Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:06:36 (171756): wrapper (7.7.26015): starting
08:06:36 (171756): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 08:06:36] Arguments: --nthreads 9
[2025-06-04 08:06:36] Threads: 9
[2025-06-04 08:06:36] Checking for CVMFS
[2025-06-04 08:06:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:06:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:06:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:06:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:06:36] 2.11.2.0 5563 28761 237272 146779 2 194 12859606 18432001 5695 130560 0 68394106 99.446 72502813 29230 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 08:06:36] CVMFS is ok
[2025-06-04 08:06:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:06:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:06:36] Further information can be found at the LHC@home message board.
[2025-06-04 08:06:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:06:36] Checking for apptainer binary...
[2025-06-04 08:06:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:06:36] Running /usr/bin/apptainer --version
[2025-06-04 08:06:36] apptainer version 1.3.2-1.el7
[2025-06-04 08:06:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:06:37] c-210-35-2.aglt2.org
[2025-06-04 08:06:37] apptainer works
[2025-06-04 08:06:37] Set ATHENA_PROC_NUMBER=9
[2025-06-04 08:06:37] Set ATHENA_CORE_NUMBER=9
[2025-06-04 08:06:37] Starting ATLAS job with PandaID=6678391495
[2025-06-04 08:06:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:09:04]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:09:04]  is_tar=False
[2025-06-04 09:09:04]  lfn=log.45006595._054857.job.log.tgz.1
[2025-06-04 09:09:04]  mtime=0
[2025-06-04 09:09:04]  protocol_id=None
[2025-06-04 09:09:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:09:04]  replicas=None
[2025-06-04 09:09:04]  scope=mc23_13p6TeV
[2025-06-04 09:09:04]  status=None
[2025-06-04 09:09:04]  status_code=0
[2025-06-04 09:09:04]  storage_token=
[2025-06-04 09:09:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678391495/log.45006595._054857.job.log.tgz.1
[2025-06-04 09:09:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/a0/log.45006595._054857.job.log.tgz.1
[2025-06-04 09:09:04]  workdir=None
[2025-06-04 09:09:04] ]
[2025-06-04 09:09:04] 2025-06-04 13:08:34,091 | INFO     | transferring file log.45006595._054857.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678391495/log.45006595._054857.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:09:04] 2025-06-04 13:08:34,091 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678391495/log.45006595._054857.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._054857.job
[2025-06-04 09:09:04] 2025-06-04 13:08:34,120 | INFO     | adding to output.list: log.45006595._054857.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/a0/log.45006595._054857.job.log.tg
[2025-06-04 09:09:04] 2025-06-04 13:08:34,121 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:09:04] 2025-06-04 13:08:34,121 | INFO     | summary of transferred files:
[2025-06-04 09:09:04] 2025-06-04 13:08:34,121 | INFO     |  -- lfn=log.45006595._054857.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:09:04] 2025-06-04 13:08:34,121 | INFO     | stage-out finished correctly
[2025-06-04 09:09:04] 2025-06-04 13:08:34,172 | INFO     | monitor loop #281: job 0:6678391495 is in state 'finished'
[2025-06-04 09:09:04] 2025-06-04 13:08:34,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:09:04] 2025-06-04 13:08:36,592 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:09:04] 2025-06-04 13:08:36,678 | INFO     | monitor loop #282: job 0:6678391495 is in state 'finished'
[2025-06-04 09:09:04] 2025-06-04 13:08:36,678 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:09:04] 2025-06-04 13:08:39,181 | INFO     | monitor loop #283: job 0:6678391495 is in state 'finished'
[2025-06-04 09:09:04] 2025-06-04 13:08:39,181 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:09:04] 2025-06-04 13:08:39,633 | INFO     | job 6678391495 has state=finished
[2025-06-04 09:09:04] 2025-06-04 13:08:39,634 | INFO     | preparing for final server update for job 6678391495 in state='finished'
[2025-06-04 09:09:04] 2025-06-04 13:08:39,690 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 09:09:04] 2025-06-04 13:08:39,690 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:09:04] 2025-06-04 13:08:39,690 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:09:04] 2025-06-04 13:08:39,690 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:09:04] 2025-06-04 13:08:39,690 | INFO     | job 6678391495 has finished - writing final server update
[2025-06-04 09:09:04] 2025-06-04 13:08:39,690 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:09:04] 2025-06-04 13:08:39,693 | INFO     | executing command: lscpu
[2025-06-04 09:09:04] 2025-06-04 13:08:39,749 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:09:04] 2025-06-04 13:08:41,684 | INFO     | monitor loop #284: job 0:6678391495 is in state 'finished'
[2025-06-04 09:09:04] 2025-06-04 13:08:41,685 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:09:04] 2025-06-04 13:08:43,936 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:09:04] 2025-06-04 13:08:43,937 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678391495/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:09:04] 2025-06-04 13:08:43,938 | INFO     | extracted standard info from prmon json
[2025-06-04 09:09:04] 2025-06-04 13:08:43,938 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:09:04] 2025-06-04 13:08:43,938 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:09:04] 2025-06-04 13:08:43,938 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:09:04] 2025-06-04 13:08:43,939 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:09:04] 2025-06-04 13:08:43,941 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:09:04] 2025-06-04 13:08:43,941 | INFO     | sum of square deviations: 48810217.5
[2025-06-04 09:09:04] 2025-06-04 13:08:43,942 | INFO     | sum of deviations: -252146397.5
[2025-06-04 09:09:04] 2025-06-04 13:08:43,942 | INFO     | mean x: 1749040755.5
[2025-06-04 09:09:04] 2025-06-04 13:08:43,942 | INFO     | mean y: 2530586.796296296
[2025-06-04 09:09:04] 2025-06-04 13:08:43,942 | INFO     | -- intersect: 9037817626.441292
[2025-06-04 09:09:04] 2025-06-04 13:08:43,942 | INFO     | intersect: 9037817626.441292
[2025-06-04 09:09:04] 2025-06-04 13:08:43,943 | INFO     | chi2: 0.0026771245242326464
[2025-06-04 09:09:04] 2025-06-04 13:08:43,943 | INFO     | -- intersect: 9037817626.441292
[2025-06-04 09:09:04] 2025-06-04 13:08:43,943 | INFO     | current memory leak: -5.17 B/s (using 54 data points, chi2=0.00)
[2025-06-04 09:09:04] 2025-06-04 13:08:43,943 | INFO     | ..............................
[2025-06-04 09:09:04] 2025-06-04 13:08:43,944 | INFO     | . Timing measurements:
[2025-06-04 09:09:04] 2025-06-04 13:08:43,944 | INFO     | . get job = 0 s
[2025-06-04 09:09:04] 2025-06-04 13:08:43,944 | INFO     | . initial setup = 2 s
[2025-06-04 09:09:04] 2025-06-04 13:08:43,944 | INFO     | . payload setup = 6 s
[2025-06-04 09:09:04] 2025-06-04 13:08:43,944 | INFO     | . stage-in = 0 s
[2025-06-04 09:09:04] 2025-06-04 13:08:43,944 | INFO     | . payload execution = 3680 s
[2025-06-04 09:09:04] 2025-06-04 13:08:43,944 | INFO     | . stage-out = 0 s
[2025-06-04 09:09:04] 2025-06-04 13:08:43,944 | INFO     | . log creation = 0 s
[2025-06-04 09:09:04] 2025-06-04 13:08:43,945 | INFO     | ..............................
[2025-06-04 09:09:04] 2025-06-04 13:08:44,324 | INFO     | 
[2025-06-04 09:09:04] 2025-06-04 13:08:44,325 | INFO     | job summary report
[2025-06-04 09:09:04] 2025-06-04 13:08:44,325 | INFO     | --------------------------------------------------
[2025-06-04 09:09:04] 2025-06-04 13:08:44,325 | INFO     | PanDA job id: 6678391495
[2025-06-04 09:09:04] 2025-06-04 13:08:44,325 | INFO     | task id: 45006595
[2025-06-04 09:09:04] 2025-06-04 13:08:44,325 | INFO     | errors: (none)
[2025-06-04 09:09:04] 2025-06-04 13:08:44,325 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:09:04] 2025-06-04 13:08:44,325 | INFO     | pilot state: finished 
[2025-06-04 09:09:04] 2025-06-04 13:08:44,325 | INFO     | transexitcode: 0
[2025-06-04 09:09:04] 2025-06-04 13:08:44,325 | INFO     | exeerrorcode: 0
[2025-06-04 09:09:04] 2025-06-04 13:08:44,325 | INFO     | exeerrordiag: 
[2025-06-04 09:09:04] 2025-06-04 13:08:44,325 | INFO     | exitcode: 0
[2025-06-04 09:09:04] 2025-06-04 13:08:44,325 | INFO     | exitmsg: OK
[2025-06-04 09:09:04] 2025-06-04 13:08:44,325 | INFO     | cpuconsumptiontime: 30841 s
[2025-06-04 09:09:04] 2025-06-04 13:08:44,325 | INFO     | nevents: 400
[2025-06-04 09:09:04] 2025-06-04 13:08:44,325 | INFO     | neventsw: 0
[2025-06-04 09:09:04] 2025-06-04 13:08:44,326 | INFO     | pid: 181828
[2025-06-04 09:09:04] 2025-06-04 13:08:44,326 | INFO     | pgrp: 181828
[2025-06-04 09:09:04] 2025-06-04 13:08:44,326 | INFO     | corecount: 9
[2025-06-04 09:09:04] 2025-06-04 13:08:44,326 | INFO     | event service: False
[2025-06-04 09:09:04] 2025-06-04 13:08:44,326 | INFO     | sizes: {0: 2397342, 4: 2397548, 11: 2397576, 3691: 2423363, 3692: 2432359, 3695: 2432359, 3702: 2432657}
[2025-06-04 09:09:04] 2025-06-04 13:08:44,326 | INFO     | --------------------------------------------------
[2025-06-04 09:09:04] 2025-06-04 13:08:44,326 | INFO     | 
[2025-06-04 09:09:04] 2025-06-04 13:08:44,326 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 09:09:04] 2025-06-04 13:08:44,356 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:09:04] 2025-06-04 13:08:44,356 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:09:04] 2025-06-04 13:08:44,356 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:09:04] 2025-06-04 13:08:44,357 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:09:04] 2025-06-04 13:08:44,357 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:09:04] 2025-06-04 13:08:44,357 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:09:04] 2025-06-04 13:08:44,357 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:09:04] 2025-06-04 13:08:44,357 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:09:04] 2025-06-04 13:08:44,357 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:09:04] 2025-06-04 13:08:44,357 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:09:04] 2025-06-04 13:08:44,357 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:09:04] 2025-06-04 13:08:44,357 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:09:04] 2025-06-04 13:08:44,357 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:09:04] 2025-06-04 13:08:44,357 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:09:04] 2025-06-04 13:08:44,357 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:09:04] 2025-06-04 13:08:44,357 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:09:04] 2025-06-04 13:08:44,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:09:04] 2025-06-04 13:08:44,357 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:09:04] 2025-06-04 13:08:44,358 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:09:04] 2025-06-04 13:08:44,358 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:09:04] 2025-06-04 13:08:44,358 | INFO     | job 6678391495 has completed (purged errors)
[2025-06-04 09:09:04] 2025-06-04 13:08:44,358 | INFO     | overall cleanup function is called
[2025-06-04 09:09:04] 2025-06-04 13:08:45,367 | INFO     | --- collectZombieJob: --- 10, [181828]
[2025-06-04 09:09:04] 2025-06-04 13:08:45,368 | INFO     | zombie collector waiting for pid 181828
[2025-06-04 09:09:04] 2025-06-04 13:08:45,368 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:09:04] 2025-06-04 13:08:45,368 | INFO     | collected zombie processes
[2025-06-04 09:09:04] 2025-06-04 13:08:45,368 | INFO     | will attempt to kill all subprocesses of pid=181828
[2025-06-04 09:09:04] 2025-06-04 13:08:45,516 | INFO     | process IDs to be killed: [181828] (in reverse order)
[2025-06-04 09:09:04] 2025-06-04 13:08:45,578 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:09:04] 2025-06-04 13:08:45,578 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:09:04] 2025-06-04 13:08:45,582 | INFO     | did not find any defunct processes belonging to 181828
[2025-06-04 09:09:04] 2025-06-04 13:08:45,586 | INFO     | did not find any defunct processes belonging to 181828
[2025-06-04 09:09:04] 2025-06-04 13:08:45,586 | INFO     | ready for new job
[2025-06-04 09:09:04] 2025-06-04 13:08:45,586 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:09:04] 2025-06-04 13:08:45,587 | INFO     | **************************************
[2025-06-04 09:09:04] 2025-06-04 13:08:45,588 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:09:04] 2025-06-04 13:08:45,588 | INFO     | **************************************
[2025-06-04 09:09:04] 2025-06-04 13:08:45,588 | INFO     | 
[2025-06-04 09:09:04] 2025-06-04 13:08:45,590 | INFO     | architecture information:
[2025-06-04 09:09:04] 2025-06-04 13:08:45,590 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:09:04] 2025-06-04 13:08:45,609 | INFO     | cat /etc/os-release:
[2025-06-04 09:09:04] NAME="CentOS Linux"
[2025-06-04 09:09:04] VERSION="7 (Core)"
[2025-06-04 09:09:04] ID="centos"
[2025-06-04 09:09:04] ID_LIKE="rhel fedora"
[2025-06-04 09:09:04] VERSION_ID="7"
[2025-06-04 09:09:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:09:04] ANSI_COLOR="0;31"
[2025-06-04 09:09:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:09:04] HOME_URL="https://www.centos.org/"
[2025-06-04 09:09:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:09:04] 
[2025-06-04 09:09:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:09:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:09:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:09:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:09:04] 
[2025-06-04 09:09:04] 2025-06-04 13:08:45,609 | INFO     | **************************************
[2025-06-04 09:09:04] 2025-06-04 13:08:46,112 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 09:09:04] 2025-06-04 13:08:46,134 | INFO     | sufficient remaining disk space (56433311744 B)
[2025-06-04 09:09:04] 2025-06-04 13:08:46,135 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:09:04] 2025-06-04 13:08:46,135 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:09:04] 2025-06-04 13:08:46,135 | INFO     | update_server=False
[2025-06-04 09:09:04] 2025-06-04 13:08:46,135 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:09:04] 2025-06-04 13:08:46,135 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:09:04] 2025-06-04 13:08:46,136 | INFO     | aborting loop
[2025-06-04 09:09:04] 2025-06-04 13:08:46,449 | INFO     | all payload control threads have been joined
[2025-06-04 09:09:04] 2025-06-04 13:08:46,463 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:09:04] 2025-06-04 13:08:46,463 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:09:04] 2025-06-04 13:08:46,463 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:09:04] 2025-06-04 13:08:46,749 | INFO     | all data control threads have been joined
[2025-06-04 09:09:04] 2025-06-04 13:08:47,140 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:09:04] 2025-06-04 13:08:47,140 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:09:04] 2025-06-04 13:08:47,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:09:04] 2025-06-04 13:08:47,187 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:09:04] 2025-06-04 13:08:47,211 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:09:04] 2025-06-04 13:08:47,365 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:09:04] 2025-06-04 13:08:47,454 | INFO     | [payload] control thread has finished
[2025-06-04 09:09:04] 2025-06-04 13:08:47,505 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:09:04] 2025-06-04 13:08:47,621 | INFO     | all job control threads have been joined
[2025-06-04 09:09:04] 2025-06-04 13:08:47,754 | INFO     | [data] control thread has finished
[2025-06-04 09:09:04] 2025-06-04 13:08:47,883 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:09:04] 2025-06-04 13:08:48,330 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:09:04] 2025-06-04 13:08:48,378 | INFO     | [job] validate thread has finished
[2025-06-04 09:09:04] 2025-06-04 13:08:48,527 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:09:04] 2025-06-04 13:08:48,627 | INFO     | [job] control thread has finished
[2025-06-04 09:09:04] 2025-06-04 13:08:49,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:09:04] 2025-06-04 13:08:49,221 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:09:04] 2025-06-04 13:08:50,010 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:09:04] 2025-06-04 13:08:51,158 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:09:04] 2025-06-04 13:08:56,319 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:09:04] 2025-06-04 13:08:57,323 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:09:04] 2025-06-04 13:08:59,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140125103179584)>', '<ExcThread(monitor, started 140124448880384)>']
[2025-06-04 09:09:04] 2025-06-04 13:08:59,524 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:09:04] 2025-06-04 13:08:59,524 | INFO     | [monitor] control thread has ended
[2025-06-04 09:09:04] 2025-06-04 13:09:04,239 | INFO     | all workflow threads have been joined
[2025-06-04 09:09:04] 2025-06-04 13:09:04,239 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:09:04] 2025-06-04 13:09:04,240 | INFO     | traces error code: 0
[2025-06-04 09:09:04] 2025-06-04 13:09:04,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:09:04] 2025-06-04 13:09:04,356 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:09:04] 2025-06-04 13:09:04,361 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:09:04] 2025-06-04 13:09:04,366 [wrapper] pilotpid: 175359
[2025-06-04 09:09:04] 2025-06-04 13:09:04,370 [wrapper] Pilot exit status: 0
[2025-06-04 09:09:04] 2025-06-04 13:09:04,387 [wrapper] pandaids: 6678391495
[2025-06-04 09:09:04] 2025-06-04 13:09:04,439 [wrapper] cleanup supervisor_pilot 263805 175360
[2025-06-04 09:09:04] 2025-06-04 13:09:04,443 [wrapper] Test setup, not cleaning
[2025-06-04 09:09:04] 2025-06-04 13:09:04,446 [wrapper] apfmon messages muted
[2025-06-04 09:09:04] 2025-06-04 13:09:04,449 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:09:04] 2025-06-04 13:09:04,453 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:09:04]  *** Error codes and diagnostics ***
[2025-06-04 09:09:04]     "exeErrorCode": 0,
[2025-06-04 09:09:04]     "exeErrorDiag": "",
[2025-06-04 09:09:04]     "pilotErrorCode": 0,
[2025-06-04 09:09:04]     "pilotErrorDiag": "",
[2025-06-04 09:09:04]  *** Listing of results directory ***
[2025-06-04 09:09:04] total 389392
[2025-06-04 09:09:04] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:04 pilot3.tar.gz
[2025-06-04 09:09:04] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:29 queuedata.json
[2025-06-04 09:09:04] -rwx------ 1 boincer umatlas     37140 Jun  4 03:31 runpilot2-wrapper.sh
[2025-06-04 09:09:04] -rw-r--r-- 1 boincer umatlas       100 Jun  4 08:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:09:04] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 08:06 run_atlas
[2025-06-04 09:09:04] -rw-r--r-- 1 boincer umatlas       105 Jun  4 08:06 job.xml
[2025-06-04 09:09:04] -rw-r--r-- 2 boincer umatlas 216230637 Jun  4 08:06 EVNT.45006593._002195.pool.root.1
[2025-06-04 09:09:04] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:06 start_atlas.sh
[2025-06-04 09:09:04] drwxrwx--x 2 boincer umatlas      4096 Jun  4 08:06 shared
[2025-06-04 09:09:04] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 08:06 input.tar.gz
[2025-06-04 09:09:04] -rw-r--r-- 1 boincer umatlas         0 Jun  4 08:06 boinc_lockfile
[2025-06-04 09:09:04] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 08:06 pandaJob.out
[2025-06-04 09:09:04] -rw------- 1 boincer umatlas    986812 Jun  4 08:06 agis_schedconf.cvmfs.json
[2025-06-04 09:09:04] -rw------- 1 boincer umatlas   1598969 Jun  4 08:06 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:09:04] drwx------ 4 boincer umatlas      4096 Jun  4 08:06 pilot3
[2025-06-04 09:09:04] -rw-r--r-- 1 boincer umatlas      6266 Jun  4 09:04 init_data.xml
[2025-06-04 09:09:04] -rw------- 1 boincer umatlas 177306686 Jun  4 09:08 HITS.45006595._054857.pool.root.1
[2025-06-04 09:09:04] -rw-r--r-- 1 boincer umatlas       529 Jun  4 09:08 boinc_task_state.xml
[2025-06-04 09:09:04] -rw------- 1 boincer umatlas      1041 Jun  4 09:08 memory_monitor_summary.json
[2025-06-04 09:09:04] -rw------- 1 boincer umatlas    304069 Jun  4 09:08 log.45006595._054857.job.log.tgz.1
[2025-06-04 09:09:04] -rw------- 1 boincer umatlas        95 Jun  4 09:08 pilot_heartbeat.json
[2025-06-04 09:09:04] -rw------- 1 boincer umatlas      7740 Jun  4 09:08 heartbeat.json
[2025-06-04 09:09:04] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 09:08 boinc_mmap_file
[2025-06-04 09:09:04] -rw-r--r-- 1 boincer umatlas        27 Jun  4 09:08 wrapper_checkpoint.txt
[2025-06-04 09:09:04] -rw------- 1 boincer umatlas      4425 Jun  4 09:09 pilotlog.txt
[2025-06-04 09:09:04] -rw------- 1 boincer umatlas    380364 Jun  4 09:09 log.45006595._054857.job.log.1
[2025-06-04 09:09:04] -rw------- 1 boincer umatlas       357 Jun  4 09:09 output.list
[2025-06-04 09:09:04] -rw-r--r-- 1 boincer umatlas       620 Jun  4 09:09 runtime_log
[2025-06-04 09:09:04] -rw------- 1 boincer umatlas    706560 Jun  4 09:09 result.tar.gz
[2025-06-04 09:09:04] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 09:09 runtime_log.err
[2025-06-04 09:09:04] -rw------- 1 boincer umatlas       657 Jun  4 09:09 rQwKDmPmxg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm7uaKDmvcyoMm.diag
[2025-06-04 09:09:04] -rw-r--r-- 1 boincer umatlas     21458 Jun  4 09:09 stderr.txt
[2025-06-04 09:09:04] HITS file was successfully produced:
[2025-06-04 09:09:04] -rw------- 1 boincer umatlas 177306686 Jun  4 09:08 shared/HITS.pool.root.1
[2025-06-04 09:09:04]  *** Contents of shared directory: ***
[2025-06-04 09:09:04] total 385528
[2025-06-04 09:09:04] -rw-r--r-- 2 boincer umatlas 216230637 Jun  4 08:06 ATLAS.root_0
[2025-06-04 09:09:04] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:06 start_atlas.sh
[2025-06-04 09:09:04] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 08:06 input.tar.gz
[2025-06-04 09:09:04] -rw------- 1 boincer umatlas 177306686 Jun  4 09:08 HITS.pool.root.1
[2025-06-04 09:09:04] -rw------- 1 boincer umatlas    706560 Jun  4 09:09 result.tar.gz
09:09:06 (171756): run_atlas exited; CPU time 30841.174511
09:09:06 (171756): called boinc_finish(0)

</stderr_txt>
]]>

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