Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
02:32:20 (1449348): wrapper (7.7.26015): starting
02:32:20 (1449348): wrapper: running run_atlas (--nthreads 12)
[2025-06-07 02:32:20] Arguments: --nthreads 12
[2025-06-07 02:32:20] Threads: 12
[2025-06-07 02:32:20] Checking for CVMFS
[2025-06-07 02:32:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-07 02:32:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-07 02:32:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-07 02:32:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-07 02:32:23] 2.12.7.0 19605 5395 56412 146883 3 56 2436122 4096001 912 130560 0 3721970 99.989 1268563 155 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-07 02:32:23] CVMFS is ok
[2025-06-07 02:32:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-07 02:32:23] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-07 02:32:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-07 02:32:23] Further information can be found at the LHC@home message board.
[2025-06-07 02:32:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-07 02:32:23] Checking for apptainer binary...
[2025-06-07 02:32:23] apptainer is not installed, using version from CVMFS
[2025-06-07 02:32:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-07 02:32:24] g630
[2025-06-07 02:32:24] apptainer works
[2025-06-07 02:32:24] Set ATHENA_PROC_NUMBER=12
[2025-06-07 02:32:24] Set ATHENA_CORE_NUMBER=12
[2025-06-07 02:32:24] Starting ATLAS job with PandaID=6678390299
[2025-06-07 02:32:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-07 08:09:49]  *** The last 200 lines of the pilot log: ***
[2025-06-07 08:09:49] 2025-06-07 08:09:26,414 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-07 08:09:49] 2025-06-07 08:09:28,926 | INFO     | monitor loop #1471: job 0:6678390299 is in state 'finished'
[2025-06-07 08:09:49] 2025-06-07 08:09:28,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-07 08:09:49] 2025-06-07 08:09:31,438 | INFO     | monitor loop #1472: job 0:6678390299 is in state 'finished'
[2025-06-07 08:09:49] 2025-06-07 08:09:31,438 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-07 08:09:49] 2025-06-07 08:09:33,558 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-07 08:09:49] 2025-06-07 08:09:33,558 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6678390299/memory_monitor_summary.json (trf name=prmon)
[2025-06-07 08:09:49] 2025-06-07 08:09:33,559 | INFO     | extracted standard info from prmon json
[2025-06-07 08:09:49] 2025-06-07 08:09:33,559 | INFO     | extracted standard memory fields from prmon json
[2025-06-07 08:09:49] 2025-06-07 08:09:33,559 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-07 08:09:49] 2025-06-07 08:09:33,559 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-07 08:09:49] 2025-06-07 08:09:33,559 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-07 08:09:49] 2025-06-07 08:09:33,583 | INFO     | fitting pss+swap vs Time
[2025-06-07 08:09:49] 2025-06-07 08:09:33,583 | INFO     | sum of square deviations: 10941837050.31405
[2025-06-07 08:09:49] 2025-06-07 08:09:33,585 | INFO     | sum of deviations: 30044160523.11278
[2025-06-07 08:09:49] 2025-06-07 08:09:33,585 | INFO     | mean x: 1749273694.7042682
[2025-06-07 08:09:49] 2025-06-07 08:09:33,585 | INFO     | mean y: 2647264.9908536584
[2025-06-07 08:09:49] 2025-06-07 08:09:33,585 | INFO     | -- intersect: -4800518733.633224
[2025-06-07 08:09:49] 2025-06-07 08:09:33,585 | INFO     | intersect: -4800518733.633224
[2025-06-07 08:09:49] 2025-06-07 08:09:33,586 | INFO     | chi2: 4.083170357088118
[2025-06-07 08:09:49] 2025-06-07 08:09:33,606 | INFO     | sum of square deviations: 10449048245.102074
[2025-06-07 08:09:49] 2025-06-07 08:09:33,608 | INFO     | sum of deviations: 53214723805.975235
[2025-06-07 08:09:49] 2025-06-07 08:09:33,608 | INFO     | mean x: 1749273542.2074304
[2025-06-07 08:09:49] 2025-06-07 08:09:33,608 | INFO     | mean y: 2654345.343653251
[2025-06-07 08:09:49] 2025-06-07 08:09:33,608 | INFO     | -- intersect: -8906014293.764446
[2025-06-07 08:09:49] 2025-06-07 08:09:33,608 | INFO     | intersect: -8906014293.764446
[2025-06-07 08:09:49] 2025-06-07 08:09:33,608 | INFO     | chi2: 3.3016680076601377
[2025-06-07 08:09:49] 2025-06-07 08:09:33,608 | INFO     | current chi2=3.3016680076601377 (change=19.13959695733349 %)
[2025-06-07 08:09:49] 2025-06-07 08:09:33,609 | INFO     | right removable region: 322
[2025-06-07 08:09:49] 2025-06-07 08:09:33,609 | INFO     | sum of square deviations: 10449007375.102072
[2025-06-07 08:09:49] 2025-06-07 08:09:33,630 | INFO     | sum of deviations: -60704176584.79874
[2025-06-07 08:09:49] 2025-06-07 08:09:33,631 | INFO     | mean x: 1749273847.2074304
[2025-06-07 08:09:49] 2025-06-07 08:09:33,631 | INFO     | mean y: 2675275.8328173375
[2025-06-07 08:09:49] 2025-06-07 08:09:33,631 | INFO     | -- intersect: 10165193561.452536
[2025-06-07 08:09:49] 2025-06-07 08:09:33,631 | INFO     | intersect: 10165193561.452536
[2025-06-07 08:09:49] 2025-06-07 08:09:33,631 | INFO     | chi2: 1.3945143055401819
[2025-06-07 08:09:49] 2025-06-07 08:09:33,631 | INFO     | current chi2=1.3945143055401819 (change=65.84726612938411 %)
[2025-06-07 08:09:49] 2025-06-07 08:09:33,631 | INFO     | sum of square deviations: 9971201237.38366
[2025-06-07 08:09:49] 2025-06-07 08:09:33,633 | INFO     | sum of deviations: -82497004740.15094
[2025-06-07 08:09:49] 2025-06-07 08:09:33,633 | INFO     | mean x: 1749273999.710692
[2025-06-07 08:09:49] 2025-06-07 08:09:33,633 | INFO     | mean y: 2682218.867924528
[2025-06-07 08:09:49] 2025-06-07 08:09:33,633 | INFO     | -- intersect: 14475348250.81145
[2025-06-07 08:09:49] 2025-06-07 08:09:33,633 | INFO     | intersect: 14475348250.81145
[2025-06-07 08:09:49] 2025-06-07 08:09:33,634 | INFO     | chi2: 1.213730269213789
[2025-06-07 08:09:49] 2025-06-07 08:09:33,634 | INFO     | current chi2=1.213730269213789 (change=12.963942758289882 %)
[2025-06-07 08:09:49] 2025-06-07 08:09:33,634 | INFO     | left removable region: 20
[2025-06-07 08:09:49] 2025-06-07 08:09:33,642 | INFO     | sum of square deviations: 8540519924.63572
[2025-06-07 08:09:49] 2025-06-07 08:09:33,644 | INFO     | sum of deviations: -60537633454.67547
[2025-06-07 08:09:49] 2025-06-07 08:09:33,644 | INFO     | mean x: 1749274121.7218542
[2025-06-07 08:09:49] 2025-06-07 08:09:33,644 | INFO     | mean y: 2690888.4205298014
[2025-06-07 08:09:49] 2025-06-07 08:09:33,644 | INFO     | -- intersect: 12402043214.393097
[2025-06-07 08:09:49] 2025-06-07 08:09:33,644 | INFO     | intersect: 12402043214.393097
[2025-06-07 08:09:49] 2025-06-07 08:09:33,644 | INFO     | chi2: 0.3423456251384868
[2025-06-07 08:09:49] 2025-06-07 08:09:33,644 | INFO     | -- intersect: 12402043214.393097
[2025-06-07 08:09:49] 2025-06-07 08:09:33,644 | INFO     | current memory leak: -7.09 B/s (using 302 data points, chi2=0.34)
[2025-06-07 08:09:49] 2025-06-07 08:09:33,645 | INFO     | ..............................
[2025-06-07 08:09:49] 2025-06-07 08:09:33,645 | INFO     | . Timing measurements:
[2025-06-07 08:09:49] 2025-06-07 08:09:33,645 | INFO     | . get job = 0 s
[2025-06-07 08:09:49] 2025-06-07 08:09:33,645 | INFO     | . initial setup = 8 s
[2025-06-07 08:09:49] 2025-06-07 08:09:33,645 | INFO     | . payload setup = 57 s
[2025-06-07 08:09:49] 2025-06-07 08:09:33,645 | INFO     | . stage-in = 0 s
[2025-06-07 08:09:49] 2025-06-07 08:09:33,645 | INFO     | . payload execution = 20021 s
[2025-06-07 08:09:49] 2025-06-07 08:09:33,645 | INFO     | . stage-out = 3 s
[2025-06-07 08:09:49] 2025-06-07 08:09:33,645 | INFO     | . log creation = 0 s
[2025-06-07 08:09:49] 2025-06-07 08:09:33,645 | INFO     | ..............................
[2025-06-07 08:09:49] 2025-06-07 08:09:33,982 | INFO     | 
[2025-06-07 08:09:49] 2025-06-07 08:09:33,982 | INFO     | job summary report
[2025-06-07 08:09:49] 2025-06-07 08:09:33,982 | INFO     | --------------------------------------------------
[2025-06-07 08:09:49] 2025-06-07 08:09:33,982 | INFO     | PanDA job id: 6678390299
[2025-06-07 08:09:49] 2025-06-07 08:09:33,982 | INFO     | task id: 45006595
[2025-06-07 08:09:49] 2025-06-07 08:09:33,982 | INFO     | errors: (none)
[2025-06-07 08:09:49] 2025-06-07 08:09:33,983 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-07 08:09:49] 2025-06-07 08:09:33,983 | INFO     | pilot state: finished 
[2025-06-07 08:09:49] 2025-06-07 08:09:33,983 | INFO     | transexitcode: 0
[2025-06-07 08:09:49] 2025-06-07 08:09:33,983 | INFO     | exeerrorcode: 0
[2025-06-07 08:09:49] 2025-06-07 08:09:33,983 | INFO     | exeerrordiag: 
[2025-06-07 08:09:49] 2025-06-07 08:09:33,983 | INFO     | exitcode: 0
[2025-06-07 08:09:49] 2025-06-07 08:09:33,983 | INFO     | exitmsg: OK
[2025-06-07 08:09:49] 2025-06-07 08:09:33,983 | INFO     | cpuconsumptiontime: 30889 s
[2025-06-07 08:09:49] 2025-06-07 08:09:33,983 | INFO     | nevents: 400
[2025-06-07 08:09:49] 2025-06-07 08:09:33,983 | INFO     | neventsw: 0
[2025-06-07 08:09:49] 2025-06-07 08:09:33,983 | INFO     | pid: 1459350
[2025-06-07 08:09:49] 2025-06-07 08:09:33,983 | INFO     | pgrp: 1459350
[2025-06-07 08:09:49] 2025-06-07 08:09:33,983 | INFO     | corecount: 12
[2025-06-07 08:09:49] 2025-06-07 08:09:33,983 | INFO     | event service: False
[2025-06-07 08:09:49] 2025-06-07 08:09:33,983 | INFO     | sizes: {0: 2397141, 1: 2397169, 2: 2397340, 13: 2397368, 23: 2397658, 20082: 2430477, 20086: 2439464, 20089: 2439520, 20131: 2439690}
[2025-06-07 08:09:49] 2025-06-07 08:09:33,983 | INFO     | --------------------------------------------------
[2025-06-07 08:09:49] 2025-06-07 08:09:33,984 | INFO     | 
[2025-06-07 08:09:49] 2025-06-07 08:09:33,984 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-06-07 08:09:49] 2025-06-07 08:09:34,042 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-07 08:09:49] 2025-06-07 08:09:34,042 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-07 08:09:49] 2025-06-07 08:09:34,042 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-07 08:09:49] 2025-06-07 08:09:34,043 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-07 08:09:49] 2025-06-07 08:09:34,043 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-07 08:09:49] 2025-06-07 08:09:34,043 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-07 08:09:49] 2025-06-07 08:09:34,043 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-07 08:09:49] 2025-06-07 08:09:34,043 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-07 08:09:49] 2025-06-07 08:09:34,043 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-07 08:09:49] 2025-06-07 08:09:34,043 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-07 08:09:49] 2025-06-07 08:09:34,043 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-07 08:09:49] 2025-06-07 08:09:34,043 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-07 08:09:49] 2025-06-07 08:09:34,043 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-07 08:09:49] 2025-06-07 08:09:34,043 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-07 08:09:49] 2025-06-07 08:09:34,043 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-07 08:09:49] 2025-06-07 08:09:34,043 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-07 08:09:49] 2025-06-07 08:09:34,043 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-07 08:09:49] 2025-06-07 08:09:34,044 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-07 08:09:49] 2025-06-07 08:09:34,044 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-07 08:09:49] 2025-06-07 08:09:34,044 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-07 08:09:49] 2025-06-07 08:09:34,044 | INFO     | job 6678390299 has completed (purged errors)
[2025-06-07 08:09:49] 2025-06-07 08:09:34,044 | INFO     | overall cleanup function is called
[2025-06-07 08:09:49] 2025-06-07 08:09:35,050 | INFO     | --- collectZombieJob: --- 10, [1459350]
[2025-06-07 08:09:49] 2025-06-07 08:09:35,050 | INFO     | zombie collector waiting for pid 1459350
[2025-06-07 08:09:49] 2025-06-07 08:09:35,050 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-07 08:09:49] 2025-06-07 08:09:35,050 | INFO     | collected zombie processes
[2025-06-07 08:09:49] 2025-06-07 08:09:35,050 | INFO     | will attempt to kill all subprocesses of pid=1459350
[2025-06-07 08:09:49] 2025-06-07 08:09:35,269 | INFO     | process IDs to be killed: [1459350] (in reverse order)
[2025-06-07 08:09:49] 2025-06-07 08:09:35,382 | WARNING  | found no corresponding commands to process id(s)
[2025-06-07 08:09:49] 2025-06-07 08:09:35,383 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-07 08:09:49] 2025-06-07 08:09:35,384 | INFO     | did not find any defunct processes belonging to 1459350
[2025-06-07 08:09:49] 2025-06-07 08:09:35,385 | INFO     | did not find any defunct processes belonging to 1459350
[2025-06-07 08:09:49] 2025-06-07 08:09:35,385 | INFO     | ready for new job
[2025-06-07 08:09:49] 2025-06-07 08:09:35,385 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-07 08:09:49] 2025-06-07 08:09:35,403 | INFO     | **************************************
[2025-06-07 08:09:49] 2025-06-07 08:09:35,403 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-07 08:09:49] 2025-06-07 08:09:35,403 | INFO     | **************************************
[2025-06-07 08:09:49] 2025-06-07 08:09:35,403 | INFO     | 
[2025-06-07 08:09:49] 2025-06-07 08:09:35,422 | INFO     | architecture information:
[2025-06-07 08:09:49] 2025-06-07 08:09:35,426 | INFO     | executing command: cat /etc/os-release
[2025-06-07 08:09:49] 2025-06-07 08:09:35,466 | INFO     | cat /etc/os-release:
[2025-06-07 08:09:49] NAME="CentOS Linux"
[2025-06-07 08:09:49] VERSION="7 (Core)"
[2025-06-07 08:09:49] ID="centos"
[2025-06-07 08:09:49] ID_LIKE="rhel fedora"
[2025-06-07 08:09:49] VERSION_ID="7"
[2025-06-07 08:09:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-07 08:09:49] ANSI_COLOR="0;31"
[2025-06-07 08:09:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-07 08:09:49] HOME_URL="https://www.centos.org/"
[2025-06-07 08:09:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-07 08:09:49] 
[2025-06-07 08:09:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-07 08:09:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-07 08:09:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-07 08:09:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-07 08:09:49] 
[2025-06-07 08:09:49] 2025-06-07 08:09:35,466 | INFO     | **************************************
[2025-06-07 08:09:49] 2025-06-07 08:09:35,970 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-06-07 08:09:49] 2025-06-07 08:09:36,018 | INFO     | sufficient remaining disk space (184159305728 B)
[2025-06-07 08:09:49] 2025-06-07 08:09:36,018 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-07 08:09:49] 2025-06-07 08:09:36,019 | INFO     | current server update state: UPDATING_FINAL
[2025-06-07 08:09:49] 2025-06-07 08:09:36,019 | INFO     | update_server=False
[2025-06-07 08:09:49] 2025-06-07 08:09:36,019 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-07 08:09:49] 2025-06-07 08:09:36,022 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-07 08:09:49] 2025-06-07 08:09:36,022 | INFO     | found 0 job(s) in 20 queues
[2025-06-07 08:09:49] 2025-06-07 08:09:36,022 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-07 08:09:49] 2025-06-07 08:09:36,022 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-07 08:09:49] 2025-06-07 08:09:36,462 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-07 08:09:49] 2025-06-07 08:09:36,464 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-07 08:09:49] 2025-06-07 08:09:36,464 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-07 08:09:49] 2025-06-07 08:09:36,464 | INFO     | will abort loop
[2025-06-07 08:09:49] 2025-06-07 08:09:36,762 | INFO     | all job control threads have been joined
[2025-06-07 08:09:49] 2025-06-07 08:09:36,770 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-07 08:09:49] 2025-06-07 08:09:36,802 | INFO     | all payload control threads have been joined
[2025-06-07 08:09:49] 2025-06-07 08:09:36,846 | INFO     | all data control threads have been joined
[2025-06-07 08:09:49] 2025-06-07 08:09:37,022 | INFO     | [job] retrieve thread has finished
[2025-06-07 08:09:49] 2025-06-07 08:09:37,466 | INFO     | [job] job monitor thread has finished
[2025-06-07 08:09:49] 2025-06-07 08:09:37,502 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-07 08:09:49] 2025-06-07 08:09:37,542 | INFO     | [job] validate thread has finished
[2025-06-07 08:09:49] 2025-06-07 08:09:37,542 | INFO     | [payload] validate_pre thread has finished
[2025-06-07 08:09:49] 2025-06-07 08:09:37,574 | INFO     | [payload] validate_post thread has finished
[2025-06-07 08:09:49] 2025-06-07 08:09:37,578 | INFO     | [payload] failed_post thread has finished
[2025-06-07 08:09:49] 2025-06-07 08:09:37,766 | INFO     | [job] control thread has finished
[2025-06-07 08:09:49] 2025-06-07 08:09:37,806 | INFO     | [payload] control thread has finished
[2025-06-07 08:09:49] 2025-06-07 08:09:37,850 | INFO     | [data] control thread has finished
[2025-06-07 08:09:49] 2025-06-07 08:09:38,022 | INFO     | [job] create_data_payload thread has finished
[2025-06-07 08:09:49] 2025-06-07 08:09:38,226 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-07 08:09:49] 2025-06-07 08:09:38,258 | INFO     | [data] copytool_in thread has finished
[2025-06-07 08:09:49] 2025-06-07 08:09:38,502 | INFO     | [payload] execute_payloads thread has finished
[2025-06-07 08:09:49] 2025-06-07 08:09:38,778 | INFO     | [data] copytool_out thread has finished
[2025-06-07 08:09:49] 2025-06-07 08:09:38,934 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-07 08:09:49] 2025-06-07 08:09:39,938 | INFO     | [job] queue monitor thread has finished
[2025-06-07 08:09:49] 2025-06-07 08:09:42,242 | INFO     | [data] queue_monitor thread has finished
[2025-06-07 08:09:49] 2025-06-07 08:09:43,274 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140188415731520)>', '<ExcThread(monitor, started 140187531212544)>']
[2025-06-07 08:09:49] 2025-06-07 08:09:44,054 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-07 08:09:49] 2025-06-07 08:09:44,054 | INFO     | [monitor] control thread has ended
[2025-06-07 08:09:49] 2025-06-07 08:09:48,298 | INFO     | all workflow threads have been joined
[2025-06-07 08:09:49] 2025-06-07 08:09:48,298 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-07 08:09:49] 2025-06-07 08:09:48,298 | INFO     | traces error code: 0
[2025-06-07 08:09:49] 2025-06-07 08:09:48,298 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-07 08:09:49] 2025-06-07 08:09:48,631 [wrapper] ==== pilot stdout END ====
[2025-06-07 08:09:49] 2025-06-07 08:09:48,662 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-07 08:09:49] 2025-06-07 08:09:48,698 [wrapper] pilotpid: 1452929
[2025-06-07 08:09:49] 2025-06-07 08:09:48,723 [wrapper] Pilot exit status: 0
[2025-06-07 08:09:49] 2025-06-07 08:09:48,839 [wrapper] pandaids: 6678390299
[2025-06-07 08:09:49] 2025-06-07 08:09:48,935 [wrapper] cleanup supervisor_pilot 1530319 1452930
[2025-06-07 08:09:49] 2025-06-07 08:09:48,958 [wrapper] Test setup, not cleaning
[2025-06-07 08:09:49] 2025-06-07 08:09:48,982 [wrapper] apfmon messages muted
[2025-06-07 08:09:49] 2025-06-07 08:09:49,006 [wrapper] ==== wrapper stdout END ====
[2025-06-07 08:09:49] 2025-06-07 08:09:49,038 [wrapper] ==== wrapper stderr END ====
[2025-06-07 08:09:49]  *** Error codes and diagnostics ***
[2025-06-07 08:09:49]     "exeErrorCode": 0,
[2025-06-07 08:09:49]     "exeErrorDiag": "",
[2025-06-07 08:09:49]     "pilotErrorCode": 0,
[2025-06-07 08:09:49]     "pilotErrorDiag": "",
[2025-06-07 08:09:49]  *** Listing of results directory ***
[2025-06-07 08:09:49] total 387944
[2025-06-07 08:09:49] -rw-r--r-- 1 boinc boinc    495897 Jun  4 07:04 pilot3.tar.gz
[2025-06-07 08:09:49] -rw-r--r-- 1 boinc boinc      5111 Jun  4 07:24 queuedata.json
[2025-06-07 08:09:49] -rwx------ 1 boinc boinc     37140 Jun  4 07:26 runpilot2-wrapper.sh
[2025-06-07 08:09:49] -rw-rw-r-- 1 boinc boinc       100 Jun  7 02:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-07 08:09:49] -rwxr-xr-x 1 boinc boinc      7986 Jun  7 02:32 run_atlas
[2025-06-07 08:09:49] -rw-rw-r-- 1 boinc boinc       105 Jun  7 02:32 job.xml
[2025-06-07 08:09:49] -rw-r--r-- 2 boinc boinc     15093 Jun  7 02:32 start_atlas.sh
[2025-06-07 08:09:49] drwxrwx--x 2 boinc boinc      4096 Jun  7 02:32 shared
[2025-06-07 08:09:49] -rw-r--r-- 2 boinc boinc    508875 Jun  7 02:32 input.tar.gz
[2025-06-07 08:09:49] -rw-rw-r-- 1 boinc boinc      9280 Jun  7 02:32 init_data.xml
[2025-06-07 08:09:49] -rw-r--r-- 2 boinc boinc 214425159 Jun  7 02:32 EVNT.45006593._002191.pool.root.1
[2025-06-07 08:09:49] -rw-rw-r-- 1 boinc boinc         0 Jun  7 02:32 boinc_lockfile
[2025-06-07 08:09:49] -rw-rw-r-- 1 boinc boinc      2523 Jun  7 02:32 pandaJob.out
[2025-06-07 08:09:49] -rw------- 1 boinc boinc    985748 Jun  7 02:33 agis_schedconf.cvmfs.json
[2025-06-07 08:09:49] drwx------ 4 boinc boinc      4096 Jun  7 02:33 pilot3
[2025-06-07 08:09:49] -rw------- 1 boinc boinc 174293264 Jun  7 08:07 HITS.45006595._054750.pool.root.1
[2025-06-07 08:09:49] -rw-rw-r-- 1 boinc boinc       530 Jun  7 08:07 boinc_task_state.xml
[2025-06-07 08:09:49] -rw------- 1 boinc boinc      1020 Jun  7 08:08 memory_monitor_summary.json
[2025-06-07 08:09:49] -rw------- 1 boinc boinc   1598969 Jun  7 08:08 agis_ddmendpoints.agis.ALL.json
[2025-06-07 08:09:49] -rw------- 1 boinc boinc    488363 Jun  7 08:08 log.45006595._054750.job.log.tgz.1
[2025-06-07 08:09:49] -rw------- 1 boinc boinc        95 Jun  7 08:09 pilot_heartbeat.json
[2025-06-07 08:09:49] -rw------- 1 boinc boinc      7653 Jun  7 08:09 heartbeat.json
[2025-06-07 08:09:49] -rw-rw-r-- 1 boinc boinc      8192 Jun  7 08:09 boinc_mmap_file
[2025-06-07 08:09:49] -rw-rw-r-- 1 boinc boinc        28 Jun  7 08:09 wrapper_checkpoint.txt
[2025-06-07 08:09:49] -rw------- 1 boinc boinc      4686 Jun  7 08:09 pilotlog.txt
[2025-06-07 08:09:49] -rw------- 1 boinc boinc   1862566 Jun  7 08:09 log.45006595._054750.job.log.1
[2025-06-07 08:09:49] -rw------- 1 boinc boinc       357 Jun  7 08:09 output.list
[2025-06-07 08:09:49] -rw-rw-r-- 1 boinc boinc       620 Jun  7 08:09 runtime_log
[2025-06-07 08:09:49] -rw------- 1 boinc boinc   2365440 Jun  7 08:09 result.tar.gz
[2025-06-07 08:09:49] -rw-rw-r-- 1 boinc boinc      8944 Jun  7 08:09 runtime_log.err
[2025-06-07 08:09:49] -rw------- 1 boinc boinc       651 Jun  7 08:09 O81MDmLhxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFcnKDmWAeIBo.diag
[2025-06-07 08:09:49] -rw-rw-r-- 1 boinc boinc     21340 Jun  7 08:09 stderr.txt
[2025-06-07 08:09:49] HITS file was successfully produced:
[2025-06-07 08:09:49] -rw------- 1 boinc boinc 174293264 Jun  7 08:07 shared/HITS.pool.root.1
[2025-06-07 08:09:49]  *** Contents of shared directory: ***
[2025-06-07 08:09:49] total 382448
[2025-06-07 08:09:49] -rw-r--r-- 2 boinc boinc     15093 Jun  7 02:32 start_atlas.sh
[2025-06-07 08:09:49] -rw-r--r-- 2 boinc boinc    508875 Jun  7 02:32 input.tar.gz
[2025-06-07 08:09:49] -rw-r--r-- 2 boinc boinc 214425159 Jun  7 02:32 ATLAS.root_0
[2025-06-07 08:09:49] -rw------- 1 boinc boinc 174293264 Jun  7 08:07 HITS.pool.root.1
[2025-06-07 08:09:49] -rw------- 1 boinc boinc   2365440 Jun  7 08:09 result.tar.gz
08:09:51 (1449348): run_atlas exited; CPU time 30980.558492
08:09:51 (1449348): called boinc_finish(0)

</stderr_txt>
]]>

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