 13:08:59,283 | INFO     | ..............................
[2025-06-04 09:09:19] 2025-06-04 13:08:59,283 | INFO     | . Timing measurements:
[2025-06-04 09:09:19] 2025-06-04 13:08:59,283 | INFO     | . get job = 0 s
[2025-06-04 09:09:19] 2025-06-04 13:08:59,283 | INFO     | . initial setup = 2 s
[2025-06-04 09:09:19] 2025-06-04 13:08:59,283 | INFO     | . payload setup = 6 s
[2025-06-04 09:09:19] 2025-06-04 13:08:59,283 | INFO     | . stage-in = 0 s
[2025-06-04 09:09:19] 2025-06-04 13:08:59,283 | INFO     | . payload execution = 3923 s
[2025-06-04 09:09:19] 2025-06-04 13:08:59,283 | INFO     | . stage-out = 0 s
[2025-06-04 09:09:19] 2025-06-04 13:08:59,283 | INFO     | . log creation = 0 s
[2025-06-04 09:09:19] 2025-06-04 13:08:59,283 | INFO     | ..............................
[2025-06-04 09:09:19] 2025-06-04 13:08:59,326 | INFO     | 
[2025-06-04 09:09:19] 2025-06-04 13:08:59,326 | INFO     | job summary report
[2025-06-04 09:09:19] 2025-06-04 13:08:59,326 | INFO     | --------------------------------------------------
[2025-06-04 09:09:19] 2025-06-04 13:08:59,326 | INFO     | PanDA job id: 6678772215
[2025-06-04 09:09:19] 2025-06-04 13:08:59,326 | INFO     | task id: 45006595
[2025-06-04 09:09:19] 2025-06-04 13:08:59,326 | INFO     | errors: (none)
[2025-06-04 09:09:19] 2025-06-04 13:08:59,326 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:09:19] 2025-06-04 13:08:59,326 | INFO     | pilot state: finished 
[2025-06-04 09:09:19] 2025-06-04 13:08:59,326 | INFO     | transexitcode: 0
[2025-06-04 09:09:19] 2025-06-04 13:08:59,326 | INFO     | exeerrorcode: 0
[2025-06-04 09:09:19] 2025-06-04 13:08:59,326 | INFO     | exeerrordiag: 
[2025-06-04 09:09:19] 2025-06-04 13:08:59,326 | INFO     | exitcode: 0
[2025-06-04 09:09:19] 2025-06-04 13:08:59,326 | INFO     | exitmsg: OK
[2025-06-04 09:09:19] 2025-06-04 13:08:59,326 | INFO     | cpuconsumptiontime: 26193 s
[2025-06-04 09:09:19] 2025-06-04 13:08:59,326 | INFO     | nevents: 400
[2025-06-04 09:09:19] 2025-06-04 13:08:59,327 | INFO     | neventsw: 0
[2025-06-04 09:09:19] 2025-06-04 13:08:59,327 | INFO     | pid: 1248641
[2025-06-04 09:09:19] 2025-06-04 13:08:59,327 | INFO     | pgrp: 1248641
[2025-06-04 09:09:19] 2025-06-04 13:08:59,327 | INFO     | corecount: 8
[2025-06-04 09:09:19] 2025-06-04 13:08:59,327 | INFO     | event service: False
[2025-06-04 09:09:19] 2025-06-04 13:08:59,327 | INFO     | sizes: {0: 2397290, 5: 2397496, 11: 2397552, 3933: 2423319, 3935: 2432260, 3938: 2432316, 3942: 2432614}
[2025-06-04 09:09:19] 2025-06-04 13:08:59,327 | INFO     | --------------------------------------------------
[2025-06-04 09:09:19] 2025-06-04 13:08:59,327 | INFO     | 
[2025-06-04 09:09:19] 2025-06-04 13:08:59,327 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 09:09:19] 2025-06-04 13:08:59,345 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:09:19] 2025-06-04 13:08:59,345 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:09:19] 2025-06-04 13:08:59,345 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:09:19] 2025-06-04 13:08:59,345 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:09:19] 2025-06-04 13:08:59,345 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:09:19] 2025-06-04 13:08:59,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:09:19] 2025-06-04 13:08:59,346 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:09:19] 2025-06-04 13:08:59,346 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:09:19] 2025-06-04 13:08:59,346 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:09:19] 2025-06-04 13:08:59,346 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:09:19] 2025-06-04 13:08:59,346 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:09:19] 2025-06-04 13:08:59,346 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:09:19] 2025-06-04 13:08:59,346 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:09:19] 2025-06-04 13:08:59,346 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:09:19] 2025-06-04 13:08:59,346 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:09:19] 2025-06-04 13:08:59,346 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:09:19] 2025-06-04 13:08:59,346 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:09:19] 2025-06-04 13:08:59,346 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:09:19] 2025-06-04 13:08:59,346 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:09:19] 2025-06-04 13:08:59,346 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:09:19] 2025-06-04 13:08:59,346 | INFO     | job 6678772215 has completed (purged errors)
[2025-06-04 09:09:19] 2025-06-04 13:08:59,347 | INFO     | overall cleanup function is called
[2025-06-04 09:09:19] 2025-06-04 13:09:00,354 | INFO     | --- collectZombieJob: --- 10, [1248641]
[2025-06-04 09:09:19] 2025-06-04 13:09:00,354 | INFO     | zombie collector waiting for pid 1248641
[2025-06-04 09:09:19] 2025-06-04 13:09:00,354 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:09:19] 2025-06-04 13:09:00,355 | INFO     | collected zombie processes
[2025-06-04 09:09:19] 2025-06-04 13:09:00,355 | INFO     | will attempt to kill all subprocesses of pid=1248641
[2025-06-04 09:09:19] 2025-06-04 13:09:00,713 | INFO     | process IDs to be killed: [1248641] (in reverse order)
[2025-06-04 09:09:19] 2025-06-04 13:09:00,857 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:09:19] 2025-06-04 13:09:00,857 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:09:19] 2025-06-04 13:09:00,875 | INFO     | did not find any defunct processes belonging to 1248641
[2025-06-04 09:09:19] 2025-06-04 13:09:00,892 | INFO     | did not find any defunct processes belonging to 1248641
[2025-06-04 09:09:19] 2025-06-04 13:09:00,892 | INFO     | ready for new job
[2025-06-04 09:09:19] 2025-06-04 13:09:00,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:09:19] 2025-06-04 13:09:00,894 | INFO     | **************************************
[2025-06-04 09:09:19] 2025-06-04 13:09:00,894 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:09:19] 2025-06-04 13:09:00,896 | INFO     | **************************************
[2025-06-04 09:09:19] 2025-06-04 13:09:00,897 | INFO     | 
[2025-06-04 09:09:19] 2025-06-04 13:09:00,915 | INFO     | architecture information:
[2025-06-04 09:09:19] 2025-06-04 13:09:00,915 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:09:19] 2025-06-04 13:09:00,928 | INFO     | cat /etc/os-release:
[2025-06-04 09:09:19] NAME="CentOS Linux"
[2025-06-04 09:09:19] VERSION="7 (Core)"
[2025-06-04 09:09:19] ID="centos"
[2025-06-04 09:09:19] ID_LIKE="rhel fedora"
[2025-06-04 09:09:19] VERSION_ID="7"
[2025-06-04 09:09:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:09:19] ANSI_COLOR="0;31"
[2025-06-04 09:09:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:09:19] HOME_URL="https://www.centos.org/"
[2025-06-04 09:09:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:09:19] 
[2025-06-04 09:09:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:09:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:09:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:09:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:09:19] 
[2025-06-04 09:09:19] 2025-06-04 13:09:00,928 | INFO     | **************************************
[2025-06-04 09:09:19] 2025-06-04 13:09:01,431 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 09:09:19] 2025-06-04 13:09:01,448 | INFO     | sufficient remaining disk space (75469160448 B)
[2025-06-04 09:09:19] 2025-06-04 13:09:01,449 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:09:19] 2025-06-04 13:09:01,449 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:09:19] 2025-06-04 13:09:01,449 | INFO     | update_server=False
[2025-06-04 09:09:19] 2025-06-04 13:09:01,449 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:09:19] 2025-06-04 13:09:01,450 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:09:19] 2025-06-04 13:09:01,450 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:09:19] 2025-06-04 13:09:01,451 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:09:19] 2025-06-04 13:09:01,451 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:09:19] 2025-06-04 13:09:01,451 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:09:19] 2025-06-04 13:09:01,450 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:09:19] 2025-06-04 13:09:01,451 | INFO     | aborting loop
[2025-06-04 09:09:19] 2025-06-04 13:09:01,871 | INFO     | all job control threads have been joined
[2025-06-04 09:09:19] 2025-06-04 13:09:01,879 | INFO     | all payload control threads have been joined
[2025-06-04 09:09:19] 2025-06-04 13:09:02,004 | INFO     | all data control threads have been joined
[2025-06-04 09:09:19] 2025-06-04 13:09:02,453 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:09:19] 2025-06-04 13:09:02,453 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:09:19] 2025-06-04 13:09:02,518 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:09:19] 2025-06-04 13:09:02,533 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:09:19] 2025-06-04 13:09:02,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:09:19] 2025-06-04 13:09:02,679 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:09:19] 2025-06-04 13:09:02,743 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:09:19] 2025-06-04 13:09:02,747 | INFO     | [job] validate thread has finished
[2025-06-04 09:09:19] 2025-06-04 13:09:02,877 | INFO     | [job] control thread has finished
[2025-06-04 09:09:19] 2025-06-04 13:09:02,884 | INFO     | [payload] control thread has finished
[2025-06-04 09:09:19] 2025-06-04 13:09:03,009 | INFO     | [data] control thread has finished
[2025-06-04 09:09:19] 2025-06-04 13:09:03,264 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:09:19] 2025-06-04 13:09:03,462 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:09:19] 2025-06-04 13:09:04,332 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:09:19] 2025-06-04 13:09:04,639 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:09:19] 2025-06-04 13:09:05,337 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:09:19] 2025-06-04 13:09:05,456 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:09:19] 2025-06-04 13:09:11,709 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:09:19] 2025-06-04 13:09:12,714 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:09:19] 2025-06-04 13:09:14,636 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140288564533056)>', '<ExcThread(monitor, started 140288211261184)>']
[2025-06-04 09:09:19] 2025-06-04 13:09:15,515 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:09:19] 2025-06-04 13:09:15,517 | INFO     | [monitor] control thread has ended
[2025-06-04 09:09:19] 2025-06-04 13:09:19,661 | INFO     | all workflow threads have been joined
[2025-06-04 09:09:19] 2025-06-04 13:09:19,662 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:09:19] 2025-06-04 13:09:19,662 | INFO     | traces error code: 0
[2025-06-04 09:09:19] 2025-06-04 13:09:19,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:09:19] 2025-06-04 13:09:19,818 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:09:19] 2025-06-04 13:09:19,820 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:09:19] 2025-06-04 13:09:19,822 [wrapper] pilotpid: 1241379
[2025-06-04 09:09:19] 2025-06-04 13:09:19,824 [wrapper] Pilot exit status: 0
[2025-06-04 09:09:19] 2025-06-04 13:09:19,834 [wrapper] pandaids: 6678772215
[2025-06-04 09:09:19] 2025-06-04 13:09:19,926 [wrapper] cleanup supervisor_pilot 1704132 1241380
[2025-06-04 09:09:19] 2025-06-04 13:09:19,928 [wrapper] Test setup, not cleaning
[2025-06-04 09:09:19] 2025-06-04 13:09:19,931 [wrapper] apfmon messages muted
[2025-06-04 09:09:19] 2025-06-04 13:09:19,933 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:09:19] 2025-06-04 13:09:19,935 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:09:19]  *** Error codes and diagnostics ***
[2025-06-04 09:09:19]     "exeErrorCode": 0,
[2025-06-04 09:09:19]     "exeErrorDiag": "",
[2025-06-04 09:09:19]     "pilotErrorCode": 0,
[2025-06-04 09:09:19]     "pilotErrorDiag": "",
[2025-06-04 09:09:19]  *** Listing of results directory ***
[2025-06-04 09:09:20] total 396916
[2025-06-04 09:09:20] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 09:09:20] -rwx------. 1 boincer umatlas     37140 Jun  4 03:55 runpilot2-wrapper.sh
[2025-06-04 09:09:20] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:55 queuedata.json
[2025-06-04 09:09:20] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:09:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:02 run_atlas
[2025-06-04 09:09:20] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:02 job.xml
[2025-06-04 09:09:20] -rw-r--r--. 2 boincer umatlas 215855401 Jun  4 08:02 EVNT.45006593._000499.pool.root.1
[2025-06-04 09:09:20] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:02 start_atlas.sh
[2025-06-04 09:09:20] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:02 shared
[2025-06-04 09:09:20] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 08:02 input.tar.gz
[2025-06-04 09:09:20] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:02 boinc_lockfile
[2025-06-04 09:09:20] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 08:02 pandaJob.out
[2025-06-04 09:09:20] -rw-------. 1 boincer umatlas    986812 Jun  4 08:02 agis_schedconf.cvmfs.json
[2025-06-04 09:09:20] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:09:20] drwx------. 4 boincer umatlas      4096 Jun  4 08:03 pilot3
[2025-06-04 09:09:20] -rw-r--r--. 1 boincer umatlas      6931 Jun  4 09:00 init_data.xml
[2025-06-04 09:09:20] -rw-------. 1 boincer umatlas        95 Jun  4 09:08 pilot_heartbeat.json
[2025-06-04 09:09:20] -rw-------. 1 boincer umatlas 185376297 Jun  4 09:08 HITS.45006595._055579.pool.root.1
[2025-06-04 09:09:20] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:08 boinc_task_state.xml
[2025-06-04 09:09:20] -rw-------. 1 boincer umatlas      1033 Jun  4 09:08 memory_monitor_summary.json
[2025-06-04 09:09:20] -rw-------. 1 boincer umatlas    289273 Jun  4 09:08 log.45006595._055579.job.log.tgz.1
[2025-06-04 09:09:20] -rw-------. 1 boincer umatlas      7687 Jun  4 09:08 heartbeat.json
[2025-06-04 09:09:20] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:09 boinc_mmap_file
[2025-06-04 09:09:20] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:09 wrapper_checkpoint.txt
[2025-06-04 09:09:20] -rw-------. 1 boincer umatlas      4548 Jun  4 09:09 pilotlog.txt
[2025-06-04 09:09:20] -rw-------. 1 boincer umatlas    398073 Jun  4 09:09 log.45006595._055579.job.log.1
[2025-06-04 09:09:20] -rw-------. 1 boincer umatlas       357 Jun  4 09:09 output.list
[2025-06-04 09:09:20] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:09 runtime_log
[2025-06-04 09:09:20] -rw-------. 1 boincer umatlas    706560 Jun  4 09:09 result.tar.gz
[2025-06-04 09:09:20] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 09:09 runtime_log.err
[2025-06-04 09:09:20] -rw-------. 1 boincer umatlas       650 Jun  4 09:09 i7QNDmJ9xg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxxaKDmNazDOn.diag
[2025-06-04 09:09:20] -rw-r--r--. 1 boincer umatlas     21501 Jun  4 09:09 stderr.txt
[2025-06-04 09:09:20] HITS file was successfully produced:
[2025-06-04 09:09:20] -rw-------. 1 boincer umatlas 185376297 Jun  4 09:08 shared/HITS.pool.root.1
[2025-06-04 09:09:20]  *** Contents of shared directory: ***
[2025-06-04 09:09:20] total 393048
[2025-06-04 09:09:20] -rw-r--r--. 2 boincer umatlas 215855401 Jun  4 08:02 ATLAS.root_0
[2025-06-04 09:09:20] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:02 start_atlas.sh
[2025-06-04 09:09:20] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 08:02 input.tar.gz
[2025-06-04 09:09:20] -rw-------. 1 boincer umatlas 185376297 Jun  4 09:08 HITS.pool.root.1
[2025-06-04 09:09:20] -rw-------. 1 boincer umatlas    706560 Jun  4 09:09 result.tar.gz
09:09:21 (1237781): run_atlas exited; CPU time 26331.685102
09:09:21 (1237781): called boinc_finish(0)

</stderr_txt>
]]>

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