Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:17:05 (3945064): wrapper (7.7.26015): starting
08:17:05 (3945064): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:17:05] Arguments: --nthreads 8
[2025-06-04 08:17:05] Threads: 8
[2025-06-04 08:17:05] Checking for CVMFS
[2025-06-04 08:17:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:17:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:17:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:17:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:17:05] 2.12.6.0 599889 23261 495976 146780 2 65 18996054 32935937 12339 16776704 0 132025397 99.659 112271108 26908 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:17:05] CVMFS is ok
[2025-06-04 08:17:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:17:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:17:05] Further information can be found at the LHC@home message board.
[2025-06-04 08:17:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:17:05] Checking for apptainer binary...
[2025-06-04 08:17:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:17:05] Running /usr/bin/apptainer --version
[2025-06-04 08:17:05] apptainer version 1.4.1-1.el9
[2025-06-04 08:17:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:17:05] c6-12-27-1.aglt2.org
[2025-06-04 08:17:05] apptainer works
[2025-06-04 08:17:05] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:17:05] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:17:05] Starting ATLAS job with PandaID=6666746568
[2025-06-04 08:17:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:32:52]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:32:52]  is_tar=False
[2025-06-04 09:32:52]  lfn=log.44871837._061601.job.log.tgz.1
[2025-06-04 09:32:52]  mtime=0
[2025-06-04 09:32:52]  protocol_id=None
[2025-06-04 09:32:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:32:52]  replicas=None
[2025-06-04 09:32:52]  scope=mc23_13p6TeV
[2025-06-04 09:32:52]  status=None
[2025-06-04 09:32:52]  status_code=0
[2025-06-04 09:32:52]  storage_token=
[2025-06-04 09:32:52]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6666746568/log.44871837._061601.job.log.tgz.1
[2025-06-04 09:32:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/fa/log.44871837._061601.job.log.tgz.1
[2025-06-04 09:32:52]  workdir=None
[2025-06-04 09:32:52] ]
[2025-06-04 09:32:52] 2025-06-04 13:32:24,557 | INFO     | transferring file log.44871837._061601.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6666746568/log.44871837._061601.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:32:52] 2025-06-04 13:32:24,557 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6666746568/log.44871837._061601.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._061601.job
[2025-06-04 09:32:52] 2025-06-04 13:32:24,568 | INFO     | adding to output.list: log.44871837._061601.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/fa/log.44871837._061601.job.log.tg
[2025-06-04 09:32:52] 2025-06-04 13:32:24,569 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:32:52] 2025-06-04 13:32:24,569 | INFO     | summary of transferred files:
[2025-06-04 09:32:52] 2025-06-04 13:32:24,569 | INFO     |  -- lfn=log.44871837._061601.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:32:52] 2025-06-04 13:32:24,569 | INFO     | stage-out finished correctly
[2025-06-04 09:32:52] 2025-06-04 13:32:26,044 | INFO     | monitor loop #336: job 0:6666746568 is in state 'finished'
[2025-06-04 09:32:52] 2025-06-04 13:32:26,044 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:32:52] 2025-06-04 13:32:26,392 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:32:52] 2025-06-04 13:32:28,546 | INFO     | job 6666746568 has state=finished
[2025-06-04 09:32:52] 2025-06-04 13:32:28,547 | INFO     | preparing for final server update for job 6666746568 in state='finished'
[2025-06-04 09:32:52] 2025-06-04 13:32:28,547 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:32:52] 2025-06-04 13:32:28,547 | INFO     | monitor loop #337: job 0:6666746568 is in state 'finished'
[2025-06-04 09:32:52] 2025-06-04 13:32:28,548 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:32:52] 2025-06-04 13:32:28,548 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:32:52] 2025-06-04 13:32:28,548 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:32:52] 2025-06-04 13:32:28,548 | INFO     | job 6666746568 has finished - writing final server update
[2025-06-04 09:32:52] 2025-06-04 13:32:28,548 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:32:52] 2025-06-04 13:32:28,566 | INFO     | executing command: lscpu
[2025-06-04 09:32:52] 2025-06-04 13:32:28,634 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:32:52] 2025-06-04 13:32:28,721 | INFO     | PID=3948681 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 09:32:52] 2025-06-04 13:32:28,722 | INFO     | .. there are 22 such processes running
[2025-06-04 09:32:52] 2025-06-04 13:32:31,050 | INFO     | monitor loop #338: job 0:6666746568 is in state 'finished'
[2025-06-04 09:32:52] 2025-06-04 13:32:31,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:32:52] 2025-06-04 13:32:31,081 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:32:52] 2025-06-04 13:32:31,081 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6666746568/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:32:52] 2025-06-04 13:32:31,082 | INFO     | extracted standard info from prmon json
[2025-06-04 09:32:52] 2025-06-04 13:32:31,082 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:32:52] 2025-06-04 13:32:31,082 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:32:52] 2025-06-04 13:32:31,082 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:32:52] 2025-06-04 13:32:31,082 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:32:52] 2025-06-04 13:32:31,083 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:32:52] 2025-06-04 13:32:31,083 | INFO     | sum of square deviations: 93240818.0
[2025-06-04 09:32:52] 2025-06-04 13:32:31,083 | INFO     | sum of deviations: -1015663908.0
[2025-06-04 09:32:52] 2025-06-04 13:32:31,083 | INFO     | mean x: 1749041771.0
[2025-06-04 09:32:52] 2025-06-04 13:32:31,083 | INFO     | mean y: 2395349.104477612
[2025-06-04 09:32:52] 2025-06-04 13:32:31,083 | INFO     | -- intersect: 19054551244.917202
[2025-06-04 09:32:52] 2025-06-04 13:32:31,084 | INFO     | intersect: 19054551244.917202
[2025-06-04 09:32:52] 2025-06-04 13:32:31,084 | INFO     | chi2: 0.7949689526802235
[2025-06-04 09:32:52] 2025-06-04 13:32:31,084 | INFO     | -- intersect: 19054551244.917202
[2025-06-04 09:32:52] 2025-06-04 13:32:31,084 | INFO     | current memory leak: -10.89 B/s (using 67 data points, chi2=0.79)
[2025-06-04 09:32:52] 2025-06-04 13:32:31,084 | INFO     | ..............................
[2025-06-04 09:32:52] 2025-06-04 13:32:31,084 | INFO     | . Timing measurements:
[2025-06-04 09:32:52] 2025-06-04 13:32:31,084 | INFO     | . get job = 0 s
[2025-06-04 09:32:52] 2025-06-04 13:32:31,084 | INFO     | . initial setup = 2 s
[2025-06-04 09:32:52] 2025-06-04 13:32:31,084 | INFO     | . payload setup = 3 s
[2025-06-04 09:32:52] 2025-06-04 13:32:31,084 | INFO     | . stage-in = 0 s
[2025-06-04 09:32:52] 2025-06-04 13:32:31,084 | INFO     | . payload execution = 4490 s
[2025-06-04 09:32:52] 2025-06-04 13:32:31,084 | INFO     | . stage-out = 0 s
[2025-06-04 09:32:52] 2025-06-04 13:32:31,084 | INFO     | . log creation = 0 s
[2025-06-04 09:32:52] 2025-06-04 13:32:31,084 | INFO     | ..............................
[2025-06-04 09:32:52] 2025-06-04 13:32:31,132 | INFO     | 
[2025-06-04 09:32:52] 2025-06-04 13:32:31,132 | INFO     | job summary report
[2025-06-04 09:32:52] 2025-06-04 13:32:31,132 | INFO     | --------------------------------------------------
[2025-06-04 09:32:52] 2025-06-04 13:32:31,132 | INFO     | PanDA job id: 6666746568
[2025-06-04 09:32:52] 2025-06-04 13:32:31,132 | INFO     | task id: 44871837
[2025-06-04 09:32:52] 2025-06-04 13:32:31,132 | INFO     | errors: (none)
[2025-06-04 09:32:52] 2025-06-04 13:32:31,132 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:32:52] 2025-06-04 13:32:31,132 | INFO     | pilot state: finished 
[2025-06-04 09:32:52] 2025-06-04 13:32:31,132 | INFO     | transexitcode: 0
[2025-06-04 09:32:52] 2025-06-04 13:32:31,132 | INFO     | exeerrorcode: 0
[2025-06-04 09:32:52] 2025-06-04 13:32:31,132 | INFO     | exeerrordiag: 
[2025-06-04 09:32:52] 2025-06-04 13:32:31,133 | INFO     | exitcode: 0
[2025-06-04 09:32:52] 2025-06-04 13:32:31,133 | INFO     | exitmsg: OK
[2025-06-04 09:32:52] 2025-06-04 13:32:31,133 | INFO     | cpuconsumptiontime: 30158 s
[2025-06-04 09:32:52] 2025-06-04 13:32:31,133 | INFO     | nevents: 400
[2025-06-04 09:32:52] 2025-06-04 13:32:31,133 | INFO     | neventsw: 0
[2025-06-04 09:32:52] 2025-06-04 13:32:31,133 | INFO     | pid: 3955195
[2025-06-04 09:32:52] 2025-06-04 13:32:31,133 | INFO     | pgrp: 3955195
[2025-06-04 09:32:52] 2025-06-04 13:32:31,133 | INFO     | corecount: 8
[2025-06-04 09:32:52] 2025-06-04 13:32:31,133 | INFO     | event service: False
[2025-06-04 09:32:52] 2025-06-04 13:32:31,133 | INFO     | sizes: {0: 2397392, 3: 2397598, 11: 2397626, 4498: 2423695, 4499: 2432636, 4501: 2432692, 4505: 2432990}
[2025-06-04 09:32:52] 2025-06-04 13:32:31,133 | INFO     | --------------------------------------------------
[2025-06-04 09:32:52] 2025-06-04 13:32:31,133 | INFO     | 
[2025-06-04 09:32:52] 2025-06-04 13:32:31,133 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 09:32:52] 2025-06-04 13:32:31,145 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:32:52] 2025-06-04 13:32:31,146 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:32:52] 2025-06-04 13:32:31,146 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:32:52] 2025-06-04 13:32:31,146 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:32:52] 2025-06-04 13:32:31,146 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:32:52] 2025-06-04 13:32:31,146 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:32:52] 2025-06-04 13:32:31,146 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:32:52] 2025-06-04 13:32:31,146 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:32:52] 2025-06-04 13:32:31,146 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:32:52] 2025-06-04 13:32:31,146 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:32:52] 2025-06-04 13:32:31,146 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:32:52] 2025-06-04 13:32:31,146 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:32:52] 2025-06-04 13:32:31,146 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:32:52] 2025-06-04 13:32:31,146 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:32:52] 2025-06-04 13:32:31,146 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:32:52] 2025-06-04 13:32:31,146 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:32:52] 2025-06-04 13:32:31,146 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:32:52] 2025-06-04 13:32:31,146 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:32:52] 2025-06-04 13:32:31,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:32:52] 2025-06-04 13:32:31,146 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:32:52] 2025-06-04 13:32:31,147 | INFO     | job 6666746568 has completed (purged errors)
[2025-06-04 09:32:52] 2025-06-04 13:32:31,147 | INFO     | overall cleanup function is called
[2025-06-04 09:32:52] 2025-06-04 13:32:32,153 | INFO     | --- collectZombieJob: --- 10, [3955195]
[2025-06-04 09:32:52] 2025-06-04 13:32:32,153 | INFO     | zombie collector waiting for pid 3955195
[2025-06-04 09:32:52] 2025-06-04 13:32:32,154 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:32:52] 2025-06-04 13:32:32,154 | INFO     | collected zombie processes
[2025-06-04 09:32:52] 2025-06-04 13:32:32,154 | INFO     | will attempt to kill all subprocesses of pid=3955195
[2025-06-04 09:32:52] 2025-06-04 13:32:32,385 | INFO     | process IDs to be killed: [3955195] (in reverse order)
[2025-06-04 09:32:52] 2025-06-04 13:32:32,450 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:32:52] 2025-06-04 13:32:32,451 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:32:52] 2025-06-04 13:32:32,460 | INFO     | did not find any defunct processes belonging to 3955195
[2025-06-04 09:32:52] 2025-06-04 13:32:32,469 | INFO     | did not find any defunct processes belonging to 3955195
[2025-06-04 09:32:52] 2025-06-04 13:32:32,469 | INFO     | ready for new job
[2025-06-04 09:32:52] 2025-06-04 13:32:32,469 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:32:52] 2025-06-04 13:32:32,470 | INFO     | **************************************
[2025-06-04 09:32:52] 2025-06-04 13:32:32,470 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:32:52] 2025-06-04 13:32:32,470 | INFO     | **************************************
[2025-06-04 09:32:52] 2025-06-04 13:32:32,470 | INFO     | 
[2025-06-04 09:32:52] 2025-06-04 13:32:32,485 | INFO     | architecture information:
[2025-06-04 09:32:52] 2025-06-04 13:32:32,485 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:32:52] 2025-06-04 13:32:32,497 | INFO     | cat /etc/os-release:
[2025-06-04 09:32:52] NAME="CentOS Linux"
[2025-06-04 09:32:52] VERSION="7 (Core)"
[2025-06-04 09:32:52] ID="centos"
[2025-06-04 09:32:52] ID_LIKE="rhel fedora"
[2025-06-04 09:32:52] VERSION_ID="7"
[2025-06-04 09:32:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:32:52] ANSI_COLOR="0;31"
[2025-06-04 09:32:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:32:52] HOME_URL="https://www.centos.org/"
[2025-06-04 09:32:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:32:52] 
[2025-06-04 09:32:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:32:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:32:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:32:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:32:52] 
[2025-06-04 09:32:52] 2025-06-04 13:32:32,497 | INFO     | **************************************
[2025-06-04 09:32:52] 2025-06-04 13:32:33,000 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 09:32:52] 2025-06-04 13:32:33,012 | INFO     | sufficient remaining disk space (95397347328 B)
[2025-06-04 09:32:52] 2025-06-04 13:32:33,012 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:32:52] 2025-06-04 13:32:33,012 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:32:52] 2025-06-04 13:32:33,012 | INFO     | update_server=False
[2025-06-04 09:32:52] 2025-06-04 13:32:33,012 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:32:52] 2025-06-04 13:32:33,013 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:32:52] 2025-06-04 13:32:33,013 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:32:52] 2025-06-04 13:32:33,013 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:32:52] 2025-06-04 13:32:33,013 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:32:52] 2025-06-04 13:32:33,013 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:32:52] 2025-06-04 13:32:33,014 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:32:52] 2025-06-04 13:32:33,015 | INFO     | aborting loop
[2025-06-04 09:32:52] 2025-06-04 13:32:33,015 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:32:52] 2025-06-04 13:32:33,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:32:52] 2025-06-04 13:32:33,086 | INFO     | all data control threads have been joined
[2025-06-04 09:32:52] 2025-06-04 13:32:33,278 | INFO     | all job control threads have been joined
[2025-06-04 09:32:52] 2025-06-04 13:32:33,478 | INFO     | all payload control threads have been joined
[2025-06-04 09:32:52] 2025-06-04 13:32:34,018 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:32:52] 2025-06-04 13:32:34,019 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:32:52] 2025-06-04 13:32:34,019 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:32:52] 2025-06-04 13:32:34,091 | INFO     | [data] control thread has finished
[2025-06-04 09:32:52] 2025-06-04 13:32:34,283 | INFO     | [job] control thread has finished
[2025-06-04 09:32:52] 2025-06-04 13:32:34,484 | INFO     | [payload] control thread has finished
[2025-06-04 09:32:52] 2025-06-04 13:32:34,570 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:32:52] 2025-06-04 13:32:34,619 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:32:52] 2025-06-04 13:32:34,685 | INFO     | [job] validate thread has finished
[2025-06-04 09:32:52] 2025-06-04 13:32:34,829 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:32:52] 2025-06-04 13:32:34,942 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:32:52] 2025-06-04 13:32:35,020 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:32:52] 2025-06-04 13:32:35,084 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:32:52] 2025-06-04 13:32:35,462 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:32:52] 2025-06-04 13:32:37,015 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:32:52] 2025-06-04 13:32:43,755 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:32:52] 2025-06-04 13:32:44,760 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:32:52] 2025-06-04 13:32:46,834 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140617439672128)>', '<ExcThread(monitor, started 140616952440576)>']
[2025-06-04 09:32:52] 2025-06-04 13:32:47,077 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:32:52] 2025-06-04 13:32:47,077 | INFO     | [monitor] control thread has ended
[2025-06-04 09:32:52] 2025-06-04 13:32:51,859 | INFO     | all workflow threads have been joined
[2025-06-04 09:32:52] 2025-06-04 13:32:51,859 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:32:52] 2025-06-04 13:32:51,859 | INFO     | traces error code: 0
[2025-06-04 09:32:52] 2025-06-04 13:32:51,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:32:52] 2025-06-04 13:32:51,957 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:32:52] 2025-06-04 13:32:51,959 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:32:52] 2025-06-04 13:32:51,960 [wrapper] pilotpid: 3948681
[2025-06-04 09:32:52] 2025-06-04 13:32:51,962 [wrapper] Pilot exit status: 0
[2025-06-04 09:32:52] 2025-06-04 13:32:51,968 [wrapper] pandaids: 6666746568
[2025-06-04 09:32:52] 2025-06-04 13:32:52,010 [wrapper] cleanup supervisor_pilot 4189599 3948682
[2025-06-04 09:32:52] 2025-06-04 13:32:52,012 [wrapper] Test setup, not cleaning
[2025-06-04 09:32:52] 2025-06-04 13:32:52,013 [wrapper] apfmon messages muted
[2025-06-04 09:32:52] 2025-06-04 13:32:52,015 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:32:52] 2025-06-04 13:32:52,016 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:32:52]  *** Error codes and diagnostics ***
[2025-06-04 09:32:52]     "exeErrorCode": 0,
[2025-06-04 09:32:52]     "exeErrorDiag": "",
[2025-06-04 09:32:52]     "pilotErrorCode": 0,
[2025-06-04 09:32:52]     "pilotErrorDiag": "",
[2025-06-04 09:32:52]  *** Listing of results directory ***
[2025-06-04 09:32:52] total 413324
[2025-06-04 09:32:52] -rw-r--r--. 1 boincer umatlas    495897 May 26 23:05 pilot3.tar.gz
[2025-06-04 09:32:52] -rwx------. 1 boincer umatlas     37140 May 26 23:38 runpilot2-wrapper.sh
[2025-06-04 09:32:52] -rw-r--r--. 1 boincer umatlas      5111 May 26 23:38 queuedata.json
[2025-06-04 09:32:52] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:32:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:17 run_atlas
[2025-06-04 09:32:52] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:17 job.xml
[2025-06-04 09:32:52] -rw-r--r--. 2 boincer umatlas 224597378 Jun  4 08:17 EVNT.44871834._002431.pool.root.1
[2025-06-04 09:32:52] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:17 start_atlas.sh
[2025-06-04 09:32:52] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:17 shared
[2025-06-04 09:32:52] -rw-r--r--. 2 boincer umatlas    508875 Jun  4 08:17 input.tar.gz
[2025-06-04 09:32:52] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:17 boinc_lockfile
[2025-06-04 09:32:52] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 08:17 pandaJob.out
[2025-06-04 09:32:52] -rw-------. 1 boincer umatlas    986811 Jun  4 08:17 agis_schedconf.cvmfs.json
[2025-06-04 09:32:52] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:17 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:32:52] drwx------. 4 boincer umatlas      4096 Jun  4 08:17 pilot3
[2025-06-04 09:32:52] -rw-r--r--. 1 boincer umatlas      6859 Jun  4 09:31 init_data.xml
[2025-06-04 09:32:52] -rw-------. 1 boincer umatlas        95 Jun  4 09:31 pilot_heartbeat.json
[2025-06-04 09:32:52] -rw-------. 1 boincer umatlas 193319832 Jun  4 09:31 HITS.44871837._061601.pool.root.1
[2025-06-04 09:32:52] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:32 boinc_task_state.xml
[2025-06-04 09:32:52] -rw-------. 1 boincer umatlas      1032 Jun  4 09:32 memory_monitor_summary.json
[2025-06-04 09:32:52] -rw-------. 1 boincer umatlas    298139 Jun  4 09:32 log.44871837._061601.job.log.tgz.1
[2025-06-04 09:32:52] -rw-------. 1 boincer umatlas      7712 Jun  4 09:32 heartbeat.json
[2025-06-04 09:32:52] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:32 boinc_mmap_file
[2025-06-04 09:32:52] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:32 wrapper_checkpoint.txt
[2025-06-04 09:32:52] -rw-------. 1 boincer umatlas      4548 Jun  4 09:32 pilotlog.txt
[2025-06-04 09:32:52] -rw-------. 1 boincer umatlas    448473 Jun  4 09:32 log.44871837._061601.job.log.1
[2025-06-04 09:32:52] -rw-------. 1 boincer umatlas       357 Jun  4 09:32 output.list
[2025-06-04 09:32:52] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:32 runtime_log
[2025-06-04 09:32:52] -rw-------. 1 boincer umatlas    768000 Jun  4 09:32 result.tar.gz
[2025-06-04 09:32:52] -rw-------. 1 boincer umatlas       653 Jun  4 09:32 UoqMDmJK0d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzSYKDmcUIDem.diag
[2025-06-04 09:32:52] -rw-r--r--. 1 boincer umatlas      8669 Jun  4 09:32 runtime_log.err
[2025-06-04 09:32:52] -rw-r--r--. 1 boincer umatlas     21567 Jun  4 09:32 stderr.txt
[2025-06-04 09:32:52] HITS file was successfully produced:
[2025-06-04 09:32:52] -rw-------. 1 boincer umatlas 193319832 Jun  4 09:31 shared/HITS.pool.root.1
[2025-06-04 09:32:52]  *** Contents of shared directory: ***
[2025-06-04 09:32:52] total 409400
[2025-06-04 09:32:52] -rw-r--r--. 2 boincer umatlas 224597378 Jun  4 08:17 ATLAS.root_0
[2025-06-04 09:32:52] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:17 start_atlas.sh
[2025-06-04 09:32:52] -rw-r--r--. 2 boincer umatlas    508875 Jun  4 08:17 input.tar.gz
[2025-06-04 09:32:52] -rw-------. 1 boincer umatlas 193319832 Jun  4 09:31 HITS.pool.root.1
[2025-06-04 09:32:52] -rw-------. 1 boincer umatlas    768000 Jun  4 09:32 result.tar.gz
09:32:53 (3945064): run_atlas exited; CPU time 30309.501303
09:32:53 (3945064): called boinc_finish(0)

</stderr_txt>
]]>

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