Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:03:24 (2309067): wrapper (7.7.26015): starting
08:03:24 (2309067): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:03:24] Arguments: --nthreads 8
[2025-06-04 08:03:24] Threads: 8
[2025-06-04 08:03:24] Checking for CVMFS
[2025-06-04 08:03:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:03:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:03:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:03:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:03:25] 2.12.6.0 229055 622 71220 146779 2 187 2456114 40960001 5496 16776704 0 3710574 99.821 871393 60450 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:03:25] CVMFS is ok
[2025-06-04 08:03:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:03:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:03:25] Further information can be found at the LHC@home message board.
[2025-06-04 08:03:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:03:25] Checking for apptainer binary...
[2025-06-04 08:03:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:03:25] Running /usr/bin/apptainer --version
[2025-06-04 08:03:25] apptainer version 1.4.1-1.el9
[2025-06-04 08:03:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:03:25] c6-5-7-4.aglt2.org
[2025-06-04 08:03:25] apptainer works
[2025-06-04 08:03:25] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:03:25] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:03:25] Starting ATLAS job with PandaID=6678718731
[2025-06-04 08:03:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:16:20]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:16:20]  is_altstaged=None
[2025-06-04 09:16:20]  is_tar=False
[2025-06-04 09:16:20]  lfn=log.45006595._055516.job.log.tgz.1
[2025-06-04 09:16:20]  mtime=0
[2025-06-04 09:16:20]  protocol_id=None
[2025-06-04 09:16:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:16:20]  replicas=None
[2025-06-04 09:16:20]  scope=mc23_13p6TeV
[2025-06-04 09:16:20]  status=None
[2025-06-04 09:16:20]  status_code=0
[2025-06-04 09:16:20]  storage_token=
[2025-06-04 09:16:20]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6678718731/log.45006595._055516.job.log.tgz.1
[2025-06-04 09:16:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/94/log.45006595._055516.job.log.tgz.1
[2025-06-04 09:16:20]  workdir=None
[2025-06-04 09:16:20] ]
[2025-06-04 09:16:20] 2025-06-04 13:16:01,224 | INFO     | transferring file log.45006595._055516.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6678718731/log.45006595._055516.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:16:20] 2025-06-04 13:16:01,224 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6678718731/log.45006595._055516.job.log.tgz.1 /tmp/boinchome/slots/4/log.45006595._055516.job
[2025-06-04 09:16:20] 2025-06-04 13:16:01,240 | INFO     | adding to output.list: log.45006595._055516.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/94/log.45006595._055516.job.log.tg
[2025-06-04 09:16:20] 2025-06-04 13:16:01,241 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:16:20] 2025-06-04 13:16:01,241 | INFO     | summary of transferred files:
[2025-06-04 09:16:20] 2025-06-04 13:16:01,241 | INFO     |  -- lfn=log.45006595._055516.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:16:20] 2025-06-04 13:16:01,242 | INFO     | stage-out finished correctly
[2025-06-04 09:16:20] 2025-06-04 13:16:03,432 | INFO     | monitor loop #328: job 0:6678718731 is in state 'finished'
[2025-06-04 09:16:20] 2025-06-04 13:16:03,432 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:16:20] 2025-06-04 13:16:04,605 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:16:20] 2025-06-04 13:16:05,398 | INFO     | job 6678718731 has state=finished
[2025-06-04 09:16:20] 2025-06-04 13:16:05,398 | INFO     | preparing for final server update for job 6678718731 in state='finished'
[2025-06-04 09:16:20] 2025-06-04 13:16:05,399 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:16:20] 2025-06-04 13:16:05,399 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:16:20] 2025-06-04 13:16:05,399 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:16:20] 2025-06-04 13:16:05,399 | INFO     | job 6678718731 has finished - writing final server update
[2025-06-04 09:16:20] 2025-06-04 13:16:05,400 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:16:20] 2025-06-04 13:16:05,416 | INFO     | executing command: lscpu
[2025-06-04 09:16:20] 2025-06-04 13:16:05,476 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:16:20] 2025-06-04 13:16:05,935 | INFO     | monitor loop #329: job 0:6678718731 is in state 'finished'
[2025-06-04 09:16:20] 2025-06-04 13:16:05,936 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:16:20] 2025-06-04 13:16:08,439 | INFO     | monitor loop #330: job 0:6678718731 is in state 'finished'
[2025-06-04 09:16:20] 2025-06-04 13:16:08,439 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:16:20] 2025-06-04 13:16:08,836 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:16:20] 2025-06-04 13:16:08,837 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6678718731/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:16:20] 2025-06-04 13:16:08,838 | INFO     | extracted standard info from prmon json
[2025-06-04 09:16:20] 2025-06-04 13:16:08,838 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:16:20] 2025-06-04 13:16:08,838 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:16:20] 2025-06-04 13:16:08,839 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:16:20] 2025-06-04 13:16:08,839 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:16:20] 2025-06-04 13:16:08,841 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:16:20] 2025-06-04 13:16:08,841 | INFO     | sum of square deviations: 81266640.0
[2025-06-04 09:16:20] 2025-06-04 13:16:08,841 | INFO     | sum of deviations: 11704632816.5
[2025-06-04 09:16:20] 2025-06-04 13:16:08,841 | INFO     | mean x: 1749040866.5
[2025-06-04 09:16:20] 2025-06-04 13:16:08,841 | INFO     | mean y: 2077552.546875
[2025-06-04 09:16:20] 2025-06-04 13:16:08,841 | INFO     | -- intersect: -251907945101.71194
[2025-06-04 09:16:20] 2025-06-04 13:16:08,842 | INFO     | intersect: -251907945101.71194
[2025-06-04 09:16:20] 2025-06-04 13:16:08,842 | INFO     | chi2: 1.0586826316989975
[2025-06-04 09:16:20] 2025-06-04 13:16:08,842 | INFO     | -- intersect: -251907945101.71194
[2025-06-04 09:16:20] 2025-06-04 13:16:08,842 | INFO     | current memory leak: 144.03 B/s (using 64 data points, chi2=1.06)
[2025-06-04 09:16:20] 2025-06-04 13:16:08,843 | INFO     | ..............................
[2025-06-04 09:16:20] 2025-06-04 13:16:08,843 | INFO     | . Timing measurements:
[2025-06-04 09:16:20] 2025-06-04 13:16:08,843 | INFO     | . get job = 0 s
[2025-06-04 09:16:20] 2025-06-04 13:16:08,843 | INFO     | . initial setup = 2 s
[2025-06-04 09:16:20] 2025-06-04 13:16:08,843 | INFO     | . payload setup = 5 s
[2025-06-04 09:16:20] 2025-06-04 13:16:08,843 | INFO     | . stage-in = 0 s
[2025-06-04 09:16:20] 2025-06-04 13:16:08,843 | INFO     | . payload execution = 4319 s
[2025-06-04 09:16:20] 2025-06-04 13:16:08,843 | INFO     | . stage-out = 0 s
[2025-06-04 09:16:20] 2025-06-04 13:16:08,843 | INFO     | . log creation = 0 s
[2025-06-04 09:16:20] 2025-06-04 13:16:08,843 | INFO     | ..............................
[2025-06-04 09:16:20] 2025-06-04 13:16:08,932 | INFO     | 
[2025-06-04 09:16:20] 2025-06-04 13:16:08,932 | INFO     | job summary report
[2025-06-04 09:16:20] 2025-06-04 13:16:08,932 | INFO     | --------------------------------------------------
[2025-06-04 09:16:20] 2025-06-04 13:16:08,932 | INFO     | PanDA job id: 6678718731
[2025-06-04 09:16:20] 2025-06-04 13:16:08,932 | INFO     | task id: 45006595
[2025-06-04 09:16:20] 2025-06-04 13:16:08,932 | INFO     | errors: (none)
[2025-06-04 09:16:20] 2025-06-04 13:16:08,932 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:16:20] 2025-06-04 13:16:08,932 | INFO     | pilot state: finished 
[2025-06-04 09:16:20] 2025-06-04 13:16:08,932 | INFO     | transexitcode: 0
[2025-06-04 09:16:20] 2025-06-04 13:16:08,932 | INFO     | exeerrorcode: 0
[2025-06-04 09:16:20] 2025-06-04 13:16:08,932 | INFO     | exeerrordiag: 
[2025-06-04 09:16:20] 2025-06-04 13:16:08,932 | INFO     | exitcode: 0
[2025-06-04 09:16:20] 2025-06-04 13:16:08,933 | INFO     | exitmsg: OK
[2025-06-04 09:16:20] 2025-06-04 13:16:08,933 | INFO     | cpuconsumptiontime: 27913 s
[2025-06-04 09:16:20] 2025-06-04 13:16:08,933 | INFO     | nevents: 400
[2025-06-04 09:16:20] 2025-06-04 13:16:08,933 | INFO     | neventsw: 0
[2025-06-04 09:16:20] 2025-06-04 13:16:08,933 | INFO     | pid: 2320331
[2025-06-04 09:16:20] 2025-06-04 13:16:08,933 | INFO     | pgrp: 2320331
[2025-06-04 09:16:20] 2025-06-04 13:16:08,933 | INFO     | corecount: 8
[2025-06-04 09:16:20] 2025-06-04 13:16:08,933 | INFO     | event service: False
[2025-06-04 09:16:20] 2025-06-04 13:16:08,933 | INFO     | sizes: {0: 2397113, 1: 2397312, 4: 2397518, 11: 2397546, 4329: 2423543, 4331: 2432484, 4335: 2432668, 4339: 2432838}
[2025-06-04 09:16:20] 2025-06-04 13:16:08,933 | INFO     | --------------------------------------------------
[2025-06-04 09:16:20] 2025-06-04 13:16:08,933 | INFO     | 
[2025-06-04 09:16:20] 2025-06-04 13:16:08,933 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-04 09:16:20] 2025-06-04 13:16:08,950 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:16:20] 2025-06-04 13:16:08,950 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:16:20] 2025-06-04 13:16:08,950 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:16:20] 2025-06-04 13:16:08,950 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:16:20] 2025-06-04 13:16:08,950 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:16:20] 2025-06-04 13:16:08,950 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:16:20] 2025-06-04 13:16:08,950 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:16:20] 2025-06-04 13:16:08,950 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:16:20] 2025-06-04 13:16:08,950 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:16:20] 2025-06-04 13:16:08,951 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:16:20] 2025-06-04 13:16:08,951 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:16:20] 2025-06-04 13:16:08,951 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:16:20] 2025-06-04 13:16:08,951 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:16:20] 2025-06-04 13:16:08,951 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:16:20] 2025-06-04 13:16:08,951 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:16:20] 2025-06-04 13:16:08,951 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:16:20] 2025-06-04 13:16:08,951 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:16:20] 2025-06-04 13:16:08,951 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:16:20] 2025-06-04 13:16:08,951 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:16:20] 2025-06-04 13:16:08,951 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:16:20] 2025-06-04 13:16:08,951 | INFO     | job 6678718731 has completed (purged errors)
[2025-06-04 09:16:20] 2025-06-04 13:16:08,952 | INFO     | overall cleanup function is called
[2025-06-04 09:16:20] 2025-06-04 13:16:09,955 | INFO     | --- collectZombieJob: --- 10, [2320331]
[2025-06-04 09:16:20] 2025-06-04 13:16:09,955 | INFO     | zombie collector waiting for pid 2320331
[2025-06-04 09:16:20] 2025-06-04 13:16:09,955 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:16:20] 2025-06-04 13:16:09,955 | INFO     | collected zombie processes
[2025-06-04 09:16:20] 2025-06-04 13:16:09,955 | INFO     | will attempt to kill all subprocesses of pid=2320331
[2025-06-04 09:16:20] 2025-06-04 13:16:10,149 | INFO     | process IDs to be killed: [2320331] (in reverse order)
[2025-06-04 09:16:20] 2025-06-04 13:16:10,215 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:16:20] 2025-06-04 13:16:10,216 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:16:20] 2025-06-04 13:16:10,223 | INFO     | did not find any defunct processes belonging to 2320331
[2025-06-04 09:16:20] 2025-06-04 13:16:10,229 | INFO     | did not find any defunct processes belonging to 2320331
[2025-06-04 09:16:20] 2025-06-04 13:16:10,230 | INFO     | ready for new job
[2025-06-04 09:16:20] 2025-06-04 13:16:10,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:16:20] 2025-06-04 13:16:10,231 | INFO     | **************************************
[2025-06-04 09:16:20] 2025-06-04 13:16:10,232 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:16:20] 2025-06-04 13:16:10,232 | INFO     | **************************************
[2025-06-04 09:16:20] 2025-06-04 13:16:10,232 | INFO     | 
[2025-06-04 09:16:20] 2025-06-04 13:16:10,248 | INFO     | architecture information:
[2025-06-04 09:16:20] 2025-06-04 13:16:10,249 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:16:20] 2025-06-04 13:16:10,261 | INFO     | cat /etc/os-release:
[2025-06-04 09:16:20] NAME="CentOS Linux"
[2025-06-04 09:16:20] VERSION="7 (Core)"
[2025-06-04 09:16:20] ID="centos"
[2025-06-04 09:16:20] ID_LIKE="rhel fedora"
[2025-06-04 09:16:20] VERSION_ID="7"
[2025-06-04 09:16:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:16:20] ANSI_COLOR="0;31"
[2025-06-04 09:16:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:16:20] HOME_URL="https://www.centos.org/"
[2025-06-04 09:16:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:16:20] 
[2025-06-04 09:16:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:16:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:16:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:16:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:16:20] 
[2025-06-04 09:16:20] 2025-06-04 13:16:10,262 | INFO     | **************************************
[2025-06-04 09:16:20] 2025-06-04 13:16:10,764 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-04 09:16:20] 2025-06-04 13:16:10,777 | INFO     | sufficient remaining disk space (72346501120 B)
[2025-06-04 09:16:20] 2025-06-04 13:16:10,778 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:16:20] 2025-06-04 13:16:10,778 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:16:20] 2025-06-04 13:16:10,778 | INFO     | update_server=False
[2025-06-04 09:16:20] 2025-06-04 13:16:10,778 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:16:20] 2025-06-04 13:16:10,778 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:16:20] 2025-06-04 13:16:10,778 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:16:20] 2025-06-04 13:16:10,779 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:16:20] 2025-06-04 13:16:10,779 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:16:20] 2025-06-04 13:16:10,779 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:16:20] 2025-06-04 13:16:10,779 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:16:20] 2025-06-04 13:16:10,861 | INFO     | all data control threads have been joined
[2025-06-04 09:16:20] 2025-06-04 13:16:10,942 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 09:16:20] 2025-06-04 13:16:10,942 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 09:16:20] 2025-06-04 13:16:10,942 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:16:20] 2025-06-04 13:16:10,942 | INFO     | will abort loop
[2025-06-04 09:16:20] 2025-06-04 13:16:11,152 | INFO     | all payload control threads have been joined
[2025-06-04 09:16:20] 2025-06-04 13:16:11,263 | INFO     | all job control threads have been joined
[2025-06-04 09:16:20] 2025-06-04 13:16:11,783 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:16:20] 2025-06-04 13:16:11,784 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:16:20] 2025-06-04 13:16:11,858 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:16:20] 2025-06-04 13:16:11,866 | INFO     | [data] control thread has finished
[2025-06-04 09:16:20] 2025-06-04 13:16:11,947 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:16:20] 2025-06-04 13:16:12,157 | INFO     | [payload] control thread has finished
[2025-06-04 09:16:20] 2025-06-04 13:16:12,266 | INFO     | [job] control thread has finished
[2025-06-04 09:16:20] 2025-06-04 13:16:12,380 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:16:20] 2025-06-04 13:16:12,462 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:16:20] 2025-06-04 13:16:12,648 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:16:20] 2025-06-04 13:16:12,785 | INFO     | [job] validate thread has finished
[2025-06-04 09:16:20] 2025-06-04 13:16:12,935 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:16:20] 2025-06-04 13:16:13,078 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:16:20] 2025-06-04 13:16:13,116 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:16:20] 2025-06-04 13:16:13,271 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:16:20] 2025-06-04 13:16:13,863 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:16:20] 2025-06-04 13:16:14,782 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:16:20] 2025-06-04 13:16:15,482 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140598721918784)>', '<ExcThread(monitor, started 140598094849792)>']
[2025-06-04 09:16:20] 2025-06-04 13:16:15,805 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:16:20] 2025-06-04 13:16:15,805 | INFO     | [monitor] control thread has ended
[2025-06-04 09:16:20] 2025-06-04 13:16:20,500 | INFO     | all workflow threads have been joined
[2025-06-04 09:16:20] 2025-06-04 13:16:20,500 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:16:20] 2025-06-04 13:16:20,500 | INFO     | traces error code: 0
[2025-06-04 09:16:20] 2025-06-04 13:16:20,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:16:20] 2025-06-04 13:16:20,620 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:16:20] 2025-06-04 13:16:20,622 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:16:20] 2025-06-04 13:16:20,624 [wrapper] pilotpid: 2312643
[2025-06-04 09:16:20] 2025-06-04 13:16:20,626 [wrapper] Pilot exit status: 0
[2025-06-04 09:16:20] 2025-06-04 13:16:20,634 [wrapper] pandaids: 6678718731
[2025-06-04 09:16:20] 2025-06-04 13:16:20,676 [wrapper] cleanup supervisor_pilot 2531712 2312644
[2025-06-04 09:16:20] 2025-06-04 13:16:20,679 [wrapper] Test setup, not cleaning
[2025-06-04 09:16:20] 2025-06-04 13:16:20,681 [wrapper] apfmon messages muted
[2025-06-04 09:16:20] 2025-06-04 13:16:20,684 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:16:20] 2025-06-04 13:16:20,685 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:16:20]  *** Error codes and diagnostics ***
[2025-06-04 09:16:20]     "exeErrorCode": 0,
[2025-06-04 09:16:20]     "exeErrorDiag": "",
[2025-06-04 09:16:20]     "pilotErrorCode": 0,
[2025-06-04 09:16:20]     "pilotErrorDiag": "",
[2025-06-04 09:16:20]  *** Listing of results directory ***
[2025-06-04 09:16:20] total 391156
[2025-06-04 09:16:20] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 09:16:20] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:51 queuedata.json
[2025-06-04 09:16:20] -rwx------. 1 boincer umatlas     37140 Jun  4 03:53 runpilot2-wrapper.sh
[2025-06-04 09:16:20] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:16:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:03 run_atlas
[2025-06-04 09:16:20] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:03 job.xml
[2025-06-04 09:16:20] -rw-r--r--. 2 boincer umatlas 215105114 Jun  4 08:03 EVNT.45006593._000861.pool.root.1
[2025-06-04 09:16:20] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:03 start_atlas.sh
[2025-06-04 09:16:20] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:03 shared
[2025-06-04 09:16:20] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 08:03 input.tar.gz
[2025-06-04 09:16:20] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:03 boinc_lockfile
[2025-06-04 09:16:20] -rw-r--r--. 1 boincer umatlas      2521 Jun  4 08:03 pandaJob.out
[2025-06-04 09:16:20] -rw-------. 1 boincer umatlas    986812 Jun  4 08:03 agis_schedconf.cvmfs.json
[2025-06-04 09:16:20] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:16:20] drwx------. 4 boincer umatlas      4096 Jun  4 08:03 pilot3
[2025-06-04 09:16:20] -rw-r--r--. 1 boincer umatlas      6841 Jun  4 09:09 init_data.xml
[2025-06-04 09:16:20] -rw-------. 1 boincer umatlas 180169872 Jun  4 09:15 HITS.45006595._055516.pool.root.1
[2025-06-04 09:16:20] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:15 boinc_task_state.xml
[2025-06-04 09:16:20] -rw-------. 1 boincer umatlas        95 Jun  4 09:15 pilot_heartbeat.json
[2025-06-04 09:16:20] -rw-------. 1 boincer umatlas      1034 Jun  4 09:15 memory_monitor_summary.json
[2025-06-04 09:16:20] -rw-------. 1 boincer umatlas    286225 Jun  4 09:16 log.45006595._055516.job.log.tgz.1
[2025-06-04 09:16:20] -rw-------. 1 boincer umatlas      7706 Jun  4 09:16 heartbeat.json
[2025-06-04 09:16:20] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:16 boinc_mmap_file
[2025-06-04 09:16:20] -rw-------. 1 boincer umatlas      4662 Jun  4 09:16 pilotlog.txt
[2025-06-04 09:16:20] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:16 wrapper_checkpoint.txt
[2025-06-04 09:16:20] -rw-------. 1 boincer umatlas    436315 Jun  4 09:16 log.45006595._055516.job.log.1
[2025-06-04 09:16:20] -rw-------. 1 boincer umatlas       357 Jun  4 09:16 output.list
[2025-06-04 09:16:20] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:16 runtime_log
[2025-06-04 09:16:20] -rw-------. 1 boincer umatlas    737280 Jun  4 09:16 result.tar.gz
[2025-06-04 09:16:20] -rw-------. 1 boincer umatlas       651 Jun  4 09:16 ZxcNDm76xg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1knKDmTNcp7m.diag
[2025-06-04 09:16:20] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 09:16 runtime_log.err
[2025-06-04 09:16:20] -rw-r--r--. 1 boincer umatlas     21424 Jun  4 09:16 stderr.txt
[2025-06-04 09:16:20] HITS file was successfully produced:
[2025-06-04 09:16:20] -rw-------. 1 boincer umatlas 180169872 Jun  4 09:15 shared/HITS.pool.root.1
[2025-06-04 09:16:20]  *** Contents of shared directory: ***
[2025-06-04 09:16:20] total 387256
[2025-06-04 09:16:20] -rw-r--r--. 2 boincer umatlas 215105114 Jun  4 08:03 ATLAS.root_0
[2025-06-04 09:16:20] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:03 start_atlas.sh
[2025-06-04 09:16:20] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 08:03 input.tar.gz
[2025-06-04 09:16:20] -rw-------. 1 boincer umatlas 180169872 Jun  4 09:15 HITS.pool.root.1
[2025-06-04 09:16:20] -rw-------. 1 boincer umatlas    737280 Jun  4 09:16 result.tar.gz
09:16:22 (2309067): run_atlas exited; CPU time 27999.167718
09:16:22 (2309067): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN