Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:56:57 (13789): wrapper (7.7.26015): starting
07:56:57 (13789): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 07:56:57] Arguments: --nthreads 12
[2025-06-04 07:56:57] Threads: 12
[2025-06-04 07:56:57] Checking for CVMFS
[2025-06-04 07:56:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:56:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:56:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:56:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:56:58] 2.11.2.0 2937 35650 88276 146779 3 56 11073216 20275201 1 130560 0 16453366 99.983 6694814 8201 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 07:56:58] CVMFS is ok
[2025-06-04 07:56:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:56:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:56:58] Further information can be found at the LHC@home message board.
[2025-06-04 07:56:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:56:58] Checking for apptainer binary...
[2025-06-04 07:56:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:56:58] Running /usr/bin/apptainer --version
[2025-06-04 07:56:58] apptainer version 1.3.2-1.el7
[2025-06-04 07:56:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:56:59] c-205-8.aglt2.org
[2025-06-04 07:56:59] apptainer works
[2025-06-04 07:56:59] Set ATHENA_PROC_NUMBER=12
[2025-06-04 07:56:59] Set ATHENA_CORE_NUMBER=12
[2025-06-04 07:56:59] Starting ATLAS job with PandaID=6678392074
[2025-06-04 07:56:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:04:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:04:41]  lfn=log.45006595._055103.job.log.tgz.1
[2025-06-04 09:04:41]  mtime=0
[2025-06-04 09:04:41]  protocol_id=None
[2025-06-04 09:04:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:04:41]  replicas=None
[2025-06-04 09:04:41]  scope=mc23_13p6TeV
[2025-06-04 09:04:41]  status=None
[2025-06-04 09:04:41]  status_code=0
[2025-06-04 09:04:41]  storage_token=
[2025-06-04 09:04:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678392074/log.45006595._055103.job.log.tgz.1
[2025-06-04 09:04:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/52/log.45006595._055103.job.log.tgz.1
[2025-06-04 09:04:41]  workdir=None
[2025-06-04 09:04:41] ]
[2025-06-04 09:04:41] 2025-06-04 13:04:15,437 | INFO     | transferring file log.45006595._055103.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678392074/log.45006595._055103.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:04:41] 2025-06-04 13:04:15,437 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678392074/log.45006595._055103.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._055103.job
[2025-06-04 09:04:41] 2025-06-04 13:04:15,459 | INFO     | adding to output.list: log.45006595._055103.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/52/log.45006595._055103.job.log.tg
[2025-06-04 09:04:41] 2025-06-04 13:04:15,460 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:04:41] 2025-06-04 13:04:15,461 | INFO     | summary of transferred files:
[2025-06-04 09:04:41] 2025-06-04 13:04:15,461 | INFO     |  -- lfn=log.45006595._055103.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:04:41] 2025-06-04 13:04:15,461 | INFO     | stage-out finished correctly
[2025-06-04 09:04:41] 2025-06-04 13:04:16,852 | WARNING  | process 24405 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:04:41] 2025-06-04 13:04:16,852 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678392074/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:04:41] 2025-06-04 13:04:16,853 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678392074/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:04:41] 2025-06-04 13:04:16,942 | INFO     | number of running child processes to parent process 24405: 1
[2025-06-04 09:04:41] 2025-06-04 13:04:16,942 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:04:41] 2025-06-04 13:04:17,709 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:04:41] 2025-06-04 13:04:18,072 | INFO     | job 6678392074 has state=finished
[2025-06-04 09:04:41] 2025-06-04 13:04:18,072 | INFO     | preparing for final server update for job 6678392074 in state='finished'
[2025-06-04 09:04:41] 2025-06-04 13:04:18,073 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:04:41] 2025-06-04 13:04:18,073 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:04:41] 2025-06-04 13:04:18,073 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:04:41] 2025-06-04 13:04:18,074 | INFO     | job 6678392074 has finished - writing final server update
[2025-06-04 09:04:41] 2025-06-04 13:04:18,074 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:04:41] 2025-06-04 13:04:18,075 | INFO     | executing command: lscpu
[2025-06-04 09:04:41] 2025-06-04 13:04:18,104 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:04:41] 2025-06-04 13:04:19,445 | INFO     | monitor loop #301: job 0:6678392074 is in state 'finished'
[2025-06-04 09:04:41] 2025-06-04 13:04:19,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:04:41] 2025-06-04 13:04:21,948 | INFO     | monitor loop #302: job 0:6678392074 is in state 'finished'
[2025-06-04 09:04:41] 2025-06-04 13:04:21,948 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:04:41] 2025-06-04 13:04:22,834 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 09:04:41] 2025-06-04 13:04:22,834 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678392074/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:04:41] 2025-06-04 13:04:22,835 | INFO     | extracted standard info from prmon json
[2025-06-04 09:04:41] 2025-06-04 13:04:22,835 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:04:41] 2025-06-04 13:04:22,835 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:04:41] 2025-06-04 13:04:22,836 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:04:41] 2025-06-04 13:04:22,836 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:04:41] 2025-06-04 13:04:22,838 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:04:41] 2025-06-04 13:04:22,839 | INFO     | sum of square deviations: 63666310.0
[2025-06-04 09:04:41] 2025-06-04 13:04:22,839 | INFO     | sum of deviations: -4616823308.0
[2025-06-04 09:04:41] 2025-06-04 13:04:22,839 | INFO     | mean x: 1749040338.0
[2025-06-04 09:04:41] 2025-06-04 13:04:22,839 | INFO     | mean y: 2728638.627118644
[2025-06-04 09:04:41] 2025-06-04 13:04:22,839 | INFO     | -- intersect: 126836060099.34157
[2025-06-04 09:04:41] 2025-06-04 13:04:22,840 | INFO     | intersect: 126836060099.34157
[2025-06-04 09:04:41] 2025-06-04 13:04:22,840 | INFO     | chi2: 0.048815853130784036
[2025-06-04 09:04:41] 2025-06-04 13:04:22,840 | INFO     | -- intersect: 126836060099.34157
[2025-06-04 09:04:41] 2025-06-04 13:04:22,840 | INFO     | current memory leak: -72.52 B/s (using 59 data points, chi2=0.05)
[2025-06-04 09:04:41] 2025-06-04 13:04:22,840 | INFO     | ..............................
[2025-06-04 09:04:41] 2025-06-04 13:04:22,840 | INFO     | . Timing measurements:
[2025-06-04 09:04:41] 2025-06-04 13:04:22,841 | INFO     | . get job = 0 s
[2025-06-04 09:04:41] 2025-06-04 13:04:22,841 | INFO     | . initial setup = 2 s
[2025-06-04 09:04:41] 2025-06-04 13:04:22,841 | INFO     | . payload setup = 9 s
[2025-06-04 09:04:41] 2025-06-04 13:04:22,841 | INFO     | . stage-in = 0 s
[2025-06-04 09:04:41] 2025-06-04 13:04:22,841 | INFO     | . payload execution = 3992 s
[2025-06-04 09:04:41] 2025-06-04 13:04:22,841 | INFO     | . stage-out = 0 s
[2025-06-04 09:04:41] 2025-06-04 13:04:22,841 | INFO     | . log creation = 0 s
[2025-06-04 09:04:41] 2025-06-04 13:04:22,841 | INFO     | ..............................
[2025-06-04 09:04:41] 2025-06-04 13:04:22,924 | INFO     | 
[2025-06-04 09:04:41] 2025-06-04 13:04:22,925 | INFO     | job summary report
[2025-06-04 09:04:41] 2025-06-04 13:04:22,925 | INFO     | --------------------------------------------------
[2025-06-04 09:04:41] 2025-06-04 13:04:22,925 | INFO     | PanDA job id: 6678392074
[2025-06-04 09:04:41] 2025-06-04 13:04:22,925 | INFO     | task id: 45006595
[2025-06-04 09:04:41] 2025-06-04 13:04:22,925 | INFO     | errors: (none)
[2025-06-04 09:04:41] 2025-06-04 13:04:22,925 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:04:41] 2025-06-04 13:04:22,926 | INFO     | pilot state: finished 
[2025-06-04 09:04:41] 2025-06-04 13:04:22,926 | INFO     | transexitcode: 0
[2025-06-04 09:04:41] 2025-06-04 13:04:22,926 | INFO     | exeerrorcode: 0
[2025-06-04 09:04:41] 2025-06-04 13:04:22,926 | INFO     | exeerrordiag: 
[2025-06-04 09:04:41] 2025-06-04 13:04:22,926 | INFO     | exitcode: 0
[2025-06-04 09:04:41] 2025-06-04 13:04:22,926 | INFO     | exitmsg: OK
[2025-06-04 09:04:41] 2025-06-04 13:04:22,927 | INFO     | cpuconsumptiontime: 41380 s
[2025-06-04 09:04:41] 2025-06-04 13:04:22,927 | INFO     | nevents: 400
[2025-06-04 09:04:41] 2025-06-04 13:04:22,927 | INFO     | neventsw: 0
[2025-06-04 09:04:41] 2025-06-04 13:04:22,927 | INFO     | pid: 24405
[2025-06-04 09:04:41] 2025-06-04 13:04:22,927 | INFO     | pgrp: 24405
[2025-06-04 09:04:41] 2025-06-04 13:04:22,927 | INFO     | corecount: 12
[2025-06-04 09:04:41] 2025-06-04 13:04:22,928 | INFO     | event service: False
[2025-06-04 09:04:41] 2025-06-04 13:04:22,928 | INFO     | sizes: {0: 2397169, 1: 2397368, 6: 2397574, 11: 2397602, 4005: 2423281, 4006: 2423280, 4007: 2432405, 4009: 2432461, 4014: 2432631}
[2025-06-04 09:04:41] 2025-06-04 13:04:22,928 | INFO     | --------------------------------------------------
[2025-06-04 09:04:41] 2025-06-04 13:04:22,928 | INFO     | 
[2025-06-04 09:04:41] 2025-06-04 13:04:22,928 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 09:04:41] 2025-06-04 13:04:22,953 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:04:41] 2025-06-04 13:04:22,953 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:04:41] 2025-06-04 13:04:22,953 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:04:41] 2025-06-04 13:04:22,953 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:04:41] 2025-06-04 13:04:22,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:04:41] 2025-06-04 13:04:22,954 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:04:41] 2025-06-04 13:04:22,954 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:04:41] 2025-06-04 13:04:22,954 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:04:41] 2025-06-04 13:04:22,954 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:04:41] 2025-06-04 13:04:22,954 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:04:41] 2025-06-04 13:04:22,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:04:41] 2025-06-04 13:04:22,955 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:04:41] 2025-06-04 13:04:22,955 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:04:41] 2025-06-04 13:04:22,955 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:04:41] 2025-06-04 13:04:22,955 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:04:41] 2025-06-04 13:04:22,955 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:04:41] 2025-06-04 13:04:22,955 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:04:41] 2025-06-04 13:04:22,956 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:04:41] 2025-06-04 13:04:22,956 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:04:41] 2025-06-04 13:04:22,956 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:04:41] 2025-06-04 13:04:22,956 | INFO     | job 6678392074 has completed (purged errors)
[2025-06-04 09:04:41] 2025-06-04 13:04:22,956 | INFO     | overall cleanup function is called
[2025-06-04 09:04:41] 2025-06-04 13:04:23,964 | INFO     | --- collectZombieJob: --- 10, [24405]
[2025-06-04 09:04:41] 2025-06-04 13:04:23,965 | INFO     | zombie collector waiting for pid 24405
[2025-06-04 09:04:41] 2025-06-04 13:04:23,965 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:04:41] 2025-06-04 13:04:23,965 | INFO     | collected zombie processes
[2025-06-04 09:04:41] 2025-06-04 13:04:23,965 | INFO     | will attempt to kill all subprocesses of pid=24405
[2025-06-04 09:04:41] 2025-06-04 13:04:24,058 | INFO     | process IDs to be killed: [24405] (in reverse order)
[2025-06-04 09:04:41] 2025-06-04 13:04:24,110 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:04:41] 2025-06-04 13:04:24,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:04:41] 2025-06-04 13:04:24,113 | INFO     | did not find any defunct processes belonging to 24405
[2025-06-04 09:04:41] 2025-06-04 13:04:24,117 | INFO     | did not find any defunct processes belonging to 24405
[2025-06-04 09:04:41] 2025-06-04 13:04:24,117 | INFO     | ready for new job
[2025-06-04 09:04:41] 2025-06-04 13:04:24,117 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:04:41] 2025-06-04 13:04:24,118 | INFO     | **************************************
[2025-06-04 09:04:41] 2025-06-04 13:04:24,119 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:04:41] 2025-06-04 13:04:24,119 | INFO     | **************************************
[2025-06-04 09:04:41] 2025-06-04 13:04:24,119 | INFO     | 
[2025-06-04 09:04:41] 2025-06-04 13:04:24,119 | INFO     | architecture information:
[2025-06-04 09:04:41] 2025-06-04 13:04:24,120 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:04:41] 2025-06-04 13:04:24,134 | INFO     | cat /etc/os-release:
[2025-06-04 09:04:41] NAME="CentOS Linux"
[2025-06-04 09:04:41] VERSION="7 (Core)"
[2025-06-04 09:04:41] ID="centos"
[2025-06-04 09:04:41] ID_LIKE="rhel fedora"
[2025-06-04 09:04:41] VERSION_ID="7"
[2025-06-04 09:04:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:04:41] ANSI_COLOR="0;31"
[2025-06-04 09:04:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:04:41] HOME_URL="https://www.centos.org/"
[2025-06-04 09:04:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:04:41] 
[2025-06-04 09:04:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:04:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:04:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:04:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:04:41] 
[2025-06-04 09:04:41] 2025-06-04 13:04:24,135 | INFO     | **************************************
[2025-06-04 09:04:41] 2025-06-04 13:04:24,638 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 09:04:41] 2025-06-04 13:04:24,655 | INFO     | sufficient remaining disk space (29417799680 B)
[2025-06-04 09:04:41] 2025-06-04 13:04:24,656 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:04:41] 2025-06-04 13:04:24,656 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:04:41] 2025-06-04 13:04:24,656 | INFO     | update_server=False
[2025-06-04 09:04:41] 2025-06-04 13:04:24,656 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:04:41] 2025-06-04 13:04:24,656 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:04:41] 2025-06-04 13:04:24,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:04:41] 2025-06-04 13:04:24,657 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:04:41] 2025-06-04 13:04:24,658 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:04:41] 2025-06-04 13:04:24,658 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:04:41] 2025-06-04 13:04:24,658 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:04:41] 2025-06-04 13:04:24,718 | INFO     | all data control threads have been joined
[2025-06-04 09:04:41] 2025-06-04 13:04:24,959 | INFO     | all job control threads have been joined
[2025-06-04 09:04:41] 2025-06-04 13:04:25,235 | INFO     | all payload control threads have been joined
[2025-06-04 09:04:41] 2025-06-04 13:04:25,457 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:04:41] 2025-06-04 13:04:25,457 | INFO     | aborting loop
[2025-06-04 09:04:41] 2025-06-04 13:04:25,658 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:04:41] 2025-06-04 13:04:25,659 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:04:41] 2025-06-04 13:04:25,680 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:04:41] 2025-06-04 13:04:25,723 | INFO     | [data] control thread has finished
[2025-06-04 09:04:41] 2025-06-04 13:04:25,867 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:04:41] 2025-06-04 13:04:25,965 | INFO     | [job] control thread has finished
[2025-06-04 09:04:41] 2025-06-04 13:04:26,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:04:41] 2025-06-04 13:04:26,169 | INFO     | [job] validate thread has finished
[2025-06-04 09:04:41] 2025-06-04 13:04:26,239 | INFO     | [payload] control thread has finished
[2025-06-04 09:04:41] 2025-06-04 13:04:26,345 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:04:41] 2025-06-04 13:04:26,350 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:04:41] 2025-06-04 13:04:26,462 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:04:41] 2025-06-04 13:04:26,498 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:04:41] 2025-06-04 13:04:26,933 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:04:41] 2025-06-04 13:04:28,061 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:04:41] 2025-06-04 13:04:28,663 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:04:41] 2025-06-04 13:04:34,805 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:04:41] 2025-06-04 13:04:35,811 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:04:41] 2025-06-04 13:04:36,572 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140483040659264)>', '<ExcThread(monitor, started 140482424313600)>']
[2025-06-04 09:04:41] 2025-06-04 13:04:36,719 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:04:41] 2025-06-04 13:04:36,720 | INFO     | [monitor] control thread has ended
[2025-06-04 09:04:41] 2025-06-04 13:04:41,591 | INFO     | all workflow threads have been joined
[2025-06-04 09:04:41] 2025-06-04 13:04:41,591 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:04:41] 2025-06-04 13:04:41,598 | INFO     | traces error code: 0
[2025-06-04 09:04:41] 2025-06-04 13:04:41,599 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:04:41] 2025-06-04 13:04:41,690 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:04:41] 2025-06-04 13:04:41,695 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:04:41] 2025-06-04 13:04:41,698 [wrapper] pilotpid: 17422
[2025-06-04 09:04:41] 2025-06-04 13:04:41,702 [wrapper] Pilot exit status: 0
[2025-06-04 09:04:41] 2025-06-04 13:04:41,718 [wrapper] pandaids: 6678392074
[2025-06-04 09:04:41] 2025-06-04 13:04:41,755 [wrapper] cleanup supervisor_pilot  5622 17423
[2025-06-04 09:04:41] 2025-06-04 13:04:41,759 [wrapper] Test setup, not cleaning
[2025-06-04 09:04:41] 2025-06-04 13:04:41,762 [wrapper] apfmon messages muted
[2025-06-04 09:04:41] 2025-06-04 13:04:41,766 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:04:41] 2025-06-04 13:04:41,770 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:04:41]  *** Error codes and diagnostics ***
[2025-06-04 09:04:41]     "exeErrorCode": 0,
[2025-06-04 09:04:41]     "exeErrorDiag": "",
[2025-06-04 09:04:41]     "pilotErrorCode": 0,
[2025-06-04 09:04:41]     "pilotErrorDiag": "",
[2025-06-04 09:04:41]  *** Listing of results directory ***
[2025-06-04 09:04:41] total 391260
[2025-06-04 09:04:41] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 09:04:41] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:38 queuedata.json
[2025-06-04 09:04:41] -rwx------ 1 boincer umatlas     37140 Jun  4 03:38 runpilot2-wrapper.sh
[2025-06-04 09:04:41] -rw-r--r-- 1 boincer umatlas       100 Jun  4 07:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:04:41] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 07:56 run_atlas
[2025-06-04 09:04:41] -rw-r--r-- 1 boincer umatlas       105 Jun  4 07:56 job.xml
[2025-06-04 09:04:41] -rw-r--r-- 2 boincer umatlas 216997264 Jun  4 07:56 EVNT.45006593._002205.pool.root.1
[2025-06-04 09:04:41] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:56 start_atlas.sh
[2025-06-04 09:04:41] drwxrwx--x 2 boincer umatlas      4096 Jun  4 07:56 shared
[2025-06-04 09:04:41] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 07:56 input.tar.gz
[2025-06-04 09:04:41] -rw-r--r-- 1 boincer umatlas         0 Jun  4 07:56 boinc_lockfile
[2025-06-04 09:04:41] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 07:56 pandaJob.out
[2025-06-04 09:04:41] -rw------- 1 boincer umatlas    986812 Jun  4 07:57 agis_schedconf.cvmfs.json
[2025-06-04 09:04:41] -rw------- 1 boincer umatlas   1598969 Jun  4 07:57 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:04:41] drwx------ 4 boincer umatlas      4096 Jun  4 07:57 pilot3
[2025-06-04 09:04:41] -rw-r--r-- 1 boincer umatlas      5866 Jun  4 09:00 init_data.xml
[2025-06-04 09:04:41] -rw------- 1 boincer umatlas 178346318 Jun  4 09:03 HITS.45006595._055103.pool.root.1
[2025-06-04 09:04:41] -rw-r--r-- 1 boincer umatlas       529 Jun  4 09:03 boinc_task_state.xml
[2025-06-04 09:04:41] -rw------- 1 boincer umatlas        95 Jun  4 09:04 pilot_heartbeat.json
[2025-06-04 09:04:41] -rw------- 1 boincer umatlas      1047 Jun  4 09:04 memory_monitor_summary.json
[2025-06-04 09:04:41] -rw------- 1 boincer umatlas    346021 Jun  4 09:04 log.45006595._055103.job.log.tgz.1
[2025-06-04 09:04:41] -rw------- 1 boincer umatlas      7749 Jun  4 09:04 heartbeat.json
[2025-06-04 09:04:41] -rw-r--r-- 1 boincer umatlas        27 Jun  4 09:04 wrapper_checkpoint.txt
[2025-06-04 09:04:41] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 09:04 boinc_mmap_file
[2025-06-04 09:04:41] -rw------- 1 boincer umatlas      4548 Jun  4 09:04 pilotlog.txt
[2025-06-04 09:04:41] -rw------- 1 boincer umatlas    391611 Jun  4 09:04 log.45006595._055103.job.log.1
[2025-06-04 09:04:41] -rw------- 1 boincer umatlas       357 Jun  4 09:04 output.list
[2025-06-04 09:04:41] -rw-r--r-- 1 boincer umatlas       620 Jun  4 09:04 runtime_log
[2025-06-04 09:04:41] -rw------- 1 boincer umatlas    757760 Jun  4 09:04 result.tar.gz
[2025-06-04 09:04:41] -rw------- 1 boincer umatlas       658 Jun  4 09:04 TgyNDmFtxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpfnKDm76Wm6m.diag
[2025-06-04 09:04:41] -rw-r--r-- 1 boincer umatlas      8656 Jun  4 09:04 runtime_log.err
[2025-06-04 09:04:41] -rw-r--r-- 1 boincer umatlas     21624 Jun  4 09:04 stderr.txt
[2025-06-04 09:04:41] HITS file was successfully produced:
[2025-06-04 09:04:41] -rw------- 1 boincer umatlas 178346318 Jun  4 09:03 shared/HITS.pool.root.1
[2025-06-04 09:04:41]  *** Contents of shared directory: ***
[2025-06-04 09:04:41] total 387344
[2025-06-04 09:04:41] -rw-r--r-- 2 boincer umatlas 216997264 Jun  4 07:56 ATLAS.root_0
[2025-06-04 09:04:41] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:56 start_atlas.sh
[2025-06-04 09:04:41] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 07:56 input.tar.gz
[2025-06-04 09:04:41] -rw------- 1 boincer umatlas 178346318 Jun  4 09:03 HITS.pool.root.1
[2025-06-04 09:04:41] -rw------- 1 boincer umatlas    757760 Jun  4 09:04 result.tar.gz
09:04:43 (13789): run_atlas exited; CPU time 41360.210697
09:04:43 (13789): called boinc_finish(0)

</stderr_txt>
]]>

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