Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:57:27 (1091): wrapper (7.7.26015): starting
07:57:27 (1091): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 07:57:27] Arguments: --nthreads 12
[2025-06-04 07:57:27] Threads: 12
[2025-06-04 07:57:27] Checking for CVMFS
[2025-06-04 07:57:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:57:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:57:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:57:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:57:28] 2.11.2.0 2979 35651 92536 146779 0 56 18950545 20275201 1 130560 0 15879049 99.983 6183521 7495 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 07:57:28] CVMFS is ok
[2025-06-04 07:57:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:57:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:57:28] Further information can be found at the LHC@home message board.
[2025-06-04 07:57:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:57:28] Checking for apptainer binary...
[2025-06-04 07:57:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:57:28] Running /usr/bin/apptainer --version
[2025-06-04 07:57:28] apptainer version 1.3.2-1.el7
[2025-06-04 07:57:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:57:29] c-205-7.aglt2.org
[2025-06-04 07:57:29] apptainer works
[2025-06-04 07:57:29] Set ATHENA_PROC_NUMBER=12
[2025-06-04 07:57:29] Set ATHENA_CORE_NUMBER=12
[2025-06-04 07:57:29] Starting ATLAS job with PandaID=6678391467
[2025-06-04 07:57:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:58:50]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:58:50]  is_tar=False
[2025-06-04 08:58:50]  lfn=log.45006595._054829.job.log.tgz.1
[2025-06-04 08:58:50]  mtime=0
[2025-06-04 08:58:50]  protocol_id=None
[2025-06-04 08:58:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:58:50]  replicas=None
[2025-06-04 08:58:50]  scope=mc23_13p6TeV
[2025-06-04 08:58:50]  status=None
[2025-06-04 08:58:50]  status_code=0
[2025-06-04 08:58:50]  storage_token=
[2025-06-04 08:58:50]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678391467/log.45006595._054829.job.log.tgz.1
[2025-06-04 08:58:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/51/log.45006595._054829.job.log.tgz.1
[2025-06-04 08:58:50]  workdir=None
[2025-06-04 08:58:50] ]
[2025-06-04 08:58:50] 2025-06-04 12:58:26,594 | INFO     | transferring file log.45006595._054829.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678391467/log.45006595._054829.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:58:50] 2025-06-04 12:58:26,594 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678391467/log.45006595._054829.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._054829.job
[2025-06-04 08:58:50] 2025-06-04 12:58:26,616 | INFO     | adding to output.list: log.45006595._054829.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/51/log.45006595._054829.job.log.tg
[2025-06-04 08:58:50] 2025-06-04 12:58:26,617 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:58:50] 2025-06-04 12:58:26,617 | INFO     | summary of transferred files:
[2025-06-04 08:58:50] 2025-06-04 12:58:26,617 | INFO     |  -- lfn=log.45006595._054829.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:58:50] 2025-06-04 12:58:26,618 | INFO     | stage-out finished correctly
[2025-06-04 08:58:50] 2025-06-04 12:58:27,305 | INFO     | monitor loop #275: job 0:6678391467 is in state 'finished'
[2025-06-04 08:58:50] 2025-06-04 12:58:27,306 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:58:50] 2025-06-04 12:58:28,850 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:58:50] 2025-06-04 12:58:29,809 | INFO     | monitor loop #276: job 0:6678391467 is in state 'finished'
[2025-06-04 08:58:50] 2025-06-04 12:58:29,809 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:58:50] 2025-06-04 12:58:31,125 | INFO     | job 6678391467 has state=finished
[2025-06-04 08:58:50] 2025-06-04 12:58:31,126 | INFO     | preparing for final server update for job 6678391467 in state='finished'
[2025-06-04 08:58:50] 2025-06-04 12:58:31,126 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:58:50] 2025-06-04 12:58:31,126 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:58:50] 2025-06-04 12:58:31,126 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:58:50] 2025-06-04 12:58:31,127 | INFO     | job 6678391467 has finished - writing final server update
[2025-06-04 08:58:50] 2025-06-04 12:58:31,127 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:58:50] 2025-06-04 12:58:31,128 | INFO     | executing command: lscpu
[2025-06-04 08:58:50] 2025-06-04 12:58:31,155 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:58:50] 2025-06-04 12:58:32,312 | INFO     | monitor loop #277: job 0:6678391467 is in state 'finished'
[2025-06-04 08:58:50] 2025-06-04 12:58:32,312 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:58:50] 2025-06-04 12:58:33,628 | INFO     | 3653s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 08:58:50] 2025-06-04 12:58:34,815 | INFO     | monitor loop #278: job 0:6678391467 is in state 'finished'
[2025-06-04 08:58:50] 2025-06-04 12:58:34,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:58:50] 2025-06-04 12:58:35,915 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 08:58:50] 2025-06-04 12:58:35,915 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678391467/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:58:50] 2025-06-04 12:58:35,917 | INFO     | extracted standard info from prmon json
[2025-06-04 08:58:50] 2025-06-04 12:58:35,917 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:58:50] 2025-06-04 12:58:35,917 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:58:50] 2025-06-04 12:58:35,917 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:58:50] 2025-06-04 12:58:35,917 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:58:50] 2025-06-04 12:58:35,919 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:58:50] 2025-06-04 12:58:35,919 | INFO     | sum of square deviations: 46147842.0
[2025-06-04 08:58:50] 2025-06-04 12:58:35,920 | INFO     | sum of deviations: -4468913924.0
[2025-06-04 08:58:50] 2025-06-04 12:58:35,920 | INFO     | mean x: 1749040184.0
[2025-06-04 08:58:50] 2025-06-04 12:58:35,920 | INFO     | mean y: 2726813.452830189
[2025-06-04 08:58:50] 2025-06-04 12:58:35,920 | INFO     | -- intersect: 169378144886.37424
[2025-06-04 08:58:50] 2025-06-04 12:58:35,920 | INFO     | intersect: 169378144886.37424
[2025-06-04 08:58:50] 2025-06-04 12:58:35,921 | INFO     | chi2: 0.046561062369121525
[2025-06-04 08:58:50] 2025-06-04 12:58:35,921 | INFO     | -- intersect: 169378144886.37424
[2025-06-04 08:58:50] 2025-06-04 12:58:35,921 | INFO     | current memory leak: -96.84 B/s (using 53 data points, chi2=0.05)
[2025-06-04 08:58:50] 2025-06-04 12:58:35,921 | INFO     | ..............................
[2025-06-04 08:58:50] 2025-06-04 12:58:35,922 | INFO     | . Timing measurements:
[2025-06-04 08:58:50] 2025-06-04 12:58:35,922 | INFO     | . get job = 0 s
[2025-06-04 08:58:50] 2025-06-04 12:58:35,922 | INFO     | . initial setup = 2 s
[2025-06-04 08:58:50] 2025-06-04 12:58:35,922 | INFO     | . payload setup = 9 s
[2025-06-04 08:58:50] 2025-06-04 12:58:35,922 | INFO     | . stage-in = 0 s
[2025-06-04 08:58:50] 2025-06-04 12:58:35,922 | INFO     | . payload execution = 3613 s
[2025-06-04 08:58:50] 2025-06-04 12:58:35,922 | INFO     | . stage-out = 0 s
[2025-06-04 08:58:50] 2025-06-04 12:58:35,923 | INFO     | . log creation = 0 s
[2025-06-04 08:58:50] 2025-06-04 12:58:35,923 | INFO     | ..............................
[2025-06-04 08:58:50] 2025-06-04 12:58:36,008 | INFO     | 
[2025-06-04 08:58:50] 2025-06-04 12:58:36,008 | INFO     | job summary report
[2025-06-04 08:58:50] 2025-06-04 12:58:36,008 | INFO     | --------------------------------------------------
[2025-06-04 08:58:50] 2025-06-04 12:58:36,008 | INFO     | PanDA job id: 6678391467
[2025-06-04 08:58:50] 2025-06-04 12:58:36,009 | INFO     | task id: 45006595
[2025-06-04 08:58:50] 2025-06-04 12:58:36,009 | INFO     | errors: (none)
[2025-06-04 08:58:50] 2025-06-04 12:58:36,009 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:58:50] 2025-06-04 12:58:36,009 | INFO     | pilot state: finished 
[2025-06-04 08:58:50] 2025-06-04 12:58:36,009 | INFO     | transexitcode: 0
[2025-06-04 08:58:50] 2025-06-04 12:58:36,009 | INFO     | exeerrorcode: 0
[2025-06-04 08:58:50] 2025-06-04 12:58:36,009 | INFO     | exeerrordiag: 
[2025-06-04 08:58:50] 2025-06-04 12:58:36,010 | INFO     | exitcode: 0
[2025-06-04 08:58:50] 2025-06-04 12:58:36,010 | INFO     | exitmsg: OK
[2025-06-04 08:58:50] 2025-06-04 12:58:36,010 | INFO     | cpuconsumptiontime: 39057 s
[2025-06-04 08:58:50] 2025-06-04 12:58:36,010 | INFO     | nevents: 400
[2025-06-04 08:58:50] 2025-06-04 12:58:36,010 | INFO     | neventsw: 0
[2025-06-04 08:58:50] 2025-06-04 12:58:36,010 | INFO     | pid: 11331
[2025-06-04 08:58:50] 2025-06-04 12:58:36,011 | INFO     | pgrp: 11331
[2025-06-04 08:58:50] 2025-06-04 12:58:36,011 | INFO     | corecount: 12
[2025-06-04 08:58:50] 2025-06-04 12:58:36,011 | INFO     | event service: False
[2025-06-04 08:58:50] 2025-06-04 12:58:36,011 | INFO     | sizes: {0: 2397171, 1: 2397370, 5: 2397576, 11: 2397632, 3626: 2423200, 3627: 2423199, 3628: 2432324, 3630: 2432380, 3637: 2432550}
[2025-06-04 08:58:50] 2025-06-04 12:58:36,011 | INFO     | --------------------------------------------------
[2025-06-04 08:58:50] 2025-06-04 12:58:36,011 | INFO     | 
[2025-06-04 08:58:50] 2025-06-04 12:58:36,012 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:58:50] 2025-06-04 12:58:36,036 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:58:50] 2025-06-04 12:58:36,036 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:58:50] 2025-06-04 12:58:36,036 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:58:50] 2025-06-04 12:58:36,036 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:58:50] 2025-06-04 12:58:36,037 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:58:50] 2025-06-04 12:58:36,037 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:58:50] 2025-06-04 12:58:36,037 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:58:50] 2025-06-04 12:58:36,037 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:58:50] 2025-06-04 12:58:36,037 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:58:50] 2025-06-04 12:58:36,037 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:58:50] 2025-06-04 12:58:36,038 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:58:50] 2025-06-04 12:58:36,038 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:58:50] 2025-06-04 12:58:36,038 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:58:50] 2025-06-04 12:58:36,038 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:58:50] 2025-06-04 12:58:36,038 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:58:50] 2025-06-04 12:58:36,038 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:58:50] 2025-06-04 12:58:36,039 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:58:50] 2025-06-04 12:58:36,039 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:58:50] 2025-06-04 12:58:36,039 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:58:50] 2025-06-04 12:58:36,039 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:58:50] 2025-06-04 12:58:36,039 | INFO     | job 6678391467 has completed (purged errors)
[2025-06-04 08:58:50] 2025-06-04 12:58:36,040 | INFO     | overall cleanup function is called
[2025-06-04 08:58:50] 2025-06-04 12:58:37,046 | INFO     | --- collectZombieJob: --- 10, [11331]
[2025-06-04 08:58:50] 2025-06-04 12:58:37,046 | INFO     | zombie collector waiting for pid 11331
[2025-06-04 08:58:50] 2025-06-04 12:58:37,046 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:58:50] 2025-06-04 12:58:37,046 | INFO     | collected zombie processes
[2025-06-04 08:58:50] 2025-06-04 12:58:37,046 | INFO     | will attempt to kill all subprocesses of pid=11331
[2025-06-04 08:58:50] 2025-06-04 12:58:37,138 | INFO     | process IDs to be killed: [11331] (in reverse order)
[2025-06-04 08:58:50] 2025-06-04 12:58:37,192 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:58:50] 2025-06-04 12:58:37,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:58:50] 2025-06-04 12:58:37,196 | INFO     | did not find any defunct processes belonging to 11331
[2025-06-04 08:58:50] 2025-06-04 12:58:37,199 | INFO     | did not find any defunct processes belonging to 11331
[2025-06-04 08:58:50] 2025-06-04 12:58:37,199 | INFO     | ready for new job
[2025-06-04 08:58:50] 2025-06-04 12:58:37,199 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:58:50] 2025-06-04 12:58:37,200 | INFO     | **************************************
[2025-06-04 08:58:50] 2025-06-04 12:58:37,201 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:58:50] 2025-06-04 12:58:37,201 | INFO     | **************************************
[2025-06-04 08:58:50] 2025-06-04 12:58:37,201 | INFO     | 
[2025-06-04 08:58:50] 2025-06-04 12:58:37,202 | INFO     | architecture information:
[2025-06-04 08:58:50] 2025-06-04 12:58:37,202 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:58:50] 2025-06-04 12:58:37,216 | INFO     | cat /etc/os-release:
[2025-06-04 08:58:50] NAME="CentOS Linux"
[2025-06-04 08:58:50] VERSION="7 (Core)"
[2025-06-04 08:58:50] ID="centos"
[2025-06-04 08:58:50] ID_LIKE="rhel fedora"
[2025-06-04 08:58:50] VERSION_ID="7"
[2025-06-04 08:58:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:58:50] ANSI_COLOR="0;31"
[2025-06-04 08:58:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:58:50] HOME_URL="https://www.centos.org/"
[2025-06-04 08:58:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:58:50] 
[2025-06-04 08:58:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:58:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:58:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:58:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:58:50] 
[2025-06-04 08:58:50] 2025-06-04 12:58:37,217 | INFO     | **************************************
[2025-06-04 08:58:50] 2025-06-04 12:58:37,720 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:58:50] 2025-06-04 12:58:37,737 | INFO     | sufficient remaining disk space (29426188288 B)
[2025-06-04 08:58:50] 2025-06-04 12:58:37,738 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:58:50] 2025-06-04 12:58:37,738 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:58:50] 2025-06-04 12:58:37,738 | INFO     | update_server=False
[2025-06-04 08:58:50] 2025-06-04 12:58:37,738 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:58:50] 2025-06-04 12:58:37,738 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:58:50] 2025-06-04 12:58:37,739 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:58:50] 2025-06-04 12:58:37,790 | INFO     | all data control threads have been joined
[2025-06-04 08:58:50] 2025-06-04 12:58:38,322 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:58:50] 2025-06-04 12:58:38,322 | INFO     | aborting loop
[2025-06-04 08:58:50] 2025-06-04 12:58:38,484 | INFO     | all payload control threads have been joined
[2025-06-04 08:58:50] 2025-06-04 12:58:38,744 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:58:50] 2025-06-04 12:58:38,744 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:58:50] 2025-06-04 12:58:38,757 | INFO     | PID=4872 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 08:58:50] 2025-06-04 12:58:38,758 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:58:50] 2025-06-04 12:58:38,758 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:58:50] 2025-06-04 12:58:38,758 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:58:50] 2025-06-04 12:58:38,796 | INFO     | [data] control thread has finished
[2025-06-04 08:58:50] 2025-06-04 12:58:38,921 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:58:50] 2025-06-04 12:58:38,928 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:58:50] 2025-06-04 12:58:39,193 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:58:50] 2025-06-04 12:58:39,271 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:58:50] 2025-06-04 12:58:39,288 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:58:50] 2025-06-04 12:58:39,314 | INFO     | all job control threads have been joined
[2025-06-04 08:58:50] 2025-06-04 12:58:39,324 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:58:50] 2025-06-04 12:58:39,447 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:58:50] 2025-06-04 12:58:39,485 | INFO     | [payload] control thread has finished
[2025-06-04 08:58:50] 2025-06-04 12:58:39,744 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:58:50] 2025-06-04 12:58:39,914 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:58:50] 2025-06-04 12:58:39,944 | INFO     | [job] validate thread has finished
[2025-06-04 08:58:50] 2025-06-04 12:58:40,319 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:58:50] 2025-06-04 12:58:40,320 | INFO     | [job] control thread has finished
[2025-06-04 08:58:50] 2025-06-04 12:58:43,452 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:58:50] 2025-06-04 12:58:45,383 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140068092835648)>', '<ExcThread(monitor, started 140067070801664)>']
[2025-06-04 08:58:50] 2025-06-04 12:58:45,789 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:58:50] 2025-06-04 12:58:45,789 | INFO     | [monitor] control thread has ended
[2025-06-04 08:58:50] 2025-06-04 12:58:50,385 | INFO     | all workflow threads have been joined
[2025-06-04 08:58:50] 2025-06-04 12:58:50,385 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:58:50] 2025-06-04 12:58:50,385 | INFO     | traces error code: 0
[2025-06-04 08:58:50] 2025-06-04 12:58:50,386 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:58:50] 2025-06-04 12:58:50,473 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:58:50] 2025-06-04 12:58:50,477 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:58:50] 2025-06-04 12:58:50,481 [wrapper] pilotpid: 4872
[2025-06-04 08:58:50] 2025-06-04 12:58:50,484 [wrapper] Pilot exit status: 0
[2025-06-04 08:58:50] 2025-06-04 12:58:50,499 [wrapper] pandaids: 6678391467
[2025-06-04 08:58:50] 2025-06-04 12:58:50,539 [wrapper] cleanup supervisor_pilot 17526 4873
[2025-06-04 08:58:50] 2025-06-04 12:58:50,543 [wrapper] Test setup, not cleaning
[2025-06-04 08:58:50] 2025-06-04 12:58:50,547 [wrapper] apfmon messages muted
[2025-06-04 08:58:50] 2025-06-04 12:58:50,551 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:58:50] 2025-06-04 12:58:50,555 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:58:50]  *** Error codes and diagnostics ***
[2025-06-04 08:58:50]     "exeErrorCode": 0,
[2025-06-04 08:58:50]     "exeErrorDiag": "",
[2025-06-04 08:58:50]     "pilotErrorCode": 0,
[2025-06-04 08:58:50]     "pilotErrorDiag": "",
[2025-06-04 08:58:50]  *** Listing of results directory ***
[2025-06-04 08:58:50] total 382984
[2025-06-04 08:58:50] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:04 pilot3.tar.gz
[2025-06-04 08:58:50] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:29 queuedata.json
[2025-06-04 08:58:50] -rwx------ 1 boincer umatlas     37140 Jun  4 03:30 runpilot2-wrapper.sh
[2025-06-04 08:58:50] -rw-r--r-- 1 boincer umatlas       100 Jun  4 07:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:58:50] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 07:57 run_atlas
[2025-06-04 08:58:50] -rw-r--r-- 1 boincer umatlas       105 Jun  4 07:57 job.xml
[2025-06-04 08:58:50] -rw-r--r-- 2 boincer umatlas 217632793 Jun  4 07:57 EVNT.45006593._002194.pool.root.1
[2025-06-04 08:58:50] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:57 start_atlas.sh
[2025-06-04 08:58:50] drwxrwx--x 2 boincer umatlas      4096 Jun  4 07:57 shared
[2025-06-04 08:58:50] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 07:57 input.tar.gz
[2025-06-04 08:58:50] -rw-r--r-- 1 boincer umatlas         0 Jun  4 07:57 boinc_lockfile
[2025-06-04 08:58:50] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 07:57 pandaJob.out
[2025-06-04 08:58:50] -rw------- 1 boincer umatlas    986812 Jun  4 07:57 agis_schedconf.cvmfs.json
[2025-06-04 08:58:50] -rw------- 1 boincer umatlas   1598969 Jun  4 07:57 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:58:50] drwx------ 4 boincer umatlas      4096 Jun  4 07:57 pilot3
[2025-06-04 08:58:50] -rw-r--r-- 1 boincer umatlas      5867 Jun  4 08:55 init_data.xml
[2025-06-04 08:58:50] -rw------- 1 boincer umatlas 169297157 Jun  4 08:57 HITS.45006595._054829.pool.root.1
[2025-06-04 08:58:50] -rw-r--r-- 1 boincer umatlas       529 Jun  4 08:58 boinc_task_state.xml
[2025-06-04 08:58:50] -rw------- 1 boincer umatlas      1047 Jun  4 08:58 memory_monitor_summary.json
[2025-06-04 08:58:50] -rw------- 1 boincer umatlas    344440 Jun  4 08:58 log.45006595._054829.job.log.tgz.1
[2025-06-04 08:58:50] -rw------- 1 boincer umatlas        95 Jun  4 08:58 pilot_heartbeat.json
[2025-06-04 08:58:50] -rw------- 1 boincer umatlas      7750 Jun  4 08:58 heartbeat.json
[2025-06-04 08:58:50] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 08:58 boinc_mmap_file
[2025-06-04 08:58:50] -rw-r--r-- 1 boincer umatlas        27 Jun  4 08:58 wrapper_checkpoint.txt
[2025-06-04 08:58:50] -rw------- 1 boincer umatlas      4669 Jun  4 08:58 pilotlog.txt
[2025-06-04 08:58:50] -rw------- 1 boincer umatlas    359861 Jun  4 08:58 log.45006595._054829.job.log.1
[2025-06-04 08:58:50] -rw------- 1 boincer umatlas       357 Jun  4 08:58 output.list
[2025-06-04 08:58:50] -rw-r--r-- 1 boincer umatlas       620 Jun  4 08:58 runtime_log
[2025-06-04 08:58:50] -rw------- 1 boincer umatlas    727040 Jun  4 08:58 result.tar.gz
[2025-06-04 08:58:50] -rw------- 1 boincer umatlas       658 Jun  4 08:58 vstLDmOlxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKdnKDmJRx8pm.diag
[2025-06-04 08:58:50] -rw-r--r-- 1 boincer umatlas      8656 Jun  4 08:58 runtime_log.err
[2025-06-04 08:58:50] -rw-r--r-- 1 boincer umatlas     21613 Jun  4 08:58 stderr.txt
[2025-06-04 08:58:50] HITS file was successfully produced:
[2025-06-04 08:58:50] -rw------- 1 boincer umatlas 169297157 Jun  4 08:57 shared/HITS.pool.root.1
[2025-06-04 08:58:50]  *** Contents of shared directory: ***
[2025-06-04 08:58:50] total 379100
[2025-06-04 08:58:50] -rw-r--r-- 2 boincer umatlas 217632793 Jun  4 07:57 ATLAS.root_0
[2025-06-04 08:58:50] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 07:57 start_atlas.sh
[2025-06-04 08:58:50] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 07:57 input.tar.gz
[2025-06-04 08:58:50] -rw------- 1 boincer umatlas 169297157 Jun  4 08:57 HITS.pool.root.1
[2025-06-04 08:58:50] -rw------- 1 boincer umatlas    727040 Jun  4 08:58 result.tar.gz
08:58:51 (1091): run_atlas exited; CPU time 39043.874501
08:58:51 (1091): called boinc_finish(0)

</stderr_txt>
]]>

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