Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:29:38 (22726): wrapper (7.7.26015): starting
22:29:38 (22726): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 22:29:38] Arguments: --nthreads 8
[2025-06-04 22:29:38] Threads: 8
[2025-06-04 22:29:38] Checking for CVMFS
[2025-06-04 22:29:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:29:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:29:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:29:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:29:42] 2.11.2.0 30898 33678 90356 146793 3 159 15567938 25165825 3632 130560 0 17171381 99.798 19862609 2345 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 22:29:42] CVMFS is ok
[2025-06-04 22:29:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:29:42] Checking for apptainer binary...
[2025-06-04 22:29:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:29:42] Running /usr/bin/apptainer --version
[2025-06-04 22:29:42] apptainer version 1.3.2-1.el7
[2025-06-04 22:29:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:29:54] cg-vwn285.simple-grid.lan
[2025-06-04 22:29:54] apptainer works
[2025-06-04 22:29:54] Set ATHENA_PROC_NUMBER=8
[2025-06-04 22:29:54] Set ATHENA_CORE_NUMBER=8
[2025-06-04 22:29:54] Starting ATLAS job with PandaID=6678392599
[2025-06-04 22:29:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:23:51]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:23:51] 2025-06-05 00:20:32,395 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:23:51] 2025-06-05 00:20:32,396 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:23:51] 2025-06-05 00:20:32,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:23:51] 2025-06-05 00:20:32,401 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:23:51] 2025-06-05 00:20:32,402 | INFO     | sum of square deviations: 3485088600.0
[2025-06-05 03:23:51] 2025-06-05 00:20:32,405 | INFO     | sum of deviations: -19907253040.5
[2025-06-05 03:23:51] 2025-06-05 00:20:32,405 | INFO     | mean x: 1749075886.5
[2025-06-05 03:23:51] 2025-06-05 00:20:32,405 | INFO     | mean y: 2497450.71875
[2025-06-05 03:23:51] 2025-06-05 00:20:32,405 | INFO     | -- intersect: 9993433193.239717
[2025-06-05 03:23:51] 2025-06-05 00:20:32,405 | INFO     | intersect: 9993433193.239717
[2025-06-05 03:23:51] 2025-06-05 00:20:32,406 | INFO     | chi2: 2.6626950696640623
[2025-06-05 03:23:51] 2025-06-05 00:20:32,407 | INFO     | sum of square deviations: 3256879670.0
[2025-06-05 03:23:51] 2025-06-05 00:20:32,409 | INFO     | sum of deviations: -4719066078.999993
[2025-06-05 03:23:51] 2025-06-05 00:20:32,410 | INFO     | mean x: 1749075734.0
[2025-06-05 03:23:51] 2025-06-05 00:20:32,410 | INFO     | mean y: 2507421.296803653
[2025-06-05 03:23:51] 2025-06-05 00:20:32,410 | INFO     | -- intersect: 2536836227.4701724
[2025-06-05 03:23:51] 2025-06-05 00:20:32,410 | INFO     | intersect: 2536836227.4701724
[2025-06-05 03:23:51] 2025-06-05 00:20:32,414 | INFO     | chi2: 1.8975177839517672
[2025-06-05 03:23:51] 2025-06-05 00:20:32,414 | INFO     | current chi2=1.8975177839517672 (change=28.736947554750735 %)
[2025-06-05 03:23:51] 2025-06-05 00:20:32,414 | INFO     | sum of square deviations: 3038856977.5
[2025-06-05 03:23:51] 2025-06-05 00:20:32,416 | INFO     | sum of deviations: -4586214331.499995
[2025-06-05 03:23:51] 2025-06-05 00:20:32,416 | INFO     | mean x: 1749075581.5
[2025-06-05 03:23:51] 2025-06-05 00:20:32,417 | INFO     | mean y: 2507514.285046729
[2025-06-05 03:23:51] 2025-06-05 00:20:32,417 | INFO     | -- intersect: 2642195909.6735024
[2025-06-05 03:23:51] 2025-06-05 00:20:32,417 | INFO     | intersect: 2642195909.6735024
[2025-06-05 03:23:51] 2025-06-05 00:20:32,417 | INFO     | chi2: 1.8971208429483442
[2025-06-05 03:23:51] 2025-06-05 00:20:32,417 | INFO     | current chi2=1.8971208429483442 (change=0.020918960906724942 %)
[2025-06-05 03:23:51] 2025-06-05 00:20:32,417 | INFO     | right removable region: 213
[2025-06-05 03:23:51] 2025-06-05 00:20:32,418 | INFO     | sum of square deviations: 3256879670.0
[2025-06-05 03:23:51] 2025-06-05 00:20:32,420 | INFO     | sum of deviations: -58985121993.0
[2025-06-05 03:23:51] 2025-06-05 00:20:32,420 | INFO     | mean x: 1749076039.0
[2025-06-05 03:23:51] 2025-06-05 00:20:32,420 | INFO     | mean y: 2523344.264840183
[2025-06-05 03:23:51] 2025-06-05 00:20:32,420 | INFO     | -- intersect: 31679918271.00103
[2025-06-05 03:23:51] 2025-06-05 00:20:32,420 | INFO     | intersect: 31679918271.00103
[2025-06-05 03:23:51] 2025-06-05 00:20:32,421 | INFO     | chi2: 1.0049846268625942
[2025-06-05 03:23:51] 2025-06-05 00:20:32,421 | INFO     | current chi2=1.0049846268625942 (change=62.256863795170226 %)
[2025-06-05 03:23:51] 2025-06-05 00:20:32,421 | INFO     | sum of square deviations: 3038856977.5
[2025-06-05 03:23:51] 2025-06-05 00:20:32,426 | INFO     | sum of deviations: -56909115672.50001
[2025-06-05 03:23:51] 2025-06-05 00:20:32,427 | INFO     | mean x: 1749076191.5
[2025-06-05 03:23:51] 2025-06-05 00:20:32,427 | INFO     | mean y: 2521855.313084112
[2025-06-05 03:23:51] 2025-06-05 00:20:32,427 | INFO     | -- intersect: 32757725551.663837
[2025-06-05 03:23:51] 2025-06-05 00:20:32,427 | INFO     | intersect: 32757725551.663837
[2025-06-05 03:23:51] 2025-06-05 00:20:32,427 | INFO     | chi2: 0.9905215743975648
[2025-06-05 03:23:51] 2025-06-05 00:20:32,428 | INFO     | current chi2=0.9905215743975648 (change=1.43913171191292 %)
[2025-06-05 03:23:51] 2025-06-05 00:20:32,428 | INFO     | left removable region: 20
[2025-06-05 03:23:51] 2025-06-05 00:20:32,428 | INFO     | sum of square deviations: 2229146912.0
[2025-06-05 03:23:51] 2025-06-05 00:20:32,430 | INFO     | sum of deviations: -27800906648.0
[2025-06-05 03:23:51] 2025-06-05 00:20:32,430 | INFO     | mean x: 1749076161.0
[2025-06-05 03:23:51] 2025-06-05 00:20:32,430 | INFO     | mean y: 2523143.792746114
[2025-06-05 03:23:51] 2025-06-05 00:20:32,430 | INFO     | -- intersect: 21816205683.260662
[2025-06-05 03:23:51] 2025-06-05 00:20:32,430 | INFO     | intersect: 21816205683.260662
[2025-06-05 03:23:51] 2025-06-05 00:20:32,430 | INFO     | chi2: 0.17263023386390372
[2025-06-05 03:23:51] 2025-06-05 00:20:32,431 | INFO     | -- intersect: 21816205683.260662
[2025-06-05 03:23:51] 2025-06-05 00:20:32,431 | INFO     | current memory leak: -12.47 B/s (using 193 data points, chi2=0.17)
[2025-06-05 03:23:51] 2025-06-05 00:20:32,432 | INFO     | ..............................
[2025-06-05 03:23:51] 2025-06-05 00:20:32,432 | INFO     | . Timing measurements:
[2025-06-05 03:23:51] 2025-06-05 00:20:32,432 | INFO     | . get job = 0 s
[2025-06-05 03:23:51] 2025-06-05 00:20:32,432 | INFO     | . initial setup = 2 s
[2025-06-05 03:23:51] 2025-06-05 00:20:32,432 | INFO     | . payload setup = 15 s
[2025-06-05 03:23:51] 2025-06-05 00:20:32,432 | INFO     | . stage-in = 0 s
[2025-06-05 03:23:51] 2025-06-05 00:20:32,432 | INFO     | . payload execution = 13666 s
[2025-06-05 03:23:51] 2025-06-05 00:20:32,432 | INFO     | . stage-out = 9 s
[2025-06-05 03:23:51] 2025-06-05 00:20:32,432 | INFO     | . log creation = 1 s
[2025-06-05 03:23:51] 2025-06-05 00:20:32,433 | INFO     | ..............................
[2025-06-05 03:23:51] 2025-06-05 00:20:32,778 | INFO     | 
[2025-06-05 03:23:51] 2025-06-05 00:20:32,779 | INFO     | job summary report
[2025-06-05 03:23:51] 2025-06-05 00:20:32,779 | INFO     | --------------------------------------------------
[2025-06-05 03:23:51] 2025-06-05 00:20:32,779 | INFO     | PanDA job id: 6678392599
[2025-06-05 03:23:51] 2025-06-05 00:20:32,779 | INFO     | task id: 45006595
[2025-06-05 03:23:51] 2025-06-05 00:20:32,779 | INFO     | errors: (none)
[2025-06-05 03:23:51] 2025-06-05 00:20:32,779 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:23:51] 2025-06-05 00:20:32,779 | INFO     | pilot state: finished 
[2025-06-05 03:23:51] 2025-06-05 00:20:32,779 | INFO     | transexitcode: 0
[2025-06-05 03:23:51] 2025-06-05 00:20:32,780 | INFO     | exeerrorcode: 0
[2025-06-05 03:23:51] 2025-06-05 00:20:32,780 | INFO     | exeerrordiag: 
[2025-06-05 03:23:51] 2025-06-05 00:20:32,780 | INFO     | exitcode: 0
[2025-06-05 03:23:51] 2025-06-05 00:20:32,780 | INFO     | exitmsg: OK
[2025-06-05 03:23:51] 2025-06-05 00:20:32,780 | INFO     | cpuconsumptiontime: 51964 s
[2025-06-05 03:23:51] 2025-06-05 00:20:32,780 | INFO     | nevents: 400
[2025-06-05 03:23:51] 2025-06-05 00:20:32,780 | INFO     | neventsw: 0
[2025-06-05 03:23:51] 2025-06-05 00:20:32,780 | INFO     | pid: 2920
[2025-06-05 03:23:51] 2025-06-05 00:20:32,780 | INFO     | pgrp: 2920
[2025-06-05 03:23:51] 2025-06-05 00:20:32,781 | INFO     | corecount: 8
[2025-06-05 03:23:51] 2025-06-05 00:20:32,781 | INFO     | event service: False
[2025-06-05 03:23:51] 2025-06-05 00:20:32,781 | INFO     | sizes: {0: 2397172, 1: 2397371, 9: 2397577, 12: 2397605, 13686: 2427296, 13696: 2436239, 13697: 2436423, 13789: 2436593}
[2025-06-05 03:23:51] 2025-06-05 00:20:32,781 | INFO     | --------------------------------------------------
[2025-06-05 03:23:51] 2025-06-05 00:20:32,781 | INFO     | 
[2025-06-05 03:23:51] 2025-06-05 00:20:32,781 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-06-05 03:23:51] 2025-06-05 00:20:32,878 | INFO     | PID=28744 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 03:23:51] 2025-06-05 00:20:32,879 | INFO     | .. there are 9 such processes running
[2025-06-05 03:23:51] 2025-06-05 00:20:33,342 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:23:51] 2025-06-05 00:20:33,342 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:23:51] 2025-06-05 00:20:33,342 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:23:51] 2025-06-05 00:20:33,342 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:23:51] 2025-06-05 00:20:33,342 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:23:51] 2025-06-05 00:20:33,342 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:23:51] 2025-06-05 00:20:33,342 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:23:51] 2025-06-05 00:20:33,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:23:51] 2025-06-05 00:20:33,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:23:51] 2025-06-05 00:20:33,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:23:51] 2025-06-05 00:20:33,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:23:51] 2025-06-05 00:20:33,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:23:51] 2025-06-05 00:20:33,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:23:51] 2025-06-05 00:20:33,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:23:51] 2025-06-05 00:20:33,343 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:23:51] 2025-06-05 00:20:33,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:23:51] 2025-06-05 00:20:33,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:23:51] 2025-06-05 00:20:33,344 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:23:51] 2025-06-05 00:20:33,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:23:51] 2025-06-05 00:20:33,344 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:23:51] 2025-06-05 00:20:33,344 | INFO     | job 6678392599 has completed (purged errors)
[2025-06-05 03:23:51] 2025-06-05 00:20:33,344 | INFO     | overall cleanup function is called
[2025-06-05 03:23:51] 2025-06-05 00:20:33,880 | INFO     | 13814s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 03:23:51] 2025-06-05 00:20:34,353 | INFO     | --- collectZombieJob: --- 10, [2920]
[2025-06-05 03:23:51] 2025-06-05 00:20:34,354 | INFO     | zombie collector waiting for pid 2920
[2025-06-05 03:23:51] 2025-06-05 00:20:34,354 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:23:51] 2025-06-05 00:20:34,354 | INFO     | collected zombie processes
[2025-06-05 03:23:51] 2025-06-05 00:20:34,354 | INFO     | will attempt to kill all subprocesses of pid=2920
[2025-06-05 03:23:51] 2025-06-05 00:20:34,501 | INFO     | process IDs to be killed: [2920] (in reverse order)
[2025-06-05 03:23:51] 2025-06-05 00:20:35,484 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:23:51] 2025-06-05 00:20:35,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:23:51] 2025-06-05 00:20:35,488 | INFO     | did not find any defunct processes belonging to 2920
[2025-06-05 03:23:51] 2025-06-05 00:20:35,491 | INFO     | did not find any defunct processes belonging to 2920
[2025-06-05 03:23:51] 2025-06-05 00:20:35,491 | INFO     | ready for new job
[2025-06-05 03:23:51] 2025-06-05 00:20:35,491 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:23:51] 2025-06-05 00:20:35,493 | INFO     | **************************************
[2025-06-05 03:23:51] 2025-06-05 00:20:35,493 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:23:51] 2025-06-05 00:20:35,493 | INFO     | **************************************
[2025-06-05 03:23:51] 2025-06-05 00:20:35,494 | INFO     | 
[2025-06-05 03:23:51] 2025-06-05 00:20:35,494 | INFO     | pilot is running in a VM
[2025-06-05 03:23:51] 2025-06-05 00:20:35,494 | INFO     | architecture information:
[2025-06-05 03:23:51] 2025-06-05 00:20:35,509 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:23:51] 2025-06-05 00:20:35,761 | INFO     | cat /etc/os-release:
[2025-06-05 03:23:51] NAME="CentOS Linux"
[2025-06-05 03:23:51] VERSION="7 (Core)"
[2025-06-05 03:23:51] ID="centos"
[2025-06-05 03:23:51] ID_LIKE="rhel fedora"
[2025-06-05 03:23:51] VERSION_ID="7"
[2025-06-05 03:23:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:23:51] ANSI_COLOR="0;31"
[2025-06-05 03:23:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:23:51] HOME_URL="https://www.centos.org/"
[2025-06-05 03:23:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:23:51] 
[2025-06-05 03:23:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:23:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:23:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:23:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:23:51] 
[2025-06-05 03:23:51] 2025-06-05 00:20:35,761 | INFO     | **************************************
[2025-06-05 03:23:51] 2025-06-05 00:20:36,264 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-06-05 03:23:51] 2025-06-05 00:20:36,505 | INFO     | sufficient remaining disk space (497172873216 B)
[2025-06-05 03:23:51] 2025-06-05 00:20:36,505 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:23:51] 2025-06-05 00:20:36,506 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:23:51] 2025-06-05 00:20:36,506 | INFO     | update_server=False
[2025-06-05 03:23:51] 2025-06-05 00:20:36,506 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:23:51] 2025-06-05 00:20:36,507 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:23:51] 2025-06-05 00:20:36,734 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:23:51] 2025-06-05 00:20:36,735 | INFO     | aborting loop
[2025-06-05 03:23:51] 2025-06-05 00:20:36,850 | INFO     | all data control threads have been joined
[2025-06-05 03:23:51] 2025-06-05 00:20:36,895 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:23:51] 2025-06-05 00:20:36,896 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:23:51] 2025-06-05 00:20:36,896 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:23:51] 2025-06-05 00:20:36,998 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:23:51] 2025-06-05 00:20:37,166 | INFO     | all job control threads have been joined
[2025-06-05 03:23:51] 2025-06-05 00:20:37,512 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:23:51] 2025-06-05 00:20:37,636 | INFO     | all payload control threads have been joined
[2025-06-05 03:23:51] 2025-06-05 00:20:37,708 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:23:51] 2025-06-05 00:20:37,722 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:23:51] 2025-06-05 00:20:37,740 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:23:51] 2025-06-05 00:20:37,856 | INFO     | [data] control thread has finished
[2025-06-05 03:23:51] 2025-06-05 00:20:37,895 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:23:51] 2025-06-05 00:20:37,974 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:23:51] 2025-06-05 00:20:38,172 | INFO     | [job] control thread has finished
[2025-06-05 03:23:51] 2025-06-05 00:20:38,189 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:23:51] 2025-06-05 00:20:38,486 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:23:51] 2025-06-05 00:20:38,514 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:23:51] 2025-06-05 00:20:38,576 | INFO     | [job] validate thread has finished
[2025-06-05 03:23:51] 2025-06-05 00:20:38,642 | INFO     | [payload] control thread has finished
[2025-06-05 03:23:51] 2025-06-05 00:20:38,714 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:23:51] 2025-06-05 00:20:38,868 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:23:51] 2025-06-05 00:20:38,876 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:23:51] 2025-06-05 00:20:41,008 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:23:51] 2025-06-05 00:20:43,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139697588107072)>', '<ExcThread(monitor, started 139697141565184)>']
[2025-06-05 03:23:51] 2025-06-05 00:20:43,936 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:23:51] 2025-06-05 00:20:43,937 | INFO     | [monitor] control thread has ended
[2025-06-05 03:23:51] 2025-06-05 00:20:48,080 | INFO     | all workflow threads have been joined
[2025-06-05 03:23:51] 2025-06-05 00:20:48,081 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:23:51] 2025-06-05 00:20:48,081 | INFO     | traces error code: 0
[2025-06-05 03:23:51] 2025-06-05 00:20:48,081 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:23:51] 2025-06-05 00:20:48,329 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:23:51] 2025-06-05 00:20:48,345 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:23:51] 2025-06-05 00:20:48,366 [wrapper] pilotpid: 28744
[2025-06-05 03:23:51] 2025-06-05 00:20:48,392 [wrapper] Pilot exit status: 0
[2025-06-05 03:23:51] 2025-06-05 00:20:48,939 [wrapper] pandaids: 6678392599
[2025-06-05 03:23:51] 2025-06-05 00:20:49,937 [wrapper] cleanup supervisor_pilot 29464 28745
[2025-06-05 03:23:51] 2025-06-05 00:20:50,001 [wrapper] Test setup, not cleaning
[2025-06-05 03:23:51] 2025-06-05 00:20:50,069 [wrapper] apfmon messages muted
[2025-06-05 03:23:51] 2025-06-05 00:20:50,148 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:23:51] 2025-06-05 00:20:50,270 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:23:51]  *** Error codes and diagnostics ***
[2025-06-05 03:23:51]     "exeErrorCode": 0,
[2025-06-05 03:23:51]     "exeErrorDiag": "",
[2025-06-05 03:23:51]     "pilotErrorCode": 0,
[2025-06-05 03:23:51]     "pilotErrorDiag": "",
[2025-06-05 03:23:51]  *** Listing of results directory ***
[2025-06-05 03:23:51] total 288396
[2025-06-05 03:23:51] -rw-r--r--. 1 boinc boinc    495897 Jun  4 09:34 pilot3.tar.gz
[2025-06-05 03:23:51] -rw-r--r--. 1 boinc boinc      5111 Jun  4 09:42 queuedata.json
[2025-06-05 03:23:51] -rwx------. 1 boinc boinc     37140 Jun  4 09:43 runpilot2-wrapper.sh
[2025-06-05 03:23:51] -rw-r--r--. 1 boinc boinc       100 Jun  4 22:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:23:51] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 22:29 run_atlas
[2025-06-05 03:23:51] -rw-r--r--. 1 boinc boinc       105 Jun  4 22:29 job.xml
[2025-06-05 03:23:51] -rw-r--r--. 2 boinc boinc 108405889 Jun  4 22:29 EVNT.45006593._002212.pool.root.1
[2025-06-05 03:23:51] -rw-r--r--. 1 boinc boinc      6392 Jun  4 22:29 init_data.xml
[2025-06-05 03:23:51] -rw-r--r--. 2 boinc boinc     15093 Jun  4 22:29 start_atlas.sh
[2025-06-05 03:23:51] drwxrwx--x. 2 boinc boinc        68 Jun  4 22:29 shared
[2025-06-05 03:23:51] -rw-r--r--. 2 boinc boinc    508880 Jun  4 22:29 input.tar.gz
[2025-06-05 03:23:51] -rw-r--r--. 1 boinc boinc         0 Jun  4 22:29 boinc_lockfile
[2025-06-05 03:23:51] -rw-r--r--. 1 boinc boinc      2525 Jun  4 22:29 pandaJob.out
[2025-06-05 03:23:51] -rw-------. 1 boinc boinc    987032 Jun  4 22:30 agis_schedconf.cvmfs.json
[2025-06-05 03:23:51] drwx------. 4 boinc boinc      4096 Jun  4 22:30 pilot3
[2025-06-05 03:23:51] -rw-------. 1 boinc boinc 179961664 Jun  5 02:17 HITS.45006595._055282.pool.root.1
[2025-06-05 03:23:51] -rw-r--r--. 1 boinc boinc       531 Jun  5 02:17 boinc_task_state.xml
[2025-06-05 03:23:51] -rw-------. 1 boinc boinc      1016 Jun  5 02:18 memory_monitor_summary.json
[2025-06-05 03:23:51] -rw-------. 1 boinc boinc   1598969 Jun  5 02:18 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:23:51] -rw-------. 1 boinc boinc    374297 Jun  5 02:18 log.45006595._055282.job.log.tgz.1
[2025-06-05 03:23:51] -rw-------. 1 boinc boinc        95 Jun  5 02:20 pilot_heartbeat.json
[2025-06-05 03:23:51] -rw-------. 1 boinc boinc      7686 Jun  5 02:20 heartbeat.json
[2025-06-05 03:23:51] -rw-------. 1 boinc boinc      4417 Jun  5 02:20 pilotlog.txt
[2025-06-05 03:23:51] -rw-------. 1 boinc boinc   1191421 Jun  5 02:20 log.45006595._055282.job.log.1
[2025-06-05 03:23:51] -rw-------. 1 boinc boinc       357 Jun  5 02:20 output.list
[2025-06-05 03:23:51] -rw-r--r--. 1 boinc boinc       620 Jun  5 02:20 runtime_log
[2025-06-05 03:23:51] -rw-------. 1 boinc boinc   1587200 Jun  5 02:20 result.tar.gz
[2025-06-05 03:23:51] -rw-r--r--. 1 boinc boinc      8673 Jun  5 02:20 runtime_log.err
[2025-06-05 03:23:51] -rw-------. 1 boinc boinc       657 Jun  5 02:20 ghWKDm9xxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCinKDmOaUD4m.diag
[2025-06-05 03:23:51] -rw-r--r--. 1 boinc boinc      8192 Jun  5 03:23 boinc_mmap_file
[2025-06-05 03:23:51] -rw-r--r--. 1 boinc boinc        28 Jun  5 03:23 wrapper_checkpoint.txt
[2025-06-05 03:23:51] -rw-r--r--. 1 boinc boinc     20566 Jun  5 03:23 stderr.txt
[2025-06-05 03:23:51] HITS file was successfully produced:
[2025-06-05 03:23:51] -rw-------. 1 boinc boinc 179961664 Jun  5 02:17 shared/HITS.pool.root.1
[2025-06-05 03:23:51]  *** Contents of shared directory: ***
[2025-06-05 03:23:51] total 283680
[2025-06-05 03:23:51] -rw-r--r--. 2 boinc boinc 108405889 Jun  4 22:29 ATLAS.root_0
[2025-06-05 03:23:51] -rw-r--r--. 2 boinc boinc     15093 Jun  4 22:29 start_atlas.sh
[2025-06-05 03:23:51] -rw-r--r--. 2 boinc boinc    508880 Jun  4 22:29 input.tar.gz
[2025-06-05 03:23:51] -rw-------. 1 boinc boinc 179961664 Jun  5 02:17 HITS.pool.root.1
[2025-06-05 03:23:51] -rw-------. 1 boinc boinc   1587200 Jun  5 02:20 result.tar.gz
03:23:53 (22726): run_atlas exited; CPU time 52144.007669
03:23:53 (22726): called boinc_finish(0)

</stderr_txt>
]]>

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