Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:20:20 (2666459): wrapper (7.7.26015): starting
04:20:20 (2666459): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 04:20:20] Arguments: --nthreads 12
[2025-06-05 04:20:20] Threads: 12
[2025-06-05 04:20:20] Checking for CVMFS
[2025-06-05 04:20:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 04:20:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 04:20:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 04:20:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 04:20:21] 2.12.7.0 28267 2842 80504 146806 3 10 3696108 4096001 1824 130560 0 7343447 99.997 708027 167 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 04:20:21] CVMFS is ok
[2025-06-05 04:20:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 04:20:21] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 04:20:21] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 04:20:21] Further information can be found at the LHC@home message board.
[2025-06-05 04:20:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:20:21] Checking for apptainer binary...
[2025-06-05 04:20:21] apptainer is not installed, using version from CVMFS
[2025-06-05 04:20:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:20:21] ryzen7
[2025-06-05 04:20:21] apptainer works
[2025-06-05 04:20:21] Set ATHENA_PROC_NUMBER=12
[2025-06-05 04:20:21] Set ATHENA_CORE_NUMBER=12
[2025-06-05 04:20:21] Starting ATLAS job with PandaID=6678391536
[2025-06-05 04:20:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:36:21]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:36:21] 2025-06-05 05:35:22,598 | INFO     | PID=2670135 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 05:36:21] 2025-06-05 05:35:22,598 | INFO     | .. there are 3 such processes running
[2025-06-05 05:36:21] 2025-06-05 05:35:23,322 | INFO     | monitor loop #335: job 0:6678391536 is in state 'finished'
[2025-06-05 05:36:21] 2025-06-05 05:35:23,322 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:36:21] 2025-06-05 05:35:25,830 | INFO     | monitor loop #336: job 0:6678391536 is in state 'finished'
[2025-06-05 05:36:21] 2025-06-05 05:35:25,830 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:36:21] 2025-06-05 05:35:25,974 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-06-05 05:36:21] 2025-06-05 05:35:28,342 | INFO     | monitor loop #337: job 0:6678391536 is in state 'finished'
[2025-06-05 05:36:21] 2025-06-05 05:35:28,342 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:36:21] 2025-06-05 05:35:30,854 | INFO     | monitor loop #338: job 0:6678391536 is in state 'finished'
[2025-06-05 05:36:21] 2025-06-05 05:35:30,854 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:36:21] 2025-06-05 05:35:33,366 | INFO     | monitor loop #339: job 0:6678391536 is in state 'finished'
[2025-06-05 05:36:21] 2025-06-05 05:35:33,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:36:21] 2025-06-05 05:35:35,878 | INFO     | monitor loop #340: job 0:6678391536 is in state 'finished'
[2025-06-05 05:36:21] 2025-06-05 05:35:35,878 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:36:21] 2025-06-05 05:35:38,390 | INFO     | monitor loop #341: job 0:6678391536 is in state 'finished'
[2025-06-05 05:36:21] 2025-06-05 05:35:38,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:36:21] 2025-06-05 05:35:40,898 | INFO     | monitor loop #342: job 0:6678391536 is in state 'finished'
[2025-06-05 05:36:21] 2025-06-05 05:35:40,898 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:36:21] 2025-06-05 05:35:43,410 | INFO     | monitor loop #343: job 0:6678391536 is in state 'finished'
[2025-06-05 05:36:21] 2025-06-05 05:35:43,410 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:36:21] 2025-06-05 05:35:44,766 | INFO     | PID=2670135 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 05:36:21] 2025-06-05 05:35:44,766 | INFO     | .. there are 3 such processes running
[2025-06-05 05:36:21] 2025-06-05 05:35:45,914 | INFO     | monitor loop #344: job 0:6678391536 is in state 'finished'
[2025-06-05 05:36:21] 2025-06-05 05:35:45,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:36:21] 2025-06-05 05:35:48,418 | INFO     | monitor loop #345: job 0:6678391536 is in state 'finished'
[2025-06-05 05:36:21] 2025-06-05 05:35:48,418 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:36:21] 2025-06-05 05:35:50,926 | INFO     | monitor loop #346: job 0:6678391536 is in state 'finished'
[2025-06-05 05:36:21] 2025-06-05 05:35:50,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:36:21] 2025-06-05 05:35:53,430 | INFO     | monitor loop #347: job 0:6678391536 is in state 'finished'
[2025-06-05 05:36:21] 2025-06-05 05:35:53,430 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:36:21] 2025-06-05 05:35:55,934 | INFO     | monitor loop #348: job 0:6678391536 is in state 'finished'
[2025-06-05 05:36:21] 2025-06-05 05:35:55,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:36:21] 2025-06-05 05:35:58,445 | INFO     | monitor loop #349: job 0:6678391536 is in state 'finished'
[2025-06-05 05:36:21] 2025-06-05 05:35:58,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:36:21] 2025-06-05 05:36:00,958 | INFO     | monitor loop #350: job 0:6678391536 is in state 'finished'
[2025-06-05 05:36:21] 2025-06-05 05:36:00,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:36:21] 2025-06-05 05:36:01,194 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 05:36:21] 2025-06-05 05:36:01,194 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6678391536/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:36:21] 2025-06-05 05:36:01,194 | INFO     | extracted standard info from prmon json
[2025-06-05 05:36:21] 2025-06-05 05:36:01,194 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:36:21] 2025-06-05 05:36:01,195 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:36:21] 2025-06-05 05:36:01,195 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:36:21] 2025-06-05 05:36:01,195 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:36:21] 2025-06-05 05:36:01,196 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:36:21] 2025-06-05 05:36:01,196 | INFO     | sum of square deviations: 89127252.5
[2025-06-05 05:36:21] 2025-06-05 05:36:01,196 | INFO     | sum of deviations: -4344762606.499999
[2025-06-05 05:36:21] 2025-06-05 05:36:01,196 | INFO     | mean x: 1749099537.5
[2025-06-05 05:36:21] 2025-06-05 05:36:01,196 | INFO     | mean y: 2810486.1666666665
[2025-06-05 05:36:21] 2025-06-05 05:36:01,196 | INFO     | -- intersect: 85267665537.9528
[2025-06-05 05:36:21] 2025-06-05 05:36:01,196 | INFO     | intersect: 85267665537.9528
[2025-06-05 05:36:21] 2025-06-05 05:36:01,197 | INFO     | chi2: 0.018055043345128308
[2025-06-05 05:36:21] 2025-06-05 05:36:01,197 | INFO     | -- intersect: 85267665537.9528
[2025-06-05 05:36:21] 2025-06-05 05:36:01,197 | INFO     | current memory leak: -48.75 B/s (using 66 data points, chi2=0.02)
[2025-06-05 05:36:21] 2025-06-05 05:36:01,197 | INFO     | ..............................
[2025-06-05 05:36:21] 2025-06-05 05:36:01,197 | INFO     | . Timing measurements:
[2025-06-05 05:36:21] 2025-06-05 05:36:01,197 | INFO     | . get job = 0 s
[2025-06-05 05:36:21] 2025-06-05 05:36:01,197 | INFO     | . initial setup = 1 s
[2025-06-05 05:36:21] 2025-06-05 05:36:01,197 | INFO     | . payload setup = 3 s
[2025-06-05 05:36:21] 2025-06-05 05:36:01,197 | INFO     | . stage-in = 0 s
[2025-06-05 05:36:21] 2025-06-05 05:36:01,197 | INFO     | . payload execution = 4456 s
[2025-06-05 05:36:21] 2025-06-05 05:36:01,197 | INFO     | . stage-out = 0 s
[2025-06-05 05:36:21] 2025-06-05 05:36:01,197 | INFO     | . log creation = 0 s
[2025-06-05 05:36:21] 2025-06-05 05:36:01,197 | INFO     | ..............................
[2025-06-05 05:36:21] 2025-06-05 05:36:01,450 | INFO     | 
[2025-06-05 05:36:21] 2025-06-05 05:36:01,450 | INFO     | job summary report
[2025-06-05 05:36:21] 2025-06-05 05:36:01,450 | INFO     | --------------------------------------------------
[2025-06-05 05:36:21] 2025-06-05 05:36:01,450 | INFO     | PanDA job id: 6678391536
[2025-06-05 05:36:21] 2025-06-05 05:36:01,450 | INFO     | task id: 45006595
[2025-06-05 05:36:21] 2025-06-05 05:36:01,450 | INFO     | errors: (none)
[2025-06-05 05:36:21] 2025-06-05 05:36:01,450 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:36:21] 2025-06-05 05:36:01,450 | INFO     | pilot state: finished 
[2025-06-05 05:36:21] 2025-06-05 05:36:01,450 | INFO     | transexitcode: 0
[2025-06-05 05:36:21] 2025-06-05 05:36:01,450 | INFO     | exeerrorcode: 0
[2025-06-05 05:36:21] 2025-06-05 05:36:01,450 | INFO     | exeerrordiag: 
[2025-06-05 05:36:21] 2025-06-05 05:36:01,450 | INFO     | exitcode: 0
[2025-06-05 05:36:21] 2025-06-05 05:36:01,450 | INFO     | exitmsg: OK
[2025-06-05 05:36:21] 2025-06-05 05:36:01,451 | INFO     | cpuconsumptiontime: 21636 s
[2025-06-05 05:36:21] 2025-06-05 05:36:01,451 | INFO     | nevents: 400
[2025-06-05 05:36:21] 2025-06-05 05:36:01,451 | INFO     | neventsw: 0
[2025-06-05 05:36:21] 2025-06-05 05:36:01,451 | INFO     | pid: 2676713
[2025-06-05 05:36:21] 2025-06-05 05:36:01,451 | INFO     | pgrp: 2676713
[2025-06-05 05:36:21] 2025-06-05 05:36:01,451 | INFO     | corecount: 12
[2025-06-05 05:36:21] 2025-06-05 05:36:01,451 | INFO     | event service: False
[2025-06-05 05:36:21] 2025-06-05 05:36:01,451 | INFO     | sizes: {0: 2397365, 3: 2397571, 11: 2397599, 4464: 2423666, 4465: 2432653, 4468: 2432709, 4521: 2433007}
[2025-06-05 05:36:21] 2025-06-05 05:36:01,451 | INFO     | --------------------------------------------------
[2025-06-05 05:36:21] 2025-06-05 05:36:01,451 | INFO     | 
[2025-06-05 05:36:21] 2025-06-05 05:36:01,451 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-05 05:36:21] 2025-06-05 05:36:01,482 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:36:21] 2025-06-05 05:36:01,482 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:36:21] 2025-06-05 05:36:01,482 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:36:21] 2025-06-05 05:36:01,482 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:36:21] 2025-06-05 05:36:01,482 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:36:21] 2025-06-05 05:36:01,482 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:36:21] 2025-06-05 05:36:01,482 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:36:21] 2025-06-05 05:36:01,482 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:36:21] 2025-06-05 05:36:01,482 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:36:21] 2025-06-05 05:36:01,483 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:36:21] 2025-06-05 05:36:01,483 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:36:21] 2025-06-05 05:36:01,483 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:36:21] 2025-06-05 05:36:01,483 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:36:21] 2025-06-05 05:36:01,483 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:36:21] 2025-06-05 05:36:01,483 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:36:21] 2025-06-05 05:36:01,483 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:36:21] 2025-06-05 05:36:01,483 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:36:21] 2025-06-05 05:36:01,483 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:36:21] 2025-06-05 05:36:01,483 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:36:21] 2025-06-05 05:36:01,483 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:36:21] 2025-06-05 05:36:01,483 | INFO     | job 6678391536 has completed (purged errors)
[2025-06-05 05:36:21] 2025-06-05 05:36:01,483 | INFO     | overall cleanup function is called
[2025-06-05 05:36:21] 2025-06-05 05:36:02,490 | INFO     | --- collectZombieJob: --- 10, [2676713]
[2025-06-05 05:36:21] 2025-06-05 05:36:02,490 | INFO     | zombie collector waiting for pid 2676713
[2025-06-05 05:36:21] 2025-06-05 05:36:02,490 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:36:21] 2025-06-05 05:36:02,490 | INFO     | collected zombie processes
[2025-06-05 05:36:21] 2025-06-05 05:36:02,490 | INFO     | will attempt to kill all subprocesses of pid=2676713
[2025-06-05 05:36:21] 2025-06-05 05:36:02,565 | INFO     | process IDs to be killed: [2676713] (in reverse order)
[2025-06-05 05:36:21] 2025-06-05 05:36:02,655 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:36:21] 2025-06-05 05:36:02,655 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:36:21] 2025-06-05 05:36:02,657 | INFO     | did not find any defunct processes belonging to 2676713
[2025-06-05 05:36:21] 2025-06-05 05:36:02,662 | INFO     | did not find any defunct processes belonging to 2676713
[2025-06-05 05:36:21] 2025-06-05 05:36:02,662 | INFO     | ready for new job
[2025-06-05 05:36:21] 2025-06-05 05:36:02,662 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:36:21] 2025-06-05 05:36:02,663 | INFO     | **************************************
[2025-06-05 05:36:21] 2025-06-05 05:36:02,663 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:36:21] 2025-06-05 05:36:02,663 | INFO     | **************************************
[2025-06-05 05:36:21] 2025-06-05 05:36:02,663 | INFO     | 
[2025-06-05 05:36:21] 2025-06-05 05:36:02,664 | INFO     | architecture information:
[2025-06-05 05:36:21] 2025-06-05 05:36:02,664 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:36:21] 2025-06-05 05:36:02,672 | INFO     | cat /etc/os-release:
[2025-06-05 05:36:21] NAME="CentOS Linux"
[2025-06-05 05:36:21] VERSION="7 (Core)"
[2025-06-05 05:36:21] ID="centos"
[2025-06-05 05:36:21] ID_LIKE="rhel fedora"
[2025-06-05 05:36:21] VERSION_ID="7"
[2025-06-05 05:36:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:36:21] ANSI_COLOR="0;31"
[2025-06-05 05:36:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:36:21] HOME_URL="https://www.centos.org/"
[2025-06-05 05:36:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:36:21] 
[2025-06-05 05:36:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:36:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:36:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:36:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:36:21] 
[2025-06-05 05:36:21] 2025-06-05 05:36:02,672 | INFO     | **************************************
[2025-06-05 05:36:21] 2025-06-05 05:36:03,174 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-05 05:36:21] 2025-06-05 05:36:03,183 | INFO     | sufficient remaining disk space (183968464896 B)
[2025-06-05 05:36:21] 2025-06-05 05:36:03,183 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:36:21] 2025-06-05 05:36:03,183 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:36:21] 2025-06-05 05:36:03,183 | INFO     | update_server=False
[2025-06-05 05:36:21] 2025-06-05 05:36:03,183 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:36:21] 2025-06-05 05:36:03,183 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:36:21] 2025-06-05 05:36:03,184 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 05:36:21] 2025-06-05 05:36:03,184 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:36:21] 2025-06-05 05:36:03,184 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:36:21] 2025-06-05 05:36:03,184 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:36:21] 2025-06-05 05:36:03,204 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:36:21] 2025-06-05 05:36:03,464 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 05:36:21] 2025-06-05 05:36:03,465 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 05:36:21] 2025-06-05 05:36:03,465 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:36:21] 2025-06-05 05:36:03,465 | INFO     | will abort loop
[2025-06-05 05:36:21] 2025-06-05 05:36:03,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:36:21] 2025-06-05 05:36:03,849 | INFO     | all data control threads have been joined
[2025-06-05 05:36:21] 2025-06-05 05:36:04,072 | INFO     | all payload control threads have been joined
[2025-06-05 05:36:21] 2025-06-05 05:36:04,189 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:36:21] 2025-06-05 05:36:04,189 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:36:21] 2025-06-05 05:36:04,290 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:36:21] 2025-06-05 05:36:04,381 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:36:21] 2025-06-05 05:36:04,398 | INFO     | all job control threads have been joined
[2025-06-05 05:36:21] 2025-06-05 05:36:04,470 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:36:21] 2025-06-05 05:36:04,618 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:36:21] 2025-06-05 05:36:04,858 | INFO     | [data] control thread has finished
[2025-06-05 05:36:21] 2025-06-05 05:36:04,886 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:36:21] 2025-06-05 05:36:04,994 | INFO     | [job] validate thread has finished
[2025-06-05 05:36:21] 2025-06-05 05:36:05,074 | INFO     | [payload] control thread has finished
[2025-06-05 05:36:21] 2025-06-05 05:36:05,102 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:36:21] 2025-06-05 05:36:05,206 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:36:21] 2025-06-05 05:36:05,303 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:36:21] 2025-06-05 05:36:05,403 | INFO     | [job] control thread has finished
[2025-06-05 05:36:21] 2025-06-05 05:36:07,602 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:36:21] 2025-06-05 05:36:14,078 | INFO     | job.realtimelogging is not enabled
[2025-06-05 05:36:21] 2025-06-05 05:36:15,082 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:36:21] 2025-06-05 05:36:15,914 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140402284050240)>', '<ExcThread(monitor, started 140401834960640)>']
[2025-06-05 05:36:21] 2025-06-05 05:36:16,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:36:21] 2025-06-05 05:36:16,278 | INFO     | [monitor] control thread has ended
[2025-06-05 05:36:21] 2025-06-05 05:36:20,942 | INFO     | all workflow threads have been joined
[2025-06-05 05:36:21] 2025-06-05 05:36:20,942 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:36:21] 2025-06-05 05:36:20,942 | INFO     | traces error code: 0
[2025-06-05 05:36:21] 2025-06-05 05:36:20,942 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:36:21] 2025-06-05 05:36:21,026 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:36:21] 2025-06-05 05:36:21,078 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:36:21] 2025-06-05 05:36:21,097 [wrapper] pilotpid: 2670135
[2025-06-05 05:36:21] 2025-06-05 05:36:21,138 [wrapper] Pilot exit status: 0
[2025-06-05 05:36:21] 2025-06-05 05:36:21,237 [wrapper] pandaids: 6678391536
[2025-06-05 05:36:21] 2025-06-05 05:36:21,259 [wrapper] cleanup supervisor_pilot 2735851 2670136
[2025-06-05 05:36:21] 2025-06-05 05:36:21,260 [wrapper] Test setup, not cleaning
[2025-06-05 05:36:21] 2025-06-05 05:36:21,262 [wrapper] apfmon messages muted
[2025-06-05 05:36:21] 2025-06-05 05:36:21,266 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:36:21] 2025-06-05 05:36:21,271 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:36:21]  *** Error codes and diagnostics ***
[2025-06-05 05:36:21]     "exeErrorCode": 0,
[2025-06-05 05:36:21]     "exeErrorDiag": "",
[2025-06-05 05:36:21]     "pilotErrorCode": 0,
[2025-06-05 05:36:21]     "pilotErrorDiag": "",
[2025-06-05 05:36:21]  *** Listing of results directory ***
[2025-06-05 05:36:21] total 393624
[2025-06-05 05:36:21] -rw-r--r-- 1 boinc boinc    495897 Jun  4 07:04 pilot3.tar.gz
[2025-06-05 05:36:21] -rw-r--r-- 1 boinc boinc      5111 Jun  4 07:29 queuedata.json
[2025-06-05 05:36:21] -rwx------ 1 boinc boinc     37140 Jun  4 07:29 runpilot2-wrapper.sh
[2025-06-05 05:36:21] -rw-rw-r-- 1 boinc boinc       100 Jun  5 04:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:36:21] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 04:20 run_atlas
[2025-06-05 05:36:21] -rw-rw-r-- 1 boinc boinc       105 Jun  5 04:20 job.xml
[2025-06-05 05:36:21] -rw-r--r-- 2 boinc boinc     15093 Jun  5 04:20 start_atlas.sh
[2025-06-05 05:36:21] drwxrwx--x 2 boinc boinc      4096 Jun  5 04:20 shared
[2025-06-05 05:36:21] -rw-r--r-- 2 boinc boinc    508883 Jun  5 04:20 input.tar.gz
[2025-06-05 05:36:21] -rw-rw-r-- 1 boinc boinc      9704 Jun  5 04:20 init_data.xml
[2025-06-05 05:36:21] -rw-r--r-- 2 boinc boinc 215212369 Jun  5 04:20 EVNT.45006593._002196.pool.root.1
[2025-06-05 05:36:21] -rw-rw-r-- 1 boinc boinc         0 Jun  5 04:20 boinc_lockfile
[2025-06-05 05:36:21] -rw-rw-r-- 1 boinc boinc      2525 Jun  5 04:20 pandaJob.out
[2025-06-05 05:36:21] -rw------- 1 boinc boinc    987109 Jun  5 04:20 agis_schedconf.cvmfs.json
[2025-06-05 05:36:21] -rw------- 1 boinc boinc   1598969 Jun  5 04:20 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:36:21] drwx------ 4 boinc boinc      4096 Jun  5 04:20 pilot3
[2025-06-05 05:36:21] -rw------- 1 boinc boinc 182352543 Jun  5 05:34 HITS.45006595._054898.pool.root.1
[2025-06-05 05:36:21] -rw-rw-r-- 1 boinc boinc       529 Jun  5 05:34 boinc_task_state.xml
[2025-06-05 05:36:21] -rw------- 1 boinc boinc      1017 Jun  5 05:35 memory_monitor_summary.json
[2025-06-05 05:36:21] -rw------- 1 boinc boinc    374161 Jun  5 05:35 log.45006595._054898.job.log.tgz.1
[2025-06-05 05:36:21] -rw------- 1 boinc boinc        95 Jun  5 05:35 pilot_heartbeat.json
[2025-06-05 05:36:21] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 05:35 boinc_mmap_file
[2025-06-05 05:36:21] -rw-rw-r-- 1 boinc boinc        27 Jun  5 05:35 wrapper_checkpoint.txt
[2025-06-05 05:36:21] -rw------- 1 boinc boinc      7652 Jun  5 05:36 heartbeat.json
[2025-06-05 05:36:21] -rw------- 1 boinc boinc      4758 Jun  5 05:36 pilotlog.txt
[2025-06-05 05:36:21] -rw------- 1 boinc boinc    460868 Jun  5 05:36 log.45006595._054898.job.log.1
[2025-06-05 05:36:21] -rw------- 1 boinc boinc       357 Jun  5 05:36 output.list
[2025-06-05 05:36:21] -rw-rw-r-- 1 boinc boinc       620 Jun  5 05:36 runtime_log
[2025-06-05 05:36:21] -rw------- 1 boinc boinc    849920 Jun  5 05:36 result.tar.gz
[2025-06-05 05:36:21] -rw------- 1 boinc boinc       649 Jun  5 05:36 V0CLDmSkxg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmkuaKDmdczLOo.diag
[2025-06-05 05:36:21] -rw-rw-r-- 1 boinc boinc      8953 Jun  5 05:36 runtime_log.err
[2025-06-05 05:36:21] -rw-rw-r-- 1 boinc boinc     22513 Jun  5 05:36 stderr.txt
[2025-06-05 05:36:21] HITS file was successfully produced:
[2025-06-05 05:36:21] -rw------- 1 boinc boinc 182352543 Jun  5 05:34 shared/HITS.pool.root.1
[2025-06-05 05:36:21]  *** Contents of shared directory: ***
[2025-06-05 05:36:21] total 389608
[2025-06-05 05:36:21] -rw-r--r-- 2 boinc boinc     15093 Jun  5 04:20 start_atlas.sh
[2025-06-05 05:36:21] -rw-r--r-- 2 boinc boinc    508883 Jun  5 04:20 input.tar.gz
[2025-06-05 05:36:21] -rw-r--r-- 2 boinc boinc 215212369 Jun  5 04:20 ATLAS.root_0
[2025-06-05 05:36:21] -rw------- 1 boinc boinc 182352543 Jun  5 05:34 HITS.pool.root.1
[2025-06-05 05:36:21] -rw------- 1 boinc boinc    849920 Jun  5 05:36 result.tar.gz
05:36:23 (2666459): run_atlas exited; CPU time 21653.486043
05:36:23 (2666459): called boinc_finish(0)

</stderr_txt>
]]>

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