Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:52:26 (962544): wrapper (7.7.26015): starting
07:52:26 (962544): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:52:26] Arguments: --nthreads 8
[2025-06-04 07:52:26] Threads: 8
[2025-06-04 07:52:26] Checking for CVMFS
[2025-06-04 07:52:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:52:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:52:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:52:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:52:27] 2.12.6.0 4082173 23729 261232 146779 3 611 35477947 40960000 30374 16776704 1 325323925 99.793 172676405 27459 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:52:27] CVMFS is ok
[2025-06-04 07:52:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:52:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:52:27] Further information can be found at the LHC@home message board.
[2025-06-04 07:52:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:52:27] Checking for apptainer binary...
[2025-06-04 07:52:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:52:27] Running /usr/bin/apptainer --version
[2025-06-04 07:52:27] apptainer version 1.4.1-1.el9
[2025-06-04 07:52:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:52:27] c8-7-6.aglt2.org
[2025-06-04 07:52:27] apptainer works
[2025-06-04 07:52:27] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:52:27] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:52:27] Starting ATLAS job with PandaID=6666522410
[2025-06-04 07:52:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:00:04]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:00:04]  guid=e29c30ef-7bd1-4f96-b4a8-4cbdf41437cf
[2025-06-04 09:00:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 09:00:04]  is_altstaged=None
[2025-06-04 09:00:04]  is_tar=False
[2025-06-04 09:00:04]  lfn=log.44871837._059281.job.log.tgz.1
[2025-06-04 09:00:04]  mtime=0
[2025-06-04 09:00:04]  protocol_id=None
[2025-06-04 09:00:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:00:04]  replicas=None
[2025-06-04 09:00:04]  scope=mc23_13p6TeV
[2025-06-04 09:00:04]  status=None
[2025-06-04 09:00:04]  status_code=0
[2025-06-04 09:00:04]  storage_token=
[2025-06-04 09:00:04]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6666522410/log.44871837._059281.job.log.tgz.1
[2025-06-04 09:00:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/a0/log.44871837._059281.job.log.tgz.1
[2025-06-04 09:00:04]  workdir=None
[2025-06-04 09:00:04] ]
[2025-06-04 09:00:04] 2025-06-04 12:59:38,745 | INFO     | transferring file log.44871837._059281.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6666522410/log.44871837._059281.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:00:04] 2025-06-04 12:59:38,745 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6666522410/log.44871837._059281.job.log.tgz.1 /tmp/boinchome/slots/2/log.44871837._059281.job
[2025-06-04 09:00:04] 2025-06-04 12:59:38,762 | INFO     | adding to output.list: log.44871837._059281.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/a0/log.44871837._059281.job.log.tg
[2025-06-04 09:00:04] 2025-06-04 12:59:38,762 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:00:04] 2025-06-04 12:59:38,762 | INFO     | summary of transferred files:
[2025-06-04 09:00:04] 2025-06-04 12:59:38,762 | INFO     |  -- lfn=log.44871837._059281.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:00:04] 2025-06-04 12:59:38,763 | INFO     | stage-out finished correctly
[2025-06-04 09:00:04] 2025-06-04 12:59:41,078 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:00:04] 2025-06-04 12:59:41,404 | INFO     | job 6666522410 has state=finished
[2025-06-04 09:00:04] 2025-06-04 12:59:41,404 | INFO     | preparing for final server update for job 6666522410 in state='finished'
[2025-06-04 09:00:04] 2025-06-04 12:59:41,404 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:00:04] 2025-06-04 12:59:41,404 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:00:04] 2025-06-04 12:59:41,404 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:00:04] 2025-06-04 12:59:41,405 | INFO     | job 6666522410 has finished - writing final server update
[2025-06-04 09:00:04] 2025-06-04 12:59:41,405 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:00:04] 2025-06-04 12:59:41,423 | INFO     | executing command: lscpu
[2025-06-04 09:00:04] 2025-06-04 12:59:41,510 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:00:04] 2025-06-04 12:59:43,934 | WARNING  | process 976387 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:00:04] 2025-06-04 12:59:43,935 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6666522410/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:00:04] 2025-06-04 12:59:44,326 | INFO     | number of running child processes to parent process 976387: 1
[2025-06-04 09:00:04] 2025-06-04 12:59:44,326 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:00:04] 2025-06-04 12:59:45,625 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:00:04] 2025-06-04 12:59:45,626 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6666522410/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:00:04] 2025-06-04 12:59:45,626 | INFO     | extracted standard info from prmon json
[2025-06-04 09:00:04] 2025-06-04 12:59:45,626 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:00:04] 2025-06-04 12:59:45,626 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:00:04] 2025-06-04 12:59:45,627 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:00:04] 2025-06-04 12:59:45,627 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:00:04] 2025-06-04 12:59:45,628 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:00:04] 2025-06-04 12:59:45,628 | INFO     | sum of square deviations: 63666310.0
[2025-06-04 09:00:04] 2025-06-04 12:59:45,628 | INFO     | sum of deviations: 5103799057.000003
[2025-06-04 09:00:04] 2025-06-04 12:59:45,628 | INFO     | mean x: 1749040057.0
[2025-06-04 09:00:04] 2025-06-04 12:59:45,628 | INFO     | mean y: 2456589.9830508474
[2025-06-04 09:00:04] 2025-06-04 12:59:45,628 | INFO     | -- intersect: -140209046064.5894
[2025-06-04 09:00:04] 2025-06-04 12:59:45,628 | INFO     | intersect: -140209046064.5894
[2025-06-04 09:00:04] 2025-06-04 12:59:45,628 | INFO     | chi2: 0.7317142667171151
[2025-06-04 09:00:04] 2025-06-04 12:59:45,628 | INFO     | -- intersect: -140209046064.5894
[2025-06-04 09:00:04] 2025-06-04 12:59:45,628 | INFO     | current memory leak: 80.16 B/s (using 59 data points, chi2=0.73)
[2025-06-04 09:00:04] 2025-06-04 12:59:45,629 | INFO     | ..............................
[2025-06-04 09:00:04] 2025-06-04 12:59:45,629 | INFO     | . Timing measurements:
[2025-06-04 09:00:04] 2025-06-04 12:59:45,629 | INFO     | . get job = 0 s
[2025-06-04 09:00:04] 2025-06-04 12:59:45,629 | INFO     | . initial setup = 2 s
[2025-06-04 09:00:04] 2025-06-04 12:59:45,629 | INFO     | . payload setup = 5 s
[2025-06-04 09:00:04] 2025-06-04 12:59:45,629 | INFO     | . stage-in = 0 s
[2025-06-04 09:00:04] 2025-06-04 12:59:45,629 | INFO     | . payload execution = 3996 s
[2025-06-04 09:00:04] 2025-06-04 12:59:45,629 | INFO     | . stage-out = 0 s
[2025-06-04 09:00:04] 2025-06-04 12:59:45,629 | INFO     | . log creation = 0 s
[2025-06-04 09:00:04] 2025-06-04 12:59:45,629 | INFO     | ..............................
[2025-06-04 09:00:04] 2025-06-04 12:59:45,731 | INFO     | 
[2025-06-04 09:00:04] 2025-06-04 12:59:45,731 | INFO     | job summary report
[2025-06-04 09:00:04] 2025-06-04 12:59:45,731 | INFO     | --------------------------------------------------
[2025-06-04 09:00:04] 2025-06-04 12:59:45,731 | INFO     | PanDA job id: 6666522410
[2025-06-04 09:00:04] 2025-06-04 12:59:45,731 | INFO     | task id: 44871837
[2025-06-04 09:00:04] 2025-06-04 12:59:45,731 | INFO     | errors: (none)
[2025-06-04 09:00:04] 2025-06-04 12:59:45,731 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:00:04] 2025-06-04 12:59:45,731 | INFO     | pilot state: finished 
[2025-06-04 09:00:04] 2025-06-04 12:59:45,731 | INFO     | transexitcode: 0
[2025-06-04 09:00:04] 2025-06-04 12:59:45,731 | INFO     | exeerrorcode: 0
[2025-06-04 09:00:04] 2025-06-04 12:59:45,731 | INFO     | exeerrordiag: 
[2025-06-04 09:00:04] 2025-06-04 12:59:45,731 | INFO     | exitcode: 0
[2025-06-04 09:00:04] 2025-06-04 12:59:45,731 | INFO     | exitmsg: OK
[2025-06-04 09:00:04] 2025-06-04 12:59:45,731 | INFO     | cpuconsumptiontime: 27192 s
[2025-06-04 09:00:04] 2025-06-04 12:59:45,731 | INFO     | nevents: 400
[2025-06-04 09:00:04] 2025-06-04 12:59:45,731 | INFO     | neventsw: 0
[2025-06-04 09:00:04] 2025-06-04 12:59:45,731 | INFO     | pid: 976387
[2025-06-04 09:00:04] 2025-06-04 12:59:45,731 | INFO     | pgrp: 976387
[2025-06-04 09:00:04] 2025-06-04 12:59:45,732 | INFO     | corecount: 8
[2025-06-04 09:00:04] 2025-06-04 12:59:45,732 | INFO     | event service: False
[2025-06-04 09:00:04] 2025-06-04 12:59:45,732 | INFO     | sizes: {0: 2397221, 1: 2397420, 5: 2397626, 11: 2397682, 4006: 2423485, 4007: 2432426, 4009: 2432610, 4014: 2432780}
[2025-06-04 09:00:04] 2025-06-04 12:59:45,732 | INFO     | --------------------------------------------------
[2025-06-04 09:00:04] 2025-06-04 12:59:45,732 | INFO     | 
[2025-06-04 09:00:04] 2025-06-04 12:59:45,732 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 09:00:04] 2025-06-04 12:59:45,744 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:00:04] 2025-06-04 12:59:45,745 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:00:04] 2025-06-04 12:59:45,745 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:00:04] 2025-06-04 12:59:45,745 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:00:04] 2025-06-04 12:59:45,745 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:00:04] 2025-06-04 12:59:45,745 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:00:04] 2025-06-04 12:59:45,745 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:00:04] 2025-06-04 12:59:45,745 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:00:04] 2025-06-04 12:59:45,745 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:00:04] 2025-06-04 12:59:45,745 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:00:04] 2025-06-04 12:59:45,745 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:00:04] 2025-06-04 12:59:45,745 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:00:04] 2025-06-04 12:59:45,745 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:00:04] 2025-06-04 12:59:45,745 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:00:04] 2025-06-04 12:59:45,745 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:00:04] 2025-06-04 12:59:45,745 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:00:04] 2025-06-04 12:59:45,745 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:00:04] 2025-06-04 12:59:45,745 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:00:04] 2025-06-04 12:59:45,745 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:00:04] 2025-06-04 12:59:45,745 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:00:04] 2025-06-04 12:59:45,746 | INFO     | job 6666522410 has completed (purged errors)
[2025-06-04 09:00:04] 2025-06-04 12:59:45,746 | INFO     | overall cleanup function is called
[2025-06-04 09:00:04] 2025-06-04 12:59:46,699 | INFO     | PID=967195 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 09:00:04] 2025-06-04 12:59:46,699 | INFO     | .. there are 44 such processes running
[2025-06-04 09:00:04] 2025-06-04 12:59:46,753 | INFO     | --- collectZombieJob: --- 10, [976387]
[2025-06-04 09:00:04] 2025-06-04 12:59:46,753 | INFO     | zombie collector waiting for pid 976387
[2025-06-04 09:00:04] 2025-06-04 12:59:46,753 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:00:04] 2025-06-04 12:59:46,753 | INFO     | collected zombie processes
[2025-06-04 09:00:04] 2025-06-04 12:59:46,753 | INFO     | will attempt to kill all subprocesses of pid=976387
[2025-06-04 09:00:04] 2025-06-04 12:59:47,141 | INFO     | process IDs to be killed: [976387] (in reverse order)
[2025-06-04 09:00:04] 2025-06-04 12:59:47,303 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:00:04] 2025-06-04 12:59:47,304 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:00:04] 2025-06-04 12:59:47,329 | INFO     | did not find any defunct processes belonging to 976387
[2025-06-04 09:00:04] 2025-06-04 12:59:47,351 | INFO     | did not find any defunct processes belonging to 976387
[2025-06-04 09:00:04] 2025-06-04 12:59:47,351 | INFO     | ready for new job
[2025-06-04 09:00:04] 2025-06-04 12:59:47,351 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:00:04] 2025-06-04 12:59:47,353 | INFO     | **************************************
[2025-06-04 09:00:04] 2025-06-04 12:59:47,353 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:00:04] 2025-06-04 12:59:47,353 | INFO     | **************************************
[2025-06-04 09:00:04] 2025-06-04 12:59:47,353 | INFO     | 
[2025-06-04 09:00:04] 2025-06-04 12:59:47,369 | INFO     | architecture information:
[2025-06-04 09:00:04] 2025-06-04 12:59:47,370 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:00:04] 2025-06-04 12:59:47,383 | INFO     | cat /etc/os-release:
[2025-06-04 09:00:04] NAME="CentOS Linux"
[2025-06-04 09:00:04] VERSION="7 (Core)"
[2025-06-04 09:00:04] ID="centos"
[2025-06-04 09:00:04] ID_LIKE="rhel fedora"
[2025-06-04 09:00:04] VERSION_ID="7"
[2025-06-04 09:00:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:00:04] ANSI_COLOR="0;31"
[2025-06-04 09:00:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:00:04] HOME_URL="https://www.centos.org/"
[2025-06-04 09:00:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:00:04] 
[2025-06-04 09:00:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:00:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:00:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:00:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:00:04] 
[2025-06-04 09:00:04] 2025-06-04 12:59:47,384 | INFO     | **************************************
[2025-06-04 09:00:04] 2025-06-04 12:59:47,887 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 09:00:04] 2025-06-04 12:59:47,904 | INFO     | sufficient remaining disk space (172262162432 B)
[2025-06-04 09:00:04] 2025-06-04 12:59:47,904 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:00:04] 2025-06-04 12:59:47,904 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:00:04] 2025-06-04 12:59:47,904 | INFO     | update_server=False
[2025-06-04 09:00:04] 2025-06-04 12:59:47,904 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:00:04] 2025-06-04 12:59:47,905 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:00:04] 2025-06-04 12:59:47,905 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:00:04] 2025-06-04 12:59:47,905 | INFO     | aborting loop
[2025-06-04 09:00:04] 2025-06-04 12:59:48,111 | INFO     | all data control threads have been joined
[2025-06-04 09:00:04] 2025-06-04 12:59:48,516 | INFO     | all job control threads have been joined
[2025-06-04 09:00:04] 2025-06-04 12:59:48,705 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:00:04] 2025-06-04 12:59:48,705 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:00:04] 2025-06-04 12:59:48,705 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:00:04] 2025-06-04 12:59:48,910 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:00:04] 2025-06-04 12:59:48,911 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:00:04] 2025-06-04 12:59:49,116 | INFO     | [data] control thread has finished
[2025-06-04 09:00:04] 2025-06-04 12:59:49,119 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:00:04] 2025-06-04 12:59:49,325 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:00:04] 2025-06-04 12:59:49,396 | INFO     | all payload control threads have been joined
[2025-06-04 09:00:04] 2025-06-04 12:59:49,521 | INFO     | [job] control thread has finished
[2025-06-04 09:00:04] 2025-06-04 12:59:49,554 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:00:04] 2025-06-04 12:59:49,658 | INFO     | [job] validate thread has finished
[2025-06-04 09:00:04] 2025-06-04 12:59:49,790 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:00:04] 2025-06-04 12:59:49,823 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:00:04] 2025-06-04 12:59:49,900 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:00:04] 2025-06-04 12:59:50,402 | INFO     | [payload] control thread has finished
[2025-06-04 09:00:04] 2025-06-04 12:59:50,469 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:00:04] 2025-06-04 12:59:50,689 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:00:04] 2025-06-04 12:59:51,330 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:00:04] 2025-06-04 12:59:51,695 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:00:04] 2025-06-04 12:59:51,911 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:00:04] 2025-06-04 12:59:58,110 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:00:04] 2025-06-04 12:59:59,112 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:00:04] 2025-06-04 12:59:59,381 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140515961370432)>', '<ExcThread(monitor, started 140515467052800)>']
[2025-06-04 09:00:04] 2025-06-04 12:59:59,758 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:00:04] 2025-06-04 12:59:59,759 | INFO     | [monitor] control thread has ended
[2025-06-04 09:00:04] 2025-06-04 13:00:04,406 | INFO     | all workflow threads have been joined
[2025-06-04 09:00:04] 2025-06-04 13:00:04,409 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:00:04] 2025-06-04 13:00:04,409 | INFO     | traces error code: 0
[2025-06-04 09:00:04] 2025-06-04 13:00:04,409 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:00:04] 2025-06-04 13:00:04,546 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:00:04] 2025-06-04 13:00:04,549 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:00:04] 2025-06-04 13:00:04,552 [wrapper] pilotpid: 967195
[2025-06-04 09:00:04] 2025-06-04 13:00:04,555 [wrapper] Pilot exit status: 0
[2025-06-04 09:00:04] 2025-06-04 13:00:04,565 [wrapper] pandaids: 6666522410
[2025-06-04 09:00:04] 2025-06-04 13:00:04,687 [wrapper] cleanup supervisor_pilot 1889606 967196
[2025-06-04 09:00:04] 2025-06-04 13:00:04,691 [wrapper] Test setup, not cleaning
[2025-06-04 09:00:04] 2025-06-04 13:00:04,694 [wrapper] apfmon messages muted
[2025-06-04 09:00:04] 2025-06-04 13:00:04,696 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:00:04] 2025-06-04 13:00:04,699 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:00:04]  *** Error codes and diagnostics ***
[2025-06-04 09:00:04]     "exeErrorCode": 0,
[2025-06-04 09:00:04]     "exeErrorDiag": "",
[2025-06-04 09:00:04]     "pilotErrorCode": 0,
[2025-06-04 09:00:04]     "pilotErrorDiag": "",
[2025-06-04 09:00:04]  *** Listing of results directory ***
[2025-06-04 09:00:04] total 422136
[2025-06-04 09:00:04] -rw-r--r--. 1 boincer umatlas    495897 May 26 20:11 pilot3.tar.gz
[2025-06-04 09:00:04] -rwx------. 1 boincer umatlas     37140 May 26 20:28 runpilot2-wrapper.sh
[2025-06-04 09:00:04] -rw-r--r--. 1 boincer umatlas      5111 May 26 20:28 queuedata.json
[2025-06-04 09:00:04] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:00:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:52 run_atlas
[2025-06-04 09:00:04] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:52 job.xml
[2025-06-04 09:00:04] -rw-r--r--. 2 boincer umatlas 225391117 Jun  4 07:52 EVNT.44871834._002345.pool.root.1
[2025-06-04 09:00:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:52 start_atlas.sh
[2025-06-04 09:00:04] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:52 shared
[2025-06-04 09:00:04] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 07:52 input.tar.gz
[2025-06-04 09:00:04] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:52 boinc_lockfile
[2025-06-04 09:00:04] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 07:52 pandaJob.out
[2025-06-04 09:00:04] -rw-------. 1 boincer umatlas    986812 Jun  4 07:52 agis_schedconf.cvmfs.json
[2025-06-04 09:00:04] -rw-------. 1 boincer umatlas   1598969 Jun  4 07:52 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:00:04] drwx------. 4 boincer umatlas      4096 Jun  4 07:52 pilot3
[2025-06-04 09:00:04] -rw-r--r--. 1 boincer umatlas      7160 Jun  4 08:58 init_data.xml
[2025-06-04 09:00:04] -rw-------. 1 boincer umatlas        95 Jun  4 08:59 pilot_heartbeat.json
[2025-06-04 09:00:04] -rw-------. 1 boincer umatlas 201654260 Jun  4 08:59 HITS.44871837._059281.pool.root.1
[2025-06-04 09:00:04] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:59 boinc_task_state.xml
[2025-06-04 09:00:04] -rw-------. 1 boincer umatlas      1031 Jun  4 08:59 memory_monitor_summary.json
[2025-06-04 09:00:04] -rw-------. 1 boincer umatlas    288551 Jun  4 08:59 log.44871837._059281.job.log.tgz.1
[2025-06-04 09:00:04] -rw-------. 1 boincer umatlas      7689 Jun  4 08:59 heartbeat.json
[2025-06-04 09:00:04] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:59 wrapper_checkpoint.txt
[2025-06-04 09:00:04] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:59 boinc_mmap_file
[2025-06-04 09:00:04] -rw-------. 1 boincer umatlas      4426 Jun  4 09:00 pilotlog.txt
[2025-06-04 09:00:04] -rw-------. 1 boincer umatlas    405169 Jun  4 09:00 log.44871837._059281.job.log.1
[2025-06-04 09:00:04] -rw-------. 1 boincer umatlas       357 Jun  4 09:00 output.list
[2025-06-04 09:00:04] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:00 runtime_log
[2025-06-04 09:00:04] -rw-------. 1 boincer umatlas    716800 Jun  4 09:00 result.tar.gz
[2025-06-04 09:00:04] -rw-------. 1 boincer umatlas       651 Jun  4 09:00 uIHKDm3Lxd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmt4QKDmHuK4Do.diag
[2025-06-04 09:00:04] -rw-r--r--. 1 boincer umatlas      8649 Jun  4 09:00 runtime_log.err
[2025-06-04 09:00:04] -rw-r--r--. 1 boincer umatlas     21354 Jun  4 09:00 stderr.txt
[2025-06-04 09:00:04] HITS file was successfully produced:
[2025-06-04 09:00:04] -rw-------. 1 boincer umatlas 201654260 Jun  4 08:59 shared/HITS.pool.root.1
[2025-06-04 09:00:04]  *** Contents of shared directory: ***
[2025-06-04 09:00:04] total 418264
[2025-06-04 09:00:04] -rw-r--r--. 2 boincer umatlas 225391117 Jun  4 07:52 ATLAS.root_0
[2025-06-04 09:00:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:52 start_atlas.sh
[2025-06-04 09:00:04] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 07:52 input.tar.gz
[2025-06-04 09:00:04] -rw-------. 1 boincer umatlas 201654260 Jun  4 08:59 HITS.pool.root.1
[2025-06-04 09:00:04] -rw-------. 1 boincer umatlas    716800 Jun  4 09:00 result.tar.gz
09:00:06 (962544): run_atlas exited; CPU time 27296.622181
09:00:06 (962544): called boinc_finish(0)

</stderr_txt>
]]>

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