Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:19:54 (4042195): wrapper (7.7.26015): starting
08:19:54 (4042195): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 08:19:54] Arguments: --nthreads 12
[2025-06-04 08:19:54] Threads: 12
[2025-06-04 08:19:54] Checking for CVMFS
[2025-06-04 08:19:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:19:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:19:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:19:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:19:55] 2.12.6.0 5109 31495 438956 146780 3 67 18959818 32935936 4963 16776704 0 124484931 99.669 110756739 32500 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:19:55] CVMFS is ok
[2025-06-04 08:19:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:19:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:19:55] Further information can be found at the LHC@home message board.
[2025-06-04 08:19:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:19:55] Checking for apptainer binary...
[2025-06-04 08:19:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:19:55] Running /usr/bin/apptainer --version
[2025-06-04 08:19:55] apptainer version 1.4.1-1.el9
[2025-06-04 08:19:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:19:55] c6-2-29-2.aglt2.org
[2025-06-04 08:19:55] apptainer works
[2025-06-04 08:19:55] Set ATHENA_PROC_NUMBER=12
[2025-06-04 08:19:55] Set ATHENA_CORE_NUMBER=12
[2025-06-04 08:19:55] Starting ATLAS job with PandaID=6667923444
[2025-06-04 08:19:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:16:03]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:16:03]  is_altstaged=None
[2025-06-04 09:16:03]  is_tar=False
[2025-06-04 09:16:03]  lfn=log.44871837._077996.job.log.tgz.1
[2025-06-04 09:16:03]  mtime=0
[2025-06-04 09:16:03]  protocol_id=None
[2025-06-04 09:16:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:16:03]  replicas=None
[2025-06-04 09:16:03]  scope=mc23_13p6TeV
[2025-06-04 09:16:03]  status=None
[2025-06-04 09:16:03]  status_code=0
[2025-06-04 09:16:03]  storage_token=
[2025-06-04 09:16:03]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667923444/log.44871837._077996.job.log.tgz.1
[2025-06-04 09:16:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/82/log.44871837._077996.job.log.tgz.1
[2025-06-04 09:16:03]  workdir=None
[2025-06-04 09:16:03] ]
[2025-06-04 09:16:03] 2025-06-04 13:15:40,472 | INFO     | transferring file log.44871837._077996.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667923444/log.44871837._077996.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:16:03] 2025-06-04 13:15:40,472 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667923444/log.44871837._077996.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._077996.job
[2025-06-04 09:16:03] 2025-06-04 13:15:40,484 | INFO     | adding to output.list: log.44871837._077996.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/82/log.44871837._077996.job.log.tg
[2025-06-04 09:16:03] 2025-06-04 13:15:40,485 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:16:03] 2025-06-04 13:15:40,485 | INFO     | summary of transferred files:
[2025-06-04 09:16:03] 2025-06-04 13:15:40,485 | INFO     |  -- lfn=log.44871837._077996.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:16:03] 2025-06-04 13:15:40,485 | INFO     | stage-out finished correctly
[2025-06-04 09:16:03] 2025-06-04 13:15:41,070 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:16:03] 2025-06-04 13:15:41,149 | INFO     | job 6667923444 has state=finished
[2025-06-04 09:16:03] 2025-06-04 13:15:41,150 | INFO     | preparing for final server update for job 6667923444 in state='finished'
[2025-06-04 09:16:03] 2025-06-04 13:15:41,150 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:16:03] 2025-06-04 13:15:41,150 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:16:03] 2025-06-04 13:15:41,150 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:16:03] 2025-06-04 13:15:41,150 | INFO     | job 6667923444 has finished - writing final server update
[2025-06-04 09:16:03] 2025-06-04 13:15:41,150 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:16:03] 2025-06-04 13:15:41,164 | INFO     | executing command: lscpu
[2025-06-04 09:16:03] 2025-06-04 13:15:41,222 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:16:03] 2025-06-04 13:15:43,768 | WARNING  | process 4053055 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 09:16:03] 2025-06-04 13:15:43,768 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667923444/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:16:03] 2025-06-04 13:15:43,780 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:16:03] 2025-06-04 13:15:43,780 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667923444/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:16:03] 2025-06-04 13:15:43,781 | INFO     | extracted standard info from prmon json
[2025-06-04 09:16:03] 2025-06-04 13:15:43,781 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:16:03] 2025-06-04 13:15:43,781 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:16:03] 2025-06-04 13:15:43,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:16:03] 2025-06-04 13:15:43,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:16:03] 2025-06-04 13:15:43,782 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:16:03] 2025-06-04 13:15:43,782 | INFO     | sum of square deviations: 34277852.0
[2025-06-04 09:16:03] 2025-06-04 13:15:43,782 | INFO     | sum of deviations: 6679432473.0
[2025-06-04 09:16:03] 2025-06-04 13:15:43,782 | INFO     | mean x: 1749041362.5
[2025-06-04 09:16:03] 2025-06-04 13:15:43,783 | INFO     | mean y: 2732018.6666666665
[2025-06-04 09:16:03] 2025-06-04 13:15:43,783 | INFO     | -- intersect: -340818031000.6341
[2025-06-04 09:16:03] 2025-06-04 13:15:43,783 | INFO     | intersect: -340818031000.6341
[2025-06-04 09:16:03] 2025-06-04 13:15:43,783 | INFO     | chi2: 0.6728972750816642
[2025-06-04 09:16:03] 2025-06-04 13:15:43,783 | INFO     | -- intersect: -340818031000.6341
[2025-06-04 09:16:03] 2025-06-04 13:15:43,783 | INFO     | current memory leak: 194.86 B/s (using 48 data points, chi2=0.67)
[2025-06-04 09:16:03] 2025-06-04 13:15:43,783 | INFO     | ..............................
[2025-06-04 09:16:03] 2025-06-04 13:15:43,784 | INFO     | . Timing measurements:
[2025-06-04 09:16:03] 2025-06-04 13:15:43,784 | INFO     | . get job = 0 s
[2025-06-04 09:16:03] 2025-06-04 13:15:43,784 | INFO     | . initial setup = 2 s
[2025-06-04 09:16:03] 2025-06-04 13:15:43,784 | INFO     | . payload setup = 4 s
[2025-06-04 09:16:03] 2025-06-04 13:15:43,784 | INFO     | . stage-in = 0 s
[2025-06-04 09:16:03] 2025-06-04 13:15:43,784 | INFO     | . payload execution = 3315 s
[2025-06-04 09:16:03] 2025-06-04 13:15:43,784 | INFO     | . stage-out = 0 s
[2025-06-04 09:16:03] 2025-06-04 13:15:43,784 | INFO     | . log creation = 0 s
[2025-06-04 09:16:03] 2025-06-04 13:15:43,784 | INFO     | ..............................
[2025-06-04 09:16:03] 2025-06-04 13:15:43,947 | INFO     | number of running child processes to parent process 4053055: 1
[2025-06-04 09:16:03] 2025-06-04 13:15:43,947 | INFO     | maximum number of monitored processes: 6
[2025-06-04 09:16:03] 2025-06-04 13:15:43,947 | INFO     | aborting job monitoring since job object (job id=6667923444) has expired
[2025-06-04 09:16:03] 2025-06-04 13:15:44,257 | INFO     | 
[2025-06-04 09:16:03] 2025-06-04 13:15:44,257 | INFO     | job summary report
[2025-06-04 09:16:03] 2025-06-04 13:15:44,257 | INFO     | --------------------------------------------------
[2025-06-04 09:16:03] 2025-06-04 13:15:44,257 | INFO     | PanDA job id: 6667923444
[2025-06-04 09:16:03] 2025-06-04 13:15:44,257 | INFO     | task id: 44871837
[2025-06-04 09:16:03] 2025-06-04 13:15:44,257 | INFO     | errors: (none)
[2025-06-04 09:16:03] 2025-06-04 13:15:44,258 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:16:03] 2025-06-04 13:15:44,258 | INFO     | pilot state: finished 
[2025-06-04 09:16:03] 2025-06-04 13:15:44,258 | INFO     | transexitcode: 0
[2025-06-04 09:16:03] 2025-06-04 13:15:44,258 | INFO     | exeerrorcode: 0
[2025-06-04 09:16:03] 2025-06-04 13:15:44,258 | INFO     | exeerrordiag: 
[2025-06-04 09:16:03] 2025-06-04 13:15:44,258 | INFO     | exitcode: 0
[2025-06-04 09:16:03] 2025-06-04 13:15:44,258 | INFO     | exitmsg: OK
[2025-06-04 09:16:03] 2025-06-04 13:15:44,258 | INFO     | cpuconsumptiontime: 32459 s
[2025-06-04 09:16:03] 2025-06-04 13:15:44,258 | INFO     | nevents: 400
[2025-06-04 09:16:03] 2025-06-04 13:15:44,258 | INFO     | neventsw: 0
[2025-06-04 09:16:03] 2025-06-04 13:15:44,258 | INFO     | pid: 4053055
[2025-06-04 09:16:03] 2025-06-04 13:15:44,258 | INFO     | pgrp: 4053055
[2025-06-04 09:16:03] 2025-06-04 13:15:44,258 | INFO     | corecount: 12
[2025-06-04 09:16:03] 2025-06-04 13:15:44,258 | INFO     | event service: False
[2025-06-04 09:16:03] 2025-06-04 13:15:44,259 | INFO     | sizes: {0: 2397165, 1: 2397420, 3: 2397626, 11: 2397654, 3323: 2423223, 3324: 2432347, 3325: 2432347, 3328: 2432517}
[2025-06-04 09:16:03] 2025-06-04 13:15:44,259 | INFO     | --------------------------------------------------
[2025-06-04 09:16:03] 2025-06-04 13:15:44,259 | INFO     | 
[2025-06-04 09:16:03] 2025-06-04 13:15:44,259 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 09:16:03] 2025-06-04 13:15:44,272 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:16:03] 2025-06-04 13:15:44,273 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:16:03] 2025-06-04 13:15:44,273 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:16:03] 2025-06-04 13:15:44,273 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:16:03] 2025-06-04 13:15:44,273 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:16:03] 2025-06-04 13:15:44,273 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:16:03] 2025-06-04 13:15:44,273 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:16:03] 2025-06-04 13:15:44,273 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:16:03] 2025-06-04 13:15:44,273 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:16:03] 2025-06-04 13:15:44,273 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:16:03] 2025-06-04 13:15:44,273 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:16:03] 2025-06-04 13:15:44,273 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:16:03] 2025-06-04 13:15:44,273 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:16:03] 2025-06-04 13:15:44,273 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:16:03] 2025-06-04 13:15:44,273 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:16:03] 2025-06-04 13:15:44,273 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:16:03] 2025-06-04 13:15:44,273 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:16:03] 2025-06-04 13:15:44,273 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:16:03] 2025-06-04 13:15:44,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:16:03] 2025-06-04 13:15:44,273 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:16:03] 2025-06-04 13:15:44,274 | INFO     | job 6667923444 has completed (purged errors)
[2025-06-04 09:16:03] 2025-06-04 13:15:44,274 | INFO     | overall cleanup function is called
[2025-06-04 09:16:03] 2025-06-04 13:15:45,280 | INFO     | --- collectZombieJob: --- 10, [4053055]
[2025-06-04 09:16:03] 2025-06-04 13:15:45,281 | INFO     | zombie collector waiting for pid 4053055
[2025-06-04 09:16:03] 2025-06-04 13:15:45,281 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:16:03] 2025-06-04 13:15:45,281 | INFO     | collected zombie processes
[2025-06-04 09:16:03] 2025-06-04 13:15:45,281 | INFO     | will attempt to kill all subprocesses of pid=4053055
[2025-06-04 09:16:03] 2025-06-04 13:15:45,407 | INFO     | process IDs to be killed: [4053055] (in reverse order)
[2025-06-04 09:16:03] 2025-06-04 13:15:45,457 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:16:03] 2025-06-04 13:15:45,457 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:16:03] 2025-06-04 13:15:45,463 | INFO     | did not find any defunct processes belonging to 4053055
[2025-06-04 09:16:03] 2025-06-04 13:15:45,469 | INFO     | did not find any defunct processes belonging to 4053055
[2025-06-04 09:16:03] 2025-06-04 13:15:45,469 | INFO     | ready for new job
[2025-06-04 09:16:03] 2025-06-04 13:15:45,469 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:16:03] 2025-06-04 13:15:45,470 | INFO     | **************************************
[2025-06-04 09:16:03] 2025-06-04 13:15:45,470 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:16:03] 2025-06-04 13:15:45,470 | INFO     | **************************************
[2025-06-04 09:16:03] 2025-06-04 13:15:45,470 | INFO     | 
[2025-06-04 09:16:03] 2025-06-04 13:15:45,485 | INFO     | architecture information:
[2025-06-04 09:16:03] 2025-06-04 13:15:45,485 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:16:03] 2025-06-04 13:15:45,494 | INFO     | cat /etc/os-release:
[2025-06-04 09:16:03] NAME="CentOS Linux"
[2025-06-04 09:16:03] VERSION="7 (Core)"
[2025-06-04 09:16:03] ID="centos"
[2025-06-04 09:16:03] ID_LIKE="rhel fedora"
[2025-06-04 09:16:03] VERSION_ID="7"
[2025-06-04 09:16:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:16:03] ANSI_COLOR="0;31"
[2025-06-04 09:16:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:16:03] HOME_URL="https://www.centos.org/"
[2025-06-04 09:16:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:16:03] 
[2025-06-04 09:16:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:16:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:16:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:16:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:16:03] 
[2025-06-04 09:16:03] 2025-06-04 13:15:45,494 | INFO     | **************************************
[2025-06-04 09:16:03] 2025-06-04 13:15:45,996 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 09:16:03] 2025-06-04 13:15:46,007 | INFO     | sufficient remaining disk space (76231475200 B)
[2025-06-04 09:16:03] 2025-06-04 13:15:46,008 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:16:03] 2025-06-04 13:15:46,008 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:16:03] 2025-06-04 13:15:46,008 | INFO     | update_server=False
[2025-06-04 09:16:03] 2025-06-04 13:15:46,008 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:16:03] 2025-06-04 13:15:46,008 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:16:03] 2025-06-04 13:15:46,008 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:16:03] 2025-06-04 13:15:46,008 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:16:03] 2025-06-04 13:15:46,008 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:16:03] 2025-06-04 13:15:46,036 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:16:03] 2025-06-04 13:15:46,056 | INFO     | all data control threads have been joined
[2025-06-04 09:16:03] 2025-06-04 13:15:46,450 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 09:16:03] 2025-06-04 13:15:46,450 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 09:16:03] 2025-06-04 13:15:46,450 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:16:03] 2025-06-04 13:15:46,451 | INFO     | will abort loop
[2025-06-04 09:16:03] 2025-06-04 13:15:47,012 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:16:03] 2025-06-04 13:15:47,014 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:16:03] 2025-06-04 13:15:47,062 | INFO     | [data] control thread has finished
[2025-06-04 09:16:03] 2025-06-04 13:15:47,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:16:03] 2025-06-04 13:15:47,257 | INFO     | all payload control threads have been joined
[2025-06-04 09:16:03] 2025-06-04 13:15:47,391 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:16:03] 2025-06-04 13:15:47,456 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:16:03] 2025-06-04 13:15:47,605 | INFO     | all job control threads have been joined
[2025-06-04 09:16:03] 2025-06-04 13:15:48,007 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:16:03] 2025-06-04 13:15:48,040 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:16:03] 2025-06-04 13:15:48,042 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:16:03] 2025-06-04 13:15:48,171 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:16:03] 2025-06-04 13:15:48,263 | INFO     | [payload] control thread has finished
[2025-06-04 09:16:03] 2025-06-04 13:15:48,297 | INFO     | [job] validate thread has finished
[2025-06-04 09:16:03] 2025-06-04 13:15:48,457 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:16:03] 2025-06-04 13:15:48,610 | INFO     | [job] control thread has finished
[2025-06-04 09:16:03] 2025-06-04 13:15:48,841 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:16:03] 2025-06-04 13:15:49,842 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:16:03] 2025-06-04 13:15:51,161 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:16:03] 2025-06-04 13:15:56,235 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:16:03] 2025-06-04 13:15:57,241 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:16:03] 2025-06-04 13:15:58,555 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140274593896256)>', '<ExcThread(monitor, started 140273833211648)>']
[2025-06-04 09:16:03] 2025-06-04 13:15:59,065 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:16:03] 2025-06-04 13:15:59,065 | INFO     | [monitor] control thread has ended
[2025-06-04 09:16:03] 2025-06-04 13:16:03,571 | INFO     | all workflow threads have been joined
[2025-06-04 09:16:03] 2025-06-04 13:16:03,571 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:16:03] 2025-06-04 13:16:03,572 | INFO     | traces error code: 0
[2025-06-04 09:16:03] 2025-06-04 13:16:03,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:16:03] 2025-06-04 13:16:03,674 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:16:03] 2025-06-04 13:16:03,676 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:16:03] 2025-06-04 13:16:03,678 [wrapper] pilotpid: 4045844
[2025-06-04 09:16:03] 2025-06-04 13:16:03,679 [wrapper] Pilot exit status: 0
[2025-06-04 09:16:03] 2025-06-04 13:16:03,687 [wrapper] pandaids: 6667923444
[2025-06-04 09:16:03] 2025-06-04 13:16:03,722 [wrapper] cleanup supervisor_pilot 4163207 4045845
[2025-06-04 09:16:03] 2025-06-04 13:16:03,724 [wrapper] Test setup, not cleaning
[2025-06-04 09:16:03] 2025-06-04 13:16:03,726 [wrapper] apfmon messages muted
[2025-06-04 09:16:03] 2025-06-04 13:16:03,728 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:16:03] 2025-06-04 13:16:03,729 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:16:03]  *** Error codes and diagnostics ***
[2025-06-04 09:16:03]     "exeErrorCode": 0,
[2025-06-04 09:16:03]     "exeErrorDiag": "",
[2025-06-04 09:16:03]     "pilotErrorCode": 0,
[2025-06-04 09:16:03]     "pilotErrorDiag": "",
[2025-06-04 09:16:03]  *** Listing of results directory ***
[2025-06-04 09:16:03] total 422288
[2025-06-04 09:16:03] -rw-r--r--. 1 boincer umatlas    495897 May 27 22:39 pilot3.tar.gz
[2025-06-04 09:16:03] -rw-r--r--. 1 boincer umatlas      5111 May 27 23:10 queuedata.json
[2025-06-04 09:16:03] -rwx------. 1 boincer umatlas     37140 May 27 23:12 runpilot2-wrapper.sh
[2025-06-04 09:16:03] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:16:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:19 run_atlas
[2025-06-04 09:16:03] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:19 job.xml
[2025-06-04 09:16:03] -rw-r--r--. 2 boincer umatlas 226279075 Jun  4 08:19 EVNT.44871834._003049.pool.root.1
[2025-06-04 09:16:03] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:19 start_atlas.sh
[2025-06-04 09:16:03] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:19 shared
[2025-06-04 09:16:03] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 08:19 input.tar.gz
[2025-06-04 09:16:03] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:19 boinc_lockfile
[2025-06-04 09:16:03] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 08:19 pandaJob.out
[2025-06-04 09:16:03] -rw-------. 1 boincer umatlas    986811 Jun  4 08:20 agis_schedconf.cvmfs.json
[2025-06-04 09:16:03] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:20 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:16:03] drwx------. 4 boincer umatlas      4096 Jun  4 08:20 pilot3
[2025-06-04 09:16:03] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 09:11 init_data.xml
[2025-06-04 09:16:03] -rw-------. 1 boincer umatlas        95 Jun  4 09:14 pilot_heartbeat.json
[2025-06-04 09:16:03] -rw-------. 1 boincer umatlas 200938172 Jun  4 09:15 HITS.44871837._077996.pool.root.1
[2025-06-04 09:16:03] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:15 boinc_task_state.xml
[2025-06-04 09:16:03] -rw-------. 1 boincer umatlas      1026 Jun  4 09:15 memory_monitor_summary.json
[2025-06-04 09:16:03] -rw-------. 1 boincer umatlas    343108 Jun  4 09:15 log.44871837._077996.job.log.tgz.1
[2025-06-04 09:16:03] -rw-------. 1 boincer umatlas      7708 Jun  4 09:15 heartbeat.json
[2025-06-04 09:16:03] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:15 boinc_mmap_file
[2025-06-04 09:16:03] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:15 wrapper_checkpoint.txt
[2025-06-04 09:16:03] -rw-------. 1 boincer umatlas      4734 Jun  4 09:16 pilotlog.txt
[2025-06-04 09:16:03] -rw-------. 1 boincer umatlas    345780 Jun  4 09:16 log.44871837._077996.job.log.1
[2025-06-04 09:16:03] -rw-------. 1 boincer umatlas       357 Jun  4 09:16 output.list
[2025-06-04 09:16:03] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:16 runtime_log
[2025-06-04 09:16:03] -rw-------. 1 boincer umatlas    706560 Jun  4 09:16 result.tar.gz
[2025-06-04 09:16:03] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 09:16 runtime_log.err
[2025-06-04 09:16:03] -rw-------. 1 boincer umatlas       651 Jun  4 09:16 6vaKDmUOMe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmB9aKDmhZImxm.diag
[2025-06-04 09:16:03] -rw-r--r--. 1 boincer umatlas     21412 Jun  4 09:16 stderr.txt
[2025-06-04 09:16:03] HITS file was successfully produced:
[2025-06-04 09:16:03] -rw-------. 1 boincer umatlas 200938172 Jun  4 09:15 shared/HITS.pool.root.1
[2025-06-04 09:16:03]  *** Contents of shared directory: ***
[2025-06-04 09:16:03] total 418420
[2025-06-04 09:16:03] -rw-r--r--. 2 boincer umatlas 226279075 Jun  4 08:19 ATLAS.root_0
[2025-06-04 09:16:03] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:19 start_atlas.sh
[2025-06-04 09:16:03] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 08:19 input.tar.gz
[2025-06-04 09:16:03] -rw-------. 1 boincer umatlas 200938172 Jun  4 09:15 HITS.pool.root.1
[2025-06-04 09:16:03] -rw-------. 1 boincer umatlas    706560 Jun  4 09:16 result.tar.gz
09:16:05 (4042195): run_atlas exited; CPU time 32513.018121
09:16:05 (4042195): called boinc_finish(0)

</stderr_txt>
]]>

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