Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:49:47 (600355): wrapper (7.7.26015): starting
07:49:47 (600355): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:49:47] Arguments: --nthreads 8
[2025-06-04 07:49:47] Threads: 8
[2025-06-04 07:49:47] Checking for CVMFS
[2025-06-04 07:49:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:49:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:49:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:49:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:49:47] 2.12.6.0 54733 37138 527700 146779 3 443 31533235 32935936 31755 16776704 1 495125166 99.711 351438297 21621 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:49:47] CVMFS is ok
[2025-06-04 07:49:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:49:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:49:47] Further information can be found at the LHC@home message board.
[2025-06-04 07:49:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:49:47] Checking for apptainer binary...
[2025-06-04 07:49:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:49:47] Running /usr/bin/apptainer --version
[2025-06-04 07:49:47] apptainer version 1.4.1-1.el9
[2025-06-04 07:49:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:49:47] c7-2-10.aglt2.org
[2025-06-04 07:49:47] apptainer works
[2025-06-04 07:49:47] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:49:47] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:49:47] Starting ATLAS job with PandaID=6678391527
[2025-06-04 07:49:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:56:39]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:56:39]  is_tar=False
[2025-06-04 08:56:39]  lfn=log.45006595._054889.job.log.tgz.1
[2025-06-04 08:56:39]  mtime=0
[2025-06-04 08:56:39]  protocol_id=None
[2025-06-04 08:56:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:56:39]  replicas=None
[2025-06-04 08:56:39]  scope=mc23_13p6TeV
[2025-06-04 08:56:39]  status=None
[2025-06-04 08:56:39]  status_code=0
[2025-06-04 08:56:39]  storage_token=
[2025-06-04 08:56:39]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678391527/log.45006595._054889.job.log.tgz.1
[2025-06-04 08:56:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/df/log.45006595._054889.job.log.tgz.1
[2025-06-04 08:56:39]  workdir=None
[2025-06-04 08:56:39] ]
[2025-06-04 08:56:39] 2025-06-04 12:56:09,501 | INFO     | transferring file log.45006595._054889.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678391527/log.45006595._054889.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:56:39] 2025-06-04 12:56:09,501 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678391527/log.45006595._054889.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._054889.job
[2025-06-04 08:56:39] 2025-06-04 12:56:09,523 | INFO     | adding to output.list: log.45006595._054889.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/df/log.45006595._054889.job.log.tg
[2025-06-04 08:56:39] 2025-06-04 12:56:09,523 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:56:39] 2025-06-04 12:56:09,523 | INFO     | summary of transferred files:
[2025-06-04 08:56:39] 2025-06-04 12:56:09,524 | INFO     |  -- lfn=log.45006595._054889.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:56:39] 2025-06-04 12:56:09,524 | INFO     | stage-out finished correctly
[2025-06-04 08:56:39] 2025-06-04 12:56:09,761 | INFO     | monitor loop #285: job 0:6678391527 is in state 'finished'
[2025-06-04 08:56:39] 2025-06-04 12:56:09,762 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:56:39] 2025-06-04 12:56:11,988 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:56:39] 2025-06-04 12:56:12,266 | INFO     | monitor loop #286: job 0:6678391527 is in state 'finished'
[2025-06-04 08:56:39] 2025-06-04 12:56:12,266 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:56:39] 2025-06-04 12:56:14,489 | INFO     | job 6678391527 has state=finished
[2025-06-04 08:56:39] 2025-06-04 12:56:14,490 | INFO     | preparing for final server update for job 6678391527 in state='finished'
[2025-06-04 08:56:39] 2025-06-04 12:56:14,490 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:56:39] 2025-06-04 12:56:14,491 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:56:39] 2025-06-04 12:56:14,491 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:56:39] 2025-06-04 12:56:14,491 | INFO     | job 6678391527 has finished - writing final server update
[2025-06-04 08:56:39] 2025-06-04 12:56:14,491 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:56:39] 2025-06-04 12:56:14,509 | INFO     | executing command: lscpu
[2025-06-04 08:56:39] 2025-06-04 12:56:14,605 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:56:39] 2025-06-04 12:56:14,770 | INFO     | monitor loop #287: job 0:6678391527 is in state 'finished'
[2025-06-04 08:56:39] 2025-06-04 12:56:14,771 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:56:39] 2025-06-04 12:56:17,275 | INFO     | monitor loop #288: job 0:6678391527 is in state 'finished'
[2025-06-04 08:56:39] 2025-06-04 12:56:17,275 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:56:39] 2025-06-04 12:56:19,154 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:56:39] 2025-06-04 12:56:19,154 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678391527/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:56:39] 2025-06-04 12:56:19,155 | INFO     | extracted standard info from prmon json
[2025-06-04 08:56:39] 2025-06-04 12:56:19,155 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:56:39] 2025-06-04 12:56:19,155 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:56:39] 2025-06-04 12:56:19,155 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:56:39] 2025-06-04 12:56:19,155 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:56:39] 2025-06-04 12:56:19,157 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:56:39] 2025-06-04 12:56:19,157 | INFO     | sum of square deviations: 60482994.5
[2025-06-04 08:56:39] 2025-06-04 12:56:19,157 | INFO     | sum of deviations: 5190258139.000001
[2025-06-04 08:56:39] 2025-06-04 12:56:19,157 | INFO     | mean x: 1749039870.5
[2025-06-04 08:56:39] 2025-06-04 12:56:19,157 | INFO     | mean y: 2142056.8620689656
[2025-06-04 08:56:39] 2025-06-04 12:56:19,157 | INFO     | -- intersect: -150089110837.34
[2025-06-04 08:56:39] 2025-06-04 12:56:19,157 | INFO     | intersect: -150089110837.34
[2025-06-04 08:56:39] 2025-06-04 12:56:19,157 | INFO     | chi2: 0.8036945518171283
[2025-06-04 08:56:39] 2025-06-04 12:56:19,158 | INFO     | -- intersect: -150089110837.34
[2025-06-04 08:56:39] 2025-06-04 12:56:19,158 | INFO     | current memory leak: 85.81 B/s (using 58 data points, chi2=0.80)
[2025-06-04 08:56:39] 2025-06-04 12:56:19,158 | INFO     | ..............................
[2025-06-04 08:56:39] 2025-06-04 12:56:19,158 | INFO     | . Timing measurements:
[2025-06-04 08:56:39] 2025-06-04 12:56:19,158 | INFO     | . get job = 0 s
[2025-06-04 08:56:39] 2025-06-04 12:56:19,158 | INFO     | . initial setup = 3 s
[2025-06-04 08:56:39] 2025-06-04 12:56:19,158 | INFO     | . payload setup = 7 s
[2025-06-04 08:56:39] 2025-06-04 12:56:19,158 | INFO     | . stage-in = 0 s
[2025-06-04 08:56:39] 2025-06-04 12:56:19,158 | INFO     | . payload execution = 3943 s
[2025-06-04 08:56:39] 2025-06-04 12:56:19,158 | INFO     | . stage-out = 0 s
[2025-06-04 08:56:39] 2025-06-04 12:56:19,158 | INFO     | . log creation = 0 s
[2025-06-04 08:56:39] 2025-06-04 12:56:19,158 | INFO     | ..............................
[2025-06-04 08:56:39] 2025-06-04 12:56:19,224 | INFO     | 
[2025-06-04 08:56:39] 2025-06-04 12:56:19,224 | INFO     | job summary report
[2025-06-04 08:56:39] 2025-06-04 12:56:19,224 | INFO     | --------------------------------------------------
[2025-06-04 08:56:39] 2025-06-04 12:56:19,224 | INFO     | PanDA job id: 6678391527
[2025-06-04 08:56:39] 2025-06-04 12:56:19,224 | INFO     | task id: 45006595
[2025-06-04 08:56:39] 2025-06-04 12:56:19,224 | INFO     | errors: (none)
[2025-06-04 08:56:39] 2025-06-04 12:56:19,224 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:56:39] 2025-06-04 12:56:19,224 | INFO     | pilot state: finished 
[2025-06-04 08:56:39] 2025-06-04 12:56:19,224 | INFO     | transexitcode: 0
[2025-06-04 08:56:39] 2025-06-04 12:56:19,224 | INFO     | exeerrorcode: 0
[2025-06-04 08:56:39] 2025-06-04 12:56:19,224 | INFO     | exeerrordiag: 
[2025-06-04 08:56:39] 2025-06-04 12:56:19,225 | INFO     | exitcode: 0
[2025-06-04 08:56:39] 2025-06-04 12:56:19,225 | INFO     | exitmsg: OK
[2025-06-04 08:56:39] 2025-06-04 12:56:19,225 | INFO     | cpuconsumptiontime: 24872 s
[2025-06-04 08:56:39] 2025-06-04 12:56:19,225 | INFO     | nevents: 400
[2025-06-04 08:56:39] 2025-06-04 12:56:19,225 | INFO     | neventsw: 0
[2025-06-04 08:56:39] 2025-06-04 12:56:19,225 | INFO     | pid: 623674
[2025-06-04 08:56:39] 2025-06-04 12:56:19,225 | INFO     | pgrp: 623674
[2025-06-04 08:56:39] 2025-06-04 12:56:19,225 | INFO     | corecount: 8
[2025-06-04 08:56:39] 2025-06-04 12:56:19,225 | INFO     | event service: False
[2025-06-04 08:56:39] 2025-06-04 12:56:19,225 | INFO     | sizes: {0: 2397342, 1: 2397342, 5: 2397576, 11: 2397632, 3954: 2423377, 3955: 2432318, 3957: 2432502, 3964: 2432672}
[2025-06-04 08:56:39] 2025-06-04 12:56:19,225 | INFO     | --------------------------------------------------
[2025-06-04 08:56:39] 2025-06-04 12:56:19,225 | INFO     | 
[2025-06-04 08:56:39] 2025-06-04 12:56:19,225 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 08:56:39] 2025-06-04 12:56:19,251 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:56:39] 2025-06-04 12:56:19,251 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:56:39] 2025-06-04 12:56:19,251 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:56:39] 2025-06-04 12:56:19,251 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:56:39] 2025-06-04 12:56:19,251 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:56:39] 2025-06-04 12:56:19,251 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:56:39] 2025-06-04 12:56:19,251 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:56:39] 2025-06-04 12:56:19,251 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:56:39] 2025-06-04 12:56:19,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:56:39] 2025-06-04 12:56:19,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:56:39] 2025-06-04 12:56:19,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:56:39] 2025-06-04 12:56:19,252 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:56:39] 2025-06-04 12:56:19,252 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:56:39] 2025-06-04 12:56:19,252 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:56:39] 2025-06-04 12:56:19,252 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:56:39] 2025-06-04 12:56:19,252 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:56:39] 2025-06-04 12:56:19,252 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:56:39] 2025-06-04 12:56:19,252 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:56:39] 2025-06-04 12:56:19,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:56:39] 2025-06-04 12:56:19,252 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:56:39] 2025-06-04 12:56:19,252 | INFO     | job 6678391527 has completed (purged errors)
[2025-06-04 08:56:39] 2025-06-04 12:56:19,252 | INFO     | overall cleanup function is called
[2025-06-04 08:56:39] 2025-06-04 12:56:20,260 | INFO     | --- collectZombieJob: --- 10, [623674]
[2025-06-04 08:56:39] 2025-06-04 12:56:20,260 | INFO     | zombie collector waiting for pid 623674
[2025-06-04 08:56:39] 2025-06-04 12:56:20,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:56:39] 2025-06-04 12:56:20,261 | INFO     | collected zombie processes
[2025-06-04 08:56:39] 2025-06-04 12:56:20,261 | INFO     | will attempt to kill all subprocesses of pid=623674
[2025-06-04 08:56:39] 2025-06-04 12:56:20,812 | INFO     | process IDs to be killed: [623674] (in reverse order)
[2025-06-04 08:56:39] 2025-06-04 12:56:20,995 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:56:39] 2025-06-04 12:56:20,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:56:39] 2025-06-04 12:56:21,020 | INFO     | did not find any defunct processes belonging to 623674
[2025-06-04 08:56:39] 2025-06-04 12:56:21,045 | INFO     | did not find any defunct processes belonging to 623674
[2025-06-04 08:56:39] 2025-06-04 12:56:21,045 | INFO     | ready for new job
[2025-06-04 08:56:39] 2025-06-04 12:56:21,045 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:56:39] 2025-06-04 12:56:21,047 | INFO     | **************************************
[2025-06-04 08:56:39] 2025-06-04 12:56:21,047 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:56:39] 2025-06-04 12:56:21,047 | INFO     | **************************************
[2025-06-04 08:56:39] 2025-06-04 12:56:21,047 | INFO     | 
[2025-06-04 08:56:39] 2025-06-04 12:56:21,064 | INFO     | architecture information:
[2025-06-04 08:56:39] 2025-06-04 12:56:21,065 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:56:39] 2025-06-04 12:56:21,083 | INFO     | cat /etc/os-release:
[2025-06-04 08:56:39] NAME="CentOS Linux"
[2025-06-04 08:56:39] VERSION="7 (Core)"
[2025-06-04 08:56:39] ID="centos"
[2025-06-04 08:56:39] ID_LIKE="rhel fedora"
[2025-06-04 08:56:39] VERSION_ID="7"
[2025-06-04 08:56:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:56:39] ANSI_COLOR="0;31"
[2025-06-04 08:56:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:56:39] HOME_URL="https://www.centos.org/"
[2025-06-04 08:56:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:56:39] 
[2025-06-04 08:56:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:56:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:56:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:56:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:56:39] 
[2025-06-04 08:56:39] 2025-06-04 12:56:21,084 | INFO     | **************************************
[2025-06-04 08:56:39] 2025-06-04 12:56:21,136 | INFO     | 3985s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 08:56:39] 2025-06-04 12:56:21,587 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 08:56:39] 2025-06-04 12:56:21,608 | INFO     | sufficient remaining disk space (75721867264 B)
[2025-06-04 08:56:39] 2025-06-04 12:56:21,608 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:56:39] 2025-06-04 12:56:21,608 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:56:39] 2025-06-04 12:56:21,608 | INFO     | update_server=False
[2025-06-04 08:56:39] 2025-06-04 12:56:21,608 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:56:39] 2025-06-04 12:56:21,609 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:56:39] 2025-06-04 12:56:21,609 | INFO     | aborting loop
[2025-06-04 08:56:39] 2025-06-04 12:56:21,622 | INFO     | all payload control threads have been joined
[2025-06-04 08:56:39] 2025-06-04 12:56:22,142 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:56:39] 2025-06-04 12:56:22,143 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:56:39] 2025-06-04 12:56:22,143 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:56:39] 2025-06-04 12:56:22,431 | INFO     | all data control threads have been joined
[2025-06-04 08:56:39] 2025-06-04 12:56:22,577 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:56:39] 2025-06-04 12:56:22,614 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:56:39] 2025-06-04 12:56:22,615 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:56:39] 2025-06-04 12:56:22,619 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:56:39] 2025-06-04 12:56:22,627 | INFO     | [payload] control thread has finished
[2025-06-04 08:56:39] 2025-06-04 12:56:22,662 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:56:39] 2025-06-04 12:56:22,690 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:56:39] 2025-06-04 12:56:22,941 | INFO     | all job control threads have been joined
[2025-06-04 08:56:39] 2025-06-04 12:56:23,067 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:56:39] 2025-06-04 12:56:23,126 | INFO     | [job] validate thread has finished
[2025-06-04 08:56:39] 2025-06-04 12:56:23,130 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:56:39] 2025-06-04 12:56:23,269 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:56:39] 2025-06-04 12:56:23,308 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:56:39] 2025-06-04 12:56:23,436 | INFO     | [data] control thread has finished
[2025-06-04 08:56:39] 2025-06-04 12:56:23,946 | INFO     | [job] control thread has finished
[2025-06-04 08:56:39] 2025-06-04 12:56:24,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:56:39] 2025-06-04 12:56:24,625 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:56:39] 2025-06-04 12:56:25,241 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:56:39] 2025-06-04 12:56:26,586 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:56:39] 2025-06-04 12:56:32,560 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:56:39] 2025-06-04 12:56:33,570 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:56:39] 2025-06-04 12:56:34,146 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139943924852544)>', '<ExcThread(monitor, started 139942986512128)>']
[2025-06-04 08:56:39] 2025-06-04 12:56:34,209 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:56:39] 2025-06-04 12:56:34,209 | INFO     | [monitor] control thread has ended
[2025-06-04 08:56:39] 2025-06-04 12:56:39,172 | INFO     | all workflow threads have been joined
[2025-06-04 08:56:39] 2025-06-04 12:56:39,172 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:56:39] 2025-06-04 12:56:39,173 | INFO     | traces error code: 0
[2025-06-04 08:56:39] 2025-06-04 12:56:39,173 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:56:39] 2025-06-04 12:56:39,311 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:56:39] 2025-06-04 12:56:39,316 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:56:39] 2025-06-04 12:56:39,319 [wrapper] pilotpid: 607837
[2025-06-04 08:56:39] 2025-06-04 12:56:39,322 [wrapper] Pilot exit status: 0
[2025-06-04 08:56:39] 2025-06-04 12:56:39,336 [wrapper] pandaids: 6678391527
[2025-06-04 08:56:39] 2025-06-04 12:56:39,480 [wrapper] cleanup supervisor_pilot 1460590 607838
[2025-06-04 08:56:39] 2025-06-04 12:56:39,483 [wrapper] Test setup, not cleaning
[2025-06-04 08:56:39] 2025-06-04 12:56:39,486 [wrapper] apfmon messages muted
[2025-06-04 08:56:39] 2025-06-04 12:56:39,490 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:56:39] 2025-06-04 12:56:39,493 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:56:39]  *** Error codes and diagnostics ***
[2025-06-04 08:56:39]     "exeErrorCode": 0,
[2025-06-04 08:56:39]     "exeErrorDiag": "",
[2025-06-04 08:56:39]     "pilotErrorCode": 0,
[2025-06-04 08:56:39]     "pilotErrorDiag": "",
[2025-06-04 08:56:39]  *** Listing of results directory ***
[2025-06-04 08:56:39] total 384392
[2025-06-04 08:56:39] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:04 pilot3.tar.gz
[2025-06-04 08:56:39] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:29 queuedata.json
[2025-06-04 08:56:39] -rwx------. 1 boincer umatlas     37140 Jun  4 03:29 runpilot2-wrapper.sh
[2025-06-04 08:56:39] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:56:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:49 run_atlas
[2025-06-04 08:56:39] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:49 job.xml
[2025-06-04 08:56:39] -rw-r--r--. 2 boincer umatlas 215212369 Jun  4 07:49 EVNT.45006593._002196.pool.root.1
[2025-06-04 08:56:39] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:49 start_atlas.sh
[2025-06-04 08:56:39] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:49 shared
[2025-06-04 08:56:39] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 07:49 input.tar.gz
[2025-06-04 08:56:39] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:49 boinc_lockfile
[2025-06-04 08:56:39] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 07:49 pandaJob.out
[2025-06-04 08:56:39] -rw-------. 1 boincer umatlas    986812 Jun  4 07:49 agis_schedconf.cvmfs.json
[2025-06-04 08:56:39] -rw-------. 1 boincer umatlas   1598969 Jun  4 07:49 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:56:39] drwx------. 4 boincer umatlas      4096 Jun  4 07:49 pilot3
[2025-06-04 08:56:39] -rw-r--r--. 1 boincer umatlas      6932 Jun  4 08:54 init_data.xml
[2025-06-04 08:56:39] -rw-------. 1 boincer umatlas 173171058 Jun  4 08:55 HITS.45006595._054889.pool.root.1
[2025-06-04 08:56:39] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:55 boinc_task_state.xml
[2025-06-04 08:56:39] -rw-------. 1 boincer umatlas        95 Jun  4 08:55 pilot_heartbeat.json
[2025-06-04 08:56:39] -rw-------. 1 boincer umatlas      1036 Jun  4 08:56 memory_monitor_summary.json
[2025-06-04 08:56:39] -rw-------. 1 boincer umatlas    302781 Jun  4 08:56 log.45006595._054889.job.log.tgz.1
[2025-06-04 08:56:39] -rw-------. 1 boincer umatlas      7688 Jun  4 08:56 heartbeat.json
[2025-06-04 08:56:39] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:56 boinc_mmap_file
[2025-06-04 08:56:39] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:56 wrapper_checkpoint.txt
[2025-06-04 08:56:39] -rw-------. 1 boincer umatlas      4540 Jun  4 08:56 pilotlog.txt
[2025-06-04 08:56:39] -rw-------. 1 boincer umatlas    398036 Jun  4 08:56 log.45006595._054889.job.log.1
[2025-06-04 08:56:39] -rw-------. 1 boincer umatlas       357 Jun  4 08:56 output.list
[2025-06-04 08:56:39] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:56 runtime_log
[2025-06-04 08:56:39] -rw-------. 1 boincer umatlas    716800 Jun  4 08:56 result.tar.gz
[2025-06-04 08:56:39] -rw-------. 1 boincer umatlas       651 Jun  4 08:56 zsgKDmSkxg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbuaKDmlunlvn.diag
[2025-06-04 08:56:39] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 08:56 runtime_log.err
[2025-06-04 08:56:39] -rw-r--r--. 1 boincer umatlas     21490 Jun  4 08:56 stderr.txt
[2025-06-04 08:56:39] HITS file was successfully produced:
[2025-06-04 08:56:39] -rw-------. 1 boincer umatlas 173171058 Jun  4 08:55 shared/HITS.pool.root.1
[2025-06-04 08:56:39]  *** Contents of shared directory: ***
[2025-06-04 08:56:39] total 380512
[2025-06-04 08:56:39] -rw-r--r--. 2 boincer umatlas 215212369 Jun  4 07:49 ATLAS.root_0
[2025-06-04 08:56:39] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:49 start_atlas.sh
[2025-06-04 08:56:39] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 07:49 input.tar.gz
[2025-06-04 08:56:39] -rw-------. 1 boincer umatlas 173171058 Jun  4 08:55 HITS.pool.root.1
[2025-06-04 08:56:39] -rw-------. 1 boincer umatlas    716800 Jun  4 08:56 result.tar.gz
08:56:40 (600355): run_atlas exited; CPU time 24956.605789
08:56:40 (600355): called boinc_finish(0)

</stderr_txt>
]]>

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