Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:39:28 (2256602): wrapper (7.7.26015): starting
18:39:28 (2256602): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 18:39:28] Arguments: --nthreads 4
[2025-06-06 18:39:28] Threads: 4
[2025-06-06 18:39:28] Checking for CVMFS
[2025-06-06 18:39:28] No cvmfs_config command found, will try listing directly
[2025-06-06 18:39:28] CVMFS is ok
[2025-06-06 18:39:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 18:39:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 18:39:28] Further information can be found at the LHC@home message board.
[2025-06-06 18:39:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 18:39:28] Checking for apptainer binary...
[2025-06-06 18:39:28] which: no apptainer in ((null))
[2025-06-06 18:39:28] apptainer is not installed, using version from CVMFS
[2025-06-06 18:39:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 18:39:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-06-06 18:39:28] apptainer works
[2025-06-06 18:39:28] Set ATHENA_PROC_NUMBER=4
[2025-06-06 18:39:28] Set ATHENA_CORE_NUMBER=4
[2025-06-06 18:39:28] Starting ATLAS job with PandaID=6678390270
[2025-06-06 18:39:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 20:11:11]  *** The last 200 lines of the pilot log: ***
[2025-06-06 20:11:11]  lfn=log.45006595._054721.job.log.tgz.1
[2025-06-06 20:11:11]  mtime=0
[2025-06-06 20:11:11]  protocol_id=None
[2025-06-06 20:11:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 20:11:11]  replicas=None
[2025-06-06 20:11:11]  scope=mc23_13p6TeV
[2025-06-06 20:11:11]  status=None
[2025-06-06 20:11:11]  status_code=0
[2025-06-06 20:11:11]  storage_token=
[2025-06-06 20:11:11]  surl=/scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6678390270/log.45006595._054721.job.log.tgz.1
[2025-06-06 20:11:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9e/03/log.45006595._054721.job.log.tgz.1
[2025-06-06 20:11:11]  workdir=None
[2025-06-06 20:11:11] ]
[2025-06-06 20:11:11] 2025-06-06 18:10:45,667 | INFO     | transferring file log.45006595._054721.job.log.tgz.1 from /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6678390270/log.45006595._054721.job.log.tgz.1 to /scratch/b
[2025-06-06 20:11:11] 2025-06-06 18:10:45,667 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6678390270/log.45006595._054721.job.log.tgz.1 /scratch/boinc/var/slot20/slots/0/lo
[2025-06-06 20:11:11] 2025-06-06 18:10:45,680 | INFO     | adding to output.list: log.45006595._054721.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9e/03/log.45006595._054721.job.log.tg
[2025-06-06 20:11:11] 2025-06-06 18:10:45,681 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 20:11:11] 2025-06-06 18:10:45,681 | INFO     | summary of transferred files:
[2025-06-06 20:11:11] 2025-06-06 18:10:45,681 | INFO     |  -- lfn=log.45006595._054721.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 20:11:11] 2025-06-06 18:10:45,681 | INFO     | stage-out finished correctly
[2025-06-06 20:11:11] 2025-06-06 18:10:46,198 | INFO     | monitor loop #414: job 0:6678390270 is in state 'finished'
[2025-06-06 20:11:11] 2025-06-06 18:10:46,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 20:11:11] 2025-06-06 18:10:48,701 | INFO     | monitor loop #415: job 0:6678390270 is in state 'finished'
[2025-06-06 20:11:11] 2025-06-06 18:10:48,702 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 20:11:11] 2025-06-06 18:10:48,955 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 20:11:11] 2025-06-06 18:10:49,328 | INFO     | job 6678390270 has state=finished
[2025-06-06 20:11:11] 2025-06-06 18:10:49,328 | INFO     | preparing for final server update for job 6678390270 in state='finished'
[2025-06-06 20:11:11] 2025-06-06 18:10:49,876 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-06 20:11:11] 2025-06-06 18:10:49,877 | INFO     | this job has now completed (state=finished)
[2025-06-06 20:11:11] 2025-06-06 18:10:49,877 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 20:11:11] 2025-06-06 18:10:49,877 | INFO     | log transfer has been attempted: DONE
[2025-06-06 20:11:11] 2025-06-06 18:10:49,877 | INFO     | job 6678390270 has finished - writing final server update
[2025-06-06 20:11:11] 2025-06-06 18:10:49,877 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1758296/.job.ad'
[2025-06-06 20:11:11] 2025-06-06 18:10:49,877 | INFO     | total number of processed events: 400 (read)
[2025-06-06 20:11:11] 2025-06-06 18:10:49,879 | INFO     | executing command: lscpu
[2025-06-06 20:11:11] 2025-06-06 18:10:49,917 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 20:11:11] 2025-06-06 18:10:51,204 | INFO     | monitor loop #416: job 0:6678390270 is in state 'finished'
[2025-06-06 20:11:11] 2025-06-06 18:10:51,205 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 20:11:11] 2025-06-06 18:10:52,489 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 20:11:11] 2025-06-06 18:10:52,489 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6678390270/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 20:11:11] 2025-06-06 18:10:52,490 | INFO     | extracted standard info from prmon json
[2025-06-06 20:11:11] 2025-06-06 18:10:52,491 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 20:11:11] 2025-06-06 18:10:52,491 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 20:11:11] 2025-06-06 18:10:52,491 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 20:11:11] 2025-06-06 18:10:52,491 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 20:11:11] 2025-06-06 18:10:52,492 | INFO     | fitting pss+swap vs Time
[2025-06-06 20:11:11] 2025-06-06 18:10:52,492 | INFO     | sum of square deviations: 177275882.0
[2025-06-06 20:11:11] 2025-06-06 18:10:52,493 | INFO     | sum of deviations: -18354966246.0
[2025-06-06 20:11:11] 2025-06-06 18:10:52,493 | INFO     | mean x: 1749230804.0
[2025-06-06 20:11:11] 2025-06-06 18:10:52,493 | INFO     | mean y: 2500753.5903614457
[2025-06-06 20:11:11] 2025-06-06 18:10:52,493 | INFO     | -- intersect: 181116096137.5549
[2025-06-06 20:11:11] 2025-06-06 18:10:52,493 | INFO     | intersect: 181116096137.5549
[2025-06-06 20:11:11] 2025-06-06 18:10:52,493 | INFO     | chi2: 0.05250313661081223
[2025-06-06 20:11:11] 2025-06-06 18:10:52,493 | INFO     | -- intersect: 181116096137.5549
[2025-06-06 20:11:11] 2025-06-06 18:10:52,493 | INFO     | current memory leak: -103.54 B/s (using 83 data points, chi2=0.05)
[2025-06-06 20:11:11] 2025-06-06 18:10:52,494 | INFO     | ..............................
[2025-06-06 20:11:11] 2025-06-06 18:10:52,494 | INFO     | . Timing measurements:
[2025-06-06 20:11:11] 2025-06-06 18:10:52,494 | INFO     | . get job = 0 s
[2025-06-06 20:11:11] 2025-06-06 18:10:52,494 | INFO     | . initial setup = 1 s
[2025-06-06 20:11:11] 2025-06-06 18:10:52,494 | INFO     | . payload setup = 4 s
[2025-06-06 20:11:11] 2025-06-06 18:10:52,494 | INFO     | . stage-in = 0 s
[2025-06-06 20:11:11] 2025-06-06 18:10:52,494 | INFO     | . payload execution = 5446 s
[2025-06-06 20:11:11] 2025-06-06 18:10:52,494 | INFO     | . stage-out = 0 s
[2025-06-06 20:11:11] 2025-06-06 18:10:52,494 | INFO     | . log creation = 0 s
[2025-06-06 20:11:11] 2025-06-06 18:10:52,494 | INFO     | ..............................
[2025-06-06 20:11:11] 2025-06-06 18:10:52,541 | INFO     | 
[2025-06-06 20:11:11] 2025-06-06 18:10:52,542 | INFO     | job summary report
[2025-06-06 20:11:11] 2025-06-06 18:10:52,542 | INFO     | --------------------------------------------------
[2025-06-06 20:11:11] 2025-06-06 18:10:52,542 | INFO     | PanDA job id: 6678390270
[2025-06-06 20:11:11] 2025-06-06 18:10:52,542 | INFO     | task id: 45006595
[2025-06-06 20:11:11] 2025-06-06 18:10:52,542 | INFO     | errors: (none)
[2025-06-06 20:11:11] 2025-06-06 18:10:52,542 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 20:11:11] 2025-06-06 18:10:52,542 | INFO     | pilot state: finished 
[2025-06-06 20:11:11] 2025-06-06 18:10:52,542 | INFO     | transexitcode: 0
[2025-06-06 20:11:11] 2025-06-06 18:10:52,542 | INFO     | exeerrorcode: 0
[2025-06-06 20:11:11] 2025-06-06 18:10:52,542 | INFO     | exeerrordiag: 
[2025-06-06 20:11:11] 2025-06-06 18:10:52,542 | INFO     | exitcode: 0
[2025-06-06 20:11:11] 2025-06-06 18:10:52,542 | INFO     | exitmsg: OK
[2025-06-06 20:11:11] 2025-06-06 18:10:52,542 | INFO     | cpuconsumptiontime: 20893 s
[2025-06-06 20:11:11] 2025-06-06 18:10:52,542 | INFO     | nevents: 400
[2025-06-06 20:11:11] 2025-06-06 18:10:52,542 | INFO     | neventsw: 0
[2025-06-06 20:11:11] 2025-06-06 18:10:52,542 | INFO     | pid: 2267328
[2025-06-06 20:11:11] 2025-06-06 18:10:52,542 | INFO     | pgrp: 2267328
[2025-06-06 20:11:11] 2025-06-06 18:10:52,542 | INFO     | corecount: 4
[2025-06-06 20:11:11] 2025-06-06 18:10:52,542 | INFO     | event service: False
[2025-06-06 20:11:11] 2025-06-06 18:10:52,543 | INFO     | sizes: {0: 2397353, 3: 2397559, 11: 2397587, 5454: 2424144, 5456: 2433107, 5459: 2433163, 5463: 2433461}
[2025-06-06 20:11:11] 2025-06-06 18:10:52,543 | INFO     | --------------------------------------------------
[2025-06-06 20:11:11] 2025-06-06 18:10:52,543 | INFO     | 
[2025-06-06 20:11:11] 2025-06-06 18:10:52,543 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-06-06 20:11:11] 2025-06-06 18:10:52,558 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 20:11:11] 2025-06-06 18:10:52,558 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 20:11:11] 2025-06-06 18:10:52,558 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 20:11:11] 2025-06-06 18:10:52,558 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 20:11:11] 2025-06-06 18:10:52,558 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 20:11:11] 2025-06-06 18:10:52,558 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 20:11:11] 2025-06-06 18:10:52,558 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 20:11:11] 2025-06-06 18:10:52,558 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 20:11:11] 2025-06-06 18:10:52,558 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 20:11:11] 2025-06-06 18:10:52,558 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 20:11:11] 2025-06-06 18:10:52,558 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 20:11:11] 2025-06-06 18:10:52,558 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 20:11:11] 2025-06-06 18:10:52,558 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 20:11:11] 2025-06-06 18:10:52,558 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 20:11:11] 2025-06-06 18:10:52,558 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 20:11:11] 2025-06-06 18:10:52,558 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 20:11:11] 2025-06-06 18:10:52,559 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 20:11:11] 2025-06-06 18:10:52,559 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 20:11:11] 2025-06-06 18:10:52,559 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 20:11:11] 2025-06-06 18:10:52,559 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 20:11:11] 2025-06-06 18:10:52,559 | INFO     | job 6678390270 has completed (purged errors)
[2025-06-06 20:11:11] 2025-06-06 18:10:52,559 | INFO     | overall cleanup function is called
[2025-06-06 20:11:11] 2025-06-06 18:10:52,652 | INFO     | PID=2260316 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 20:11:11] 2025-06-06 18:10:52,652 | INFO     | .. there are 4 such processes running
[2025-06-06 20:11:11] 2025-06-06 18:10:53,567 | INFO     | --- collectZombieJob: --- 10, [2267328]
[2025-06-06 20:11:11] 2025-06-06 18:10:53,567 | INFO     | zombie collector waiting for pid 2267328
[2025-06-06 20:11:11] 2025-06-06 18:10:53,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 20:11:11] 2025-06-06 18:10:53,567 | INFO     | collected zombie processes
[2025-06-06 20:11:11] 2025-06-06 18:10:53,567 | INFO     | will attempt to kill all subprocesses of pid=2267328
[2025-06-06 20:11:11] 2025-06-06 18:10:53,688 | INFO     | process IDs to be killed: [2267328] (in reverse order)
[2025-06-06 20:11:11] 2025-06-06 18:10:53,741 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 20:11:11] 2025-06-06 18:10:53,741 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 20:11:11] 2025-06-06 18:10:53,746 | INFO     | did not find any defunct processes belonging to 2267328
[2025-06-06 20:11:11] 2025-06-06 18:10:53,750 | INFO     | did not find any defunct processes belonging to 2267328
[2025-06-06 20:11:11] 2025-06-06 18:10:53,750 | INFO     | ready for new job
[2025-06-06 20:11:11] 2025-06-06 18:10:53,750 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 20:11:11] 2025-06-06 18:10:53,751 | INFO     | **************************************
[2025-06-06 20:11:11] 2025-06-06 18:10:53,751 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 20:11:11] 2025-06-06 18:10:53,751 | INFO     | **************************************
[2025-06-06 20:11:11] 2025-06-06 18:10:53,751 | INFO     | 
[2025-06-06 20:11:11] 2025-06-06 18:10:53,753 | INFO     | architecture information:
[2025-06-06 20:11:11] 2025-06-06 18:10:53,754 | INFO     | executing command: cat /etc/os-release
[2025-06-06 20:11:11] 2025-06-06 18:10:53,763 | INFO     | cat /etc/os-release:
[2025-06-06 20:11:11] NAME="CentOS Linux"
[2025-06-06 20:11:11] VERSION="7 (Core)"
[2025-06-06 20:11:11] ID="centos"
[2025-06-06 20:11:11] ID_LIKE="rhel fedora"
[2025-06-06 20:11:11] VERSION_ID="7"
[2025-06-06 20:11:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 20:11:11] ANSI_COLOR="0;31"
[2025-06-06 20:11:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 20:11:11] HOME_URL="https://www.centos.org/"
[2025-06-06 20:11:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 20:11:11] 
[2025-06-06 20:11:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 20:11:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 20:11:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 20:11:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 20:11:11] 
[2025-06-06 20:11:11] 2025-06-06 18:10:53,763 | INFO     | **************************************
[2025-06-06 20:11:11] 2025-06-06 18:10:54,266 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-06-06 20:11:11] 2025-06-06 18:10:54,277 | INFO     | sufficient remaining disk space (714639147008 B)
[2025-06-06 20:11:11] 2025-06-06 18:10:54,277 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 20:11:11] 2025-06-06 18:10:54,277 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 20:11:11] 2025-06-06 18:10:54,278 | INFO     | update_server=False
[2025-06-06 20:11:11] 2025-06-06 18:10:54,278 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 20:11:11] 2025-06-06 18:10:54,278 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 20:11:11] 2025-06-06 18:10:54,278 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 20:11:11] 2025-06-06 18:10:54,658 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 20:11:11] 2025-06-06 18:10:54,658 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 20:11:11] 2025-06-06 18:10:54,658 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 20:11:11] 2025-06-06 18:10:54,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 20:11:11] 2025-06-06 18:10:54,713 | INFO     | aborting loop
[2025-06-06 20:11:11] 2025-06-06 18:10:55,018 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 20:11:11] 2025-06-06 18:10:55,253 | INFO     | all data control threads have been joined
[2025-06-06 20:11:11] 2025-06-06 18:10:55,283 | INFO     | [job] retrieve thread has finished
[2025-06-06 20:11:11] 2025-06-06 18:10:55,283 | INFO     | [job] queue monitor thread has finished
[2025-06-06 20:11:11] 2025-06-06 18:10:55,404 | INFO     | all job control threads have been joined
[2025-06-06 20:11:11] 2025-06-06 18:10:55,511 | INFO     | [job] validate thread has finished
[2025-06-06 20:11:11] 2025-06-06 18:10:55,690 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 20:11:11] 2025-06-06 18:10:55,690 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 20:11:11] 2025-06-06 18:10:55,704 | INFO     | all payload control threads have been joined
[2025-06-06 20:11:11] 2025-06-06 18:10:55,718 | INFO     | [job] job monitor thread has finished
[2025-06-06 20:11:11] 2025-06-06 18:10:55,782 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 20:11:11] 2025-06-06 18:10:56,001 | INFO     | [data] copytool_in thread has finished
[2025-06-06 20:11:11] 2025-06-06 18:10:56,117 | INFO     | [payload] failed_post thread has finished
[2025-06-06 20:11:11] 2025-06-06 18:10:56,258 | INFO     | [data] control thread has finished
[2025-06-06 20:11:11] 2025-06-06 18:10:56,284 | INFO     | [data] copytool_out thread has finished
[2025-06-06 20:11:11] 2025-06-06 18:10:56,410 | INFO     | [job] control thread has finished
[2025-06-06 20:11:11] 2025-06-06 18:10:56,529 | INFO     | [payload] validate_post thread has finished
[2025-06-06 20:11:11] 2025-06-06 18:10:56,709 | INFO     | [payload] control thread has finished
[2025-06-06 20:11:11] 2025-06-06 18:10:59,024 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 20:11:11] 2025-06-06 18:11:04,440 | INFO     | job.realtimelogging is not enabled
[2025-06-06 20:11:11] 2025-06-06 18:11:05,446 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 20:11:11] 2025-06-06 18:11:06,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23115286644544)>', '<ExcThread(monitor, started 23115050485504)>']
[2025-06-06 20:11:11] 2025-06-06 18:11:06,719 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 20:11:11] 2025-06-06 18:11:06,720 | INFO     | [monitor] control thread has ended
[2025-06-06 20:11:11] 2025-06-06 18:11:11,060 | INFO     | all workflow threads have been joined
[2025-06-06 20:11:11] 2025-06-06 18:11:11,061 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 20:11:11] 2025-06-06 18:11:11,061 | INFO     | traces error code: 0
[2025-06-06 20:11:11] 2025-06-06 18:11:11,061 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 20:11:11] 2025-06-06 18:11:11,139 [wrapper] ==== pilot stdout END ====
[2025-06-06 20:11:11] 2025-06-06 18:11:11,141 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 20:11:11] 2025-06-06 18:11:11,143 [wrapper] pilotpid: 2260316
[2025-06-06 20:11:11] 2025-06-06 18:11:11,145 [wrapper] Pilot exit status: 0
[2025-06-06 20:11:11] 2025-06-06 18:11:11,153 [wrapper] pandaids: 6678390270
[2025-06-06 20:11:11] 2025-06-06 18:11:11,186 [wrapper] cleanup supervisor_pilot 2394126 2260317
[2025-06-06 20:11:11] 2025-06-06 18:11:11,188 [wrapper] Test setup, not cleaning
[2025-06-06 20:11:11] 2025-06-06 18:11:11,190 [wrapper] apfmon messages muted
[2025-06-06 20:11:11] 2025-06-06 18:11:11,191 [wrapper] ==== wrapper stdout END ====
[2025-06-06 20:11:11] 2025-06-06 18:11:11,193 [wrapper] ==== wrapper stderr END ====
[2025-06-06 20:11:11]  *** Error codes and diagnostics ***
[2025-06-06 20:11:11]     "exeErrorCode": 0,
[2025-06-06 20:11:11]     "exeErrorDiag": "",
[2025-06-06 20:11:11]     "pilotErrorCode": 0,
[2025-06-06 20:11:11]     "pilotErrorDiag": "",
[2025-06-06 20:11:11]  *** Listing of results directory ***
[2025-06-06 20:11:11] total 398512
[2025-06-06 20:11:11] -rw-r--r-- 1 boinc boinc    495897 Jun  4 09:04 pilot3.tar.gz
[2025-06-06 20:11:11] -rw-r--r-- 1 boinc boinc      5111 Jun  4 09:22 queuedata.json
[2025-06-06 20:11:11] -rwx------ 1 boinc boinc     37140 Jun  4 09:22 runpilot2-wrapper.sh
[2025-06-06 20:11:11] -rw-r--r-- 1 boinc boinc       100 Jun  6 18:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 20:11:11] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 18:39 run_atlas
[2025-06-06 20:11:11] -rw-r--r-- 1 boinc boinc       105 Jun  6 18:39 job.xml
[2025-06-06 20:11:11] -rw-r--r-- 1 boinc boinc      6634 Jun  6 18:39 init_data.xml
[2025-06-06 20:11:11] -rw-r--r-- 2 boinc boinc 218217604 Jun  6 18:39 EVNT.45006593._002189.pool.root.1
[2025-06-06 20:11:11] drwxrwx--x 2 boinc boinc      4096 Jun  6 18:39 shared
[2025-06-06 20:11:11] -rw-r--r-- 2 boinc boinc    508880 Jun  6 18:39 input.tar.gz
[2025-06-06 20:11:11] -rw-r--r-- 2 boinc boinc     15093 Jun  6 18:39 start_atlas.sh
[2025-06-06 20:11:11] -rw-r--r-- 1 boinc boinc         0 Jun  6 18:39 boinc_lockfile
[2025-06-06 20:11:11] -rw-r--r-- 1 boinc boinc      2525 Jun  6 18:39 pandaJob.out
[2025-06-06 20:11:11] -rw------- 1 boinc boinc    985748 Jun  6 18:39 agis_schedconf.cvmfs.json
[2025-06-06 20:11:11] -rw------- 1 boinc boinc   1598969 Jun  6 18:39 agis_ddmendpoints.agis.ALL.json
[2025-06-06 20:11:11] drwx------ 4 boinc boinc      4096 Jun  6 18:39 pilot3
[2025-06-06 20:11:11] -rw------- 1 boinc boinc 184410022 Jun  6 20:10 HITS.45006595._054721.pool.root.1
[2025-06-06 20:11:11] -rw-r--r-- 1 boinc boinc       530 Jun  6 20:10 boinc_task_state.xml
[2025-06-06 20:11:11] -rw------- 1 boinc boinc        95 Jun  6 20:10 pilot_heartbeat.json
[2025-06-06 20:11:11] -rw------- 1 boinc boinc      1029 Jun  6 20:10 memory_monitor_summary.json
[2025-06-06 20:11:11] -rw------- 1 boinc boinc    263899 Jun  6 20:10 log.45006595._054721.job.log.tgz.1
[2025-06-06 20:11:11] -rw------- 1 boinc boinc      7723 Jun  6 20:10 heartbeat.json
[2025-06-06 20:11:11] -rw-r--r-- 1 boinc boinc        27 Jun  6 20:10 wrapper_checkpoint.txt
[2025-06-06 20:11:11] -rw-r--r-- 1 boinc boinc      8192 Jun  6 20:10 boinc_mmap_file
[2025-06-06 20:11:11] -rw------- 1 boinc boinc      4435 Jun  6 20:11 pilotlog.txt
[2025-06-06 20:11:11] -rw------- 1 boinc boinc    547083 Jun  6 20:11 log.45006595._054721.job.log.1
[2025-06-06 20:11:11] -rw------- 1 boinc boinc       357 Jun  6 20:11 output.list
[2025-06-06 20:11:11] -rw-r--r-- 1 boinc boinc       620 Jun  6 20:11 runtime_log
[2025-06-06 20:11:11] -rw------- 1 boinc boinc    829440 Jun  6 20:11 result.tar.gz
[2025-06-06 20:11:11] -rw-r--r-- 1 boinc boinc      9025 Jun  6 20:11 runtime_log.err
[2025-06-06 20:11:11] -rw------- 1 boinc boinc       660 Jun  6 20:11 9XMKDmIdxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRbnKDmEXTn2m.diag
[2025-06-06 20:11:11] -rw-r--r-- 1 boinc boinc     21477 Jun  6 20:11 stderr.txt
[2025-06-06 20:11:11] HITS file was successfully produced:
[2025-06-06 20:11:11] -rw------- 1 boinc boinc 184410022 Jun  6 20:10 shared/HITS.pool.root.1
[2025-06-06 20:11:11]  *** Contents of shared directory: ***
[2025-06-06 20:11:11] total 394524
[2025-06-06 20:11:11] -rw-r--r-- 2 boinc boinc 218217604 Jun  6 18:39 ATLAS.root_0
[2025-06-06 20:11:11] -rw-r--r-- 2 boinc boinc    508880 Jun  6 18:39 input.tar.gz
[2025-06-06 20:11:11] -rw-r--r-- 2 boinc boinc     15093 Jun  6 18:39 start_atlas.sh
[2025-06-06 20:11:11] -rw------- 1 boinc boinc 184410022 Jun  6 20:10 HITS.pool.root.1
[2025-06-06 20:11:11] -rw------- 1 boinc boinc    829440 Jun  6 20:11 result.tar.gz
20:11:12 (2256602): run_atlas exited; CPU time 20979.717121
20:11:12 (2256602): called boinc_finish(0)

</stderr_txt>
]]>

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