Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:14:25 (166340): wrapper (7.7.26015): starting
08:14:25 (166340): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 08:14:25] Arguments: --nthreads 9
[2025-06-04 08:14:25] Threads: 9
[2025-06-04 08:14:25] Checking for CVMFS
[2025-06-04 08:14:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:14:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:14:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:14:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:14:25] 2.11.2.0 6636 28769 245612 146779 2 194 13158977 18432000 6777 130560 0 68514495 99.500 66405796 29061 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 08:14:25] CVMFS is ok
[2025-06-04 08:14:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:14:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:14:25] Further information can be found at the LHC@home message board.
[2025-06-04 08:14:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:14:25] Checking for apptainer binary...
[2025-06-04 08:14:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:14:25] Running /usr/bin/apptainer --version
[2025-06-04 08:14:25] apptainer version 1.3.2-1.el7
[2025-06-04 08:14:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:14:26] c-210-37-3.aglt2.org
[2025-06-04 08:14:26] apptainer works
[2025-06-04 08:14:26] Set ATHENA_PROC_NUMBER=9
[2025-06-04 08:14:26] Set ATHENA_CORE_NUMBER=9
[2025-06-04 08:14:26] Starting ATLAS job with PandaID=6678392048
[2025-06-04 08:14:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:28:09]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:28:09]  mtime=0
[2025-06-04 09:28:09]  protocol_id=None
[2025-06-04 09:28:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:28:09]  replicas=None
[2025-06-04 09:28:09]  scope=mc23_13p6TeV
[2025-06-04 09:28:09]  status=None
[2025-06-04 09:28:09]  status_code=0
[2025-06-04 09:28:09]  storage_token=
[2025-06-04 09:28:09]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678392048/log.45006595._055077.job.log.tgz.1
[2025-06-04 09:28:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/cd/log.45006595._055077.job.log.tgz.1
[2025-06-04 09:28:09]  workdir=None
[2025-06-04 09:28:09] ]
[2025-06-04 09:28:09] 2025-06-04 13:27:41,192 | INFO     | transferring file log.45006595._055077.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678392048/log.45006595._055077.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:28:09] 2025-06-04 13:27:41,192 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678392048/log.45006595._055077.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._055077.job
[2025-06-04 09:28:09] 2025-06-04 13:27:41,210 | INFO     | adding to output.list: log.45006595._055077.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/cd/log.45006595._055077.job.log.tg
[2025-06-04 09:28:09] 2025-06-04 13:27:41,211 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:28:09] 2025-06-04 13:27:41,211 | INFO     | summary of transferred files:
[2025-06-04 09:28:09] 2025-06-04 13:27:41,211 | INFO     |  -- lfn=log.45006595._055077.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:28:09] 2025-06-04 13:27:41,212 | INFO     | stage-out finished correctly
[2025-06-04 09:28:09] 2025-06-04 13:27:41,712 | INFO     | monitor loop #330: job 0:6678392048 is in state 'finished'
[2025-06-04 09:28:09] 2025-06-04 13:27:41,712 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:28:09] 2025-06-04 13:27:43,254 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:28:09] 2025-06-04 13:27:43,751 | INFO     | job 6678392048 has state=finished
[2025-06-04 09:28:09] 2025-06-04 13:27:43,752 | INFO     | preparing for final server update for job 6678392048 in state='finished'
[2025-06-04 09:28:09] 2025-06-04 13:27:43,752 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:28:09] 2025-06-04 13:27:43,753 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:28:09] 2025-06-04 13:27:43,753 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:28:09] 2025-06-04 13:27:43,753 | INFO     | job 6678392048 has finished - writing final server update
[2025-06-04 09:28:09] 2025-06-04 13:27:43,753 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:28:09] 2025-06-04 13:27:43,758 | INFO     | executing command: lscpu
[2025-06-04 09:28:09] 2025-06-04 13:27:43,950 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:28:09] 2025-06-04 13:27:44,215 | INFO     | monitor loop #331: job 0:6678392048 is in state 'finished'
[2025-06-04 09:28:09] 2025-06-04 13:27:44,215 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:28:09] 2025-06-04 13:27:46,718 | INFO     | monitor loop #332: job 0:6678392048 is in state 'finished'
[2025-06-04 09:28:09] 2025-06-04 13:27:46,718 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:28:09] 2025-06-04 13:27:48,981 | INFO     | PID=169967 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 09:28:09] 2025-06-04 13:27:48,981 | INFO     | .. there are 10 such processes running
[2025-06-04 09:28:09] 2025-06-04 13:27:49,065 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:28:09] 2025-06-04 13:27:49,065 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678392048/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:28:09] 2025-06-04 13:27:49,066 | INFO     | extracted standard info from prmon json
[2025-06-04 09:28:09] 2025-06-04 13:27:49,066 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:28:09] 2025-06-04 13:27:49,066 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:28:09] 2025-06-04 13:27:49,066 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:28:09] 2025-06-04 13:27:49,066 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:28:09] 2025-06-04 13:27:49,068 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:28:09] 2025-06-04 13:27:49,072 | INFO     | sum of square deviations: 85136480.0
[2025-06-04 09:28:09] 2025-06-04 13:27:49,072 | INFO     | sum of deviations: -320663946.0
[2025-06-04 09:28:09] 2025-06-04 13:27:49,072 | INFO     | mean x: 1749041565.0
[2025-06-04 09:28:09] 2025-06-04 13:27:49,073 | INFO     | mean y: 2546494.4153846153
[2025-06-04 09:28:09] 2025-06-04 13:27:49,073 | INFO     | -- intersect: 6590258013.037195
[2025-06-04 09:28:09] 2025-06-04 13:27:49,073 | INFO     | intersect: 6590258013.037195
[2025-06-04 09:28:09] 2025-06-04 13:27:49,073 | INFO     | chi2: 0.0013364915236083832
[2025-06-04 09:28:09] 2025-06-04 13:27:49,073 | INFO     | -- intersect: 6590258013.037195
[2025-06-04 09:28:09] 2025-06-04 13:27:49,073 | INFO     | current memory leak: -3.77 B/s (using 65 data points, chi2=0.00)
[2025-06-04 09:28:09] 2025-06-04 13:27:49,073 | INFO     | ..............................
[2025-06-04 09:28:09] 2025-06-04 13:27:49,074 | INFO     | . Timing measurements:
[2025-06-04 09:28:09] 2025-06-04 13:27:49,074 | INFO     | . get job = 0 s
[2025-06-04 09:28:09] 2025-06-04 13:27:49,074 | INFO     | . initial setup = 2 s
[2025-06-04 09:28:09] 2025-06-04 13:27:49,074 | INFO     | . payload setup = 7 s
[2025-06-04 09:28:09] 2025-06-04 13:27:49,074 | INFO     | . stage-in = 0 s
[2025-06-04 09:28:09] 2025-06-04 13:27:49,074 | INFO     | . payload execution = 4352 s
[2025-06-04 09:28:09] 2025-06-04 13:27:49,074 | INFO     | . stage-out = 0 s
[2025-06-04 09:28:09] 2025-06-04 13:27:49,074 | INFO     | . log creation = 0 s
[2025-06-04 09:28:09] 2025-06-04 13:27:49,074 | INFO     | ..............................
[2025-06-04 09:28:09] 2025-06-04 13:27:49,178 | INFO     | 
[2025-06-04 09:28:09] 2025-06-04 13:27:49,178 | INFO     | job summary report
[2025-06-04 09:28:09] 2025-06-04 13:27:49,178 | INFO     | --------------------------------------------------
[2025-06-04 09:28:09] 2025-06-04 13:27:49,178 | INFO     | PanDA job id: 6678392048
[2025-06-04 09:28:09] 2025-06-04 13:27:49,178 | INFO     | task id: 45006595
[2025-06-04 09:28:09] 2025-06-04 13:27:49,179 | INFO     | errors: (none)
[2025-06-04 09:28:09] 2025-06-04 13:27:49,179 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:28:09] 2025-06-04 13:27:49,179 | INFO     | pilot state: finished 
[2025-06-04 09:28:09] 2025-06-04 13:27:49,179 | INFO     | transexitcode: 0
[2025-06-04 09:28:09] 2025-06-04 13:27:49,179 | INFO     | exeerrorcode: 0
[2025-06-04 09:28:09] 2025-06-04 13:27:49,179 | INFO     | exeerrordiag: 
[2025-06-04 09:28:09] 2025-06-04 13:27:49,179 | INFO     | exitcode: 0
[2025-06-04 09:28:09] 2025-06-04 13:27:49,179 | INFO     | exitmsg: OK
[2025-06-04 09:28:09] 2025-06-04 13:27:49,179 | INFO     | cpuconsumptiontime: 32069 s
[2025-06-04 09:28:09] 2025-06-04 13:27:49,179 | INFO     | nevents: 400
[2025-06-04 09:28:09] 2025-06-04 13:27:49,179 | INFO     | neventsw: 0
[2025-06-04 09:28:09] 2025-06-04 13:27:49,179 | INFO     | pid: 176563
[2025-06-04 09:28:09] 2025-06-04 13:27:49,179 | INFO     | pgrp: 176563
[2025-06-04 09:28:09] 2025-06-04 13:27:49,179 | INFO     | corecount: 9
[2025-06-04 09:28:09] 2025-06-04 13:27:49,180 | INFO     | event service: False
[2025-06-04 09:28:09] 2025-06-04 13:27:49,180 | INFO     | sizes: {0: 2397169, 1: 2397368, 5: 2397574, 11: 2397630, 4364: 2423567, 4366: 2432508, 4368: 2432692, 4374: 2432862}
[2025-06-04 09:28:09] 2025-06-04 13:27:49,180 | INFO     | --------------------------------------------------
[2025-06-04 09:28:09] 2025-06-04 13:27:49,180 | INFO     | 
[2025-06-04 09:28:09] 2025-06-04 13:27:49,180 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 09:28:09] 2025-06-04 13:27:49,221 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:28:09] 2025-06-04 13:27:49,221 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:28:09] 2025-06-04 13:27:49,222 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:28:09] 2025-06-04 13:27:49,222 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:28:09] 2025-06-04 13:27:49,222 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:28:09] 2025-06-04 13:27:49,222 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:28:09] 2025-06-04 13:27:49,222 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:28:09] 2025-06-04 13:27:49,222 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:28:09] 2025-06-04 13:27:49,222 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:28:09] 2025-06-04 13:27:49,223 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:28:09] 2025-06-04 13:27:49,223 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:28:09] 2025-06-04 13:27:49,223 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:28:09] 2025-06-04 13:27:49,223 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:28:09] 2025-06-04 13:27:49,223 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:28:09] 2025-06-04 13:27:49,223 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:28:09] 2025-06-04 13:27:49,223 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:28:09] 2025-06-04 13:27:49,223 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:28:09] 2025-06-04 13:27:49,224 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:28:09] 2025-06-04 13:27:49,224 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:28:09] 2025-06-04 13:27:49,224 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:28:09] 2025-06-04 13:27:49,224 | INFO     | job 6678392048 has completed (purged errors)
[2025-06-04 09:28:09] 2025-06-04 13:27:49,224 | INFO     | overall cleanup function is called
[2025-06-04 09:28:09] 2025-06-04 13:27:50,232 | INFO     | --- collectZombieJob: --- 10, [176563]
[2025-06-04 09:28:09] 2025-06-04 13:27:50,232 | INFO     | zombie collector waiting for pid 176563
[2025-06-04 09:28:09] 2025-06-04 13:27:50,232 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:28:09] 2025-06-04 13:27:50,232 | INFO     | collected zombie processes
[2025-06-04 09:28:09] 2025-06-04 13:27:50,233 | INFO     | will attempt to kill all subprocesses of pid=176563
[2025-06-04 09:28:09] 2025-06-04 13:27:50,418 | INFO     | process IDs to be killed: [176563] (in reverse order)
[2025-06-04 09:28:09] 2025-06-04 13:27:50,687 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:28:09] 2025-06-04 13:27:50,687 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:28:09] 2025-06-04 13:27:50,691 | INFO     | did not find any defunct processes belonging to 176563
[2025-06-04 09:28:09] 2025-06-04 13:27:50,694 | INFO     | did not find any defunct processes belonging to 176563
[2025-06-04 09:28:09] 2025-06-04 13:27:50,695 | INFO     | ready for new job
[2025-06-04 09:28:09] 2025-06-04 13:27:50,695 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:28:09] 2025-06-04 13:27:50,696 | INFO     | **************************************
[2025-06-04 09:28:09] 2025-06-04 13:27:50,696 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:28:09] 2025-06-04 13:27:50,696 | INFO     | **************************************
[2025-06-04 09:28:09] 2025-06-04 13:27:50,696 | INFO     | 
[2025-06-04 09:28:09] 2025-06-04 13:27:50,698 | INFO     | architecture information:
[2025-06-04 09:28:09] 2025-06-04 13:27:50,698 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:28:09] 2025-06-04 13:27:50,714 | INFO     | cat /etc/os-release:
[2025-06-04 09:28:09] NAME="CentOS Linux"
[2025-06-04 09:28:09] VERSION="7 (Core)"
[2025-06-04 09:28:09] ID="centos"
[2025-06-04 09:28:09] ID_LIKE="rhel fedora"
[2025-06-04 09:28:09] VERSION_ID="7"
[2025-06-04 09:28:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:28:09] ANSI_COLOR="0;31"
[2025-06-04 09:28:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:28:09] HOME_URL="https://www.centos.org/"
[2025-06-04 09:28:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:28:09] 
[2025-06-04 09:28:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:28:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:28:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:28:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:28:09] 
[2025-06-04 09:28:09] 2025-06-04 13:27:50,714 | INFO     | **************************************
[2025-06-04 09:28:09] 2025-06-04 13:27:51,217 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 09:28:09] 2025-06-04 13:27:51,254 | INFO     | sufficient remaining disk space (56352571392 B)
[2025-06-04 09:28:09] 2025-06-04 13:27:51,254 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:28:09] 2025-06-04 13:27:51,254 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:28:09] 2025-06-04 13:27:51,254 | INFO     | update_server=False
[2025-06-04 09:28:09] 2025-06-04 13:27:51,254 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:28:09] 2025-06-04 13:27:51,255 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:28:09] 2025-06-04 13:27:51,255 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:28:09] 2025-06-04 13:27:51,255 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:28:09] 2025-06-04 13:27:51,259 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:28:09] 2025-06-04 13:27:51,725 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 09:28:09] 2025-06-04 13:27:51,725 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 09:28:09] 2025-06-04 13:27:51,725 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:28:09] 2025-06-04 13:27:51,725 | INFO     | will abort loop
[2025-06-04 09:28:09] 2025-06-04 13:27:51,811 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:28:09] 2025-06-04 13:27:52,018 | INFO     | all payload control threads have been joined
[2025-06-04 09:28:09] 2025-06-04 13:27:52,259 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:28:09] 2025-06-04 13:27:52,308 | INFO     | all data control threads have been joined
[2025-06-04 09:28:09] 2025-06-04 13:27:52,476 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:28:09] 2025-06-04 13:27:52,603 | INFO     | [job] validate thread has finished
[2025-06-04 09:28:09] 2025-06-04 13:27:52,709 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:28:09] 2025-06-04 13:27:52,730 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:28:09] 2025-06-04 13:27:52,766 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:28:09] 2025-06-04 13:27:52,813 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:28:09] 2025-06-04 13:27:52,831 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:28:09] 2025-06-04 13:27:52,954 | INFO     | all job control threads have been joined
[2025-06-04 09:28:09] 2025-06-04 13:27:53,023 | INFO     | [payload] control thread has finished
[2025-06-04 09:28:09] 2025-06-04 13:27:53,309 | INFO     | [data] control thread has finished
[2025-06-04 09:28:09] 2025-06-04 13:27:53,425 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:28:09] 2025-06-04 13:27:53,818 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:28:09] 2025-06-04 13:27:53,888 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:28:09] 2025-06-04 13:27:53,959 | INFO     | [job] control thread has finished
[2025-06-04 09:28:09] 2025-06-04 13:27:54,189 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:28:09] 2025-06-04 13:27:55,195 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:28:09] 2025-06-04 13:27:57,896 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:28:09] 2025-06-04 13:28:01,766 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:28:09] 2025-06-04 13:28:02,771 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:28:09] 2025-06-04 13:28:03,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695197161280)>', '<ExcThread(monitor, started 139694373316352)>']
[2025-06-04 09:28:09] 2025-06-04 13:28:04,326 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:28:09] 2025-06-04 13:28:04,326 | INFO     | [monitor] control thread has ended
[2025-06-04 09:28:09] 2025-06-04 13:28:08,959 | INFO     | all workflow threads have been joined
[2025-06-04 09:28:09] 2025-06-04 13:28:08,960 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:28:09] 2025-06-04 13:28:08,960 | INFO     | traces error code: 0
[2025-06-04 09:28:09] 2025-06-04 13:28:08,960 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:28:09] 2025-06-04 13:28:09,090 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:28:09] 2025-06-04 13:28:09,094 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:28:09] 2025-06-04 13:28:09,098 [wrapper] pilotpid: 169967
[2025-06-04 09:28:09] 2025-06-04 13:28:09,102 [wrapper] Pilot exit status: 0
[2025-06-04 09:28:09] 2025-06-04 13:28:09,116 [wrapper] pandaids: 6678392048
[2025-06-04 09:28:09] 2025-06-04 13:28:09,174 [wrapper] cleanup supervisor_pilot   9615 169968
[2025-06-04 09:28:09] 2025-06-04 13:28:09,179 [wrapper] Test setup, not cleaning
[2025-06-04 09:28:09] 2025-06-04 13:28:09,183 [wrapper] apfmon messages muted
[2025-06-04 09:28:09] 2025-06-04 13:28:09,186 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:28:09] 2025-06-04 13:28:09,189 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:28:09]  *** Error codes and diagnostics ***
[2025-06-04 09:28:09]     "exeErrorCode": 0,
[2025-06-04 09:28:09]     "exeErrorDiag": "",
[2025-06-04 09:28:09]     "pilotErrorCode": 0,
[2025-06-04 09:28:09]     "pilotErrorDiag": "",
[2025-06-04 09:28:09]  *** Listing of results directory ***
[2025-06-04 09:28:09] total 383596
[2025-06-04 09:28:09] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 09:28:09] -rwx------ 1 boincer umatlas     37140 Jun  4 03:38 runpilot2-wrapper.sh
[2025-06-04 09:28:09] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:38 queuedata.json
[2025-06-04 09:28:09] -rw-r--r-- 1 boincer umatlas       100 Jun  4 08:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:28:09] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 08:14 run_atlas
[2025-06-04 09:28:09] -rw-r--r-- 1 boincer umatlas       105 Jun  4 08:14 job.xml
[2025-06-04 09:28:09] -rw-r--r-- 2 boincer umatlas 214627801 Jun  4 08:14 EVNT.45006593._002204.pool.root.1
[2025-06-04 09:28:09] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:14 start_atlas.sh
[2025-06-04 09:28:09] drwxrwx--x 2 boincer umatlas      4096 Jun  4 08:14 shared
[2025-06-04 09:28:09] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 08:14 input.tar.gz
[2025-06-04 09:28:09] -rw-r--r-- 1 boincer umatlas         0 Jun  4 08:14 boinc_lockfile
[2025-06-04 09:28:09] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 08:14 pandaJob.out
[2025-06-04 09:28:09] -rw------- 1 boincer umatlas    986812 Jun  4 08:14 agis_schedconf.cvmfs.json
[2025-06-04 09:28:09] -rw------- 1 boincer umatlas   1598969 Jun  4 08:14 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:28:09] drwx------ 4 boincer umatlas      4096 Jun  4 08:14 pilot3
[2025-06-04 09:28:09] -rw------- 1 boincer umatlas 172870782 Jun  4 09:27 HITS.45006595._055077.pool.root.1
[2025-06-04 09:28:09] -rw-r--r-- 1 boincer umatlas       529 Jun  4 09:27 boinc_task_state.xml
[2025-06-04 09:28:09] -rw------- 1 boincer umatlas        95 Jun  4 09:27 pilot_heartbeat.json
[2025-06-04 09:28:09] -rw------- 1 boincer umatlas      1051 Jun  4 09:27 memory_monitor_summary.json
[2025-06-04 09:28:09] -rw------- 1 boincer umatlas    302581 Jun  4 09:27 log.45006595._055077.job.log.tgz.1
[2025-06-04 09:28:09] -rw------- 1 boincer umatlas      7737 Jun  4 09:27 heartbeat.json
[2025-06-04 09:28:09] -rw-r--r-- 1 boincer umatlas      6354 Jun  4 09:27 init_data.xml
[2025-06-04 09:28:09] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 09:28 boinc_mmap_file
[2025-06-04 09:28:09] -rw-r--r-- 1 boincer umatlas        27 Jun  4 09:28 wrapper_checkpoint.txt
[2025-06-04 09:28:09] -rw------- 1 boincer umatlas      4734 Jun  4 09:28 pilotlog.txt
[2025-06-04 09:28:09] -rw------- 1 boincer umatlas    438021 Jun  4 09:28 log.45006595._055077.job.log.1
[2025-06-04 09:28:09] -rw------- 1 boincer umatlas       357 Jun  4 09:28 output.list
[2025-06-04 09:28:09] -rw-r--r-- 1 boincer umatlas       620 Jun  4 09:28 runtime_log
[2025-06-04 09:28:09] -rw------- 1 boincer umatlas    757760 Jun  4 09:28 result.tar.gz
[2025-06-04 09:28:09] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 09:28 runtime_log.err
[2025-06-04 09:28:09] -rw------- 1 boincer umatlas       659 Jun  4 09:28 9wRKDmRsxg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQwaKDmKn7L4m.diag
[2025-06-04 09:28:09] -rw-r--r-- 1 boincer umatlas     21691 Jun  4 09:28 stderr.txt
[2025-06-04 09:28:09] HITS file was successfully produced:
[2025-06-04 09:28:09] -rw------- 1 boincer umatlas 172870782 Jun  4 09:27 shared/HITS.pool.root.1
[2025-06-04 09:28:09]  *** Contents of shared directory: ***
[2025-06-04 09:28:09] total 379680
[2025-06-04 09:28:09] -rw-r--r-- 2 boincer umatlas 214627801 Jun  4 08:14 ATLAS.root_0
[2025-06-04 09:28:09] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 08:14 start_atlas.sh
[2025-06-04 09:28:09] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 08:14 input.tar.gz
[2025-06-04 09:28:09] -rw------- 1 boincer umatlas 172870782 Jun  4 09:27 HITS.pool.root.1
[2025-06-04 09:28:09] -rw------- 1 boincer umatlas    757760 Jun  4 09:28 result.tar.gz
09:28:11 (166340): run_atlas exited; CPU time 32118.538321
09:28:11 (166340): called boinc_finish(0)

</stderr_txt>
]]>

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