Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:50:21 (3530047): wrapper (7.7.26015): starting
07:50:21 (3530047): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:50:21] Arguments: --nthreads 8
[2025-06-04 07:50:21] Threads: 8
[2025-06-04 07:50:21] Checking for CVMFS
[2025-06-04 07:50:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:50:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:50:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:50:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:50:22] 2.12.6.0 15283 31303 276220 146779 3 547 25792398 32503809 33580 16776704 0 399231608 99.701 298095749 36343 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:50:22] CVMFS is ok
[2025-06-04 07:50:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:50:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:50:22] Further information can be found at the LHC@home message board.
[2025-06-04 07:50:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:50:22] Checking for apptainer binary...
[2025-06-04 07:50:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:50:22] Running /usr/bin/apptainer --version
[2025-06-04 07:50:22] apptainer version 1.4.1-1.el9
[2025-06-04 07:50:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:50:22] c8-7-1.aglt2.org
[2025-06-04 07:50:22] apptainer works
[2025-06-04 07:50:22] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:50:22] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:50:22] Starting ATLAS job with PandaID=6678391559
[2025-06-04 07:50:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:39:57]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:39:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 08:39:57]  is_altstaged=None
[2025-06-04 08:39:57]  is_tar=False
[2025-06-04 08:39:57]  lfn=log.45006595._054921.job.log.tgz.1
[2025-06-04 08:39:57]  mtime=0
[2025-06-04 08:39:57]  protocol_id=None
[2025-06-04 08:39:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:39:57]  replicas=None
[2025-06-04 08:39:57]  scope=mc23_13p6TeV
[2025-06-04 08:39:57]  status=None
[2025-06-04 08:39:57]  status_code=0
[2025-06-04 08:39:57]  storage_token=
[2025-06-04 08:39:57]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678391559/log.45006595._054921.job.log.tgz.1
[2025-06-04 08:39:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/1f/log.45006595._054921.job.log.tgz.1
[2025-06-04 08:39:57]  workdir=None
[2025-06-04 08:39:57] ]
[2025-06-04 08:39:57] 2025-06-04 12:39:37,959 | INFO     | transferring file log.45006595._054921.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678391559/log.45006595._054921.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:39:57] 2025-06-04 12:39:37,959 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678391559/log.45006595._054921.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._054921.job
[2025-06-04 08:39:57] 2025-06-04 12:39:37,977 | INFO     | adding to output.list: log.45006595._054921.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/1f/log.45006595._054921.job.log.tg
[2025-06-04 08:39:57] 2025-06-04 12:39:37,977 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:39:57] 2025-06-04 12:39:37,978 | INFO     | summary of transferred files:
[2025-06-04 08:39:57] 2025-06-04 12:39:37,978 | INFO     |  -- lfn=log.45006595._054921.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:39:57] 2025-06-04 12:39:37,978 | INFO     | stage-out finished correctly
[2025-06-04 08:39:57] 2025-06-04 12:39:40,360 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:39:57] 2025-06-04 12:39:40,413 | INFO     | job 6678391559 has state=finished
[2025-06-04 08:39:57] 2025-06-04 12:39:40,413 | INFO     | preparing for final server update for job 6678391559 in state='finished'
[2025-06-04 08:39:57] 2025-06-04 12:39:40,414 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:39:57] 2025-06-04 12:39:40,414 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:39:57] 2025-06-04 12:39:40,415 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:39:57] 2025-06-04 12:39:40,415 | INFO     | job 6678391559 has finished - writing final server update
[2025-06-04 08:39:57] 2025-06-04 12:39:40,416 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:39:57] 2025-06-04 12:39:40,436 | INFO     | executing command: lscpu
[2025-06-04 08:39:57] 2025-06-04 12:39:40,515 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:39:57] 2025-06-04 12:39:41,368 | WARNING  | process 3555524 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:39:57] 2025-06-04 12:39:41,370 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678391559/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:39:57] 2025-06-04 12:39:41,438 | INFO     | PID=3537336 has CPU usage=14.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 08:39:57] 2025-06-04 12:39:41,439 | INFO     | .. there are 50 such processes running
[2025-06-04 08:39:57] 2025-06-04 12:39:41,845 | INFO     | number of running child processes to parent process 3555524: 1
[2025-06-04 08:39:57] 2025-06-04 12:39:41,845 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:39:57] 2025-06-04 12:39:44,348 | INFO     | monitor loop #217: job 0:6678391559 is in state 'finished'
[2025-06-04 08:39:57] 2025-06-04 12:39:44,348 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:39:57] 2025-06-04 12:39:44,563 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:39:57] 2025-06-04 12:39:44,564 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678391559/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:39:57] 2025-06-04 12:39:44,565 | INFO     | extracted standard info from prmon json
[2025-06-04 08:39:57] 2025-06-04 12:39:44,565 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:39:57] 2025-06-04 12:39:44,565 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:39:57] 2025-06-04 12:39:44,566 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:39:57] 2025-06-04 12:39:44,566 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:39:57] 2025-06-04 12:39:44,567 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:39:57] 2025-06-04 12:39:44,567 | INFO     | sum of square deviations: 21358540.0
[2025-06-04 08:39:57] 2025-06-04 12:39:44,567 | INFO     | sum of deviations: 4089094618.0000005
[2025-06-04 08:39:57] 2025-06-04 12:39:44,568 | INFO     | mean x: 1749039383.0
[2025-06-04 08:39:57] 2025-06-04 12:39:44,568 | INFO     | mean y: 2139395.048780488
[2025-06-04 08:39:57] 2025-06-04 12:39:44,568 | INFO     | -- intersect: -334851625314.30597
[2025-06-04 08:39:57] 2025-06-04 12:39:44,568 | INFO     | intersect: -334851625314.30597
[2025-06-04 08:39:57] 2025-06-04 12:39:44,568 | INFO     | chi2: 0.7912198404539185
[2025-06-04 08:39:57] 2025-06-04 12:39:44,568 | INFO     | -- intersect: -334851625314.30597
[2025-06-04 08:39:57] 2025-06-04 12:39:44,568 | INFO     | current memory leak: 191.45 B/s (using 41 data points, chi2=0.79)
[2025-06-04 08:39:57] 2025-06-04 12:39:44,568 | INFO     | ..............................
[2025-06-04 08:39:57] 2025-06-04 12:39:44,569 | INFO     | . Timing measurements:
[2025-06-04 08:39:57] 2025-06-04 12:39:44,569 | INFO     | . get job = 0 s
[2025-06-04 08:39:57] 2025-06-04 12:39:44,569 | INFO     | . initial setup = 2 s
[2025-06-04 08:39:57] 2025-06-04 12:39:44,569 | INFO     | . payload setup = 6 s
[2025-06-04 08:39:57] 2025-06-04 12:39:44,569 | INFO     | . stage-in = 0 s
[2025-06-04 08:39:57] 2025-06-04 12:39:44,569 | INFO     | . payload execution = 2919 s
[2025-06-04 08:39:57] 2025-06-04 12:39:44,569 | INFO     | . stage-out = 0 s
[2025-06-04 08:39:57] 2025-06-04 12:39:44,569 | INFO     | . log creation = 0 s
[2025-06-04 08:39:57] 2025-06-04 12:39:44,569 | INFO     | ..............................
[2025-06-04 08:39:57] 2025-06-04 12:39:44,614 | INFO     | 
[2025-06-04 08:39:57] 2025-06-04 12:39:44,614 | INFO     | job summary report
[2025-06-04 08:39:57] 2025-06-04 12:39:44,614 | INFO     | --------------------------------------------------
[2025-06-04 08:39:57] 2025-06-04 12:39:44,614 | INFO     | PanDA job id: 6678391559
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | task id: 45006595
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | errors: (none)
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | pilot state: finished 
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | transexitcode: 0
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | exeerrorcode: 0
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | exeerrordiag: 
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | exitcode: 0
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | exitmsg: OK
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | cpuconsumptiontime: 18669 s
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | nevents: 400
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | neventsw: 0
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | pid: 3555524
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | pgrp: 3555524
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | corecount: 8
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | event service: False
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | sizes: {0: 2397341, 3: 2397547, 10: 2397575, 2930: 2422857, 2931: 2431798, 2933: 2431854, 2938: 2432152}
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | --------------------------------------------------
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | 
[2025-06-04 08:39:57] 2025-06-04 12:39:44,615 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:39:57] 2025-06-04 12:39:44,634 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:39:57] 2025-06-04 12:39:44,634 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:39:57] 2025-06-04 12:39:44,634 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:39:57] 2025-06-04 12:39:44,634 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:39:57] 2025-06-04 12:39:44,634 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:39:57] 2025-06-04 12:39:44,634 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:39:57] 2025-06-04 12:39:44,634 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:39:57] 2025-06-04 12:39:44,634 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:39:57] 2025-06-04 12:39:44,634 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:39:57] 2025-06-04 12:39:44,635 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:39:57] 2025-06-04 12:39:44,635 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:39:57] 2025-06-04 12:39:44,635 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:39:57] 2025-06-04 12:39:44,635 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:39:57] 2025-06-04 12:39:44,635 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:39:57] 2025-06-04 12:39:44,635 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:39:57] 2025-06-04 12:39:44,635 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:39:57] 2025-06-04 12:39:44,635 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:39:57] 2025-06-04 12:39:44,635 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:39:57] 2025-06-04 12:39:44,635 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:39:57] 2025-06-04 12:39:44,635 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:39:57] 2025-06-04 12:39:44,635 | INFO     | job 6678391559 has completed (purged errors)
[2025-06-04 08:39:57] 2025-06-04 12:39:44,635 | INFO     | overall cleanup function is called
[2025-06-04 08:39:57] 2025-06-04 12:39:45,643 | INFO     | --- collectZombieJob: --- 10, [3555524]
[2025-06-04 08:39:57] 2025-06-04 12:39:45,643 | INFO     | zombie collector waiting for pid 3555524
[2025-06-04 08:39:57] 2025-06-04 12:39:45,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:39:57] 2025-06-04 12:39:45,643 | INFO     | collected zombie processes
[2025-06-04 08:39:57] 2025-06-04 12:39:45,643 | INFO     | will attempt to kill all subprocesses of pid=3555524
[2025-06-04 08:39:57] 2025-06-04 12:39:46,094 | INFO     | process IDs to be killed: [3555524] (in reverse order)
[2025-06-04 08:39:57] 2025-06-04 12:39:46,261 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:39:57] 2025-06-04 12:39:46,261 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:39:57] 2025-06-04 12:39:46,288 | INFO     | did not find any defunct processes belonging to 3555524
[2025-06-04 08:39:57] 2025-06-04 12:39:46,314 | INFO     | did not find any defunct processes belonging to 3555524
[2025-06-04 08:39:57] 2025-06-04 12:39:46,315 | INFO     | ready for new job
[2025-06-04 08:39:57] 2025-06-04 12:39:46,315 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:39:57] 2025-06-04 12:39:46,316 | INFO     | **************************************
[2025-06-04 08:39:57] 2025-06-04 12:39:46,317 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:39:57] 2025-06-04 12:39:46,317 | INFO     | **************************************
[2025-06-04 08:39:57] 2025-06-04 12:39:46,317 | INFO     | 
[2025-06-04 08:39:57] 2025-06-04 12:39:46,334 | INFO     | architecture information:
[2025-06-04 08:39:57] 2025-06-04 12:39:46,334 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:39:57] 2025-06-04 12:39:46,347 | INFO     | cat /etc/os-release:
[2025-06-04 08:39:57] NAME="CentOS Linux"
[2025-06-04 08:39:57] VERSION="7 (Core)"
[2025-06-04 08:39:57] ID="centos"
[2025-06-04 08:39:57] ID_LIKE="rhel fedora"
[2025-06-04 08:39:57] VERSION_ID="7"
[2025-06-04 08:39:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:39:57] ANSI_COLOR="0;31"
[2025-06-04 08:39:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:39:57] HOME_URL="https://www.centos.org/"
[2025-06-04 08:39:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:39:57] 
[2025-06-04 08:39:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:39:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:39:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:39:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:39:57] 
[2025-06-04 08:39:57] 2025-06-04 12:39:46,348 | INFO     | **************************************
[2025-06-04 08:39:57] 2025-06-04 12:39:46,850 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:39:57] 2025-06-04 12:39:46,868 | INFO     | sufficient remaining disk space (94794416128 B)
[2025-06-04 08:39:57] 2025-06-04 12:39:46,868 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:39:57] 2025-06-04 12:39:46,869 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:39:57] 2025-06-04 12:39:46,869 | INFO     | update_server=False
[2025-06-04 08:39:57] 2025-06-04 12:39:46,869 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:39:57] 2025-06-04 12:39:46,869 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:39:57] 2025-06-04 12:39:46,869 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:39:57] 2025-06-04 12:39:47,368 | INFO     | all payload control threads have been joined
[2025-06-04 08:39:57] 2025-06-04 12:39:47,443 | INFO     | all data control threads have been joined
[2025-06-04 08:39:57] 2025-06-04 12:39:47,454 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:39:57] 2025-06-04 12:39:47,454 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:39:57] 2025-06-04 12:39:47,454 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:39:57] 2025-06-04 12:39:47,647 | INFO     | all job control threads have been joined
[2025-06-04 08:39:57] 2025-06-04 12:39:47,860 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:39:57] 2025-06-04 12:39:47,861 | INFO     | aborting loop
[2025-06-04 08:39:57] 2025-06-04 12:39:47,874 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:39:57] 2025-06-04 12:39:47,979 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:39:57] 2025-06-04 12:39:48,190 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:39:57] 2025-06-04 12:39:48,344 | INFO     | [job] validate thread has finished
[2025-06-04 08:39:57] 2025-06-04 12:39:48,373 | INFO     | [payload] control thread has finished
[2025-06-04 08:39:57] 2025-06-04 12:39:48,442 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:39:57] 2025-06-04 12:39:48,448 | INFO     | [data] control thread has finished
[2025-06-04 08:39:57] 2025-06-04 12:39:48,499 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:39:57] 2025-06-04 12:39:48,647 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:39:57] 2025-06-04 12:39:48,652 | INFO     | [job] control thread has finished
[2025-06-04 08:39:57] 2025-06-04 12:39:48,866 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:39:57] 2025-06-04 12:39:48,874 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:39:57] 2025-06-04 12:39:49,137 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:39:57] 2025-06-04 12:39:49,154 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:39:57] 2025-06-04 12:39:49,624 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:39:57] 2025-06-04 12:39:50,629 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:39:57] 2025-06-04 12:39:50,872 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:39:57] 2025-06-04 12:39:51,870 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140217579919168)>', '<ExcThread(monitor, started 140217084258048)>']
[2025-06-04 08:39:57] 2025-06-04 12:39:52,476 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:39:57] 2025-06-04 12:39:52,476 | INFO     | [monitor] control thread has ended
[2025-06-04 08:39:57] 2025-06-04 12:39:56,895 | INFO     | all workflow threads have been joined
[2025-06-04 08:39:57] 2025-06-04 12:39:56,895 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:39:57] 2025-06-04 12:39:56,895 | INFO     | traces error code: 0
[2025-06-04 08:39:57] 2025-06-04 12:39:56,895 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:39:57] 2025-06-04 12:39:57,061 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:39:57] 2025-06-04 12:39:57,064 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:39:57] 2025-06-04 12:39:57,066 [wrapper] pilotpid: 3537336
[2025-06-04 08:39:57] 2025-06-04 12:39:57,069 [wrapper] Pilot exit status: 0
[2025-06-04 08:39:57] 2025-06-04 12:39:57,079 [wrapper] pandaids: 6678391559
[2025-06-04 08:39:57] 2025-06-04 12:39:57,204 [wrapper] cleanup supervisor_pilot  814872 3537337
[2025-06-04 08:39:57] 2025-06-04 12:39:57,207 [wrapper] Test setup, not cleaning
[2025-06-04 08:39:57] 2025-06-04 12:39:57,209 [wrapper] apfmon messages muted
[2025-06-04 08:39:57] 2025-06-04 12:39:57,211 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:39:57] 2025-06-04 12:39:57,213 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:39:57]  *** Error codes and diagnostics ***
[2025-06-04 08:39:57]     "exeErrorCode": 0,
[2025-06-04 08:39:57]     "exeErrorDiag": "",
[2025-06-04 08:39:57]     "pilotErrorCode": 0,
[2025-06-04 08:39:57]     "pilotErrorDiag": "",
[2025-06-04 08:39:57]  *** Listing of results directory ***
[2025-06-04 08:39:57] total 387188
[2025-06-04 08:39:57] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:04 pilot3.tar.gz
[2025-06-04 08:39:57] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:29 queuedata.json
[2025-06-04 08:39:57] -rwx------. 1 boincer umatlas     37140 Jun  4 03:30 runpilot2-wrapper.sh
[2025-06-04 08:39:57] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:39:57] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:50 run_atlas
[2025-06-04 08:39:57] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:50 job.xml
[2025-06-04 08:39:57] -rw-r--r--. 2 boincer umatlas 215443568 Jun  4 07:50 EVNT.45006593._002197.pool.root.1
[2025-06-04 08:39:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:50 start_atlas.sh
[2025-06-04 08:39:57] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:50 shared
[2025-06-04 08:39:57] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 07:50 input.tar.gz
[2025-06-04 08:39:57] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:50 boinc_lockfile
[2025-06-04 08:39:57] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 07:50 pandaJob.out
[2025-06-04 08:39:57] -rw-------. 1 boincer umatlas    986812 Jun  4 07:50 agis_schedconf.cvmfs.json
[2025-06-04 08:39:57] -rw-------. 1 boincer umatlas   1598969 Jun  4 07:50 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:39:57] drwx------. 4 boincer umatlas      4096 Jun  4 07:50 pilot3
[2025-06-04 08:39:57] -rw-r--r--. 1 boincer umatlas      7159 Jun  4 08:38 init_data.xml
[2025-06-04 08:39:57] -rw-------. 1 boincer umatlas 175976351 Jun  4 08:39 HITS.45006595._054921.pool.root.1
[2025-06-04 08:39:57] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:39 boinc_task_state.xml
[2025-06-04 08:39:57] -rw-------. 1 boincer umatlas      1032 Jun  4 08:39 memory_monitor_summary.json
[2025-06-04 08:39:57] -rw-------. 1 boincer umatlas        95 Jun  4 08:39 pilot_heartbeat.json
[2025-06-04 08:39:57] -rw-------. 1 boincer umatlas    300114 Jun  4 08:39 log.45006595._054921.job.log.tgz.1
[2025-06-04 08:39:57] -rw-------. 1 boincer umatlas      7686 Jun  4 08:39 heartbeat.json
[2025-06-04 08:39:57] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:39 boinc_mmap_file
[2025-06-04 08:39:57] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:39 wrapper_checkpoint.txt
[2025-06-04 08:39:57] -rw-------. 1 boincer umatlas      4353 Jun  4 08:39 pilotlog.txt
[2025-06-04 08:39:57] -rw-------. 1 boincer umatlas    311667 Jun  4 08:39 log.45006595._054921.job.log.1
[2025-06-04 08:39:57] -rw-------. 1 boincer umatlas       357 Jun  4 08:39 output.list
[2025-06-04 08:39:57] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:39 runtime_log
[2025-06-04 08:39:57] -rw-------. 1 boincer umatlas    634880 Jun  4 08:39 result.tar.gz
[2025-06-04 08:39:57] -rw-------. 1 boincer umatlas       649 Jun  4 08:39 xS6NDmGlxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrcnKDmtlnyMn.diag
[2025-06-04 08:39:57] -rw-r--r--. 1 boincer umatlas      8649 Jun  4 08:39 runtime_log.err
[2025-06-04 08:39:57] -rw-r--r--. 1 boincer umatlas     21455 Jun  4 08:39 stderr.txt
[2025-06-04 08:39:57] HITS file was successfully produced:
[2025-06-04 08:39:57] -rw-------. 1 boincer umatlas 175976351 Jun  4 08:39 shared/HITS.pool.root.1
[2025-06-04 08:39:57]  *** Contents of shared directory: ***
[2025-06-04 08:39:57] total 383392
[2025-06-04 08:39:57] -rw-r--r--. 2 boincer umatlas 215443568 Jun  4 07:50 ATLAS.root_0
[2025-06-04 08:39:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:50 start_atlas.sh
[2025-06-04 08:39:57] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 07:50 input.tar.gz
[2025-06-04 08:39:57] -rw-------. 1 boincer umatlas 175976351 Jun  4 08:39 HITS.pool.root.1
[2025-06-04 08:39:57] -rw-------. 1 boincer umatlas    634880 Jun  4 08:39 result.tar.gz
08:39:58 (3530047): run_atlas exited; CPU time 18760.329694
08:39:58 (3530047): called boinc_finish(0)

</stderr_txt>
]]>

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