Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:59:50 (1264186): wrapper (7.7.26015): starting
07:59:50 (1264186): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:59:50] Arguments: --nthreads 8
[2025-06-04 07:59:50] Threads: 8
[2025-06-04 07:59:50] Checking for CVMFS
[2025-06-04 07:59:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:59:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:59:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:59:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:59:50] 2.12.6.0 7692 37278 215972 146779 1 995 38528888 40960000 44930 16776704 1 470281748 99.768 276824190 34460 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:59:50] CVMFS is ok
[2025-06-04 07:59:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:59:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:59:50] Further information can be found at the LHC@home message board.
[2025-06-04 07:59:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:59:50] Checking for apptainer binary...
[2025-06-04 07:59:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:59:50] Running /usr/bin/apptainer --version
[2025-06-04 07:59:50] apptainer version 1.4.1-1.el9
[2025-06-04 07:59:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:59:51] c8-7-4.aglt2.org
[2025-06-04 07:59:51] apptainer works
[2025-06-04 07:59:51] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:59:51] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:59:51] Starting ATLAS job with PandaID=6678391601
[2025-06-04 07:59:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:51:18]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:51:18]  is_altstaged=None
[2025-06-04 08:51:18]  is_tar=False
[2025-06-04 08:51:18]  lfn=log.45006595._054963.job.log.tgz.1
[2025-06-04 08:51:18]  mtime=0
[2025-06-04 08:51:18]  protocol_id=None
[2025-06-04 08:51:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:51:18]  replicas=None
[2025-06-04 08:51:18]  scope=mc23_13p6TeV
[2025-06-04 08:51:18]  status=None
[2025-06-04 08:51:18]  status_code=0
[2025-06-04 08:51:18]  storage_token=
[2025-06-04 08:51:18]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678391601/log.45006595._054963.job.log.tgz.1
[2025-06-04 08:51:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/7c/log.45006595._054963.job.log.tgz.1
[2025-06-04 08:51:18]  workdir=None
[2025-06-04 08:51:18] ]
[2025-06-04 08:51:18] 2025-06-04 12:50:53,867 | INFO     | transferring file log.45006595._054963.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678391601/log.45006595._054963.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:51:18] 2025-06-04 12:50:53,868 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678391601/log.45006595._054963.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._054963.job
[2025-06-04 08:51:18] 2025-06-04 12:50:53,884 | INFO     | adding to output.list: log.45006595._054963.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/7c/log.45006595._054963.job.log.tg
[2025-06-04 08:51:18] 2025-06-04 12:50:53,885 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:51:18] 2025-06-04 12:50:53,885 | INFO     | summary of transferred files:
[2025-06-04 08:51:18] 2025-06-04 12:50:53,885 | INFO     |  -- lfn=log.45006595._054963.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:51:18] 2025-06-04 12:50:53,885 | INFO     | stage-out finished correctly
[2025-06-04 08:51:18] 2025-06-04 12:50:53,929 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:51:18] 2025-06-04 12:50:53,961 | INFO     | job 6678391601 has state=finished
[2025-06-04 08:51:18] 2025-06-04 12:50:53,961 | INFO     | preparing for final server update for job 6678391601 in state='finished'
[2025-06-04 08:51:18] 2025-06-04 12:50:53,961 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:51:18] 2025-06-04 12:50:53,962 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:51:18] 2025-06-04 12:50:53,962 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:51:18] 2025-06-04 12:50:53,962 | INFO     | job 6678391601 has finished - writing final server update
[2025-06-04 08:51:18] 2025-06-04 12:50:53,962 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:51:18] 2025-06-04 12:50:53,979 | INFO     | executing command: lscpu
[2025-06-04 08:51:18] 2025-06-04 12:50:54,039 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:51:18] 2025-06-04 12:50:58,143 | WARNING  | process 1281670 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:51:18] 2025-06-04 12:50:58,143 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678391601/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:51:18] 2025-06-04 12:50:58,519 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:51:18] 2025-06-04 12:50:58,520 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678391601/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:51:18] 2025-06-04 12:50:58,520 | INFO     | extracted standard info from prmon json
[2025-06-04 08:51:18] 2025-06-04 12:50:58,520 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:51:18] 2025-06-04 12:50:58,520 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:51:18] 2025-06-04 12:50:58,521 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:51:18] 2025-06-04 12:50:58,521 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:51:18] 2025-06-04 12:50:58,522 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:51:18] 2025-06-04 12:50:58,522 | INFO     | sum of square deviations: 24640462.0
[2025-06-04 08:51:18] 2025-06-04 12:50:58,522 | INFO     | sum of deviations: 3842816816.999999
[2025-06-04 08:51:18] 2025-06-04 12:50:58,522 | INFO     | mean x: 1749040035.0
[2025-06-04 08:51:18] 2025-06-04 12:50:58,522 | INFO     | mean y: 2426883.511627907
[2025-06-04 08:51:18] 2025-06-04 12:50:58,522 | INFO     | -- intersect: -272770074707.74374
[2025-06-04 08:51:18] 2025-06-04 12:50:58,522 | INFO     | intersect: -272770074707.74374
[2025-06-04 08:51:18] 2025-06-04 12:50:58,523 | INFO     | chi2: 0.6435530725849149
[2025-06-04 08:51:18] 2025-06-04 12:50:58,523 | INFO     | -- intersect: -272770074707.74374
[2025-06-04 08:51:18] 2025-06-04 12:50:58,523 | INFO     | current memory leak: 155.96 B/s (using 43 data points, chi2=0.64)
[2025-06-04 08:51:18] 2025-06-04 12:50:58,523 | INFO     | ..............................
[2025-06-04 08:51:18] 2025-06-04 12:50:58,523 | INFO     | . Timing measurements:
[2025-06-04 08:51:18] 2025-06-04 12:50:58,523 | INFO     | . get job = 0 s
[2025-06-04 08:51:18] 2025-06-04 12:50:58,523 | INFO     | . initial setup = 2 s
[2025-06-04 08:51:18] 2025-06-04 12:50:58,523 | INFO     | . payload setup = 11 s
[2025-06-04 08:51:18] 2025-06-04 12:50:58,523 | INFO     | . stage-in = 0 s
[2025-06-04 08:51:18] 2025-06-04 12:50:58,524 | INFO     | . payload execution = 3009 s
[2025-06-04 08:51:18] 2025-06-04 12:50:58,524 | INFO     | . stage-out = 0 s
[2025-06-04 08:51:18] 2025-06-04 12:50:58,524 | INFO     | . log creation = 0 s
[2025-06-04 08:51:18] 2025-06-04 12:50:58,524 | INFO     | ..............................
[2025-06-04 08:51:18] 2025-06-04 12:50:58,574 | INFO     | 
[2025-06-04 08:51:18] 2025-06-04 12:50:58,576 | INFO     | job summary report
[2025-06-04 08:51:18] 2025-06-04 12:50:58,577 | INFO     | --------------------------------------------------
[2025-06-04 08:51:18] 2025-06-04 12:50:58,577 | INFO     | PanDA job id: 6678391601
[2025-06-04 08:51:18] 2025-06-04 12:50:58,577 | INFO     | task id: 45006595
[2025-06-04 08:51:18] 2025-06-04 12:50:58,577 | INFO     | errors: (none)
[2025-06-04 08:51:18] 2025-06-04 12:50:58,577 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:51:18] 2025-06-04 12:50:58,577 | INFO     | pilot state: finished 
[2025-06-04 08:51:18] 2025-06-04 12:50:58,577 | INFO     | transexitcode: 0
[2025-06-04 08:51:18] 2025-06-04 12:50:58,577 | INFO     | exeerrorcode: 0
[2025-06-04 08:51:18] 2025-06-04 12:50:58,577 | INFO     | exeerrordiag: 
[2025-06-04 08:51:18] 2025-06-04 12:50:58,577 | INFO     | exitcode: 0
[2025-06-04 08:51:18] 2025-06-04 12:50:58,577 | INFO     | exitmsg: OK
[2025-06-04 08:51:18] 2025-06-04 12:50:58,577 | INFO     | cpuconsumptiontime: 18911 s
[2025-06-04 08:51:18] 2025-06-04 12:50:58,577 | INFO     | nevents: 400
[2025-06-04 08:51:18] 2025-06-04 12:50:58,577 | INFO     | neventsw: 0
[2025-06-04 08:51:18] 2025-06-04 12:50:58,577 | INFO     | pid: 1281670
[2025-06-04 08:51:18] 2025-06-04 12:50:58,577 | INFO     | pgrp: 1281670
[2025-06-04 08:51:18] 2025-06-04 12:50:58,577 | INFO     | corecount: 8
[2025-06-04 08:51:18] 2025-06-04 12:50:58,578 | INFO     | event service: False
[2025-06-04 08:51:18] 2025-06-04 12:50:58,578 | INFO     | sizes: {0: 2397342, 8: 2397548, 11: 2397576, 3024: 2422936, 3025: 2431933, 3030: 2432047}
[2025-06-04 08:51:18] 2025-06-04 12:50:58,578 | INFO     | --------------------------------------------------
[2025-06-04 08:51:18] 2025-06-04 12:50:58,578 | INFO     | 
[2025-06-04 08:51:18] 2025-06-04 12:50:58,578 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 08:51:18] 2025-06-04 12:50:58,596 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:51:18] 2025-06-04 12:50:58,596 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:51:18] 2025-06-04 12:50:58,596 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:51:18] 2025-06-04 12:50:58,596 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:51:18] 2025-06-04 12:50:58,596 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:51:18] 2025-06-04 12:50:58,596 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:51:18] 2025-06-04 12:50:58,596 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:51:18] 2025-06-04 12:50:58,596 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:51:18] 2025-06-04 12:50:58,596 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:51:18] 2025-06-04 12:50:58,596 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:51:18] 2025-06-04 12:50:58,596 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:51:18] 2025-06-04 12:50:58,596 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:51:18] 2025-06-04 12:50:58,596 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:51:18] 2025-06-04 12:50:58,596 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:51:18] 2025-06-04 12:50:58,597 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:51:18] 2025-06-04 12:50:58,597 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:51:18] 2025-06-04 12:50:58,597 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:51:18] 2025-06-04 12:50:58,597 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:51:18] 2025-06-04 12:50:58,597 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:51:18] 2025-06-04 12:50:58,597 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:51:18] 2025-06-04 12:50:58,597 | INFO     | job 6678391601 has completed (purged errors)
[2025-06-04 08:51:18] 2025-06-04 12:50:58,597 | INFO     | overall cleanup function is called
[2025-06-04 08:51:18] 2025-06-04 12:50:58,633 | INFO     | number of running child processes to parent process 1281670: 1
[2025-06-04 08:51:18] 2025-06-04 12:50:58,634 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:51:18] 2025-06-04 12:50:58,634 | INFO     | aborting job monitoring since job object (job id=6678391601) has expired
[2025-06-04 08:51:18] 2025-06-04 12:50:59,604 | INFO     | --- collectZombieJob: --- 10, [1281670]
[2025-06-04 08:51:18] 2025-06-04 12:50:59,604 | INFO     | zombie collector waiting for pid 1281670
[2025-06-04 08:51:18] 2025-06-04 12:50:59,604 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:51:18] 2025-06-04 12:50:59,604 | INFO     | collected zombie processes
[2025-06-04 08:51:18] 2025-06-04 12:50:59,604 | INFO     | will attempt to kill all subprocesses of pid=1281670
[2025-06-04 08:51:18] 2025-06-04 12:51:00,029 | INFO     | process IDs to be killed: [1281670] (in reverse order)
[2025-06-04 08:51:18] 2025-06-04 12:51:00,207 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:51:18] 2025-06-04 12:51:00,207 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:51:18] 2025-06-04 12:51:00,233 | INFO     | did not find any defunct processes belonging to 1281670
[2025-06-04 08:51:18] 2025-06-04 12:51:00,267 | INFO     | did not find any defunct processes belonging to 1281670
[2025-06-04 08:51:18] 2025-06-04 12:51:00,267 | INFO     | ready for new job
[2025-06-04 08:51:18] 2025-06-04 12:51:00,267 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:51:18] 2025-06-04 12:51:00,268 | INFO     | **************************************
[2025-06-04 08:51:18] 2025-06-04 12:51:00,268 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:51:18] 2025-06-04 12:51:00,268 | INFO     | **************************************
[2025-06-04 08:51:18] 2025-06-04 12:51:00,268 | INFO     | 
[2025-06-04 08:51:18] 2025-06-04 12:51:00,286 | INFO     | architecture information:
[2025-06-04 08:51:18] 2025-06-04 12:51:00,286 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:51:18] 2025-06-04 12:51:00,299 | INFO     | cat /etc/os-release:
[2025-06-04 08:51:18] NAME="CentOS Linux"
[2025-06-04 08:51:18] VERSION="7 (Core)"
[2025-06-04 08:51:18] ID="centos"
[2025-06-04 08:51:18] ID_LIKE="rhel fedora"
[2025-06-04 08:51:18] VERSION_ID="7"
[2025-06-04 08:51:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:51:18] ANSI_COLOR="0;31"
[2025-06-04 08:51:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:51:18] HOME_URL="https://www.centos.org/"
[2025-06-04 08:51:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:51:18] 
[2025-06-04 08:51:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:51:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:51:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:51:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:51:18] 
[2025-06-04 08:51:18] 2025-06-04 12:51:00,299 | INFO     | **************************************
[2025-06-04 08:51:18] 2025-06-04 12:51:00,803 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 08:51:18] 2025-06-04 12:51:00,822 | INFO     | sufficient remaining disk space (172136333312 B)
[2025-06-04 08:51:18] 2025-06-04 12:51:00,823 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:51:18] 2025-06-04 12:51:00,823 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:51:18] 2025-06-04 12:51:00,823 | INFO     | update_server=False
[2025-06-04 08:51:18] 2025-06-04 12:51:00,823 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:51:18] 2025-06-04 12:51:00,823 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:51:18] 2025-06-04 12:51:00,823 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:51:18] 2025-06-04 12:51:00,824 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:51:18] 2025-06-04 12:51:00,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:51:18] 2025-06-04 12:51:00,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:51:18] 2025-06-04 12:51:00,946 | INFO     | all payload control threads have been joined
[2025-06-04 08:51:18] 2025-06-04 12:51:00,987 | INFO     | all job control threads have been joined
[2025-06-04 08:51:18] 2025-06-04 12:51:01,136 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 08:51:18] 2025-06-04 12:51:01,136 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 08:51:18] 2025-06-04 12:51:01,136 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:51:18] 2025-06-04 12:51:01,136 | INFO     | will abort loop
[2025-06-04 08:51:18] 2025-06-04 12:51:01,784 | INFO     | all data control threads have been joined
[2025-06-04 08:51:18] 2025-06-04 12:51:01,828 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:51:18] 2025-06-04 12:51:01,872 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:51:18] 2025-06-04 12:51:01,946 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:51:18] 2025-06-04 12:51:01,947 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:51:18] 2025-06-04 12:51:01,952 | INFO     | [payload] control thread has finished
[2025-06-04 08:51:18] 2025-06-04 12:51:01,993 | INFO     | [job] control thread has finished
[2025-06-04 08:51:18] 2025-06-04 12:51:02,048 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:51:18] 2025-06-04 12:51:02,142 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:51:18] 2025-06-04 12:51:02,310 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:51:18] 2025-06-04 12:51:02,688 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:51:18] 2025-06-04 12:51:02,789 | INFO     | [data] control thread has finished
[2025-06-04 08:51:18] 2025-06-04 12:51:03,131 | INFO     | [job] validate thread has finished
[2025-06-04 08:51:18] 2025-06-04 12:51:03,341 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:51:18] 2025-06-04 12:51:03,586 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:51:18] 2025-06-04 12:51:03,951 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:51:18] 2025-06-04 12:51:04,591 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:51:18] 2025-06-04 12:51:04,829 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:51:18] 2025-06-04 12:51:11,090 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:51:18] 2025-06-04 12:51:12,095 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:51:18] 2025-06-04 12:51:12,828 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140359776044864)>', '<ExcThread(monitor, started 140358994360064)>']
[2025-06-04 08:51:18] 2025-06-04 12:51:12,889 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:51:18] 2025-06-04 12:51:12,889 | INFO     | [monitor] control thread has ended
[2025-06-04 08:51:18] 2025-06-04 12:51:17,853 | INFO     | all workflow threads have been joined
[2025-06-04 08:51:18] 2025-06-04 12:51:17,853 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:51:18] 2025-06-04 12:51:17,854 | INFO     | traces error code: 0
[2025-06-04 08:51:18] 2025-06-04 12:51:17,854 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:51:18] 2025-06-04 12:51:17,973 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:51:18] 2025-06-04 12:51:17,977 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:51:18] 2025-06-04 12:51:17,980 [wrapper] pilotpid: 1270824
[2025-06-04 08:51:18] 2025-06-04 12:51:17,983 [wrapper] Pilot exit status: 0
[2025-06-04 08:51:18] 2025-06-04 12:51:17,994 [wrapper] pandaids: 6678391601
[2025-06-04 08:51:18] 2025-06-04 12:51:18,121 [wrapper] cleanup supervisor_pilot 3008865 1270825
[2025-06-04 08:51:18] 2025-06-04 12:51:18,125 [wrapper] Test setup, not cleaning
[2025-06-04 08:51:18] 2025-06-04 12:51:18,127 [wrapper] apfmon messages muted
[2025-06-04 08:51:18] 2025-06-04 12:51:18,130 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:51:18] 2025-06-04 12:51:18,132 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:51:18]  *** Error codes and diagnostics ***
[2025-06-04 08:51:18]     "exeErrorCode": 0,
[2025-06-04 08:51:18]     "exeErrorDiag": "",
[2025-06-04 08:51:18]     "pilotErrorCode": 0,
[2025-06-04 08:51:18]     "pilotErrorDiag": "",
[2025-06-04 08:51:18]  *** Listing of results directory ***
[2025-06-04 08:51:18] total 387644
[2025-06-04 08:51:18] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:04 pilot3.tar.gz
[2025-06-04 08:51:18] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:33 queuedata.json
[2025-06-04 08:51:18] -rwx------. 1 boincer umatlas     37140 Jun  4 03:33 runpilot2-wrapper.sh
[2025-06-04 08:51:18] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:51:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:59 run_atlas
[2025-06-04 08:51:18] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:59 job.xml
[2025-06-04 08:51:18] -rw-r--r--. 2 boincer umatlas 213512694 Jun  4 07:59 EVNT.45006593._002199.pool.root.1
[2025-06-04 08:51:18] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:59 start_atlas.sh
[2025-06-04 08:51:18] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:59 shared
[2025-06-04 08:51:18] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 07:59 input.tar.gz
[2025-06-04 08:51:18] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:59 boinc_lockfile
[2025-06-04 08:51:18] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 07:59 pandaJob.out
[2025-06-04 08:51:18] -rw-------. 1 boincer umatlas    986812 Jun  4 08:00 agis_schedconf.cvmfs.json
[2025-06-04 08:51:18] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:00 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:51:18] drwx------. 4 boincer umatlas      4096 Jun  4 08:00 pilot3
[2025-06-04 08:51:18] -rw-r--r--. 1 boincer umatlas      7160 Jun  4 08:45 init_data.xml
[2025-06-04 08:51:18] -rw-------. 1 boincer umatlas 178391414 Jun  4 08:50 HITS.45006595._054963.pool.root.1
[2025-06-04 08:51:18] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:50 boinc_task_state.xml
[2025-06-04 08:51:18] -rw-------. 1 boincer umatlas      1033 Jun  4 08:50 memory_monitor_summary.json
[2025-06-04 08:51:18] -rw-------. 1 boincer umatlas    286915 Jun  4 08:50 log.45006595._054963.job.log.tgz.1
[2025-06-04 08:51:18] -rw-------. 1 boincer umatlas        95 Jun  4 08:50 pilot_heartbeat.json
[2025-06-04 08:51:18] -rw-------. 1 boincer umatlas      7686 Jun  4 08:50 heartbeat.json
[2025-06-04 08:51:18] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:51 boinc_mmap_file
[2025-06-04 08:51:18] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:51 wrapper_checkpoint.txt
[2025-06-04 08:51:18] -rw-------. 1 boincer umatlas      4735 Jun  4 08:51 pilotlog.txt
[2025-06-04 08:51:18] -rw-------. 1 boincer umatlas    317871 Jun  4 08:51 log.45006595._054963.job.log.1
[2025-06-04 08:51:18] -rw-------. 1 boincer umatlas       357 Jun  4 08:51 output.list
[2025-06-04 08:51:18] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:51 runtime_log
[2025-06-04 08:51:18] -rw-------. 1 boincer umatlas    624640 Jun  4 08:51 result.tar.gz
[2025-06-04 08:51:18] -rw-r--r--. 1 boincer umatlas      8649 Jun  4 08:51 runtime_log.err
[2025-06-04 08:51:18] -rw-------. 1 boincer umatlas       649 Jun  4 08:51 9EoLDmMoxg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmivaKDmnOtFAo.diag
[2025-06-04 08:51:18] -rw-r--r--. 1 boincer umatlas     21387 Jun  4 08:51 stderr.txt
[2025-06-04 08:51:18] HITS file was successfully produced:
[2025-06-04 08:51:18] -rw-------. 1 boincer umatlas 178391414 Jun  4 08:50 shared/HITS.pool.root.1
[2025-06-04 08:51:18]  *** Contents of shared directory: ***
[2025-06-04 08:51:18] total 383856
[2025-06-04 08:51:18] -rw-r--r--. 2 boincer umatlas 213512694 Jun  4 07:59 ATLAS.root_0
[2025-06-04 08:51:18] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:59 start_atlas.sh
[2025-06-04 08:51:18] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 07:59 input.tar.gz
[2025-06-04 08:51:18] -rw-------. 1 boincer umatlas 178391414 Jun  4 08:50 HITS.pool.root.1
[2025-06-04 08:51:18] -rw-------. 1 boincer umatlas    624640 Jun  4 08:51 result.tar.gz
08:51:19 (1264186): run_atlas exited; CPU time 18972.166708
08:51:19 (1264186): called boinc_finish(0)

</stderr_txt>
]]>

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