Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:01:35 (87142): wrapper (7.7.26015): starting
08:01:35 (87142): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 08:01:35] Arguments: --nthreads 8
[2025-06-04 08:01:35] Threads: 8
[2025-06-04 08:01:35] Checking for CVMFS
[2025-06-04 08:01:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:01:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:01:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:01:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:01:36] 2.11.2.0 125399 12689 271360 146779 1 556 11097210 18432000 15201 130560 0 103943353 99.431 107610634 36918 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 08:01:36] CVMFS is ok
[2025-06-04 08:01:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:01:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:01:36] Further information can be found at the LHC@home message board.
[2025-06-04 08:01:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:01:36] Checking for apptainer binary...
[2025-06-04 08:01:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:01:36] Running /usr/bin/apptainer --version
[2025-06-04 08:01:36] apptainer version 1.3.2-1.el7
[2025-06-04 08:01:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:01:37] c-211-35-2.aglt2.org
[2025-06-04 08:01:37] apptainer works
[2025-06-04 08:01:37] Set ATHENA_PROC_NUMBER=8
[2025-06-04 08:01:37] Set ATHENA_CORE_NUMBER=8
[2025-06-04 08:01:37] Starting ATLAS job with PandaID=6678390278
[2025-06-04 08:01:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:28:33]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:28:33]  domain=
[2025-06-04 09:28:33]  filesize=303203
[2025-06-04 09:28:33]  filetype=log
[2025-06-04 09:28:33]  guid=8f11445e-750a-4a11-9dae-ade86e55bdef
[2025-06-04 09:28:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 09:28:33]  is_altstaged=None
[2025-06-04 09:28:33]  is_tar=False
[2025-06-04 09:28:33]  lfn=log.45006595._054729.job.log.tgz.1
[2025-06-04 09:28:33]  mtime=0
[2025-06-04 09:28:33]  protocol_id=None
[2025-06-04 09:28:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:28:33]  replicas=None
[2025-06-04 09:28:33]  scope=mc23_13p6TeV
[2025-06-04 09:28:33]  status=None
[2025-06-04 09:28:33]  status_code=0
[2025-06-04 09:28:33]  storage_token=
[2025-06-04 09:28:33]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678390278/log.45006595._054729.job.log.tgz.1
[2025-06-04 09:28:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/53/log.45006595._054729.job.log.tgz.1
[2025-06-04 09:28:33]  workdir=None
[2025-06-04 09:28:33] ]
[2025-06-04 09:28:33] 2025-06-04 13:28:17,271 | INFO     | transferring file log.45006595._054729.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678390278/log.45006595._054729.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:28:33] 2025-06-04 13:28:17,272 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678390278/log.45006595._054729.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._054729.job
[2025-06-04 09:28:33] 2025-06-04 13:28:17,288 | INFO     | adding to output.list: log.45006595._054729.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/53/log.45006595._054729.job.log.tg
[2025-06-04 09:28:33] 2025-06-04 13:28:17,289 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:28:33] 2025-06-04 13:28:17,289 | INFO     | summary of transferred files:
[2025-06-04 09:28:33] 2025-06-04 13:28:17,290 | INFO     |  -- lfn=log.45006595._054729.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:28:33] 2025-06-04 13:28:17,290 | INFO     | stage-out finished correctly
[2025-06-04 09:28:33] 2025-06-04 13:28:17,393 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:28:33] 2025-06-04 13:28:17,486 | INFO     | job 6678390278 has state=finished
[2025-06-04 09:28:33] 2025-06-04 13:28:17,487 | INFO     | preparing for final server update for job 6678390278 in state='finished'
[2025-06-04 09:28:33] 2025-06-04 13:28:17,487 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:28:33] 2025-06-04 13:28:17,487 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:28:33] 2025-06-04 13:28:17,487 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:28:33] 2025-06-04 13:28:17,488 | INFO     | job 6678390278 has finished - writing final server update
[2025-06-04 09:28:33] 2025-06-04 13:28:17,488 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:28:33] 2025-06-04 13:28:17,492 | INFO     | executing command: lscpu
[2025-06-04 09:28:33] 2025-06-04 13:28:17,569 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:28:33] 2025-06-04 13:28:18,169 | INFO     | monitor loop #386: job 0:6678390278 is in state 'finished'
[2025-06-04 09:28:33] 2025-06-04 13:28:18,169 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:28:33] 2025-06-04 13:28:20,672 | INFO     | monitor loop #387: job 0:6678390278 is in state 'finished'
[2025-06-04 09:28:33] 2025-06-04 13:28:20,673 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:28:33] 2025-06-04 13:28:21,399 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:28:33] 2025-06-04 13:28:21,400 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678390278/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:28:33] 2025-06-04 13:28:21,400 | INFO     | extracted standard info from prmon json
[2025-06-04 09:28:33] 2025-06-04 13:28:21,400 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:28:33] 2025-06-04 13:28:21,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:28:33] 2025-06-04 13:28:21,401 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:28:33] 2025-06-04 13:28:21,401 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:28:33] 2025-06-04 13:28:21,403 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:28:33] 2025-06-04 13:28:21,403 | INFO     | sum of square deviations: 147126479.5
[2025-06-04 09:28:33] 2025-06-04 13:28:21,403 | INFO     | sum of deviations: -146176373.99999988
[2025-06-04 09:28:33] 2025-06-04 13:28:21,404 | INFO     | mean x: 1749041189.5
[2025-06-04 09:28:33] 2025-06-04 13:28:21,404 | INFO     | mean y: 2491686.846153846
[2025-06-04 09:28:33] 2025-06-04 13:28:21,404 | INFO     | -- intersect: 1740238011.8219829
[2025-06-04 09:28:33] 2025-06-04 13:28:21,404 | INFO     | intersect: 1740238011.8219829
[2025-06-04 09:28:33] 2025-06-04 13:28:21,404 | INFO     | chi2: 0.014519711162072582
[2025-06-04 09:28:33] 2025-06-04 13:28:21,404 | INFO     | -- intersect: 1740238011.8219829
[2025-06-04 09:28:33] 2025-06-04 13:28:21,404 | INFO     | current memory leak: -0.99 B/s (using 78 data points, chi2=0.01)
[2025-06-04 09:28:33] 2025-06-04 13:28:21,405 | INFO     | ..............................
[2025-06-04 09:28:33] 2025-06-04 13:28:21,405 | INFO     | . Timing measurements:
[2025-06-04 09:28:33] 2025-06-04 13:28:21,405 | INFO     | . get job = 0 s
[2025-06-04 09:28:33] 2025-06-04 13:28:21,405 | INFO     | . initial setup = 2 s
[2025-06-04 09:28:33] 2025-06-04 13:28:21,405 | INFO     | . payload setup = 8 s
[2025-06-04 09:28:33] 2025-06-04 13:28:21,405 | INFO     | . stage-in = 0 s
[2025-06-04 09:28:33] 2025-06-04 13:28:21,405 | INFO     | . payload execution = 5163 s
[2025-06-04 09:28:33] 2025-06-04 13:28:21,405 | INFO     | . stage-out = 0 s
[2025-06-04 09:28:33] 2025-06-04 13:28:21,405 | INFO     | . log creation = 0 s
[2025-06-04 09:28:33] 2025-06-04 13:28:21,405 | INFO     | ..............................
[2025-06-04 09:28:33] 2025-06-04 13:28:21,571 | INFO     | 
[2025-06-04 09:28:33] 2025-06-04 13:28:21,571 | INFO     | job summary report
[2025-06-04 09:28:33] 2025-06-04 13:28:21,571 | INFO     | --------------------------------------------------
[2025-06-04 09:28:33] 2025-06-04 13:28:21,571 | INFO     | PanDA job id: 6678390278
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | task id: 45006595
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | errors: (none)
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | pilot state: finished 
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | transexitcode: 0
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | exeerrorcode: 0
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | exeerrordiag: 
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | exitcode: 0
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | exitmsg: OK
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | cpuconsumptiontime: 36190 s
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | nevents: 400
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | neventsw: 0
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | pid: 99975
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | pgrp: 99975
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | corecount: 8
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | event service: False
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | sizes: {0: 2397342, 6: 2397548, 11: 2397576, 5175: 2423851, 5176: 2432848, 5180: 2432962}
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | --------------------------------------------------
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | 
[2025-06-04 09:28:33] 2025-06-04 13:28:21,572 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 09:28:33] 2025-06-04 13:28:21,592 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:28:33] 2025-06-04 13:28:21,592 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:28:33] 2025-06-04 13:28:21,592 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:28:33] 2025-06-04 13:28:21,592 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:28:33] 2025-06-04 13:28:21,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:28:33] 2025-06-04 13:28:21,592 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:28:33] 2025-06-04 13:28:21,592 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:28:33] 2025-06-04 13:28:21,592 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:28:33] 2025-06-04 13:28:21,592 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:28:33] 2025-06-04 13:28:21,592 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:28:33] 2025-06-04 13:28:21,592 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:28:33] 2025-06-04 13:28:21,593 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:28:33] 2025-06-04 13:28:21,593 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:28:33] 2025-06-04 13:28:21,593 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:28:33] 2025-06-04 13:28:21,593 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:28:33] 2025-06-04 13:28:21,593 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:28:33] 2025-06-04 13:28:21,593 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:28:33] 2025-06-04 13:28:21,593 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:28:33] 2025-06-04 13:28:21,593 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:28:33] 2025-06-04 13:28:21,593 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:28:33] 2025-06-04 13:28:21,593 | INFO     | job 6678390278 has completed (purged errors)
[2025-06-04 09:28:33] 2025-06-04 13:28:21,593 | INFO     | overall cleanup function is called
[2025-06-04 09:28:33] 2025-06-04 13:28:22,600 | INFO     | --- collectZombieJob: --- 10, [99975]
[2025-06-04 09:28:33] 2025-06-04 13:28:22,600 | INFO     | zombie collector waiting for pid 99975
[2025-06-04 09:28:33] 2025-06-04 13:28:22,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:28:33] 2025-06-04 13:28:22,601 | INFO     | collected zombie processes
[2025-06-04 09:28:33] 2025-06-04 13:28:22,601 | INFO     | will attempt to kill all subprocesses of pid=99975
[2025-06-04 09:28:33] 2025-06-04 13:28:22,990 | INFO     | process IDs to be killed: [99975] (in reverse order)
[2025-06-04 09:28:33] 2025-06-04 13:28:23,101 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:28:33] 2025-06-04 13:28:23,102 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:28:33] 2025-06-04 13:28:23,112 | INFO     | did not find any defunct processes belonging to 99975
[2025-06-04 09:28:33] 2025-06-04 13:28:23,122 | INFO     | did not find any defunct processes belonging to 99975
[2025-06-04 09:28:33] 2025-06-04 13:28:23,122 | INFO     | ready for new job
[2025-06-04 09:28:33] 2025-06-04 13:28:23,122 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:28:33] 2025-06-04 13:28:23,123 | INFO     | **************************************
[2025-06-04 09:28:33] 2025-06-04 13:28:23,124 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:28:33] 2025-06-04 13:28:23,124 | INFO     | **************************************
[2025-06-04 09:28:33] 2025-06-04 13:28:23,124 | INFO     | 
[2025-06-04 09:28:33] 2025-06-04 13:28:23,129 | INFO     | architecture information:
[2025-06-04 09:28:33] 2025-06-04 13:28:23,130 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:28:33] 2025-06-04 13:28:23,145 | INFO     | cat /etc/os-release:
[2025-06-04 09:28:33] NAME="CentOS Linux"
[2025-06-04 09:28:33] VERSION="7 (Core)"
[2025-06-04 09:28:33] ID="centos"
[2025-06-04 09:28:33] ID_LIKE="rhel fedora"
[2025-06-04 09:28:33] VERSION_ID="7"
[2025-06-04 09:28:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:28:33] ANSI_COLOR="0;31"
[2025-06-04 09:28:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:28:33] HOME_URL="https://www.centos.org/"
[2025-06-04 09:28:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:28:33] 
[2025-06-04 09:28:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:28:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:28:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:28:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:28:33] 
[2025-06-04 09:28:33] 2025-06-04 13:28:23,145 | INFO     | **************************************
[2025-06-04 09:28:33] 2025-06-04 13:28:23,648 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 09:28:33] 2025-06-04 13:28:23,676 | INFO     | sufficient remaining disk space (103720943616 B)
[2025-06-04 09:28:33] 2025-06-04 13:28:23,676 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:28:33] 2025-06-04 13:28:23,676 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:28:33] 2025-06-04 13:28:23,676 | INFO     | update_server=False
[2025-06-04 09:28:33] 2025-06-04 13:28:23,677 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:28:33] 2025-06-04 13:28:23,677 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:28:33] 2025-06-04 13:28:23,677 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:28:33] 2025-06-04 13:28:23,701 | INFO     | all job control threads have been joined
[2025-06-04 09:28:33] 2025-06-04 13:28:23,906 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:28:33] 2025-06-04 13:28:23,906 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:28:33] 2025-06-04 13:28:23,906 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:28:33] 2025-06-04 13:28:24,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:28:33] 2025-06-04 13:28:24,182 | INFO     | aborting loop
[2025-06-04 09:28:33] 2025-06-04 13:28:24,681 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:28:33] 2025-06-04 13:28:24,706 | INFO     | [job] control thread has finished
[2025-06-04 09:28:33] 2025-06-04 13:28:24,766 | INFO     | all data control threads have been joined
[2025-06-04 09:28:33] 2025-06-04 13:28:25,036 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:28:33] 2025-06-04 13:28:25,072 | INFO     | all payload control threads have been joined
[2025-06-04 09:28:33] 2025-06-04 13:28:25,187 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:28:33] 2025-06-04 13:28:25,568 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:28:33] 2025-06-04 13:28:25,580 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:28:33] 2025-06-04 13:28:25,613 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:28:33] 2025-06-04 13:28:25,683 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:28:33] 2025-06-04 13:28:25,769 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:28:33] 2025-06-04 13:28:25,770 | INFO     | [data] control thread has finished
[2025-06-04 09:28:33] 2025-06-04 13:28:25,844 | INFO     | [job] validate thread has finished
[2025-06-04 09:28:33] 2025-06-04 13:28:25,867 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:28:33] 2025-06-04 13:28:25,909 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:28:33] 2025-06-04 13:28:26,077 | INFO     | [payload] control thread has finished
[2025-06-04 09:28:33] 2025-06-04 13:28:26,496 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:28:33] 2025-06-04 13:28:27,500 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:28:33] 2025-06-04 13:28:27,681 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:28:33] 2025-06-04 13:28:28,034 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140230249965376)>', '<ExcThread(monitor, started 140229667186432)>']
[2025-06-04 09:28:33] 2025-06-04 13:28:28,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:28:33] 2025-06-04 13:28:28,932 | INFO     | [monitor] control thread has ended
[2025-06-04 09:28:33] 2025-06-04 13:28:33,059 | INFO     | all workflow threads have been joined
[2025-06-04 09:28:33] 2025-06-04 13:28:33,060 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:28:33] 2025-06-04 13:28:33,060 | INFO     | traces error code: 0
[2025-06-04 09:28:33] 2025-06-04 13:28:33,060 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:28:33] 2025-06-04 13:28:33,195 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:28:33] 2025-06-04 13:28:33,199 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:28:33] 2025-06-04 13:28:33,201 [wrapper] pilotpid: 92899
[2025-06-04 09:28:33] 2025-06-04 13:28:33,204 [wrapper] Pilot exit status: 0
[2025-06-04 09:28:33] 2025-06-04 13:28:33,215 [wrapper] pandaids: 6678390278
[2025-06-04 09:28:33] 2025-06-04 13:28:33,293 [wrapper] cleanup supervisor_pilot   2144 92900
[2025-06-04 09:28:33] 2025-06-04 13:28:33,296 [wrapper] Test setup, not cleaning
[2025-06-04 09:28:33] 2025-06-04 13:28:33,298 [wrapper] apfmon messages muted
[2025-06-04 09:28:33] 2025-06-04 13:28:33,300 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:28:33] 2025-06-04 13:28:33,302 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:28:33]  *** Error codes and diagnostics ***
[2025-06-04 09:28:33]     "exeErrorCode": 0,
[2025-06-04 09:28:33]     "exeErrorDiag": "",
[2025-06-04 09:28:33]     "pilotErrorCode": 0,
[2025-06-04 09:28:33]     "pilotErrorDiag": "",
[2025-06-04 09:28:33]  *** Listing of results directory ***
[2025-06-04 09:28:33] total 396108
[2025-06-04 09:28:33] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:04 pilot3.tar.gz
[2025-06-04 09:28:33] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:24 queuedata.json
[2025-06-04 09:28:33] -rwx------ 1 boincer umatlas     37140 Jun  4 03:25 runpilot2-wrapper.sh
[2025-06-04 09:28:33] -rw-r--r-- 1 boincer umatlas       100 Jun  4 08:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:28:33] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 08:01 run_atlas
[2025-06-04 09:28:33] -rw-r--r-- 1 boincer umatlas       105 Jun  4 08:01 job.xml
[2025-06-04 09:28:33] -rw-r--r-- 2 boincer umatlas 214969492 Jun  4 08:01 EVNT.45006593._002190.pool.root.1
[2025-06-04 09:28:33] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:01 start_atlas.sh
[2025-06-04 09:28:33] drwxrwx--x 2 boincer umatlas      4096 Jun  4 08:01 shared
[2025-06-04 09:28:33] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 08:01 input.tar.gz
[2025-06-04 09:28:33] -rw-r--r-- 1 boincer umatlas         0 Jun  4 08:01 boinc_lockfile
[2025-06-04 09:28:33] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 08:01 pandaJob.out
[2025-06-04 09:28:33] -rw------- 1 boincer umatlas    986812 Jun  4 08:01 agis_schedconf.cvmfs.json
[2025-06-04 09:28:33] -rw------- 1 boincer umatlas   1598969 Jun  4 08:01 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:28:33] drwx------ 4 boincer umatlas      4096 Jun  4 08:01 pilot3
[2025-06-04 09:28:33] -rw-r--r-- 1 boincer umatlas      6383 Jun  4 09:27 init_data.xml
[2025-06-04 09:28:33] -rw------- 1 boincer umatlas 185200093 Jun  4 09:27 HITS.45006595._054729.pool.root.1
[2025-06-04 09:28:33] -rw-r--r-- 1 boincer umatlas       529 Jun  4 09:27 boinc_task_state.xml
[2025-06-04 09:28:33] -rw------- 1 boincer umatlas      1054 Jun  4 09:28 memory_monitor_summary.json
[2025-06-04 09:28:33] -rw------- 1 boincer umatlas    303203 Jun  4 09:28 log.45006595._054729.job.log.tgz.1
[2025-06-04 09:28:33] -rw------- 1 boincer umatlas      7739 Jun  4 09:28 heartbeat.json
[2025-06-04 09:28:33] -rw------- 1 boincer umatlas        95 Jun  4 09:28 pilot_heartbeat.json
[2025-06-04 09:28:33] -rw-r--r-- 1 boincer umatlas        27 Jun  4 09:28 wrapper_checkpoint.txt
[2025-06-04 09:28:33] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 09:28 boinc_mmap_file
[2025-06-04 09:28:33] -rw------- 1 boincer umatlas      4354 Jun  4 09:28 pilotlog.txt
[2025-06-04 09:28:33] -rw------- 1 boincer umatlas    502782 Jun  4 09:28 log.45006595._054729.job.log.1
[2025-06-04 09:28:33] -rw------- 1 boincer umatlas       357 Jun  4 09:28 output.list
[2025-06-04 09:28:33] -rw-r--r-- 1 boincer umatlas       620 Jun  4 09:28 runtime_log
[2025-06-04 09:28:33] -rw------- 1 boincer umatlas    829440 Jun  4 09:28 result.tar.gz
[2025-06-04 09:28:33] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 09:28 runtime_log.err
[2025-06-04 09:28:33] -rw------- 1 boincer umatlas       658 Jun  4 09:28 Nj7MDmDgxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqbnKDmYBe0jn.diag
[2025-06-04 09:28:33] -rw-r--r-- 1 boincer umatlas     21006 Jun  4 09:28 stderr.txt
[2025-06-04 09:28:33] HITS file was successfully produced:
[2025-06-04 09:28:33] -rw------- 1 boincer umatlas 185200093 Jun  4 09:27 shared/HITS.pool.root.1
[2025-06-04 09:28:33]  *** Contents of shared directory: ***
[2025-06-04 09:28:33] total 392124
[2025-06-04 09:28:33] -rw-r--r-- 2 boincer umatlas 214969492 Jun  4 08:01 ATLAS.root_0
[2025-06-04 09:28:33] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:01 start_atlas.sh
[2025-06-04 09:28:33] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 08:01 input.tar.gz
[2025-06-04 09:28:33] -rw------- 1 boincer umatlas 185200093 Jun  4 09:27 HITS.pool.root.1
[2025-06-04 09:28:33] -rw------- 1 boincer umatlas    829440 Jun  4 09:28 result.tar.gz
09:28:34 (87142): run_atlas exited; CPU time 36324.193043
09:28:34 (87142): called boinc_finish(0)

</stderr_txt>
]]>

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