Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:31:29 (454155): wrapper (7.7.26015): starting
04:31:29 (454155): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 04:31:29] Arguments: --nthreads 12
[2025-06-05 04:31:29] Threads: 12
[2025-06-05 04:31:29] Checking for CVMFS
[2025-06-05 04:31:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 04:31:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 04:31:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 04:31:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 04:31:30] 2.12.7.0 3695 432 50580 146806 1 187 3135101 4096001 2718 130560 0 1252495 99.996 151940 233 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 04:31:30] CVMFS is ok
[2025-06-05 04:31:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 04:31:30] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 04:31:30] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 04:31:30] Further information can be found at the LHC@home message board.
[2025-06-05 04:31:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:31:30] Checking for apptainer binary...
[2025-06-05 04:31:30] apptainer is not installed, using version from CVMFS
[2025-06-05 04:31:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:31:30] dualxeon2
[2025-06-05 04:31:30] apptainer works
[2025-06-05 04:31:30] Set ATHENA_PROC_NUMBER=12
[2025-06-05 04:31:30] Set ATHENA_CORE_NUMBER=12
[2025-06-05 04:31:30] Starting ATLAS job with PandaID=6678390338
[2025-06-05 04:31:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 06:20:15]  *** The last 200 lines of the pilot log: ***
[2025-06-05 06:20:15] 2025-06-05 06:19:59,334 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 06:20:15] 2025-06-05 06:19:59,334 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 06:20:15] 2025-06-05 06:19:59,334 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 06:20:15] 2025-06-05 06:19:59,340 | INFO     | fitting pss+swap vs Time
[2025-06-05 06:20:15] 2025-06-05 06:19:59,340 | INFO     | sum of square deviations: 369281342.5
[2025-06-05 06:20:15] 2025-06-05 06:19:59,341 | INFO     | sum of deviations: 23496570114.000004
[2025-06-05 06:20:15] 2025-06-05 06:19:59,341 | INFO     | mean x: 1749101123.5
[2025-06-05 06:20:15] 2025-06-05 06:19:59,341 | INFO     | mean y: 2612736.5283018867
[2025-06-05 06:20:15] 2025-06-05 06:19:59,342 | INFO     | -- intersect: -111288894455.69853
[2025-06-05 06:20:15] 2025-06-05 06:19:59,342 | INFO     | intersect: -111288894455.69853
[2025-06-05 06:20:15] 2025-06-05 06:19:59,342 | INFO     | chi2: 2.1920398980566964
[2025-06-05 06:20:15] 2025-06-05 06:19:59,342 | INFO     | sum of square deviations: 319447850.0
[2025-06-05 06:20:15] 2025-06-05 06:19:59,346 | INFO     | sum of deviations: 22465533779.0
[2025-06-05 06:20:15] 2025-06-05 06:19:59,346 | INFO     | mean x: 1749100971.0
[2025-06-05 06:20:15] 2025-06-05 06:19:59,346 | INFO     | mean y: 2609577.5148514854
[2025-06-05 06:20:15] 2025-06-05 06:19:59,346 | INFO     | -- intersect: -123004907758.6707
[2025-06-05 06:20:15] 2025-06-05 06:19:59,347 | INFO     | intersect: -123004907758.6707
[2025-06-05 06:20:15] 2025-06-05 06:19:59,347 | INFO     | chi2: 2.194098282092361
[2025-06-05 06:20:15] 2025-06-05 06:19:59,347 | INFO     | current chi2=2.194098282092361 (change=-0.09390267200379471 %)
[2025-06-05 06:20:15] 2025-06-05 06:19:59,347 | INFO     | right removable region: 100
[2025-06-05 06:20:15] 2025-06-05 06:19:59,347 | INFO     | sum of square deviations: 319447850.0
[2025-06-05 06:20:15] 2025-06-05 06:19:59,348 | INFO     | sum of deviations: -192995155.0000007
[2025-06-05 06:20:15] 2025-06-05 06:19:59,352 | INFO     | mean x: 1749101276.0
[2025-06-05 06:20:15] 2025-06-05 06:19:59,352 | INFO     | mean y: 2684380.2772277226
[2025-06-05 06:20:15] 2025-06-05 06:19:59,352 | INFO     | -- intersect: 1059407948.3723612
[2025-06-05 06:20:15] 2025-06-05 06:19:59,352 | INFO     | intersect: 1059407948.3723612
[2025-06-05 06:20:15] 2025-06-05 06:19:59,352 | INFO     | chi2: 0.1350016934224081
[2025-06-05 06:20:15] 2025-06-05 06:19:59,353 | INFO     | current chi2=0.1350016934224081 (change=93.84127572029641 %)
[2025-06-05 06:20:15] 2025-06-05 06:19:59,353 | INFO     | sum of square deviations: 274312120.0
[2025-06-05 06:20:15] 2025-06-05 06:19:59,353 | INFO     | sum of deviations: -5282526952.500001
[2025-06-05 06:20:15] 2025-06-05 06:19:59,354 | INFO     | mean x: 1749101428.5
[2025-06-05 06:20:15] 2025-06-05 06:19:59,354 | INFO     | mean y: 2701283.8229166665
[2025-06-05 06:20:15] 2025-06-05 06:19:59,354 | INFO     | -- intersect: 33685775289.840233
[2025-06-05 06:20:15] 2025-06-05 06:19:59,354 | INFO     | intersect: 33685775289.840233
[2025-06-05 06:20:15] 2025-06-05 06:19:59,354 | INFO     | chi2: 0.011348879740315525
[2025-06-05 06:20:15] 2025-06-05 06:19:59,354 | INFO     | current chi2=0.011348879740315525 (change=91.59352786427212 %)
[2025-06-05 06:20:15] 2025-06-05 06:19:59,355 | INFO     | sum of square deviations: 233641590.0
[2025-06-05 06:20:15] 2025-06-05 06:19:59,355 | INFO     | sum of deviations: -4811075612.0
[2025-06-05 06:20:15] 2025-06-05 06:19:59,355 | INFO     | mean x: 1749101581.0
[2025-06-05 06:20:15] 2025-06-05 06:19:59,355 | INFO     | mean y: 2699488.923076923
[2025-06-05 06:20:15] 2025-06-05 06:19:59,356 | INFO     | -- intersect: 36019660164.71604
[2025-06-05 06:20:15] 2025-06-05 06:19:59,356 | INFO     | intersect: 36019660164.71604
[2025-06-05 06:20:15] 2025-06-05 06:19:59,356 | INFO     | chi2: 0.010795580577070947
[2025-06-05 06:20:15] 2025-06-05 06:19:59,356 | INFO     | current chi2=0.010795580577070947 (change=4.875363700251834 %)
[2025-06-05 06:20:15] 2025-06-05 06:19:59,356 | INFO     | left removable region: 30
[2025-06-05 06:20:15] 2025-06-05 06:19:59,356 | INFO     | sum of square deviations: 106336877.5
[2025-06-05 06:20:15] 2025-06-05 06:19:59,361 | INFO     | sum of deviations: -1743239425.5000002
[2025-06-05 06:20:15] 2025-06-05 06:19:59,361 | INFO     | mean x: 1749101855.5
[2025-06-05 06:20:15] 2025-06-05 06:19:59,361 | INFO     | mean y: 2686240.8714285716
[2025-06-05 06:20:15] 2025-06-05 06:19:59,361 | INFO     | -- intersect: 28676683309.50648
[2025-06-05 06:20:15] 2025-06-05 06:19:59,361 | INFO     | intersect: 28676683309.50648
[2025-06-05 06:20:15] 2025-06-05 06:19:59,362 | INFO     | chi2: 0.007968933083138443
[2025-06-05 06:20:15] 2025-06-05 06:19:59,362 | INFO     | -- intersect: 28676683309.50648
[2025-06-05 06:20:15] 2025-06-05 06:19:59,362 | INFO     | current memory leak: -16.39 B/s (using 70 data points, chi2=0.01)
[2025-06-05 06:20:15] 2025-06-05 06:19:59,363 | INFO     | ..............................
[2025-06-05 06:20:15] 2025-06-05 06:19:59,363 | INFO     | . Timing measurements:
[2025-06-05 06:20:15] 2025-06-05 06:19:59,363 | INFO     | . get job = 0 s
[2025-06-05 06:20:15] 2025-06-05 06:19:59,363 | INFO     | . initial setup = 1 s
[2025-06-05 06:20:15] 2025-06-05 06:19:59,363 | INFO     | . payload setup = 5 s
[2025-06-05 06:20:15] 2025-06-05 06:19:59,363 | INFO     | . stage-in = 0 s
[2025-06-05 06:20:15] 2025-06-05 06:19:59,363 | INFO     | . payload execution = 6450 s
[2025-06-05 06:20:15] 2025-06-05 06:19:59,363 | INFO     | . stage-out = 1 s
[2025-06-05 06:20:15] 2025-06-05 06:19:59,363 | INFO     | . log creation = 0 s
[2025-06-05 06:20:15] 2025-06-05 06:19:59,364 | INFO     | ..............................
[2025-06-05 06:20:15] 2025-06-05 06:19:59,945 | INFO     | 
[2025-06-05 06:20:15] 2025-06-05 06:19:59,945 | INFO     | job summary report
[2025-06-05 06:20:15] 2025-06-05 06:19:59,945 | INFO     | --------------------------------------------------
[2025-06-05 06:20:15] 2025-06-05 06:19:59,945 | INFO     | PanDA job id: 6678390338
[2025-06-05 06:20:15] 2025-06-05 06:19:59,946 | INFO     | task id: 45006595
[2025-06-05 06:20:15] 2025-06-05 06:19:59,946 | INFO     | errors: (none)
[2025-06-05 06:20:15] 2025-06-05 06:19:59,946 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 06:20:15] 2025-06-05 06:19:59,946 | INFO     | pilot state: finished 
[2025-06-05 06:20:15] 2025-06-05 06:19:59,946 | INFO     | transexitcode: 0
[2025-06-05 06:20:15] 2025-06-05 06:19:59,946 | INFO     | exeerrorcode: 0
[2025-06-05 06:20:15] 2025-06-05 06:19:59,946 | INFO     | exeerrordiag: 
[2025-06-05 06:20:15] 2025-06-05 06:19:59,946 | INFO     | exitcode: 0
[2025-06-05 06:20:15] 2025-06-05 06:19:59,947 | INFO     | exitmsg: OK
[2025-06-05 06:20:15] 2025-06-05 06:19:59,947 | INFO     | cpuconsumptiontime: 49991 s
[2025-06-05 06:20:15] 2025-06-05 06:19:59,947 | INFO     | nevents: 400
[2025-06-05 06:20:15] 2025-06-05 06:19:59,947 | INFO     | neventsw: 0
[2025-06-05 06:20:15] 2025-06-05 06:19:59,947 | INFO     | pid: 464605
[2025-06-05 06:20:15] 2025-06-05 06:19:59,947 | INFO     | pgrp: 464605
[2025-06-05 06:20:15] 2025-06-05 06:19:59,947 | INFO     | corecount: 12
[2025-06-05 06:20:15] 2025-06-05 06:19:59,947 | INFO     | event service: False
[2025-06-05 06:20:15] 2025-06-05 06:19:59,947 | INFO     | sizes: {0: 2397365, 3: 2397571, 11: 2397599, 6460: 2424549, 6462: 2433536, 6464: 2433592, 6488: 2433890}
[2025-06-05 06:20:15] 2025-06-05 06:19:59,948 | INFO     | --------------------------------------------------
[2025-06-05 06:20:15] 2025-06-05 06:19:59,948 | INFO     | 
[2025-06-05 06:20:15] 2025-06-05 06:19:59,948 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/5
[2025-06-05 06:20:15] 2025-06-05 06:19:59,982 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 06:20:15] 2025-06-05 06:19:59,983 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 06:20:15] 2025-06-05 06:19:59,983 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 06:20:15] 2025-06-05 06:19:59,983 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 06:20:15] 2025-06-05 06:19:59,983 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 06:20:15] 2025-06-05 06:19:59,983 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 06:20:15] 2025-06-05 06:19:59,984 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 06:20:15] 2025-06-05 06:19:59,984 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 06:20:15] 2025-06-05 06:19:59,984 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 06:20:15] 2025-06-05 06:19:59,984 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 06:20:15] 2025-06-05 06:19:59,984 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 06:20:15] 2025-06-05 06:19:59,984 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 06:20:15] 2025-06-05 06:19:59,984 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 06:20:15] 2025-06-05 06:19:59,984 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 06:20:15] 2025-06-05 06:19:59,985 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 06:20:15] 2025-06-05 06:19:59,985 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 06:20:15] 2025-06-05 06:19:59,985 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 06:20:15] 2025-06-05 06:19:59,985 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 06:20:15] 2025-06-05 06:19:59,985 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 06:20:15] 2025-06-05 06:19:59,985 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 06:20:15] 2025-06-05 06:19:59,985 | INFO     | job 6678390338 has completed (purged errors)
[2025-06-05 06:20:15] 2025-06-05 06:19:59,989 | INFO     | overall cleanup function is called
[2025-06-05 06:20:15] 2025-06-05 06:20:01,003 | INFO     | --- collectZombieJob: --- 10, [464605]
[2025-06-05 06:20:15] 2025-06-05 06:20:01,003 | INFO     | zombie collector waiting for pid 464605
[2025-06-05 06:20:15] 2025-06-05 06:20:01,005 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 06:20:15] 2025-06-05 06:20:01,005 | INFO     | collected zombie processes
[2025-06-05 06:20:15] 2025-06-05 06:20:01,005 | INFO     | will attempt to kill all subprocesses of pid=464605
[2025-06-05 06:20:15] 2025-06-05 06:20:01,305 | INFO     | process IDs to be killed: [464605] (in reverse order)
[2025-06-05 06:20:15] 2025-06-05 06:20:01,407 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 06:20:15] 2025-06-05 06:20:01,407 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 06:20:15] 2025-06-05 06:20:01,416 | INFO     | did not find any defunct processes belonging to 464605
[2025-06-05 06:20:15] 2025-06-05 06:20:01,424 | INFO     | did not find any defunct processes belonging to 464605
[2025-06-05 06:20:15] 2025-06-05 06:20:01,424 | INFO     | ready for new job
[2025-06-05 06:20:15] 2025-06-05 06:20:01,424 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 06:20:15] 2025-06-05 06:20:01,429 | INFO     | **************************************
[2025-06-05 06:20:15] 2025-06-05 06:20:01,429 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 06:20:15] 2025-06-05 06:20:01,429 | INFO     | **************************************
[2025-06-05 06:20:15] 2025-06-05 06:20:01,429 | INFO     | 
[2025-06-05 06:20:15] 2025-06-05 06:20:01,431 | INFO     | architecture information:
[2025-06-05 06:20:15] 2025-06-05 06:20:01,438 | INFO     | executing command: cat /etc/os-release
[2025-06-05 06:20:15] 2025-06-05 06:20:01,463 | INFO     | cat /etc/os-release:
[2025-06-05 06:20:15] NAME="CentOS Linux"
[2025-06-05 06:20:15] VERSION="7 (Core)"
[2025-06-05 06:20:15] ID="centos"
[2025-06-05 06:20:15] ID_LIKE="rhel fedora"
[2025-06-05 06:20:15] VERSION_ID="7"
[2025-06-05 06:20:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 06:20:15] ANSI_COLOR="0;31"
[2025-06-05 06:20:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 06:20:15] HOME_URL="https://www.centos.org/"
[2025-06-05 06:20:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 06:20:15] 
[2025-06-05 06:20:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 06:20:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 06:20:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 06:20:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 06:20:15] 
[2025-06-05 06:20:15] 2025-06-05 06:20:01,464 | INFO     | **************************************
[2025-06-05 06:20:15] 2025-06-05 06:20:01,967 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/5
[2025-06-05 06:20:15] 2025-06-05 06:20:01,994 | INFO     | sufficient remaining disk space (83000033280 B)
[2025-06-05 06:20:15] 2025-06-05 06:20:01,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 06:20:15] 2025-06-05 06:20:01,994 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 06:20:15] 2025-06-05 06:20:01,994 | INFO     | update_server=False
[2025-06-05 06:20:15] 2025-06-05 06:20:01,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 06:20:15] 2025-06-05 06:20:02,124 | INFO     | all payload control threads have been joined
[2025-06-05 06:20:15] 2025-06-05 06:20:02,386 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 06:20:15] 2025-06-05 06:20:02,386 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 06:20:15] 2025-06-05 06:20:02,386 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:20:15] 2025-06-05 06:20:02,386 | INFO     | will abort loop
[2025-06-05 06:20:15] 2025-06-05 06:20:02,442 | INFO     | all job control threads have been joined
[2025-06-05 06:20:15] 2025-06-05 06:20:02,448 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 06:20:15] 2025-06-05 06:20:02,848 | INFO     | PID=457910 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-05 06:20:15] 2025-06-05 06:20:02,848 | INFO     | .. there are 4 such processes running
[2025-06-05 06:20:15] 2025-06-05 06:20:02,848 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 06:20:15] 2025-06-05 06:20:02,848 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 06:20:15] 2025-06-05 06:20:02,849 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 06:20:15] 2025-06-05 06:20:02,885 | INFO     | all data control threads have been joined
[2025-06-05 06:20:15] 2025-06-05 06:20:03,000 | INFO     | [job] retrieve thread has finished
[2025-06-05 06:20:15] 2025-06-05 06:20:03,129 | INFO     | [payload] control thread has finished
[2025-06-05 06:20:15] 2025-06-05 06:20:03,214 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 06:20:15] 2025-06-05 06:20:03,391 | INFO     | [job] job monitor thread has finished
[2025-06-05 06:20:15] 2025-06-05 06:20:03,447 | INFO     | [job] control thread has finished
[2025-06-05 06:20:15] 2025-06-05 06:20:03,704 | INFO     | [payload] validate_post thread has finished
[2025-06-05 06:20:15] 2025-06-05 06:20:03,890 | INFO     | [data] control thread has finished
[2025-06-05 06:20:15] 2025-06-05 06:20:03,953 | INFO     | [job] validate thread has finished
[2025-06-05 06:20:15] 2025-06-05 06:20:04,167 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 06:20:15] 2025-06-05 06:20:04,358 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 06:20:15] 2025-06-05 06:20:04,358 | INFO     | [data] copytool_in thread has finished
[2025-06-05 06:20:15] 2025-06-05 06:20:04,362 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 06:20:15] 2025-06-05 06:20:04,453 | INFO     | [data] copytool_out thread has finished
[2025-06-05 06:20:15] 2025-06-05 06:20:04,513 | INFO     | [payload] failed_post thread has finished
[2025-06-05 06:20:15] 2025-06-05 06:20:04,562 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 06:20:15] 2025-06-05 06:20:04,608 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:20:15] 2025-06-05 06:20:05,613 | INFO     | [job] queue monitor thread has finished
[2025-06-05 06:20:15] 2025-06-05 06:20:08,567 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 06:20:15] 2025-06-05 06:20:10,336 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135320045201216)>', '<ExcThread(monitor, started 135319672297216)>']
[2025-06-05 06:20:15] 2025-06-05 06:20:10,890 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 06:20:15] 2025-06-05 06:20:10,890 | INFO     | [monitor] control thread has ended
[2025-06-05 06:20:15] 2025-06-05 06:20:15,361 | INFO     | all workflow threads have been joined
[2025-06-05 06:20:15] 2025-06-05 06:20:15,361 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 06:20:15] 2025-06-05 06:20:15,361 | INFO     | traces error code: 0
[2025-06-05 06:20:15] 2025-06-05 06:20:15,362 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 06:20:15] 2025-06-05 06:20:15,549 [wrapper] ==== pilot stdout END ====
[2025-06-05 06:20:15] 2025-06-05 06:20:15,555 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 06:20:15] 2025-06-05 06:20:15,561 [wrapper] pilotpid: 457910
[2025-06-05 06:20:15] 2025-06-05 06:20:15,567 [wrapper] Pilot exit status: 0
[2025-06-05 06:20:15] 2025-06-05 06:20:15,588 [wrapper] pandaids: 6678390338
[2025-06-05 06:20:15] 2025-06-05 06:20:15,658 [wrapper] cleanup supervisor_pilot  556458 457911
[2025-06-05 06:20:15] 2025-06-05 06:20:15,664 [wrapper] Test setup, not cleaning
[2025-06-05 06:20:15] 2025-06-05 06:20:15,670 [wrapper] apfmon messages muted
[2025-06-05 06:20:15] 2025-06-05 06:20:15,679 [wrapper] ==== wrapper stdout END ====
[2025-06-05 06:20:15] 2025-06-05 06:20:15,684 [wrapper] ==== wrapper stderr END ====
[2025-06-05 06:20:15]  *** Error codes and diagnostics ***
[2025-06-05 06:20:15]     "exeErrorCode": 0,
[2025-06-05 06:20:15]     "exeErrorDiag": "",
[2025-06-05 06:20:15]     "pilotErrorCode": 0,
[2025-06-05 06:20:15]     "pilotErrorDiag": "",
[2025-06-05 06:20:15]  *** Listing of results directory ***
[2025-06-05 06:20:15] total 399056
[2025-06-05 06:20:15] -rw-r--r-- 1 boinc boinc    495897 Jun  4 07:04 pilot3.tar.gz
[2025-06-05 06:20:15] -rwx------ 1 boinc boinc     37140 Jun  4 07:27 runpilot2-wrapper.sh
[2025-06-05 06:20:15] -rw-r--r-- 1 boinc boinc      5111 Jun  4 07:27 queuedata.json
[2025-06-05 06:20:15] -rw-rw-r-- 1 boinc boinc       100 Jun  5 04:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 06:20:15] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 04:31 run_atlas
[2025-06-05 06:20:15] -rw-rw-r-- 1 boinc boinc       105 Jun  5 04:31 job.xml
[2025-06-05 06:20:15] -rw-rw-r-- 1 boinc boinc      6597 Jun  5 04:31 init_data.xml
[2025-06-05 06:20:15] -rw-r--r-- 2 boinc boinc 218450694 Jun  5 04:31 EVNT.45006593._002192.pool.root.1
[2025-06-05 06:20:15] -rw-r--r-- 2 boinc boinc     15093 Jun  5 04:31 start_atlas.sh
[2025-06-05 06:20:15] drwxrwx--x 2 boinc boinc      4096 Jun  5 04:31 shared
[2025-06-05 06:20:15] -rw-r--r-- 2 boinc boinc    508888 Jun  5 04:31 input.tar.gz
[2025-06-05 06:20:15] -rw-rw-r-- 1 boinc boinc         0 Jun  5 04:31 boinc_lockfile
[2025-06-05 06:20:15] -rw-rw-r-- 1 boinc boinc      2525 Jun  5 04:31 pandaJob.out
[2025-06-05 06:20:15] -rw------- 1 boinc boinc    987109 Jun  5 04:31 agis_schedconf.cvmfs.json
[2025-06-05 06:20:15] -rw------- 1 boinc boinc   1598969 Jun  5 04:31 agis_ddmendpoints.agis.ALL.json
[2025-06-05 06:20:15] drwx------ 4 boinc boinc      4096 Jun  5 04:31 pilot3
[2025-06-05 06:20:15] -rw------- 1 boinc boinc 184299760 Jun  5 06:18 HITS.45006595._054789.pool.root.1
[2025-06-05 06:20:15] -rw-rw-r-- 1 boinc boinc       529 Jun  5 06:18 boinc_task_state.xml
[2025-06-05 06:20:15] -rw------- 1 boinc boinc      1022 Jun  5 06:19 memory_monitor_summary.json
[2025-06-05 06:20:15] -rw------- 1 boinc boinc    384619 Jun  5 06:19 log.45006595._054789.job.log.tgz.1
[2025-06-05 06:20:15] -rw------- 1 boinc boinc        95 Jun  5 06:19 pilot_heartbeat.json
[2025-06-05 06:20:15] -rw------- 1 boinc boinc      7671 Jun  5 06:19 heartbeat.json
[2025-06-05 06:20:15] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 06:20 boinc_mmap_file
[2025-06-05 06:20:15] -rw-rw-r-- 1 boinc boinc        27 Jun  5 06:20 wrapper_checkpoint.txt
[2025-06-05 06:20:15] -rw------- 1 boinc boinc      4955 Jun  5 06:20 pilotlog.txt
[2025-06-05 06:20:15] -rw------- 1 boinc boinc    642545 Jun  5 06:20 log.45006595._054789.job.log.1
[2025-06-05 06:20:15] -rw------- 1 boinc boinc       357 Jun  5 06:20 output.list
[2025-06-05 06:20:15] -rw-rw-r-- 1 boinc boinc       620 Jun  5 06:20 runtime_log
[2025-06-05 06:20:15] -rw------- 1 boinc boinc   1044480 Jun  5 06:20 result.tar.gz
[2025-06-05 06:20:15] -rw-rw-r-- 1 boinc boinc      8968 Jun  5 06:20 runtime_log.err
[2025-06-05 06:20:15] -rw------- 1 boinc boinc       653 Jun  5 06:20 R7OMDmKixg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmJuaKDmk1gVVm.diag
[2025-06-05 06:20:15] -rw-rw-r-- 1 boinc boinc     21024 Jun  5 06:20 stderr.txt
[2025-06-05 06:20:15] HITS file was successfully produced:
[2025-06-05 06:20:15] -rw------- 1 boinc boinc 184299760 Jun  5 06:18 shared/HITS.pool.root.1
[2025-06-05 06:20:15]  *** Contents of shared directory: ***
[2025-06-05 06:20:15] total 394860
[2025-06-05 06:20:15] -rw-r--r-- 2 boinc boinc 218450694 Jun  5 04:31 ATLAS.root_0
[2025-06-05 06:20:15] -rw-r--r-- 2 boinc boinc     15093 Jun  5 04:31 start_atlas.sh
[2025-06-05 06:20:15] -rw-r--r-- 2 boinc boinc    508888 Jun  5 04:31 input.tar.gz
[2025-06-05 06:20:15] -rw------- 1 boinc boinc 184299760 Jun  5 06:18 HITS.pool.root.1
[2025-06-05 06:20:15] -rw------- 1 boinc boinc   1044480 Jun  5 06:20 result.tar.gz
06:20:17 (454155): run_atlas exited; CPU time 50084.973515
06:20:17 (454155): called boinc_finish(0)

</stderr_txt>
]]>

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