Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:46:53 (1065111): wrapper (7.7.26015): starting
08:46:53 (1065111): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 08:46:54] Arguments: --nthreads 12
[2025-06-04 08:46:54] Threads: 12
[2025-06-04 08:46:54] Checking for CVMFS
[2025-06-04 08:46:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:46:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:46:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:46:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:46:54] 2.12.6.0 3367424 23307 455412 146780 2 144 19950950 32935937 7306 16776704 0 86760989 99.607 89199178 32548 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:46:54] CVMFS is ok
[2025-06-04 08:46:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:46:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:46:54] Further information can be found at the LHC@home message board.
[2025-06-04 08:46:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:46:54] Checking for apptainer binary...
[2025-06-04 08:46:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:46:54] Running /usr/bin/apptainer --version
[2025-06-04 08:46:54] apptainer version 1.4.1-1.el9
[2025-06-04 08:46:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:46:54] c6-2-29-4.aglt2.org
[2025-06-04 08:46:54] apptainer works
[2025-06-04 08:46:54] Set ATHENA_PROC_NUMBER=12
[2025-06-04 08:46:54] Set ATHENA_CORE_NUMBER=12
[2025-06-04 08:46:54] Starting ATLAS job with PandaID=6678391644
[2025-06-04 08:46:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:41:21]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:41:21]  guid=4bc95d2c-45af-40ed-a7ab-3c296ca851aa
[2025-06-04 09:41:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 09:41:21]  is_altstaged=None
[2025-06-04 09:41:21]  is_tar=False
[2025-06-04 09:41:21]  lfn=log.45006595._055006.job.log.tgz.1
[2025-06-04 09:41:21]  mtime=0
[2025-06-04 09:41:21]  protocol_id=None
[2025-06-04 09:41:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:41:21]  replicas=None
[2025-06-04 09:41:21]  scope=mc23_13p6TeV
[2025-06-04 09:41:21]  status=None
[2025-06-04 09:41:21]  status_code=0
[2025-06-04 09:41:21]  storage_token=
[2025-06-04 09:41:21]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678391644/log.45006595._055006.job.log.tgz.1
[2025-06-04 09:41:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4e/ca/log.45006595._055006.job.log.tgz.1
[2025-06-04 09:41:21]  workdir=None
[2025-06-04 09:41:21] ]
[2025-06-04 09:41:21] 2025-06-04 13:40:55,525 | INFO     | transferring file log.45006595._055006.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678391644/log.45006595._055006.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:41:21] 2025-06-04 13:40:55,525 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678391644/log.45006595._055006.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._055006.job
[2025-06-04 09:41:21] 2025-06-04 13:40:55,542 | INFO     | adding to output.list: log.45006595._055006.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4e/ca/log.45006595._055006.job.log.tg
[2025-06-04 09:41:21] 2025-06-04 13:40:55,543 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:41:21] 2025-06-04 13:40:55,543 | INFO     | summary of transferred files:
[2025-06-04 09:41:21] 2025-06-04 13:40:55,543 | INFO     |  -- lfn=log.45006595._055006.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:41:21] 2025-06-04 13:40:55,544 | INFO     | stage-out finished correctly
[2025-06-04 09:41:21] 2025-06-04 13:40:56,974 | INFO     | monitor loop #245: job 0:6678391644 is in state 'finished'
[2025-06-04 09:41:21] 2025-06-04 13:40:56,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:41:21] 2025-06-04 13:40:58,283 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:41:21] 2025-06-04 13:40:58,370 | INFO     | job 6678391644 has state=finished
[2025-06-04 09:41:21] 2025-06-04 13:40:58,370 | INFO     | preparing for final server update for job 6678391644 in state='finished'
[2025-06-04 09:41:21] 2025-06-04 13:40:58,429 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 09:41:21] 2025-06-04 13:40:58,430 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:41:21] 2025-06-04 13:40:58,430 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:41:21] 2025-06-04 13:40:58,430 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:41:21] 2025-06-04 13:40:58,430 | INFO     | job 6678391644 has finished - writing final server update
[2025-06-04 09:41:21] 2025-06-04 13:40:58,430 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:41:21] 2025-06-04 13:40:58,445 | INFO     | executing command: lscpu
[2025-06-04 09:41:21] 2025-06-04 13:40:58,511 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:41:21] 2025-06-04 13:40:59,477 | INFO     | monitor loop #246: job 0:6678391644 is in state 'finished'
[2025-06-04 09:41:21] 2025-06-04 13:40:59,477 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:41:21] 2025-06-04 13:41:01,492 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:41:21] 2025-06-04 13:41:01,492 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678391644/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:41:21] 2025-06-04 13:41:01,493 | INFO     | extracted standard info from prmon json
[2025-06-04 09:41:21] 2025-06-04 13:41:01,494 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:41:21] 2025-06-04 13:41:01,494 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:41:21] 2025-06-04 13:41:01,494 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:41:21] 2025-06-04 13:41:01,494 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:41:21] 2025-06-04 13:41:01,496 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:41:21] 2025-06-04 13:41:01,496 | INFO     | sum of square deviations: 30168007.5
[2025-06-04 09:41:21] 2025-06-04 13:41:01,496 | INFO     | sum of deviations: 1527228360.4999995
[2025-06-04 09:41:21] 2025-06-04 13:41:01,496 | INFO     | mean x: 1749042923.5
[2025-06-04 09:41:21] 2025-06-04 13:41:01,496 | INFO     | mean y: 2484171.4565217393
[2025-06-04 09:41:21] 2025-06-04 13:41:01,496 | INFO     | -- intersect: -88541247346.1464
[2025-06-04 09:41:21] 2025-06-04 13:41:01,496 | INFO     | intersect: -88541247346.1464
[2025-06-04 09:41:21] 2025-06-04 13:41:01,497 | INFO     | chi2: 1.0977570055426678
[2025-06-04 09:41:21] 2025-06-04 13:41:01,497 | INFO     | -- intersect: -88541247346.1464
[2025-06-04 09:41:21] 2025-06-04 13:41:01,497 | INFO     | current memory leak: 50.62 B/s (using 46 data points, chi2=1.10)
[2025-06-04 09:41:21] 2025-06-04 13:41:01,497 | INFO     | ..............................
[2025-06-04 09:41:21] 2025-06-04 13:41:01,497 | INFO     | . Timing measurements:
[2025-06-04 09:41:21] 2025-06-04 13:41:01,497 | INFO     | . get job = 0 s
[2025-06-04 09:41:21] 2025-06-04 13:41:01,497 | INFO     | . initial setup = 2 s
[2025-06-04 09:41:21] 2025-06-04 13:41:01,497 | INFO     | . payload setup = 5 s
[2025-06-04 09:41:21] 2025-06-04 13:41:01,498 | INFO     | . stage-in = 0 s
[2025-06-04 09:41:21] 2025-06-04 13:41:01,498 | INFO     | . payload execution = 3208 s
[2025-06-04 09:41:21] 2025-06-04 13:41:01,498 | INFO     | . stage-out = 0 s
[2025-06-04 09:41:21] 2025-06-04 13:41:01,498 | INFO     | . log creation = 0 s
[2025-06-04 09:41:21] 2025-06-04 13:41:01,498 | INFO     | ..............................
[2025-06-04 09:41:21] 2025-06-04 13:41:01,583 | INFO     | 
[2025-06-04 09:41:21] 2025-06-04 13:41:01,584 | INFO     | job summary report
[2025-06-04 09:41:21] 2025-06-04 13:41:01,584 | INFO     | --------------------------------------------------
[2025-06-04 09:41:21] 2025-06-04 13:41:01,584 | INFO     | PanDA job id: 6678391644
[2025-06-04 09:41:21] 2025-06-04 13:41:01,584 | INFO     | task id: 45006595
[2025-06-04 09:41:21] 2025-06-04 13:41:01,584 | INFO     | errors: (none)
[2025-06-04 09:41:21] 2025-06-04 13:41:01,584 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:41:21] 2025-06-04 13:41:01,584 | INFO     | pilot state: finished 
[2025-06-04 09:41:21] 2025-06-04 13:41:01,584 | INFO     | transexitcode: 0
[2025-06-04 09:41:21] 2025-06-04 13:41:01,584 | INFO     | exeerrorcode: 0
[2025-06-04 09:41:21] 2025-06-04 13:41:01,584 | INFO     | exeerrordiag: 
[2025-06-04 09:41:21] 2025-06-04 13:41:01,584 | INFO     | exitcode: 0
[2025-06-04 09:41:21] 2025-06-04 13:41:01,584 | INFO     | exitmsg: OK
[2025-06-04 09:41:21] 2025-06-04 13:41:01,584 | INFO     | cpuconsumptiontime: 30764 s
[2025-06-04 09:41:21] 2025-06-04 13:41:01,585 | INFO     | nevents: 400
[2025-06-04 09:41:21] 2025-06-04 13:41:01,585 | INFO     | neventsw: 0
[2025-06-04 09:41:21] 2025-06-04 13:41:01,585 | INFO     | pid: 1076100
[2025-06-04 09:41:21] 2025-06-04 13:41:01,585 | INFO     | pgrp: 1076100
[2025-06-04 09:41:21] 2025-06-04 13:41:01,585 | INFO     | corecount: 12
[2025-06-04 09:41:21] 2025-06-04 13:41:01,585 | INFO     | event service: False
[2025-06-04 09:41:21] 2025-06-04 13:41:01,585 | INFO     | sizes: {0: 2397171, 1: 2397370, 4: 2397576, 11: 2397604, 3217: 2423040, 3218: 2431981, 3220: 2432165, 3224: 2432335}
[2025-06-04 09:41:21] 2025-06-04 13:41:01,585 | INFO     | --------------------------------------------------
[2025-06-04 09:41:21] 2025-06-04 13:41:01,585 | INFO     | 
[2025-06-04 09:41:21] 2025-06-04 13:41:01,585 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 09:41:21] 2025-06-04 13:41:01,602 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:41:21] 2025-06-04 13:41:01,602 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:41:21] 2025-06-04 13:41:01,602 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:41:21] 2025-06-04 13:41:01,602 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:41:21] 2025-06-04 13:41:01,603 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:41:21] 2025-06-04 13:41:01,603 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:41:21] 2025-06-04 13:41:01,603 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:41:21] 2025-06-04 13:41:01,603 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:41:21] 2025-06-04 13:41:01,603 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:41:21] 2025-06-04 13:41:01,603 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:41:21] 2025-06-04 13:41:01,603 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:41:21] 2025-06-04 13:41:01,603 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:41:21] 2025-06-04 13:41:01,603 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:41:21] 2025-06-04 13:41:01,603 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:41:21] 2025-06-04 13:41:01,603 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:41:21] 2025-06-04 13:41:01,603 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:41:21] 2025-06-04 13:41:01,603 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:41:21] 2025-06-04 13:41:01,604 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:41:21] 2025-06-04 13:41:01,604 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:41:21] 2025-06-04 13:41:01,604 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:41:21] 2025-06-04 13:41:01,604 | INFO     | job 6678391644 has completed (purged errors)
[2025-06-04 09:41:21] 2025-06-04 13:41:01,605 | INFO     | overall cleanup function is called
[2025-06-04 09:41:21] 2025-06-04 13:41:02,612 | INFO     | --- collectZombieJob: --- 10, [1076100]
[2025-06-04 09:41:21] 2025-06-04 13:41:02,613 | INFO     | zombie collector waiting for pid 1076100
[2025-06-04 09:41:21] 2025-06-04 13:41:02,613 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:41:21] 2025-06-04 13:41:02,613 | INFO     | collected zombie processes
[2025-06-04 09:41:21] 2025-06-04 13:41:02,613 | INFO     | will attempt to kill all subprocesses of pid=1076100
[2025-06-04 09:41:21] 2025-06-04 13:41:02,825 | INFO     | process IDs to be killed: [1076100] (in reverse order)
[2025-06-04 09:41:21] 2025-06-04 13:41:02,900 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:41:21] 2025-06-04 13:41:02,900 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:41:21] 2025-06-04 13:41:02,908 | INFO     | did not find any defunct processes belonging to 1076100
[2025-06-04 09:41:21] 2025-06-04 13:41:02,916 | INFO     | did not find any defunct processes belonging to 1076100
[2025-06-04 09:41:21] 2025-06-04 13:41:02,917 | INFO     | ready for new job
[2025-06-04 09:41:21] 2025-06-04 13:41:02,917 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:41:21] 2025-06-04 13:41:02,918 | INFO     | **************************************
[2025-06-04 09:41:21] 2025-06-04 13:41:02,918 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:41:21] 2025-06-04 13:41:02,918 | INFO     | **************************************
[2025-06-04 09:41:21] 2025-06-04 13:41:02,918 | INFO     | 
[2025-06-04 09:41:21] 2025-06-04 13:41:02,933 | INFO     | architecture information:
[2025-06-04 09:41:21] 2025-06-04 13:41:02,933 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:41:21] 2025-06-04 13:41:02,947 | INFO     | cat /etc/os-release:
[2025-06-04 09:41:21] NAME="CentOS Linux"
[2025-06-04 09:41:21] VERSION="7 (Core)"
[2025-06-04 09:41:21] ID="centos"
[2025-06-04 09:41:21] ID_LIKE="rhel fedora"
[2025-06-04 09:41:21] VERSION_ID="7"
[2025-06-04 09:41:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:41:21] ANSI_COLOR="0;31"
[2025-06-04 09:41:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:41:21] HOME_URL="https://www.centos.org/"
[2025-06-04 09:41:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:41:21] 
[2025-06-04 09:41:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:41:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:41:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:41:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:41:21] 
[2025-06-04 09:41:21] 2025-06-04 13:41:02,948 | INFO     | **************************************
[2025-06-04 09:41:21] 2025-06-04 13:41:03,451 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 09:41:21] 2025-06-04 13:41:03,467 | INFO     | sufficient remaining disk space (76364644352 B)
[2025-06-04 09:41:21] 2025-06-04 13:41:03,468 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:41:21] 2025-06-04 13:41:03,468 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:41:21] 2025-06-04 13:41:03,468 | INFO     | update_server=False
[2025-06-04 09:41:21] 2025-06-04 13:41:03,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:41:21] 2025-06-04 13:41:03,468 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:41:21] 2025-06-04 13:41:03,469 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:41:21] 2025-06-04 13:41:03,469 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:41:21] 2025-06-04 13:41:03,469 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:41:21] 2025-06-04 13:41:03,469 | INFO     | aborting loop
[2025-06-04 09:41:21] 2025-06-04 13:41:03,470 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:41:21] 2025-06-04 13:41:03,470 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:41:21] 2025-06-04 13:41:03,633 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:41:21] 2025-06-04 13:41:03,848 | INFO     | all data control threads have been joined
[2025-06-04 09:41:21] 2025-06-04 13:41:03,994 | INFO     | all job control threads have been joined
[2025-06-04 09:41:21] 2025-06-04 13:41:04,375 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:41:21] 2025-06-04 13:41:04,395 | INFO     | all payload control threads have been joined
[2025-06-04 09:41:21] 2025-06-04 13:41:04,473 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:41:21] 2025-06-04 13:41:04,474 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:41:21] 2025-06-04 13:41:04,475 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:41:21] 2025-06-04 13:41:04,572 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:41:21] 2025-06-04 13:41:04,853 | INFO     | [data] control thread has finished
[2025-06-04 09:41:21] 2025-06-04 13:41:04,861 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:41:21] 2025-06-04 13:41:04,871 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:41:21] 2025-06-04 13:41:04,999 | INFO     | [job] control thread has finished
[2025-06-04 09:41:21] 2025-06-04 13:41:05,023 | INFO     | [job] validate thread has finished
[2025-06-04 09:41:21] 2025-06-04 13:41:05,316 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:41:21] 2025-06-04 13:41:05,400 | INFO     | [payload] control thread has finished
[2025-06-04 09:41:21] 2025-06-04 13:41:05,492 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:41:21] 2025-06-04 13:41:05,567 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:41:21] 2025-06-04 13:41:05,637 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:41:21] 2025-06-04 13:41:08,380 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:41:21] 2025-06-04 13:41:13,767 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:41:21] 2025-06-04 13:41:14,772 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:41:21] 2025-06-04 13:41:15,975 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140185559013184)>', '<ExcThread(monitor, started 140185207547648)>']
[2025-06-04 09:41:21] 2025-06-04 13:41:16,533 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:41:21] 2025-06-04 13:41:16,533 | INFO     | [monitor] control thread has ended
[2025-06-04 09:41:21] 2025-06-04 13:41:21,000 | INFO     | all workflow threads have been joined
[2025-06-04 09:41:21] 2025-06-04 13:41:21,000 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:41:21] 2025-06-04 13:41:21,001 | INFO     | traces error code: 0
[2025-06-04 09:41:21] 2025-06-04 13:41:21,001 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:41:21] 2025-06-04 13:41:21,176 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:41:21] 2025-06-04 13:41:21,179 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:41:21] 2025-06-04 13:41:21,181 [wrapper] pilotpid: 1069416
[2025-06-04 09:41:21] 2025-06-04 13:41:21,183 [wrapper] Pilot exit status: 0
[2025-06-04 09:41:21] 2025-06-04 13:41:21,194 [wrapper] pandaids: 6678391644
[2025-06-04 09:41:21] 2025-06-04 13:41:21,243 [wrapper] cleanup supervisor_pilot 1150655 1069417
[2025-06-04 09:41:21] 2025-06-04 13:41:21,245 [wrapper] Test setup, not cleaning
[2025-06-04 09:41:21] 2025-06-04 13:41:21,248 [wrapper] apfmon messages muted
[2025-06-04 09:41:21] 2025-06-04 13:41:21,250 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:41:21] 2025-06-04 13:41:21,252 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:41:21]  *** Error codes and diagnostics ***
[2025-06-04 09:41:21]     "exeErrorCode": 0,
[2025-06-04 09:41:21]     "exeErrorDiag": "",
[2025-06-04 09:41:21]     "pilotErrorCode": 0,
[2025-06-04 09:41:21]     "pilotErrorDiag": "",
[2025-06-04 09:41:21]  *** Listing of results directory ***
[2025-06-04 09:41:21] total 396528
[2025-06-04 09:41:21] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 09:41:21] -rwx------. 1 boincer umatlas     37140 Jun  4 03:37 runpilot2-wrapper.sh
[2025-06-04 09:41:21] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:37 queuedata.json
[2025-06-04 09:41:21] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:41:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:46 run_atlas
[2025-06-04 09:41:21] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:46 job.xml
[2025-06-04 09:41:21] -rw-r--r--. 2 boincer umatlas 219182111 Jun  4 08:46 EVNT.45006593._002201.pool.root.1
[2025-06-04 09:41:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:46 start_atlas.sh
[2025-06-04 09:41:21] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:46 shared
[2025-06-04 09:41:21] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 08:46 input.tar.gz
[2025-06-04 09:41:21] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:46 boinc_lockfile
[2025-06-04 09:41:21] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 08:46 pandaJob.out
[2025-06-04 09:41:21] -rw-------. 1 boincer umatlas    986811 Jun  4 08:47 agis_schedconf.cvmfs.json
[2025-06-04 09:41:21] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:41:21] drwx------. 4 boincer umatlas      4096 Jun  4 08:47 pilot3
[2025-06-04 09:41:21] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 09:36 init_data.xml
[2025-06-04 09:41:21] -rw-------. 1 boincer umatlas 181678399 Jun  4 09:40 HITS.45006595._055006.pool.root.1
[2025-06-04 09:41:21] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:40 boinc_task_state.xml
[2025-06-04 09:41:21] -rw-------. 1 boincer umatlas      1028 Jun  4 09:40 memory_monitor_summary.json
[2025-06-04 09:41:21] -rw-------. 1 boincer umatlas        95 Jun  4 09:40 pilot_heartbeat.json
[2025-06-04 09:41:21] -rw-------. 1 boincer umatlas    342600 Jun  4 09:40 log.45006595._055006.job.log.tgz.1
[2025-06-04 09:41:21] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:40 boinc_mmap_file
[2025-06-04 09:41:21] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:40 wrapper_checkpoint.txt
[2025-06-04 09:41:21] -rw-------. 1 boincer umatlas      7708 Jun  4 09:41 heartbeat.json
[2025-06-04 09:41:21] -rw-------. 1 boincer umatlas      4548 Jun  4 09:41 pilotlog.txt
[2025-06-04 09:41:21] -rw-------. 1 boincer umatlas    338309 Jun  4 09:41 log.45006595._055006.job.log.1
[2025-06-04 09:41:21] -rw-------. 1 boincer umatlas       357 Jun  4 09:41 output.list
[2025-06-04 09:41:21] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:41 runtime_log
[2025-06-04 09:41:21] -rw-------. 1 boincer umatlas    696320 Jun  4 09:41 result.tar.gz
[2025-06-04 09:41:21] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 09:41 runtime_log.err
[2025-06-04 09:41:21] -rw-------. 1 boincer umatlas       652 Jun  4 09:41 gaMNDmQrxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9enKDmVcl3Jo.diag
[2025-06-04 09:41:21] -rw-r--r--. 1 boincer umatlas     21310 Jun  4 09:41 stderr.txt
[2025-06-04 09:41:21] HITS file was successfully produced:
[2025-06-04 09:41:21] -rw-------. 1 boincer umatlas 181678399 Jun  4 09:40 shared/HITS.pool.root.1
[2025-06-04 09:41:21]  *** Contents of shared directory: ***
[2025-06-04 09:41:21] total 392668
[2025-06-04 09:41:21] -rw-r--r--. 2 boincer umatlas 219182111 Jun  4 08:46 ATLAS.root_0
[2025-06-04 09:41:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:46 start_atlas.sh
[2025-06-04 09:41:21] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 08:46 input.tar.gz
[2025-06-04 09:41:21] -rw-------. 1 boincer umatlas 181678399 Jun  4 09:40 HITS.pool.root.1
[2025-06-04 09:41:21] -rw-------. 1 boincer umatlas    696320 Jun  4 09:41 result.tar.gz
09:41:23 (1065111): run_atlas exited; CPU time 30830.627751
09:41:23 (1065111): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN