Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:26:16 (2424919): wrapper (7.7.26015): starting
00:26:16 (2424919): wrapper: running run_atlas (--nthreads 6)
[2025-06-05 00:26:16] Arguments: --nthreads 6
[2025-06-05 00:26:16] Threads: 6
[2025-06-05 00:26:16] Checking for CVMFS
[2025-06-05 00:26:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:26:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:26:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:26:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:26:16] 2.11.5.0 4066018 2454 76028 146786 3 186 47934072 52428800 1740 130560 0 7098903 99.997 672708 103 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-05 00:26:16] CVMFS is ok
[2025-06-05 00:26:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:26:16] Checking for apptainer binary...
[2025-06-05 00:26:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 00:26:16] Running /usr/bin/apptainer --version
[2025-06-05 00:26:16] apptainer version 1.3.5-1.el9
[2025-06-05 00:26:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:26:16] testio008
[2025-06-05 00:26:16] apptainer works
[2025-06-05 00:26:16] Set ATHENA_PROC_NUMBER=6
[2025-06-05 00:26:16] Set ATHENA_CORE_NUMBER=6
[2025-06-05 00:26:16] Starting ATLAS job with PandaID=6678718730
[2025-06-05 00:26:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:30:27]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:30:27]  guid=c18d4d61-67cb-4ba7-9bfc-bf40abe217ab
[2025-06-05 01:30:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 01:30:27]  is_altstaged=None
[2025-06-05 01:30:27]  is_tar=False
[2025-06-05 01:30:27]  lfn=log.45006595._055515.job.log.tgz.1
[2025-06-05 01:30:27]  mtime=0
[2025-06-05 01:30:27]  protocol_id=None
[2025-06-05 01:30:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 01:30:27]  replicas=None
[2025-06-05 01:30:27]  scope=mc23_13p6TeV
[2025-06-05 01:30:27]  status=None
[2025-06-05 01:30:27]  status_code=0
[2025-06-05 01:30:27]  storage_token=
[2025-06-05 01:30:27]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6678718730/log.45006595._055515.job.log.tgz.1
[2025-06-05 01:30:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/b3/log.45006595._055515.job.log.tgz.1
[2025-06-05 01:30:27]  workdir=None
[2025-06-05 01:30:27] ]
[2025-06-05 01:30:27] 2025-06-04 16:30:11,660 | INFO     | transferring file log.45006595._055515.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6678718730/log.45006595._055515.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-05 01:30:27] 2025-06-04 16:30:11,660 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6678718730/log.45006595._055515.job.log.tgz.1 /var/lib/boinc/slots/2/log.45006595._055515.job
[2025-06-05 01:30:27] 2025-06-04 16:30:11,668 | INFO     | adding to output.list: log.45006595._055515.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/b3/log.45006595._055515.job.log.tg
[2025-06-05 01:30:27] 2025-06-04 16:30:11,668 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 01:30:27] 2025-06-04 16:30:11,668 | INFO     | summary of transferred files:
[2025-06-05 01:30:27] 2025-06-04 16:30:11,668 | INFO     |  -- lfn=log.45006595._055515.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 01:30:27] 2025-06-04 16:30:11,668 | INFO     | stage-out finished correctly
[2025-06-05 01:30:27] 2025-06-04 16:30:11,705 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 01:30:27] 2025-06-04 16:30:13,476 | INFO     | job 6678718730 has state=finished
[2025-06-05 01:30:27] 2025-06-04 16:30:13,476 | INFO     | preparing for final server update for job 6678718730 in state='finished'
[2025-06-05 01:30:27] 2025-06-04 16:30:13,477 | INFO     | this job has now completed (state=finished)
[2025-06-05 01:30:27] 2025-06-04 16:30:13,477 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 01:30:27] 2025-06-04 16:30:13,477 | INFO     | log transfer has been attempted: DONE
[2025-06-05 01:30:27] 2025-06-04 16:30:13,477 | INFO     | job 6678718730 has finished - writing final server update
[2025-06-05 01:30:27] 2025-06-04 16:30:13,477 | INFO     | total number of processed events: 400 (read)
[2025-06-05 01:30:27] 2025-06-04 16:30:13,478 | INFO     | executing command: lscpu
[2025-06-05 01:30:27] 2025-06-04 16:30:13,490 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 01:30:27] 2025-06-04 16:30:14,891 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 01:30:27] 2025-06-04 16:30:14,892 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6678718730/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:30:27] 2025-06-04 16:30:14,892 | INFO     | extracted standard info from prmon json
[2025-06-05 01:30:27] 2025-06-04 16:30:14,892 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:30:27] 2025-06-04 16:30:14,892 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:30:27] 2025-06-04 16:30:14,893 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:30:27] 2025-06-04 16:30:14,893 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:30:27] 2025-06-04 16:30:14,893 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:30:27] 2025-06-04 16:30:14,894 | INFO     | sum of square deviations: 54438230.0
[2025-06-05 01:30:27] 2025-06-04 16:30:14,894 | INFO     | sum of deviations: 8485260155.499999
[2025-06-05 01:30:27] 2025-06-04 16:30:14,894 | INFO     | mean x: 1749052782.5
[2025-06-05 01:30:27] 2025-06-04 16:30:14,894 | INFO     | mean y: 2402611.410714286
[2025-06-05 01:30:27] 2025-06-04 16:30:14,894 | INFO     | -- intersect: -272621594994.93427
[2025-06-05 01:30:27] 2025-06-04 16:30:14,894 | INFO     | intersect: -272621594994.93427
[2025-06-05 01:30:27] 2025-06-04 16:30:14,894 | INFO     | chi2: 1.4578450405759082
[2025-06-05 01:30:27] 2025-06-04 16:30:14,894 | INFO     | -- intersect: -272621594994.93427
[2025-06-05 01:30:27] 2025-06-04 16:30:14,894 | INFO     | current memory leak: 155.87 B/s (using 56 data points, chi2=1.46)
[2025-06-05 01:30:27] 2025-06-04 16:30:14,894 | INFO     | ..............................
[2025-06-05 01:30:27] 2025-06-04 16:30:14,894 | INFO     | . Timing measurements:
[2025-06-05 01:30:27] 2025-06-04 16:30:14,894 | INFO     | . get job = 0 s
[2025-06-05 01:30:27] 2025-06-04 16:30:14,894 | INFO     | . initial setup = 4 s
[2025-06-05 01:30:27] 2025-06-04 16:30:14,895 | INFO     | . payload setup = 2 s
[2025-06-05 01:30:27] 2025-06-04 16:30:14,895 | INFO     | . stage-in = 0 s
[2025-06-05 01:30:27] 2025-06-04 16:30:14,895 | INFO     | . payload execution = 3809 s
[2025-06-05 01:30:27] 2025-06-04 16:30:14,895 | INFO     | . stage-out = 0 s
[2025-06-05 01:30:27] 2025-06-04 16:30:14,895 | INFO     | . log creation = 0 s
[2025-06-05 01:30:27] 2025-06-04 16:30:14,895 | INFO     | ..............................
[2025-06-05 01:30:27] 2025-06-04 16:30:14,933 | INFO     | 
[2025-06-05 01:30:27] 2025-06-04 16:30:14,933 | INFO     | job summary report
[2025-06-05 01:30:27] 2025-06-04 16:30:14,933 | INFO     | --------------------------------------------------
[2025-06-05 01:30:27] 2025-06-04 16:30:14,933 | INFO     | PanDA job id: 6678718730
[2025-06-05 01:30:27] 2025-06-04 16:30:14,933 | INFO     | task id: 45006595
[2025-06-05 01:30:27] 2025-06-04 16:30:14,933 | INFO     | errors: (none)
[2025-06-05 01:30:27] 2025-06-04 16:30:14,933 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:30:27] 2025-06-04 16:30:14,933 | INFO     | pilot state: finished 
[2025-06-05 01:30:27] 2025-06-04 16:30:14,933 | INFO     | transexitcode: 0
[2025-06-05 01:30:27] 2025-06-04 16:30:14,933 | INFO     | exeerrorcode: 0
[2025-06-05 01:30:27] 2025-06-04 16:30:14,933 | INFO     | exeerrordiag: 
[2025-06-05 01:30:27] 2025-06-04 16:30:14,933 | INFO     | exitcode: 0
[2025-06-05 01:30:27] 2025-06-04 16:30:14,933 | INFO     | exitmsg: OK
[2025-06-05 01:30:27] 2025-06-04 16:30:14,933 | INFO     | cpuconsumptiontime: 18361 s
[2025-06-05 01:30:27] 2025-06-04 16:30:14,933 | INFO     | nevents: 400
[2025-06-05 01:30:27] 2025-06-04 16:30:14,933 | INFO     | neventsw: 0
[2025-06-05 01:30:27] 2025-06-04 16:30:14,933 | INFO     | pid: 2435237
[2025-06-05 01:30:27] 2025-06-04 16:30:14,933 | INFO     | pgrp: 2435237
[2025-06-05 01:30:27] 2025-06-04 16:30:14,934 | INFO     | corecount: 6
[2025-06-05 01:30:27] 2025-06-04 16:30:14,934 | INFO     | event service: False
[2025-06-05 01:30:27] 2025-06-04 16:30:14,934 | INFO     | sizes: {0: 2397286, 1: 2397492, 10: 2397520, 3815: 2423256, 3816: 2432253, 3819: 2432367}
[2025-06-05 01:30:27] 2025-06-04 16:30:14,934 | INFO     | --------------------------------------------------
[2025-06-05 01:30:27] 2025-06-04 16:30:14,934 | INFO     | 
[2025-06-05 01:30:27] 2025-06-04 16:30:14,934 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-06-05 01:30:27] 2025-06-04 16:30:14,945 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:30:27] 2025-06-04 16:30:14,945 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:30:27] 2025-06-04 16:30:14,945 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:30:27] 2025-06-04 16:30:14,945 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:30:27] 2025-06-04 16:30:14,945 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:30:27] 2025-06-04 16:30:14,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:30:27] 2025-06-04 16:30:14,945 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:30:27] 2025-06-04 16:30:14,945 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:30:27] 2025-06-04 16:30:14,945 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:30:27] 2025-06-04 16:30:14,946 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:30:27] 2025-06-04 16:30:14,946 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:30:27] 2025-06-04 16:30:14,946 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:30:27] 2025-06-04 16:30:14,946 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:30:27] 2025-06-04 16:30:14,946 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:30:27] 2025-06-04 16:30:14,946 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:30:27] 2025-06-04 16:30:14,946 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:30:27] 2025-06-04 16:30:14,946 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:30:27] 2025-06-04 16:30:14,946 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:30:27] 2025-06-04 16:30:14,946 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:30:27] 2025-06-04 16:30:14,946 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:30:27] 2025-06-04 16:30:14,946 | INFO     | job 6678718730 has completed (purged errors)
[2025-06-05 01:30:27] 2025-06-04 16:30:14,946 | INFO     | overall cleanup function is called
[2025-06-05 01:30:27] 2025-06-04 16:30:15,952 | INFO     | --- collectZombieJob: --- 10, [2435237]
[2025-06-05 01:30:27] 2025-06-04 16:30:15,953 | INFO     | zombie collector waiting for pid 2435237
[2025-06-05 01:30:27] 2025-06-04 16:30:15,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:30:27] 2025-06-04 16:30:15,953 | INFO     | collected zombie processes
[2025-06-05 01:30:27] 2025-06-04 16:30:15,953 | INFO     | will attempt to kill all subprocesses of pid=2435237
[2025-06-05 01:30:27] 2025-06-04 16:30:16,005 | INFO     | process IDs to be killed: [2435237] (in reverse order)
[2025-06-05 01:30:27] 2025-06-04 16:30:16,029 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:30:27] 2025-06-04 16:30:16,030 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:30:27] 2025-06-04 16:30:16,032 | INFO     | did not find any defunct processes belonging to 2435237
[2025-06-05 01:30:27] 2025-06-04 16:30:16,034 | INFO     | did not find any defunct processes belonging to 2435237
[2025-06-05 01:30:27] 2025-06-04 16:30:16,035 | INFO     | ready for new job
[2025-06-05 01:30:27] 2025-06-04 16:30:16,035 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:30:27] 2025-06-04 16:30:16,036 | INFO     | **************************************
[2025-06-05 01:30:27] 2025-06-04 16:30:16,036 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:30:27] 2025-06-04 16:30:16,036 | INFO     | **************************************
[2025-06-05 01:30:27] 2025-06-04 16:30:16,036 | INFO     | 
[2025-06-05 01:30:27] 2025-06-04 16:30:16,036 | INFO     | architecture information:
[2025-06-05 01:30:27] 2025-06-04 16:30:16,036 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:30:27] 2025-06-04 16:30:16,045 | INFO     | cat /etc/os-release:
[2025-06-05 01:30:27] NAME="CentOS Linux"
[2025-06-05 01:30:27] VERSION="7 (Core)"
[2025-06-05 01:30:27] ID="centos"
[2025-06-05 01:30:27] ID_LIKE="rhel fedora"
[2025-06-05 01:30:27] VERSION_ID="7"
[2025-06-05 01:30:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:30:27] ANSI_COLOR="0;31"
[2025-06-05 01:30:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:30:27] HOME_URL="https://www.centos.org/"
[2025-06-05 01:30:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:30:27] 
[2025-06-05 01:30:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:30:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:30:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:30:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:30:27] 
[2025-06-05 01:30:27] 2025-06-04 16:30:16,045 | INFO     | **************************************
[2025-06-05 01:30:27] 2025-06-04 16:30:16,548 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-06-05 01:30:27] 2025-06-04 16:30:16,555 | INFO     | sufficient remaining disk space (276421410816 B)
[2025-06-05 01:30:27] 2025-06-04 16:30:16,555 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:30:27] 2025-06-04 16:30:16,556 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:30:27] 2025-06-04 16:30:16,556 | INFO     | update_server=False
[2025-06-05 01:30:27] 2025-06-04 16:30:16,556 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:30:27] 2025-06-04 16:30:16,556 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:30:27] 2025-06-04 16:30:16,556 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 01:30:27] 2025-06-04 16:30:16,556 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:30:27] 2025-06-04 16:30:16,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:30:27] 2025-06-04 16:30:16,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:30:27] 2025-06-04 16:30:17,103 | INFO     | all job control threads have been joined
[2025-06-05 01:30:27] 2025-06-04 16:30:17,180 | WARNING  | process 2435237 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 01:30:27] 2025-06-04 16:30:17,213 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:30:27] 2025-06-04 16:30:17,216 | INFO     | job.realtimelogging is not enabled
[2025-06-05 01:30:27] 2025-06-04 16:30:17,225 | INFO     | using path: /var/lib/boinc/slots/2/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:30:27] 2025-06-04 16:30:17,277 | INFO     | number of running child processes to parent process 2435237: 1
[2025-06-05 01:30:27] 2025-06-04 16:30:17,277 | INFO     | maximum number of monitored processes: 6
[2025-06-05 01:30:27] 2025-06-04 16:30:17,277 | INFO     | aborting job monitoring since job object (job id=6678718730) has expired
[2025-06-05 01:30:27] 2025-06-04 16:30:17,277 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:30:27] 2025-06-04 16:30:17,277 | INFO     | will abort loop
[2025-06-05 01:30:27] 2025-06-04 16:30:17,420 | INFO     | all data control threads have been joined
[2025-06-05 01:30:27] 2025-06-04 16:30:17,561 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:30:27] 2025-06-04 16:30:17,561 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:30:27] 2025-06-04 16:30:17,580 | INFO     | all payload control threads have been joined
[2025-06-05 01:30:27] 2025-06-04 16:30:17,745 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:30:27] 2025-06-04 16:30:17,796 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:30:27] 2025-06-04 16:30:18,106 | INFO     | [job] control thread has finished
[2025-06-05 01:30:27] 2025-06-04 16:30:18,221 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:30:27] 2025-06-04 16:30:18,233 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:30:27] 2025-06-04 16:30:18,282 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:30:27] 2025-06-04 16:30:18,425 | INFO     | [data] control thread has finished
[2025-06-05 01:30:27] 2025-06-04 16:30:18,499 | INFO     | [job] validate thread has finished
[2025-06-05 01:30:27] 2025-06-04 16:30:18,542 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:30:27] 2025-06-04 16:30:18,586 | INFO     | [payload] control thread has finished
[2025-06-05 01:30:27] 2025-06-04 16:30:18,829 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:30:27] 2025-06-04 16:30:18,847 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:30:27] 2025-06-04 16:30:19,069 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:30:27] 2025-06-04 16:30:19,218 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:30:27] 2025-06-04 16:30:21,751 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:30:27] 2025-06-04 16:30:21,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140275250804544)>', '<ExcThread(monitor, started 140274613339904)>']
[2025-06-05 01:30:27] 2025-06-04 16:30:22,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:30:27] 2025-06-04 16:30:22,583 | INFO     | [monitor] control thread has ended
[2025-06-05 01:30:27] 2025-06-04 16:30:26,939 | INFO     | all workflow threads have been joined
[2025-06-05 01:30:27] 2025-06-04 16:30:26,939 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:30:27] 2025-06-04 16:30:26,939 | INFO     | traces error code: 0
[2025-06-05 01:30:27] 2025-06-04 16:30:26,939 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:30:27] 2025-06-04 16:30:26,994 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:30:27] 2025-06-04 16:30:26,995 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:30:27] 2025-06-04 16:30:26,997 [wrapper] pilotpid: 2428657
[2025-06-05 01:30:27] 2025-06-04 16:30:26,998 [wrapper] Pilot exit status: 0
[2025-06-05 01:30:27] 2025-06-04 16:30:27,002 [wrapper] pandaids: 6678718730
[2025-06-05 01:30:27] 2025-06-04 16:30:27,013 [wrapper] cleanup supervisor_pilot 2470026 2428658
[2025-06-05 01:30:27] 2025-06-04 16:30:27,014 [wrapper] Test setup, not cleaning
[2025-06-05 01:30:27] 2025-06-04 16:30:27,015 [wrapper] apfmon messages muted
[2025-06-05 01:30:27] 2025-06-04 16:30:27,016 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:30:27] 2025-06-04 16:30:27,017 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:30:27]  *** Error codes and diagnostics ***
[2025-06-05 01:30:27]     "exeErrorCode": 0,
[2025-06-05 01:30:27]     "exeErrorDiag": "",
[2025-06-05 01:30:27]     "pilotErrorCode": 0,
[2025-06-05 01:30:27]     "pilotErrorDiag": "",
[2025-06-05 01:30:27]  *** Listing of results directory ***
[2025-06-05 01:30:27] total 384412
[2025-06-05 01:30:27] -rw-r--r--. 1 boinc boinc    495897 Jun  4 16:34 pilot3.tar.gz
[2025-06-05 01:30:27] -rw-r--r--. 1 boinc boinc      5111 Jun  4 16:51 queuedata.json
[2025-06-05 01:30:27] -rwx------. 1 boinc boinc     37140 Jun  4 16:53 runpilot2-wrapper.sh
[2025-06-05 01:30:27] -rw-r--r--. 1 boinc boinc       100 Jun  5 00:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:30:27] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 00:26 run_atlas
[2025-06-05 01:30:27] -rw-r--r--. 1 boinc boinc       105 Jun  5 00:26 job.xml
[2025-06-05 01:30:27] -rw-r--r--. 2 boinc boinc 214987961 Jun  5 00:26 EVNT.45006593._000317.pool.root.1
[2025-06-05 01:30:27] -rw-r--r--. 2 boinc boinc     15093 Jun  5 00:26 start_atlas.sh
[2025-06-05 01:30:27] drwxrwx--x. 2 boinc boinc        68 Jun  5 00:26 shared
[2025-06-05 01:30:27] -rw-r--r--. 2 boinc boinc    508883 Jun  5 00:26 input.tar.gz
[2025-06-05 01:30:27] -rw-r--r--. 1 boinc boinc      9509 Jun  5 00:26 init_data.xml
[2025-06-05 01:30:27] -rw-r--r--. 1 boinc boinc         0 Jun  5 00:26 boinc_lockfile
[2025-06-05 01:30:27] -rw-r--r--. 1 boinc boinc      2522 Jun  5 00:26 pandaJob.out
[2025-06-05 01:30:27] -rw-------. 1 boinc boinc    990989 Jun  5 00:26 agis_schedconf.cvmfs.json
[2025-06-05 01:30:27] -rw-------. 1 boinc boinc   1598969 Jun  5 00:26 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:30:27] drwx------. 4 boinc boinc      4096 Jun  5 00:26 pilot3
[2025-06-05 01:30:27] -rw-------. 1 boinc boinc        95 Jun  5 01:29 pilot_heartbeat.json
[2025-06-05 01:30:27] -rw-------. 1 boinc boinc 173510447 Jun  5 01:29 HITS.45006595._055515.pool.root.1
[2025-06-05 01:30:27] -rw-r--r--. 1 boinc boinc       529 Jun  5 01:29 boinc_task_state.xml
[2025-06-05 01:30:27] -rw-------. 1 boinc boinc      1016 Jun  5 01:30 memory_monitor_summary.json
[2025-06-05 01:30:27] -rw-------. 1 boinc boinc    263746 Jun  5 01:30 log.45006595._055515.job.log.tgz.1
[2025-06-05 01:30:27] -rw-------. 1 boinc boinc      7658 Jun  5 01:30 heartbeat.json
[2025-06-05 01:30:27] -rw-r--r--. 1 boinc boinc      8192 Jun  5 01:30 boinc_mmap_file
[2025-06-05 01:30:27] -rw-r--r--. 1 boinc boinc        27 Jun  5 01:30 wrapper_checkpoint.txt
[2025-06-05 01:30:27] -rw-------. 1 boinc boinc      5070 Jun  5 01:30 pilotlog.txt
[2025-06-05 01:30:27] -rw-------. 1 boinc boinc    396170 Jun  5 01:30 log.45006595._055515.job.log.1
[2025-06-05 01:30:27] -rw-------. 1 boinc boinc       357 Jun  5 01:30 output.list
[2025-06-05 01:30:27] -rw-r--r--. 1 boinc boinc       620 Jun  5 01:30 runtime_log
[2025-06-05 01:30:27] -rw-------. 1 boinc boinc    675840 Jun  5 01:30 result.tar.gz
[2025-06-05 01:30:27] -rw-r--r--. 1 boinc boinc      8617 Jun  5 01:30 runtime_log.err
[2025-06-05 01:30:27] -rw-------. 1 boinc boinc       641 Jun  5 01:30 pkbNDm76xg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0knKDmBkZmvn.diag
[2025-06-05 01:30:27] -rw-r--r--. 1 boinc boinc     20959 Jun  5 01:30 stderr.txt
[2025-06-05 01:30:27] HITS file was successfully produced:
[2025-06-05 01:30:27] -rw-------. 1 boinc boinc 173510447 Jun  5 01:29 shared/HITS.pool.root.1
[2025-06-05 01:30:27]  *** Contents of shared directory: ***
[2025-06-05 01:30:27] total 380572
[2025-06-05 01:30:27] -rw-r--r--. 2 boinc boinc 214987961 Jun  5 00:26 ATLAS.root_0
[2025-06-05 01:30:27] -rw-r--r--. 2 boinc boinc     15093 Jun  5 00:26 start_atlas.sh
[2025-06-05 01:30:27] -rw-r--r--. 2 boinc boinc    508883 Jun  5 00:26 input.tar.gz
[2025-06-05 01:30:27] -rw-------. 1 boinc boinc 173510447 Jun  5 01:29 HITS.pool.root.1
[2025-06-05 01:30:27] -rw-------. 1 boinc boinc    675840 Jun  5 01:30 result.tar.gz
01:30:28 (2424919): run_atlas exited; CPU time 18385.396259
01:30:28 (2424919): called boinc_finish(0)

</stderr_txt>
]]>

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