Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:02:28 (7889): wrapper (7.7.26015): starting
08:02:28 (7889): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 08:02:28] Arguments: --nthreads 12
[2025-06-04 08:02:28] Threads: 12
[2025-06-04 08:02:28] Checking for CVMFS
[2025-06-04 08:02:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:02:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:02:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:02:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:02:28] 2.11.2.0 3087 35611 88276 146779 3 56 12984694 20275200 1 130560 0 16377902 99.987 5814796 7181 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 08:02:28] CVMFS is ok
[2025-06-04 08:02:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:02:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:02:28] Further information can be found at the LHC@home message board.
[2025-06-04 08:02:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:02:28] Checking for apptainer binary...
[2025-06-04 08:02:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:02:28] Running /usr/bin/apptainer --version
[2025-06-04 08:02:28] apptainer version 1.3.2-1.el7
[2025-06-04 08:02:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:02:30] c-115-42.aglt2.org
[2025-06-04 08:02:30] apptainer works
[2025-06-04 08:02:30] Set ATHENA_PROC_NUMBER=12
[2025-06-04 08:02:30] Set ATHENA_CORE_NUMBER=12
[2025-06-04 08:02:30] Starting ATLAS job with PandaID=6678391523
[2025-06-04 08:02:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:59:28]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:59:28]  guid=389a1464-a9e3-4fe5-8231-e7c227dbf012
[2025-06-04 08:59:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 08:59:28]  is_altstaged=None
[2025-06-04 08:59:28]  is_tar=False
[2025-06-04 08:59:28]  lfn=log.45006595._054885.job.log.tgz.1
[2025-06-04 08:59:28]  mtime=0
[2025-06-04 08:59:28]  protocol_id=None
[2025-06-04 08:59:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:59:28]  replicas=None
[2025-06-04 08:59:28]  scope=mc23_13p6TeV
[2025-06-04 08:59:28]  status=None
[2025-06-04 08:59:28]  status_code=0
[2025-06-04 08:59:28]  storage_token=
[2025-06-04 08:59:28]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678391523/log.45006595._054885.job.log.tgz.1
[2025-06-04 08:59:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/c8/log.45006595._054885.job.log.tgz.1
[2025-06-04 08:59:28]  workdir=None
[2025-06-04 08:59:28] ]
[2025-06-04 08:59:28] 2025-06-04 12:59:05,372 | INFO     | transferring file log.45006595._054885.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678391523/log.45006595._054885.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:59:28] 2025-06-04 12:59:05,373 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678391523/log.45006595._054885.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._054885.job
[2025-06-04 08:59:28] 2025-06-04 12:59:05,395 | INFO     | adding to output.list: log.45006595._054885.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/c8/log.45006595._054885.job.log.tg
[2025-06-04 08:59:28] 2025-06-04 12:59:05,396 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:59:28] 2025-06-04 12:59:05,396 | INFO     | summary of transferred files:
[2025-06-04 08:59:28] 2025-06-04 12:59:05,396 | INFO     |  -- lfn=log.45006595._054885.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:59:28] 2025-06-04 12:59:05,396 | INFO     | stage-out finished correctly
[2025-06-04 08:59:28] 2025-06-04 12:59:06,286 | INFO     | monitor loop #257: job 0:6678391523 is in state 'finished'
[2025-06-04 08:59:28] 2025-06-04 12:59:06,287 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:59:28] 2025-06-04 12:59:06,774 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:59:28] 2025-06-04 12:59:06,849 | INFO     | job 6678391523 has state=finished
[2025-06-04 08:59:28] 2025-06-04 12:59:06,850 | INFO     | preparing for final server update for job 6678391523 in state='finished'
[2025-06-04 08:59:28] 2025-06-04 12:59:06,850 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:59:28] 2025-06-04 12:59:06,850 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:59:28] 2025-06-04 12:59:06,850 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:59:28] 2025-06-04 12:59:06,851 | INFO     | job 6678391523 has finished - writing final server update
[2025-06-04 08:59:28] 2025-06-04 12:59:06,851 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:59:28] 2025-06-04 12:59:06,853 | INFO     | executing command: lscpu
[2025-06-04 08:59:28] 2025-06-04 12:59:06,880 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:59:28] 2025-06-04 12:59:08,433 | INFO     | PID=11552 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 08:59:28] 2025-06-04 12:59:08,790 | INFO     | monitor loop #258: job 0:6678391523 is in state 'finished'
[2025-06-04 08:59:28] 2025-06-04 12:59:08,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:59:28] 2025-06-04 12:59:11,293 | INFO     | monitor loop #259: job 0:6678391523 is in state 'finished'
[2025-06-04 08:59:28] 2025-06-04 12:59:11,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:59:28] 2025-06-04 12:59:12,331 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 08:59:28] 2025-06-04 12:59:12,332 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678391523/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:59:28] 2025-06-04 12:59:12,333 | INFO     | extracted standard info from prmon json
[2025-06-04 08:59:28] 2025-06-04 12:59:12,333 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:59:28] 2025-06-04 12:59:12,333 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:59:28] 2025-06-04 12:59:12,333 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:59:28] 2025-06-04 12:59:12,334 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:59:28] 2025-06-04 12:59:12,335 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:59:28] 2025-06-04 12:59:12,335 | INFO     | sum of square deviations: 34277852.0
[2025-06-04 08:59:28] 2025-06-04 12:59:12,336 | INFO     | sum of deviations: -2745023912.0
[2025-06-04 08:59:28] 2025-06-04 12:59:12,336 | INFO     | mean x: 1749040331.5
[2025-06-04 08:59:28] 2025-06-04 12:59:12,336 | INFO     | mean y: 2731178.3333333335
[2025-06-04 08:59:28] 2025-06-04 12:59:12,336 | INFO     | -- intersect: 140068611998.98413
[2025-06-04 08:59:28] 2025-06-04 12:59:12,336 | INFO     | intersect: 140068611998.98413
[2025-06-04 08:59:28] 2025-06-04 12:59:12,336 | INFO     | chi2: 0.04149595736844562
[2025-06-04 08:59:28] 2025-06-04 12:59:12,336 | INFO     | -- intersect: 140068611998.98413
[2025-06-04 08:59:28] 2025-06-04 12:59:12,336 | INFO     | current memory leak: -80.08 B/s (using 48 data points, chi2=0.04)
[2025-06-04 08:59:28] 2025-06-04 12:59:12,337 | INFO     | ..............................
[2025-06-04 08:59:28] 2025-06-04 12:59:12,337 | INFO     | . Timing measurements:
[2025-06-04 08:59:28] 2025-06-04 12:59:12,337 | INFO     | . get job = 0 s
[2025-06-04 08:59:28] 2025-06-04 12:59:12,337 | INFO     | . initial setup = 2 s
[2025-06-04 08:59:28] 2025-06-04 12:59:12,337 | INFO     | . payload setup = 9 s
[2025-06-04 08:59:28] 2025-06-04 12:59:12,337 | INFO     | . stage-in = 0 s
[2025-06-04 08:59:28] 2025-06-04 12:59:12,337 | INFO     | . payload execution = 3353 s
[2025-06-04 08:59:28] 2025-06-04 12:59:12,337 | INFO     | . stage-out = 0 s
[2025-06-04 08:59:28] 2025-06-04 12:59:12,338 | INFO     | . log creation = 0 s
[2025-06-04 08:59:28] 2025-06-04 12:59:12,338 | INFO     | ..............................
[2025-06-04 08:59:28] 2025-06-04 12:59:12,415 | INFO     | 
[2025-06-04 08:59:28] 2025-06-04 12:59:12,415 | INFO     | job summary report
[2025-06-04 08:59:28] 2025-06-04 12:59:12,415 | INFO     | --------------------------------------------------
[2025-06-04 08:59:28] 2025-06-04 12:59:12,416 | INFO     | PanDA job id: 6678391523
[2025-06-04 08:59:28] 2025-06-04 12:59:12,416 | INFO     | task id: 45006595
[2025-06-04 08:59:28] 2025-06-04 12:59:12,416 | INFO     | errors: (none)
[2025-06-04 08:59:28] 2025-06-04 12:59:12,416 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:59:28] 2025-06-04 12:59:12,416 | INFO     | pilot state: finished 
[2025-06-04 08:59:28] 2025-06-04 12:59:12,416 | INFO     | transexitcode: 0
[2025-06-04 08:59:28] 2025-06-04 12:59:12,417 | INFO     | exeerrorcode: 0
[2025-06-04 08:59:28] 2025-06-04 12:59:12,417 | INFO     | exeerrordiag: 
[2025-06-04 08:59:28] 2025-06-04 12:59:12,417 | INFO     | exitcode: 0
[2025-06-04 08:59:28] 2025-06-04 12:59:12,417 | INFO     | exitmsg: OK
[2025-06-04 08:59:28] 2025-06-04 12:59:12,417 | INFO     | cpuconsumptiontime: 35830 s
[2025-06-04 08:59:28] 2025-06-04 12:59:12,417 | INFO     | nevents: 400
[2025-06-04 08:59:28] 2025-06-04 12:59:12,418 | INFO     | neventsw: 0
[2025-06-04 08:59:28] 2025-06-04 12:59:12,418 | INFO     | pid: 18025
[2025-06-04 08:59:28] 2025-06-04 12:59:12,418 | INFO     | pgrp: 18025
[2025-06-04 08:59:28] 2025-06-04 12:59:12,418 | INFO     | corecount: 12
[2025-06-04 08:59:28] 2025-06-04 12:59:12,418 | INFO     | event service: False
[2025-06-04 08:59:28] 2025-06-04 12:59:12,418 | INFO     | sizes: {0: 2397342, 1: 2397342, 5: 2397576, 11: 2397632, 3365: 2423116, 3367: 2432057, 3368: 2432241, 3374: 2432411}
[2025-06-04 08:59:28] 2025-06-04 12:59:12,418 | INFO     | --------------------------------------------------
[2025-06-04 08:59:28] 2025-06-04 12:59:12,419 | INFO     | 
[2025-06-04 08:59:28] 2025-06-04 12:59:12,419 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:59:28] 2025-06-04 12:59:12,444 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:59:28] 2025-06-04 12:59:12,445 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:59:28] 2025-06-04 12:59:12,445 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:59:28] 2025-06-04 12:59:12,445 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:59:28] 2025-06-04 12:59:12,445 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:59:28] 2025-06-04 12:59:12,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:59:28] 2025-06-04 12:59:12,445 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:59:28] 2025-06-04 12:59:12,446 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:59:28] 2025-06-04 12:59:12,446 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:59:28] 2025-06-04 12:59:12,446 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:59:28] 2025-06-04 12:59:12,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:59:28] 2025-06-04 12:59:12,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:59:28] 2025-06-04 12:59:12,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:59:28] 2025-06-04 12:59:12,447 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:59:28] 2025-06-04 12:59:12,447 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:59:28] 2025-06-04 12:59:12,447 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:59:28] 2025-06-04 12:59:12,447 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:59:28] 2025-06-04 12:59:12,447 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:59:28] 2025-06-04 12:59:12,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:59:28] 2025-06-04 12:59:12,448 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:59:28] 2025-06-04 12:59:12,448 | INFO     | job 6678391523 has completed (purged errors)
[2025-06-04 08:59:28] 2025-06-04 12:59:12,448 | INFO     | overall cleanup function is called
[2025-06-04 08:59:28] 2025-06-04 12:59:13,456 | INFO     | --- collectZombieJob: --- 10, [18025]
[2025-06-04 08:59:28] 2025-06-04 12:59:13,456 | INFO     | zombie collector waiting for pid 18025
[2025-06-04 08:59:28] 2025-06-04 12:59:13,456 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:59:28] 2025-06-04 12:59:13,456 | INFO     | collected zombie processes
[2025-06-04 08:59:28] 2025-06-04 12:59:13,456 | INFO     | will attempt to kill all subprocesses of pid=18025
[2025-06-04 08:59:28] 2025-06-04 12:59:13,544 | INFO     | process IDs to be killed: [18025] (in reverse order)
[2025-06-04 08:59:28] 2025-06-04 12:59:13,594 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:59:28] 2025-06-04 12:59:13,594 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:59:28] 2025-06-04 12:59:13,598 | INFO     | did not find any defunct processes belonging to 18025
[2025-06-04 08:59:28] 2025-06-04 12:59:13,602 | INFO     | did not find any defunct processes belonging to 18025
[2025-06-04 08:59:28] 2025-06-04 12:59:13,602 | INFO     | ready for new job
[2025-06-04 08:59:28] 2025-06-04 12:59:13,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:59:28] 2025-06-04 12:59:13,604 | INFO     | **************************************
[2025-06-04 08:59:28] 2025-06-04 12:59:13,604 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:59:28] 2025-06-04 12:59:13,604 | INFO     | **************************************
[2025-06-04 08:59:28] 2025-06-04 12:59:13,604 | INFO     | 
[2025-06-04 08:59:28] 2025-06-04 12:59:13,604 | INFO     | architecture information:
[2025-06-04 08:59:28] 2025-06-04 12:59:13,605 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:59:28] 2025-06-04 12:59:13,618 | INFO     | cat /etc/os-release:
[2025-06-04 08:59:28] NAME="CentOS Linux"
[2025-06-04 08:59:28] VERSION="7 (Core)"
[2025-06-04 08:59:28] ID="centos"
[2025-06-04 08:59:28] ID_LIKE="rhel fedora"
[2025-06-04 08:59:28] VERSION_ID="7"
[2025-06-04 08:59:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:59:28] ANSI_COLOR="0;31"
[2025-06-04 08:59:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:59:28] HOME_URL="https://www.centos.org/"
[2025-06-04 08:59:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:59:28] 
[2025-06-04 08:59:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:59:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:59:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:59:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:59:28] 
[2025-06-04 08:59:28] 2025-06-04 12:59:13,619 | INFO     | **************************************
[2025-06-04 08:59:28] 2025-06-04 12:59:14,122 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:59:28] 2025-06-04 12:59:14,160 | INFO     | sufficient remaining disk space (18646827008 B)
[2025-06-04 08:59:28] 2025-06-04 12:59:14,160 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:59:28] 2025-06-04 12:59:14,161 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:59:28] 2025-06-04 12:59:14,161 | INFO     | update_server=False
[2025-06-04 08:59:28] 2025-06-04 12:59:14,161 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:59:28] 2025-06-04 12:59:14,161 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:59:28] 2025-06-04 12:59:14,162 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:59:28] 2025-06-04 12:59:14,449 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:59:28] 2025-06-04 12:59:14,449 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:59:28] 2025-06-04 12:59:14,450 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:59:28] 2025-06-04 12:59:14,801 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:59:28] 2025-06-04 12:59:14,802 | INFO     | aborting loop
[2025-06-04 08:59:28] 2025-06-04 12:59:14,918 | INFO     | all payload control threads have been joined
[2025-06-04 08:59:28] 2025-06-04 12:59:15,001 | INFO     | all data control threads have been joined
[2025-06-04 08:59:28] 2025-06-04 12:59:15,167 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:59:28] 2025-06-04 12:59:15,167 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:59:28] 2025-06-04 12:59:15,473 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:59:28] 2025-06-04 12:59:15,528 | INFO     | all job control threads have been joined
[2025-06-04 08:59:28] 2025-06-04 12:59:15,726 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:59:28] 2025-06-04 12:59:15,817 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:59:28] 2025-06-04 12:59:15,835 | INFO     | [job] validate thread has finished
[2025-06-04 08:59:28] 2025-06-04 12:59:15,923 | INFO     | [payload] control thread has finished
[2025-06-04 08:59:28] 2025-06-04 12:59:16,006 | INFO     | [data] control thread has finished
[2025-06-04 08:59:28] 2025-06-04 12:59:16,167 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:59:28] 2025-06-04 12:59:16,250 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:59:28] 2025-06-04 12:59:16,378 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:59:28] 2025-06-04 12:59:16,430 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:59:28] 2025-06-04 12:59:16,472 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:59:28] 2025-06-04 12:59:16,492 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:59:28] 2025-06-04 12:59:16,533 | INFO     | [job] control thread has finished
[2025-06-04 08:59:28] 2025-06-04 12:59:17,364 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:59:28] 2025-06-04 12:59:21,365 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:59:28] 2025-06-04 12:59:23,148 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139639584122688)>', '<ExcThread(monitor, started 139638765246208)>']
[2025-06-04 08:59:28] 2025-06-04 12:59:23,491 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:59:28] 2025-06-04 12:59:23,492 | INFO     | [monitor] control thread has ended
[2025-06-04 08:59:28] 2025-06-04 12:59:28,172 | INFO     | all workflow threads have been joined
[2025-06-04 08:59:28] 2025-06-04 12:59:28,172 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:59:28] 2025-06-04 12:59:28,172 | INFO     | traces error code: 0
[2025-06-04 08:59:28] 2025-06-04 12:59:28,173 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:59:28] 2025-06-04 12:59:28,257 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:59:28] 2025-06-04 12:59:28,261 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:59:28] 2025-06-04 12:59:28,265 [wrapper] pilotpid: 11552
[2025-06-04 08:59:28] 2025-06-04 12:59:28,269 [wrapper] Pilot exit status: 0
[2025-06-04 08:59:28] 2025-06-04 12:59:28,285 [wrapper] pandaids: 6678391523
[2025-06-04 08:59:28] 2025-06-04 12:59:28,321 [wrapper] cleanup supervisor_pilot  8272 11553
[2025-06-04 08:59:28] 2025-06-04 12:59:28,325 [wrapper] Test setup, not cleaning
[2025-06-04 08:59:28] 2025-06-04 12:59:28,329 [wrapper] apfmon messages muted
[2025-06-04 08:59:28] 2025-06-04 12:59:28,333 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:59:28] 2025-06-04 12:59:28,337 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:59:28]  *** Error codes and diagnostics ***
[2025-06-04 08:59:28]     "exeErrorCode": 0,
[2025-06-04 08:59:28]     "exeErrorDiag": "",
[2025-06-04 08:59:28]     "pilotErrorCode": 0,
[2025-06-04 08:59:28]     "pilotErrorDiag": "",
[2025-06-04 08:59:28]  *** Listing of results directory ***
[2025-06-04 08:59:28] total 383656
[2025-06-04 08:59:28] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:04 pilot3.tar.gz
[2025-06-04 08:59:28] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:27 queuedata.json
[2025-06-04 08:59:28] -rwx------ 1 boincer umatlas     37140 Jun  4 03:29 runpilot2-wrapper.sh
[2025-06-04 08:59:28] -rw-r--r-- 1 boincer umatlas       100 Jun  4 08:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:59:28] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 08:02 run_atlas
[2025-06-04 08:59:28] -rw-r--r-- 1 boincer umatlas       105 Jun  4 08:02 job.xml
[2025-06-04 08:59:28] -rw-r--r-- 2 boincer umatlas 215212369 Jun  4 08:02 EVNT.45006593._002196.pool.root.1
[2025-06-04 08:59:28] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:02 start_atlas.sh
[2025-06-04 08:59:28] drwxrwx--x 2 boincer umatlas      4096 Jun  4 08:02 shared
[2025-06-04 08:59:28] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 08:02 input.tar.gz
[2025-06-04 08:59:28] -rw-r--r-- 1 boincer umatlas         0 Jun  4 08:02 boinc_lockfile
[2025-06-04 08:59:28] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 08:02 pandaJob.out
[2025-06-04 08:59:28] -rw------- 1 boincer umatlas    986812 Jun  4 08:02 agis_schedconf.cvmfs.json
[2025-06-04 08:59:28] -rw------- 1 boincer umatlas   1598969 Jun  4 08:02 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:59:28] drwx------ 4 boincer umatlas      4096 Jun  4 08:02 pilot3
[2025-06-04 08:59:28] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 08:56 init_data.xml
[2025-06-04 08:59:28] -rw------- 1 boincer umatlas        95 Jun  4 08:58 pilot_heartbeat.json
[2025-06-04 08:59:28] -rw------- 1 boincer umatlas 172444279 Jun  4 08:58 HITS.45006595._054885.pool.root.1
[2025-06-04 08:59:28] -rw-r--r-- 1 boincer umatlas       529 Jun  4 08:58 boinc_task_state.xml
[2025-06-04 08:59:28] -rw------- 1 boincer umatlas      1049 Jun  4 08:59 memory_monitor_summary.json
[2025-06-04 08:59:28] -rw------- 1 boincer umatlas    349143 Jun  4 08:59 log.45006595._054885.job.log.tgz.1
[2025-06-04 08:59:28] -rw------- 1 boincer umatlas      7753 Jun  4 08:59 heartbeat.json
[2025-06-04 08:59:28] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 08:59 boinc_mmap_file
[2025-06-04 08:59:28] -rw-r--r-- 1 boincer umatlas        27 Jun  4 08:59 wrapper_checkpoint.txt
[2025-06-04 08:59:28] -rw------- 1 boincer umatlas      4353 Jun  4 08:59 pilotlog.txt
[2025-06-04 08:59:28] -rw------- 1 boincer umatlas    338575 Jun  4 08:59 log.45006595._054885.job.log.1
[2025-06-04 08:59:28] -rw------- 1 boincer umatlas       357 Jun  4 08:59 output.list
[2025-06-04 08:59:28] -rw-r--r-- 1 boincer umatlas       620 Jun  4 08:59 runtime_log
[2025-06-04 08:59:28] -rw------- 1 boincer umatlas    706560 Jun  4 08:59 result.tar.gz
[2025-06-04 08:59:28] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 08:59 runtime_log.err
[2025-06-04 08:59:28] -rw------- 1 boincer umatlas       659 Jun  4 08:59 7lhNDmRkxg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXuaKDmsvusJm.diag
[2025-06-04 08:59:28] -rw-r--r-- 1 boincer umatlas     21389 Jun  4 08:59 stderr.txt
[2025-06-04 08:59:28] HITS file was successfully produced:
[2025-06-04 08:59:28] -rw------- 1 boincer umatlas 172444279 Jun  4 08:58 shared/HITS.pool.root.1
[2025-06-04 08:59:28]  *** Contents of shared directory: ***
[2025-06-04 08:59:28] total 379788
[2025-06-04 08:59:28] -rw-r--r-- 2 boincer umatlas 215212369 Jun  4 08:02 ATLAS.root_0
[2025-06-04 08:59:28] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:02 start_atlas.sh
[2025-06-04 08:59:28] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 08:02 input.tar.gz
[2025-06-04 08:59:28] -rw------- 1 boincer umatlas 172444279 Jun  4 08:58 HITS.pool.root.1
[2025-06-04 08:59:28] -rw------- 1 boincer umatlas    706560 Jun  4 08:59 result.tar.gz
08:59:29 (7889): run_atlas exited; CPU time 35814.990254
08:59:29 (7889): called boinc_finish(0)

</stderr_txt>
]]>

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