Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:01:37 (2726444): wrapper (7.7.26015): starting
08:01:37 (2726444): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:01:37] Arguments: --nthreads 8
[2025-06-04 08:01:37] Threads: 8
[2025-06-04 08:01:37] Checking for CVMFS
[2025-06-04 08:01:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:01:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:01:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:01:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:01:37] 2.12.6.0 8406 37286 423216 146779 3 449 26475150 32935936 10337 16776704 1 319958687 99.648 287097993 22733 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:01:37] CVMFS is ok
[2025-06-04 08:01:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:01:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:01:37] Further information can be found at the LHC@home message board.
[2025-06-04 08:01:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:01:37] Checking for apptainer binary...
[2025-06-04 08:01:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:01:37] Running /usr/bin/apptainer --version
[2025-06-04 08:01:37] apptainer version 1.4.1-1.el9
[2025-06-04 08:01:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:01:37] c7-16-9.aglt2.org
[2025-06-04 08:01:37] apptainer works
[2025-06-04 08:01:37] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:01:37] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:01:37] Starting ATLAS job with PandaID=6678391555
[2025-06-04 08:01:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:56:52]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:56:52]  status_code=0
[2025-06-04 08:56:52]  storage_token=
[2025-06-04 08:56:52]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678391555/log.45006595._054917.job.log.tgz.1
[2025-06-04 08:56:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/b2/log.45006595._054917.job.log.tgz.1
[2025-06-04 08:56:52]  workdir=None
[2025-06-04 08:56:52] ]
[2025-06-04 08:56:52] 2025-06-04 12:56:26,415 | INFO     | transferring file log.45006595._054917.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678391555/log.45006595._054917.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:56:52] 2025-06-04 12:56:26,416 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678391555/log.45006595._054917.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._054917.job
[2025-06-04 08:56:52] 2025-06-04 12:56:26,436 | INFO     | adding to output.list: log.45006595._054917.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/b2/log.45006595._054917.job.log.tg
[2025-06-04 08:56:52] 2025-06-04 12:56:26,437 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:56:52] 2025-06-04 12:56:26,437 | INFO     | summary of transferred files:
[2025-06-04 08:56:52] 2025-06-04 12:56:26,437 | INFO     |  -- lfn=log.45006595._054917.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:56:52] 2025-06-04 12:56:26,437 | INFO     | stage-out finished correctly
[2025-06-04 08:56:52] 2025-06-04 12:56:26,514 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:56:52] 2025-06-04 12:56:29,094 | INFO     | job 6678391555 has state=finished
[2025-06-04 08:56:52] 2025-06-04 12:56:29,094 | INFO     | preparing for final server update for job 6678391555 in state='finished'
[2025-06-04 08:56:52] 2025-06-04 12:56:29,145 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 08:56:52] 2025-06-04 12:56:29,146 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:56:52] 2025-06-04 12:56:29,146 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:56:52] 2025-06-04 12:56:29,146 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:56:52] 2025-06-04 12:56:29,146 | INFO     | job 6678391555 has finished - writing final server update
[2025-06-04 08:56:52] 2025-06-04 12:56:29,146 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:56:52] 2025-06-04 12:56:29,163 | INFO     | executing command: lscpu
[2025-06-04 08:56:52] 2025-06-04 12:56:29,228 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:56:52] 2025-06-04 12:56:32,136 | WARNING  | process 2748107 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:56:52] 2025-06-04 12:56:32,137 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678391555/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:56:52] 2025-06-04 12:56:32,137 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678391555/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:56:52] 2025-06-04 12:56:32,138 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3497408 B
[2025-06-04 08:56:52] 2025-06-04 12:56:32,138 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15544 B
[2025-06-04 08:56:52] 2025-06-04 12:56:32,139 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 08:56:52] 2025-06-04 12:56:32,316 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:56:52] 2025-06-04 12:56:32,317 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678391555/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:56:52] 2025-06-04 12:56:32,323 | INFO     | extracted standard info from prmon json
[2025-06-04 08:56:52] 2025-06-04 12:56:32,323 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:56:52] 2025-06-04 12:56:32,323 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:56:52] 2025-06-04 12:56:32,324 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:56:52] 2025-06-04 12:56:32,324 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:56:52] 2025-06-04 12:56:32,326 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:56:52] 2025-06-04 12:56:32,326 | INFO     | sum of square deviations: 32179208.0
[2025-06-04 08:56:52] 2025-06-04 12:56:32,326 | INFO     | sum of deviations: 4144725093.0000005
[2025-06-04 08:56:52] 2025-06-04 12:56:32,326 | INFO     | mean x: 1749040239.0
[2025-06-04 08:56:52] 2025-06-04 12:56:32,326 | INFO     | mean y: 2136469.3829787234
[2025-06-04 08:56:52] 2025-06-04 12:56:32,326 | INFO     | -- intersect: -225276589074.45325
[2025-06-04 08:56:52] 2025-06-04 12:56:32,327 | INFO     | intersect: -225276589074.45325
[2025-06-04 08:56:52] 2025-06-04 12:56:32,327 | INFO     | chi2: 0.6939826676458225
[2025-06-04 08:56:52] 2025-06-04 12:56:32,327 | INFO     | -- intersect: -225276589074.45325
[2025-06-04 08:56:52] 2025-06-04 12:56:32,327 | INFO     | current memory leak: 128.80 B/s (using 47 data points, chi2=0.69)
[2025-06-04 08:56:52] 2025-06-04 12:56:32,327 | INFO     | ..............................
[2025-06-04 08:56:52] 2025-06-04 12:56:32,327 | INFO     | . Timing measurements:
[2025-06-04 08:56:52] 2025-06-04 12:56:32,327 | INFO     | . get job = 0 s
[2025-06-04 08:56:52] 2025-06-04 12:56:32,327 | INFO     | . initial setup = 2 s
[2025-06-04 08:56:52] 2025-06-04 12:56:32,327 | INFO     | . payload setup = 5 s
[2025-06-04 08:56:52] 2025-06-04 12:56:32,328 | INFO     | . stage-in = 0 s
[2025-06-04 08:56:52] 2025-06-04 12:56:32,328 | INFO     | . payload execution = 3254 s
[2025-06-04 08:56:52] 2025-06-04 12:56:32,328 | INFO     | . stage-out = 0 s
[2025-06-04 08:56:52] 2025-06-04 12:56:32,328 | INFO     | . log creation = 0 s
[2025-06-04 08:56:52] 2025-06-04 12:56:32,328 | INFO     | ..............................
[2025-06-04 08:56:52] 2025-06-04 12:56:32,354 | INFO     | sufficient remaining disk space (75555143680 B)
[2025-06-04 08:56:52] 2025-06-04 12:56:32,370 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 08:56:52] 2025-06-04 12:56:32,397 | INFO     | size of work directory /tmp/boinchome/slots/2/PanDA_Pilot-6678391555: 3801800 B (within 2537553920 B limit)
[2025-06-04 08:56:52] 2025-06-04 12:56:32,397 | INFO     | pfn file=/tmp/boinchome/slots/2/PanDA_Pilot-6678391555/HITS.45006595._054917.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 08:56:52] 2025-06-04 12:56:32,397 | INFO     | total size of present files: 0 B (workdir size: 3801800 B)
[2025-06-04 08:56:52] 2025-06-04 12:56:32,397 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6678391555/HITS.45006595._054917.pool.root.1 since it does not exist
[2025-06-04 08:56:52] 2025-06-04 12:56:32,511 | INFO     | 
[2025-06-04 08:56:52] 2025-06-04 12:56:32,511 | INFO     | job summary report
[2025-06-04 08:56:52] 2025-06-04 12:56:32,511 | INFO     | --------------------------------------------------
[2025-06-04 08:56:52] 2025-06-04 12:56:32,511 | INFO     | PanDA job id: 6678391555
[2025-06-04 08:56:52] 2025-06-04 12:56:32,511 | INFO     | task id: 45006595
[2025-06-04 08:56:52] 2025-06-04 12:56:32,512 | INFO     | errors: (none)
[2025-06-04 08:56:52] 2025-06-04 12:56:32,512 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:56:52] 2025-06-04 12:56:32,512 | INFO     | pilot state: finished 
[2025-06-04 08:56:52] 2025-06-04 12:56:32,512 | INFO     | transexitcode: 0
[2025-06-04 08:56:52] 2025-06-04 12:56:32,512 | INFO     | exeerrorcode: 0
[2025-06-04 08:56:52] 2025-06-04 12:56:32,512 | INFO     | exeerrordiag: 
[2025-06-04 08:56:52] 2025-06-04 12:56:32,512 | INFO     | exitcode: 0
[2025-06-04 08:56:52] 2025-06-04 12:56:32,512 | INFO     | exitmsg: OK
[2025-06-04 08:56:52] 2025-06-04 12:56:32,512 | INFO     | cpuconsumptiontime: 21415 s
[2025-06-04 08:56:52] 2025-06-04 12:56:32,513 | INFO     | nevents: 400
[2025-06-04 08:56:52] 2025-06-04 12:56:32,513 | INFO     | neventsw: 0
[2025-06-04 08:56:52] 2025-06-04 12:56:32,513 | INFO     | pid: 2748107
[2025-06-04 08:56:52] 2025-06-04 12:56:32,513 | INFO     | pgrp: 2748107
[2025-06-04 08:56:52] 2025-06-04 12:56:32,513 | INFO     | corecount: 8
[2025-06-04 08:56:52] 2025-06-04 12:56:32,513 | INFO     | event service: False
[2025-06-04 08:56:52] 2025-06-04 12:56:32,513 | INFO     | sizes: {0: 2397064, 1: 2397319, 5: 2397525, 11: 2397581, 3264: 2422975, 3265: 2431916, 3266: 2432100, 3271: 2432270}
[2025-06-04 08:56:52] 2025-06-04 12:56:32,513 | INFO     | --------------------------------------------------
[2025-06-04 08:56:52] 2025-06-04 12:56:32,514 | INFO     | 
[2025-06-04 08:56:52] 2025-06-04 12:56:32,514 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 08:56:52] 2025-06-04 12:56:32,533 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:56:52] 2025-06-04 12:56:32,533 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:56:52] 2025-06-04 12:56:32,534 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:56:52] 2025-06-04 12:56:32,534 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:56:52] 2025-06-04 12:56:32,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:56:52] 2025-06-04 12:56:32,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:56:52] 2025-06-04 12:56:32,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:56:52] 2025-06-04 12:56:32,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:56:52] 2025-06-04 12:56:32,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:56:52] 2025-06-04 12:56:32,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:56:52] 2025-06-04 12:56:32,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:56:52] 2025-06-04 12:56:32,535 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:56:52] 2025-06-04 12:56:32,535 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:56:52] 2025-06-04 12:56:32,535 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:56:52] 2025-06-04 12:56:32,535 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:56:52] 2025-06-04 12:56:32,535 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:56:52] 2025-06-04 12:56:32,535 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:56:52] 2025-06-04 12:56:32,535 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:56:52] 2025-06-04 12:56:32,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:56:52] 2025-06-04 12:56:32,535 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:56:52] 2025-06-04 12:56:32,536 | INFO     | job 6678391555 has completed (purged errors)
[2025-06-04 08:56:52] 2025-06-04 12:56:32,536 | INFO     | overall cleanup function is called
[2025-06-04 08:56:52] 2025-06-04 12:56:32,708 | INFO     | number of running child processes to parent process 2748107: 1
[2025-06-04 08:56:52] 2025-06-04 12:56:32,709 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:56:52] 2025-06-04 12:56:32,709 | INFO     | aborting job monitoring since job object (job id=6678391555) has expired
[2025-06-04 08:56:52] 2025-06-04 12:56:33,544 | INFO     | --- collectZombieJob: --- 10, [2748107]
[2025-06-04 08:56:52] 2025-06-04 12:56:33,544 | INFO     | zombie collector waiting for pid 2748107
[2025-06-04 08:56:52] 2025-06-04 12:56:33,544 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:56:52] 2025-06-04 12:56:33,544 | INFO     | collected zombie processes
[2025-06-04 08:56:52] 2025-06-04 12:56:33,544 | INFO     | will attempt to kill all subprocesses of pid=2748107
[2025-06-04 08:56:52] 2025-06-04 12:56:33,906 | INFO     | process IDs to be killed: [2748107] (in reverse order)
[2025-06-04 08:56:52] 2025-06-04 12:56:34,024 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:56:52] 2025-06-04 12:56:34,024 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:56:52] 2025-06-04 12:56:34,039 | INFO     | did not find any defunct processes belonging to 2748107
[2025-06-04 08:56:52] 2025-06-04 12:56:34,054 | INFO     | did not find any defunct processes belonging to 2748107
[2025-06-04 08:56:52] 2025-06-04 12:56:34,054 | INFO     | ready for new job
[2025-06-04 08:56:52] 2025-06-04 12:56:34,055 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:56:52] 2025-06-04 12:56:34,056 | INFO     | **************************************
[2025-06-04 08:56:52] 2025-06-04 12:56:34,056 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:56:52] 2025-06-04 12:56:34,056 | INFO     | **************************************
[2025-06-04 08:56:52] 2025-06-04 12:56:34,056 | INFO     | 
[2025-06-04 08:56:52] 2025-06-04 12:56:34,074 | INFO     | architecture information:
[2025-06-04 08:56:52] 2025-06-04 12:56:34,074 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:56:52] 2025-06-04 12:56:34,089 | INFO     | cat /etc/os-release:
[2025-06-04 08:56:52] NAME="CentOS Linux"
[2025-06-04 08:56:52] VERSION="7 (Core)"
[2025-06-04 08:56:52] ID="centos"
[2025-06-04 08:56:52] ID_LIKE="rhel fedora"
[2025-06-04 08:56:52] VERSION_ID="7"
[2025-06-04 08:56:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:56:52] ANSI_COLOR="0;31"
[2025-06-04 08:56:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:56:52] HOME_URL="https://www.centos.org/"
[2025-06-04 08:56:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:56:52] 
[2025-06-04 08:56:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:56:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:56:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:56:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:56:52] 
[2025-06-04 08:56:52] 2025-06-04 12:56:34,090 | INFO     | **************************************
[2025-06-04 08:56:52] 2025-06-04 12:56:34,592 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 08:56:52] 2025-06-04 12:56:34,610 | INFO     | sufficient remaining disk space (75559337984 B)
[2025-06-04 08:56:52] 2025-06-04 12:56:34,610 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:56:52] 2025-06-04 12:56:34,610 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:56:52] 2025-06-04 12:56:34,610 | INFO     | update_server=False
[2025-06-04 08:56:52] 2025-06-04 12:56:34,610 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:56:52] 2025-06-04 12:56:34,611 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:56:52] 2025-06-04 12:56:34,611 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:56:52] 2025-06-04 12:56:34,611 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:56:52] 2025-06-04 12:56:34,612 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:56:52] 2025-06-04 12:56:34,612 | INFO     | aborting loop
[2025-06-04 08:56:52] 2025-06-04 12:56:34,612 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:56:52] 2025-06-04 12:56:34,612 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:56:52] 2025-06-04 12:56:34,798 | INFO     | all data control threads have been joined
[2025-06-04 08:56:52] 2025-06-04 12:56:35,036 | INFO     | all payload control threads have been joined
[2025-06-04 08:56:52] 2025-06-04 12:56:35,616 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:56:52] 2025-06-04 12:56:35,618 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:56:52] 2025-06-04 12:56:35,804 | INFO     | [data] control thread has finished
[2025-06-04 08:56:52] 2025-06-04 12:56:35,914 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:56:52] 2025-06-04 12:56:36,038 | INFO     | [payload] control thread has finished
[2025-06-04 08:56:52] 2025-06-04 12:56:36,106 | INFO     | all job control threads have been joined
[2025-06-04 08:56:52] 2025-06-04 12:56:36,106 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:56:52] 2025-06-04 12:56:36,293 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:56:52] 2025-06-04 12:56:36,375 | INFO     | [job] validate thread has finished
[2025-06-04 08:56:52] 2025-06-04 12:56:36,390 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:56:52] 2025-06-04 12:56:36,617 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:56:52] 2025-06-04 12:56:36,748 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:56:52] 2025-06-04 12:56:36,763 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:56:52] 2025-06-04 12:56:37,100 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:56:52] 2025-06-04 12:56:37,112 | INFO     | [job] control thread has finished
[2025-06-04 08:56:52] 2025-06-04 12:56:37,406 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:56:52] 2025-06-04 12:56:38,412 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:56:52] 2025-06-04 12:56:41,106 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:56:52] 2025-06-04 12:56:45,036 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:56:52] 2025-06-04 12:56:46,041 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:56:52] 2025-06-04 12:56:47,674 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140000615040832)>', '<ExcThread(monitor, started 140000121300736)>']
[2025-06-04 08:56:52] 2025-06-04 12:56:48,674 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:56:52] 2025-06-04 12:56:48,674 | INFO     | [monitor] control thread has ended
[2025-06-04 08:56:52] 2025-06-04 12:56:52,680 | INFO     | all workflow threads have been joined
[2025-06-04 08:56:52] 2025-06-04 12:56:52,680 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:56:52] 2025-06-04 12:56:52,680 | INFO     | traces error code: 0
[2025-06-04 08:56:52] 2025-06-04 12:56:52,680 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:56:52] 2025-06-04 12:56:52,777 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:56:52] 2025-06-04 12:56:52,780 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:56:52] 2025-06-04 12:56:52,783 [wrapper] pilotpid: 2730810
[2025-06-04 08:56:52] 2025-06-04 12:56:52,786 [wrapper] Pilot exit status: 0
[2025-06-04 08:56:52] 2025-06-04 12:56:52,796 [wrapper] pandaids: 6678391555
[2025-06-04 08:56:52] 2025-06-04 12:56:52,879 [wrapper] cleanup supervisor_pilot 2901997 2730811
[2025-06-04 08:56:52] 2025-06-04 12:56:52,881 [wrapper] Test setup, not cleaning
[2025-06-04 08:56:52] 2025-06-04 12:56:52,883 [wrapper] apfmon messages muted
[2025-06-04 08:56:52] 2025-06-04 12:56:52,886 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:56:52] 2025-06-04 12:56:52,887 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:56:52]  *** Error codes and diagnostics ***
[2025-06-04 08:56:52]     "exeErrorCode": 0,
[2025-06-04 08:56:52]     "exeErrorDiag": "",
[2025-06-04 08:56:52]     "pilotErrorCode": 0,
[2025-06-04 08:56:52]     "pilotErrorDiag": "",
[2025-06-04 08:56:52]  *** Listing of results directory ***
[2025-06-04 08:56:52] total 396612
[2025-06-04 08:56:52] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:04 pilot3.tar.gz
[2025-06-04 08:56:52] -rwx------. 1 boincer umatlas     37140 Jun  4 03:33 runpilot2-wrapper.sh
[2025-06-04 08:56:52] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:33 queuedata.json
[2025-06-04 08:56:52] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:56:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:01 run_atlas
[2025-06-04 08:56:52] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:01 job.xml
[2025-06-04 08:56:52] -rw-r--r--. 2 boincer umatlas 215443568 Jun  4 08:01 EVNT.45006593._002197.pool.root.1
[2025-06-04 08:56:52] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:01 start_atlas.sh
[2025-06-04 08:56:52] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:01 shared
[2025-06-04 08:56:52] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 08:01 input.tar.gz
[2025-06-04 08:56:52] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:01 boinc_lockfile
[2025-06-04 08:56:52] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 08:01 pandaJob.out
[2025-06-04 08:56:52] -rw-------. 1 boincer umatlas    986812 Jun  4 08:01 agis_schedconf.cvmfs.json
[2025-06-04 08:56:52] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:01 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:56:52] drwx------. 4 boincer umatlas      4096 Jun  4 08:01 pilot3
[2025-06-04 08:56:52] -rw-------. 1 boincer umatlas        95 Jun  4 08:56 pilot_heartbeat.json
[2025-06-04 08:56:52] -rw-r--r--. 1 boincer umatlas      6933 Jun  4 08:56 init_data.xml
[2025-06-04 08:56:52] -rw-------. 1 boincer umatlas 185586550 Jun  4 08:56 HITS.45006595._054917.pool.root.1
[2025-06-04 08:56:52] -rw-r--r--. 1 boincer umatlas       530 Jun  4 08:56 boinc_task_state.xml
[2025-06-04 08:56:52] -rw-------. 1 boincer umatlas      1022 Jun  4 08:56 memory_monitor_summary.json
[2025-06-04 08:56:52] -rw-------. 1 boincer umatlas    296081 Jun  4 08:56 log.45006595._054917.job.log.tgz.1
[2025-06-04 08:56:52] -rw-------. 1 boincer umatlas      7678 Jun  4 08:56 heartbeat.json
[2025-06-04 08:56:52] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:56 boinc_mmap_file
[2025-06-04 08:56:52] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:56 wrapper_checkpoint.txt
[2025-06-04 08:56:52] -rw-------. 1 boincer umatlas      4548 Jun  4 08:56 pilotlog.txt
[2025-06-04 08:56:52] -rw-------. 1 boincer umatlas    336039 Jun  4 08:56 log.45006595._054917.job.log.1
[2025-06-04 08:56:52] -rw-------. 1 boincer umatlas       357 Jun  4 08:56 output.list
[2025-06-04 08:56:52] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:56 runtime_log
[2025-06-04 08:56:52] -rw-------. 1 boincer umatlas    655360 Jun  4 08:56 result.tar.gz
[2025-06-04 08:56:52] -rw-------. 1 boincer umatlas       649 Jun  4 08:56 wQxLDmCoxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmddnKDmbYmobm.diag
[2025-06-04 08:56:52] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 08:56 runtime_log.err
[2025-06-04 08:56:52] -rw-r--r--. 1 boincer umatlas     22325 Jun  4 08:56 stderr.txt
[2025-06-04 08:56:52] HITS file was successfully produced:
[2025-06-04 08:56:52] -rw-------. 1 boincer umatlas 185586550 Jun  4 08:56 shared/HITS.pool.root.1
[2025-06-04 08:56:52]  *** Contents of shared directory: ***
[2025-06-04 08:56:52] total 392796
[2025-06-04 08:56:52] -rw-r--r--. 2 boincer umatlas 215443568 Jun  4 08:01 ATLAS.root_0
[2025-06-04 08:56:52] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:01 start_atlas.sh
[2025-06-04 08:56:52] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 08:01 input.tar.gz
[2025-06-04 08:56:52] -rw-------. 1 boincer umatlas 185586550 Jun  4 08:56 HITS.pool.root.1
[2025-06-04 08:56:52] -rw-------. 1 boincer umatlas    655360 Jun  4 08:56 result.tar.gz
08:56:54 (2726444): run_atlas exited; CPU time 21512.616913
08:56:54 (2726444): called boinc_finish(0)

</stderr_txt>
]]>

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