Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:16:29 (296549): wrapper (7.7.26015): starting
22:16:29 (296549): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 22:16:29] Arguments: --nthreads 3
[2025-06-04 22:16:29] Threads: 3
[2025-06-04 22:16:29] Checking for CVMFS
[2025-06-04 22:16:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:16:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:16:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:16:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:16:30] 2.9.2.0 3016 860 72408 146792 1 56 30763735 36864001 0 130560 0 799997 99.993 164087 47589 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 22:16:30] CVMFS is ok
[2025-06-04 22:16:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:16:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:16:30] Further information can be found at the LHC@home message board.
[2025-06-04 22:16:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:16:30] Checking for apptainer binary...
[2025-06-04 22:16:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:16:30] Running /usr/bin/apptainer --version
[2025-06-04 22:16:30] apptainer version 1.3.6-6.1
[2025-06-04 22:16:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:16:30] magicA252
[2025-06-04 22:16:30] apptainer works
[2025-06-04 22:16:30] Set ATHENA_PROC_NUMBER=3
[2025-06-04 22:16:30] Set ATHENA_CORE_NUMBER=3
[2025-06-04 22:16:30] Starting ATLAS job with PandaID=6667883092
[2025-06-04 22:16:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:00:04]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:00:04] 2025-06-04 21:59:42,118 | INFO     | executing command: lscpu
[2025-06-05 00:00:04] 2025-06-04 21:59:42,134 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 00:00:04] 2025-06-04 21:59:42,214 | INFO     | monitor loop #477: job 0:6667883092 is in state 'finished'
[2025-06-05 00:00:04] 2025-06-04 21:59:42,214 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:00:04] 2025-06-04 21:59:44,717 | INFO     | monitor loop #478: job 0:6667883092 is in state 'finished'
[2025-06-05 00:00:04] 2025-06-04 21:59:44,717 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:00:04] 2025-06-04 21:59:45,610 | INFO     | PID=300179 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-05 00:00:04] 2025-06-04 21:59:45,707 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 00:00:04] 2025-06-04 21:59:45,707 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6667883092/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 00:00:04] 2025-06-04 21:59:45,707 | INFO     | extracted standard info from prmon json
[2025-06-05 00:00:04] 2025-06-04 21:59:45,707 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 00:00:04] 2025-06-04 21:59:45,707 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:00:04] 2025-06-04 21:59:45,707 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:00:04] 2025-06-04 21:59:45,707 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:00:04] 2025-06-04 21:59:45,708 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:00:04] 2025-06-04 21:59:45,708 | INFO     | sum of square deviations: 319447850.0
[2025-06-05 00:00:04] 2025-06-04 21:59:45,708 | INFO     | sum of deviations: 5793133461.0
[2025-06-05 00:00:04] 2025-06-04 21:59:45,709 | INFO     | mean x: 1749071266.0
[2025-06-05 00:00:04] 2025-06-04 21:59:45,709 | INFO     | mean y: 2392711.9405940594
[2025-06-05 00:00:04] 2025-06-04 21:59:45,709 | INFO     | -- intersect: -31716722870.58166
[2025-06-05 00:00:04] 2025-06-04 21:59:45,709 | INFO     | intersect: -31716722870.58166
[2025-06-05 00:00:04] 2025-06-04 21:59:45,709 | INFO     | chi2: 1.6334516250065862
[2025-06-05 00:00:04] 2025-06-04 21:59:45,709 | INFO     | sum of square deviations: 274312120.0
[2025-06-05 00:00:04] 2025-06-04 21:59:45,709 | INFO     | sum of deviations: 6130282992.5
[2025-06-05 00:00:04] 2025-06-04 21:59:45,709 | INFO     | mean x: 1749071113.5
[2025-06-05 00:00:04] 2025-06-04 21:59:45,709 | INFO     | mean y: 2393852.21875
[2025-06-05 00:00:04] 2025-06-04 21:59:45,709 | INFO     | -- intersect: -39085565147.777626
[2025-06-05 00:00:04] 2025-06-04 21:59:45,709 | INFO     | intersect: -39085565147.777626
[2025-06-05 00:00:04] 2025-06-04 21:59:45,709 | INFO     | chi2: 1.6368171942105327
[2025-06-05 00:00:04] 2025-06-04 21:59:45,709 | INFO     | current chi2=1.6368171942105327 (change=-0.20604033522773677 %)
[2025-06-05 00:00:04] 2025-06-04 21:59:45,709 | INFO     | right removable region: 95
[2025-06-05 00:00:04] 2025-06-04 21:59:45,709 | INFO     | sum of square deviations: 274312120.0
[2025-06-05 00:00:04] 2025-06-04 21:59:45,709 | INFO     | sum of deviations: -8959642820.5
[2025-06-05 00:00:04] 2025-06-04 21:59:45,709 | INFO     | mean x: 1749071418.5
[2025-06-05 00:00:04] 2025-06-04 21:59:45,709 | INFO     | mean y: 2441400.78125
[2025-06-05 00:00:04] 2025-06-04 21:59:45,709 | INFO     | -- intersect: 57130996921.05966
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | intersect: 57130996921.05966
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | chi2: 0.02971846836514303
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | current chi2=0.02971846836514303 (change=98.18063370165473 %)
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | sum of square deviations: 233641590.0
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | sum of deviations: -8522767988.000002
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | mean x: 1749071571.0
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | mean y: 2439749.10989011
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | -- intersect: 63804998163.64419
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | intersect: 63804998163.64419
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | chi2: 0.025948216262246478
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | current chi2=0.025948216262246478 (change=12.686562633620454 %)
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | left removable region: 20
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | sum of square deviations: 130793150.0
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | sum of deviations: -6007587135.0
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | mean x: 1749071693.0
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | mean y: 2437523.0933333333
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | -- intersect: 80340747297.41615
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | intersect: 80340747297.41615
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | chi2: 0.02133095575567585
[2025-06-05 00:00:04] 2025-06-04 21:59:45,710 | INFO     | -- intersect: 80340747297.41615
[2025-06-05 00:00:04] 2025-06-04 21:59:45,711 | INFO     | current memory leak: -45.93 B/s (using 75 data points, chi2=0.02)
[2025-06-05 00:00:04] 2025-06-04 21:59:45,711 | INFO     | ..............................
[2025-06-05 00:00:04] 2025-06-04 21:59:45,711 | INFO     | . Timing measurements:
[2025-06-05 00:00:04] 2025-06-04 21:59:45,711 | INFO     | . get job = 0 s
[2025-06-05 00:00:04] 2025-06-04 21:59:45,711 | INFO     | . initial setup = 1 s
[2025-06-05 00:00:04] 2025-06-04 21:59:45,711 | INFO     | . payload setup = 3 s
[2025-06-05 00:00:04] 2025-06-04 21:59:45,711 | INFO     | . stage-in = 0 s
[2025-06-05 00:00:04] 2025-06-04 21:59:45,711 | INFO     | . payload execution = 6161 s
[2025-06-05 00:00:04] 2025-06-04 21:59:45,711 | INFO     | . stage-out = 0 s
[2025-06-05 00:00:04] 2025-06-04 21:59:45,711 | INFO     | . log creation = 0 s
[2025-06-05 00:00:04] 2025-06-04 21:59:45,711 | INFO     | ..............................
[2025-06-05 00:00:04] 2025-06-04 21:59:45,741 | INFO     | 
[2025-06-05 00:00:04] 2025-06-04 21:59:45,741 | INFO     | job summary report
[2025-06-05 00:00:04] 2025-06-04 21:59:45,741 | INFO     | --------------------------------------------------
[2025-06-05 00:00:04] 2025-06-04 21:59:45,741 | INFO     | PanDA job id: 6667883092
[2025-06-05 00:00:04] 2025-06-04 21:59:45,741 | INFO     | task id: 44871837
[2025-06-05 00:00:04] 2025-06-04 21:59:45,741 | INFO     | errors: (none)
[2025-06-05 00:00:04] 2025-06-04 21:59:45,742 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:00:04] 2025-06-04 21:59:45,742 | INFO     | pilot state: finished 
[2025-06-05 00:00:04] 2025-06-04 21:59:45,742 | INFO     | transexitcode: 0
[2025-06-05 00:00:04] 2025-06-04 21:59:45,742 | INFO     | exeerrorcode: 0
[2025-06-05 00:00:04] 2025-06-04 21:59:45,742 | INFO     | exeerrordiag: 
[2025-06-05 00:00:04] 2025-06-04 21:59:45,742 | INFO     | exitcode: 0
[2025-06-05 00:00:04] 2025-06-04 21:59:45,742 | INFO     | exitmsg: OK
[2025-06-05 00:00:04] 2025-06-04 21:59:45,742 | INFO     | cpuconsumptiontime: 17806 s
[2025-06-05 00:00:04] 2025-06-04 21:59:45,742 | INFO     | nevents: 400
[2025-06-05 00:00:04] 2025-06-04 21:59:45,742 | INFO     | neventsw: 0
[2025-06-05 00:00:04] 2025-06-04 21:59:45,742 | INFO     | pid: 306673
[2025-06-05 00:00:04] 2025-06-04 21:59:45,742 | INFO     | pgrp: 306673
[2025-06-05 00:00:04] 2025-06-04 21:59:45,742 | INFO     | corecount: 3
[2025-06-05 00:00:04] 2025-06-04 21:59:45,742 | INFO     | event service: False
[2025-06-05 00:00:04] 2025-06-04 21:59:45,742 | INFO     | sizes: {0: 2397224, 1: 2397423, 3: 2397629, 11: 2397657, 6168: 2424610, 6169: 2433557, 6171: 2433741, 6176: 2433911}
[2025-06-05 00:00:04] 2025-06-04 21:59:45,742 | INFO     | --------------------------------------------------
[2025-06-05 00:00:04] 2025-06-04 21:59:45,742 | INFO     | 
[2025-06-05 00:00:04] 2025-06-04 21:59:45,742 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 00:00:04] 2025-06-04 21:59:45,755 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:00:04] 2025-06-04 21:59:45,755 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:00:04] 2025-06-04 21:59:45,755 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:00:04] 2025-06-04 21:59:45,755 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:00:04] 2025-06-04 21:59:45,755 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:00:04] 2025-06-04 21:59:45,755 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:00:04] 2025-06-04 21:59:45,755 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:00:04] 2025-06-04 21:59:45,755 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:00:04] 2025-06-04 21:59:45,755 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:00:04] 2025-06-04 21:59:45,755 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:00:04] 2025-06-04 21:59:45,755 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:00:04] 2025-06-04 21:59:45,755 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:00:04] 2025-06-04 21:59:45,755 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:00:04] 2025-06-04 21:59:45,755 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:00:04] 2025-06-04 21:59:45,756 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:00:04] 2025-06-04 21:59:45,756 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:00:04] 2025-06-04 21:59:45,756 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:00:04] 2025-06-04 21:59:45,756 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:00:04] 2025-06-04 21:59:45,756 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:00:04] 2025-06-04 21:59:45,756 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:00:04] 2025-06-04 21:59:45,756 | INFO     | job 6667883092 has completed (purged errors)
[2025-06-05 00:00:04] 2025-06-04 21:59:45,756 | INFO     | overall cleanup function is called
[2025-06-05 00:00:04] 2025-06-04 21:59:46,760 | INFO     | --- collectZombieJob: --- 10, [306673]
[2025-06-05 00:00:04] 2025-06-04 21:59:46,760 | INFO     | zombie collector waiting for pid 306673
[2025-06-05 00:00:04] 2025-06-04 21:59:46,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:00:04] 2025-06-04 21:59:46,760 | INFO     | collected zombie processes
[2025-06-05 00:00:04] 2025-06-04 21:59:46,760 | INFO     | will attempt to kill all subprocesses of pid=306673
[2025-06-05 00:00:04] 2025-06-04 21:59:46,800 | INFO     | process IDs to be killed: [306673] (in reverse order)
[2025-06-05 00:00:04] 2025-06-04 21:59:46,825 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:00:04] 2025-06-04 21:59:46,825 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:00:04] 2025-06-04 21:59:46,826 | INFO     | did not find any defunct processes belonging to 306673
[2025-06-05 00:00:04] 2025-06-04 21:59:46,827 | INFO     | did not find any defunct processes belonging to 306673
[2025-06-05 00:00:04] 2025-06-04 21:59:46,827 | INFO     | ready for new job
[2025-06-05 00:00:04] 2025-06-04 21:59:46,827 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:00:04] 2025-06-04 21:59:46,828 | INFO     | **************************************
[2025-06-05 00:00:04] 2025-06-04 21:59:46,828 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:00:04] 2025-06-04 21:59:46,828 | INFO     | **************************************
[2025-06-05 00:00:04] 2025-06-04 21:59:46,828 | INFO     | 
[2025-06-05 00:00:04] 2025-06-04 21:59:46,828 | INFO     | architecture information:
[2025-06-05 00:00:04] 2025-06-04 21:59:46,829 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:00:04] 2025-06-04 21:59:46,838 | INFO     | cat /etc/os-release:
[2025-06-05 00:00:04] NAME="CentOS Linux"
[2025-06-05 00:00:04] VERSION="7 (Core)"
[2025-06-05 00:00:04] ID="centos"
[2025-06-05 00:00:04] ID_LIKE="rhel fedora"
[2025-06-05 00:00:04] VERSION_ID="7"
[2025-06-05 00:00:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:00:04] ANSI_COLOR="0;31"
[2025-06-05 00:00:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:00:04] HOME_URL="https://www.centos.org/"
[2025-06-05 00:00:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:00:04] 
[2025-06-05 00:00:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:00:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:00:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:00:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:00:04] 
[2025-06-05 00:00:04] 2025-06-04 21:59:46,838 | INFO     | **************************************
[2025-06-05 00:00:04] 2025-06-04 21:59:47,341 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 00:00:04] 2025-06-04 21:59:47,355 | INFO     | sufficient remaining disk space (370654838784 B)
[2025-06-05 00:00:04] 2025-06-04 21:59:47,355 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:00:04] 2025-06-04 21:59:47,355 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:00:04] 2025-06-04 21:59:47,355 | INFO     | update_server=False
[2025-06-05 00:00:04] 2025-06-04 21:59:47,355 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:00:04] 2025-06-04 21:59:47,355 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:00:04] 2025-06-04 21:59:47,355 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:00:04] 2025-06-04 21:59:47,355 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:00:04] 2025-06-04 21:59:47,617 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:00:04] 2025-06-04 21:59:47,617 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:00:04] 2025-06-04 21:59:47,617 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:00:04] 2025-06-04 21:59:48,051 | INFO     | all data control threads have been joined
[2025-06-05 00:00:04] 2025-06-04 21:59:48,068 | INFO     | all job control threads have been joined
[2025-06-05 00:00:04] 2025-06-04 21:59:48,232 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:00:04] 2025-06-04 21:59:48,232 | INFO     | aborting loop
[2025-06-05 00:00:04] 2025-06-04 21:59:48,359 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:00:04] 2025-06-04 21:59:48,361 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:00:04] 2025-06-04 21:59:48,758 | INFO     | all payload control threads have been joined
[2025-06-05 00:00:04] 2025-06-04 21:59:48,817 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:00:04] 2025-06-04 21:59:48,894 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:00:04] 2025-06-04 21:59:49,055 | INFO     | [data] control thread has finished
[2025-06-05 00:00:04] 2025-06-04 21:59:49,072 | INFO     | [job] control thread has finished
[2025-06-05 00:00:04] 2025-06-04 21:59:49,199 | INFO     | [job] validate thread has finished
[2025-06-05 00:00:04] 2025-06-04 21:59:49,223 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:00:04] 2025-06-04 21:59:49,235 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:00:04] 2025-06-04 21:59:49,249 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:00:04] 2025-06-04 21:59:49,271 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:00:04] 2025-06-04 21:59:49,359 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:00:04] 2025-06-04 21:59:49,764 | INFO     | [payload] control thread has finished
[2025-06-05 00:00:04] 2025-06-04 21:59:49,808 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:00:04] 2025-06-04 21:59:51,362 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:00:04] 2025-06-04 21:59:57,791 | INFO     | job.realtimelogging is not enabled
[2025-06-05 00:00:04] 2025-06-04 21:59:58,794 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:00:04] 2025-06-04 21:59:59,223 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139733638596416)>', '<ExcThread(monitor, started 139732784764672)>']
[2025-06-05 00:00:04] 2025-06-04 21:59:59,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:00:04] 2025-06-04 21:59:59,660 | INFO     | [monitor] control thread has ended
[2025-06-05 00:00:04] 2025-06-04 22:00:04,224 | INFO     | all workflow threads have been joined
[2025-06-05 00:00:04] 2025-06-04 22:00:04,224 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:00:04] 2025-06-04 22:00:04,224 | INFO     | traces error code: 0
[2025-06-05 00:00:04] 2025-06-04 22:00:04,224 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:00:04] 2025-06-04 22:00:04,277 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:00:04] 2025-06-04 22:00:04,280 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:00:04] 2025-06-04 22:00:04,282 [wrapper] pilotpid: 300179
[2025-06-05 00:00:04] 2025-06-04 22:00:04,285 [wrapper] Pilot exit status: 0
[2025-06-05 00:00:04] 2025-06-04 22:00:04,293 [wrapper] pandaids: 6667883092
[2025-06-05 00:00:04] 2025-06-04 22:00:04,310 [wrapper] cleanup supervisor_pilot  318709 300180
[2025-06-05 00:00:04] 2025-06-04 22:00:04,313 [wrapper] Test setup, not cleaning
[2025-06-05 00:00:04] 2025-06-04 22:00:04,316 [wrapper] apfmon messages muted
[2025-06-05 00:00:04] 2025-06-04 22:00:04,318 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:00:04] 2025-06-04 22:00:04,320 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:00:04]  *** Error codes and diagnostics ***
[2025-06-05 00:00:04]     "exeErrorCode": 0,
[2025-06-05 00:00:04]     "exeErrorDiag": "",
[2025-06-05 00:00:04]     "pilotErrorCode": 0,
[2025-06-05 00:00:04]     "pilotErrorDiag": "",
[2025-06-05 00:00:04]  *** Listing of results directory ***
[2025-06-05 00:00:04] total 424184
[2025-06-05 00:00:04] -rw-r--r-- 1 boinc boinc    495897 May 28 02:38 pilot3.tar.gz
[2025-06-05 00:00:04] -rw-r--r-- 1 boinc boinc      5111 May 28 03:06 queuedata.json
[2025-06-05 00:00:04] -rwx------ 1 boinc boinc     37140 May 28 03:09 runpilot2-wrapper.sh
[2025-06-05 00:00:04] -rw-r--r-- 1 boinc boinc       100 Jun  4 22:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:00:04] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 22:16 run_atlas
[2025-06-05 00:00:04] -rw-r--r-- 1 boinc boinc       105 Jun  4 22:16 job.xml
[2025-06-05 00:00:04] -rw-r--r-- 2 boinc boinc 227146050 Jun  4 22:16 EVNT.44871834._002988.pool.root.1
[2025-06-05 00:00:04] -rw-r--r-- 1 boinc boinc      6931 Jun  4 22:16 init_data.xml
[2025-06-05 00:00:04] drwxrwx--x 2 boinc boinc      4096 Jun  4 22:16 shared
[2025-06-05 00:00:04] -rw-r--r-- 2 boinc boinc    508878 Jun  4 22:16 input.tar.gz
[2025-06-05 00:00:04] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:16 start_atlas.sh
[2025-06-05 00:00:04] -rw-r--r-- 1 boinc boinc         0 Jun  4 22:16 boinc_lockfile
[2025-06-05 00:00:04] -rw-r--r-- 1 boinc boinc      2559 Jun  4 22:16 pandaJob.out
[2025-06-05 00:00:04] -rw------- 1 boinc boinc    991007 Jun  4 22:16 agis_schedconf.cvmfs.json
[2025-06-05 00:00:04] -rw------- 1 boinc boinc   1598969 Jun  4 22:16 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:00:04] drwx------ 4 boinc boinc      4096 Jun  4 22:16 pilot3
[2025-06-05 00:00:04] -rw------- 1 boinc boinc        95 Jun  4 23:59 pilot_heartbeat.json
[2025-06-05 00:00:04] -rw------- 1 boinc boinc 201701600 Jun  4 23:59 HITS.44871837._076397.pool.root.1
[2025-06-05 00:00:04] -rw-r--r-- 1 boinc boinc       529 Jun  4 23:59 boinc_task_state.xml
[2025-06-05 00:00:04] -rw------- 1 boinc boinc      1019 Jun  4 23:59 memory_monitor_summary.json
[2025-06-05 00:00:04] -rw------- 1 boinc boinc    246342 Jun  4 23:59 log.44871837._076397.job.log.tgz.1
[2025-06-05 00:00:04] -rw------- 1 boinc boinc      7656 Jun  4 23:59 heartbeat.json
[2025-06-05 00:00:04] -rw-r--r-- 1 boinc boinc      8192 Jun  5 00:00 boinc_mmap_file
[2025-06-05 00:00:04] -rw-r--r-- 1 boinc boinc        27 Jun  5 00:00 wrapper_checkpoint.txt
[2025-06-05 00:00:04] -rw------- 1 boinc boinc      4429 Jun  5 00:00 pilotlog.txt
[2025-06-05 00:00:04] -rw------- 1 boinc boinc    590438 Jun  5 00:00 log.44871837._076397.job.log.1
[2025-06-05 00:00:04] -rw------- 1 boinc boinc       357 Jun  5 00:00 output.list
[2025-06-05 00:00:04] -rw-r--r-- 1 boinc boinc       620 Jun  5 00:00 runtime_log
[2025-06-05 00:00:04] -rw------- 1 boinc boinc    860160 Jun  5 00:00 result.tar.gz
[2025-06-05 00:00:04] -rw------- 1 boinc boinc       662 Jun  5 00:00 wugKDmZTKe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbgSKDmfvx0Lo.diag
[2025-06-05 00:00:04] -rw-r--r-- 1 boinc boinc      8748 Jun  5 00:00 runtime_log.err
[2025-06-05 00:00:04] -rw-r--r-- 1 boinc boinc     21156 Jun  5 00:00 stderr.txt
[2025-06-05 00:00:04] HITS file was successfully produced:
[2025-06-05 00:00:04] -rw------- 1 boinc boinc 201701600 Jun  4 23:59 shared/HITS.pool.root.1
[2025-06-05 00:00:04]  *** Contents of shared directory: ***
[2025-06-05 00:00:04] total 420164
[2025-06-05 00:00:04] -rw-r--r-- 2 boinc boinc 227146050 Jun  4 22:16 ATLAS.root_0
[2025-06-05 00:00:04] -rw-r--r-- 2 boinc boinc    508878 Jun  4 22:16 input.tar.gz
[2025-06-05 00:00:04] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:16 start_atlas.sh
[2025-06-05 00:00:04] -rw------- 1 boinc boinc 201701600 Jun  4 23:59 HITS.pool.root.1
[2025-06-05 00:00:04] -rw------- 1 boinc boinc    860160 Jun  5 00:00 result.tar.gz
00:00:05 (296549): run_atlas exited; CPU time 17818.189781
00:00:05 (296549): called boinc_finish(0)

</stderr_txt>
]]>

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