Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:28:50 (1336265): wrapper (7.7.26015): starting
22:28:50 (1336265): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 22:28:50] Arguments: --nthreads 3
[2025-06-04 22:28:50] Threads: 3
[2025-06-04 22:28:50] Checking for CVMFS
[2025-06-04 22:28:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:28:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:28:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:28:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:28:50] 2.9.2.0 324089 3009 83656 146793 3 55 32658324 36864001 0 130560 0 2734538 99.993 686042 53555 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 22:28:50] CVMFS is ok
[2025-06-04 22:28:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:28:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:28:50] Further information can be found at the LHC@home message board.
[2025-06-04 22:28:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:28:50] Checking for apptainer binary...
[2025-06-04 22:28:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:28:50] Running /usr/bin/apptainer --version
[2025-06-04 22:28:50] apptainer version 1.3.6-6.1
[2025-06-04 22:28:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:28:50] thA349
[2025-06-04 22:28:50] apptainer works
[2025-06-04 22:28:50] Set ATHENA_PROC_NUMBER=3
[2025-06-04 22:28:50] Set ATHENA_CORE_NUMBER=3
[2025-06-04 22:28:50] Starting ATLAS job with PandaID=6677920677
[2025-06-04 22:28:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:41:44]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:41:44]  is_tar=False
[2025-06-04 23:41:44]  lfn=log.45006595._042229.job.log.tgz.1
[2025-06-04 23:41:44]  mtime=0
[2025-06-04 23:41:44]  protocol_id=None
[2025-06-04 23:41:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 23:41:44]  replicas=None
[2025-06-04 23:41:44]  scope=mc23_13p6TeV
[2025-06-04 23:41:44]  status=None
[2025-06-04 23:41:44]  status_code=0
[2025-06-04 23:41:44]  storage_token=
[2025-06-04 23:41:44]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677920677/log.45006595._042229.job.log.tgz.1
[2025-06-04 23:41:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/ed/log.45006595._042229.job.log.tgz.1
[2025-06-04 23:41:44]  workdir=None
[2025-06-04 23:41:44] ]
[2025-06-04 23:41:44] 2025-06-04 21:41:27,537 | INFO     | transferring file log.45006595._042229.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677920677/log.45006595._042229.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 23:41:44] 2025-06-04 21:41:27,537 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677920677/log.45006595._042229.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0422
[2025-06-04 23:41:44] 2025-06-04 21:41:27,552 | INFO     | adding to output.list: log.45006595._042229.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/ed/log.45006595._042229.job.log.tg
[2025-06-04 23:41:44] 2025-06-04 21:41:27,552 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 23:41:44] 2025-06-04 21:41:27,552 | INFO     | summary of transferred files:
[2025-06-04 23:41:44] 2025-06-04 21:41:27,552 | INFO     |  -- lfn=log.45006595._042229.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 23:41:44] 2025-06-04 21:41:27,552 | INFO     | stage-out finished correctly
[2025-06-04 23:41:44] 2025-06-04 21:41:28,333 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 23:41:44] 2025-06-04 21:41:28,413 | INFO     | job 6677920677 has state=finished
[2025-06-04 23:41:44] 2025-06-04 21:41:28,413 | INFO     | preparing for final server update for job 6677920677 in state='finished'
[2025-06-04 23:41:44] 2025-06-04 21:41:28,414 | INFO     | this job has now completed (state=finished)
[2025-06-04 23:41:44] 2025-06-04 21:41:28,414 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 23:41:44] 2025-06-04 21:41:28,414 | INFO     | log transfer has been attempted: DONE
[2025-06-04 23:41:44] 2025-06-04 21:41:28,414 | INFO     | job 6677920677 has finished - writing final server update
[2025-06-04 23:41:44] 2025-06-04 21:41:28,414 | INFO     | total number of processed events: 400 (read)
[2025-06-04 23:41:44] 2025-06-04 21:41:28,415 | INFO     | executing command: lscpu
[2025-06-04 23:41:44] 2025-06-04 21:41:28,432 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 23:41:44] 2025-06-04 21:41:28,880 | WARNING  | process 1346387 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 23:41:44] 2025-06-04 21:41:28,880 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677920677/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 23:41:44] 2025-06-04 21:41:28,916 | INFO     | number of running child processes to parent process 1346387: 1
[2025-06-04 23:41:44] 2025-06-04 21:41:28,916 | INFO     | maximum number of monitored processes: 6
[2025-06-04 23:41:44] 2025-06-04 21:41:31,419 | INFO     | monitor loop #336: job 0:6677920677 is in state 'finished'
[2025-06-04 23:41:44] 2025-06-04 21:41:31,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:41:44] 2025-06-04 21:41:31,605 | INFO     | PID=1339898 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 23:41:44] 2025-06-04 21:41:31,968 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 23:41:44] 2025-06-04 21:41:31,968 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677920677/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 23:41:44] 2025-06-04 21:41:31,969 | INFO     | extracted standard info from prmon json
[2025-06-04 23:41:44] 2025-06-04 21:41:31,969 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 23:41:44] 2025-06-04 21:41:31,969 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 23:41:44] 2025-06-04 21:41:31,969 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 23:41:44] 2025-06-04 21:41:31,969 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | sum of square deviations: 81266640.0
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | sum of deviations: -9912701239.0
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | mean x: 1749071182.5
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | mean y: 2532845.6875
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | -- intersect: 213349855656.95352
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | intersect: 213349855656.95352
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | chi2: 0.034065862435446966
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | -- intersect: 213349855656.95352
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | current memory leak: -121.98 B/s (using 64 data points, chi2=0.03)
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | ..............................
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | . Timing measurements:
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | . get job = 0 s
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | . initial setup = 1 s
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | . payload setup = 3 s
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | . stage-in = 0 s
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | . payload execution = 4329 s
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | . stage-out = 0 s
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | . log creation = 0 s
[2025-06-04 23:41:44] 2025-06-04 21:41:31,970 | INFO     | ..............................
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | 
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | job summary report
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | --------------------------------------------------
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | PanDA job id: 6677920677
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | task id: 45006595
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | errors: (none)
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | pilot state: finished 
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | transexitcode: 0
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | exeerrorcode: 0
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | exeerrordiag: 
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | exitcode: 0
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | exitmsg: OK
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | cpuconsumptiontime: 12449 s
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | nevents: 400
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | neventsw: 0
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | pid: 1346387
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | pgrp: 1346387
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | corecount: 3
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | event service: False
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | sizes: {0: 2397345, 3: 2397551, 11: 2397579, 4336: 2423682, 4338: 2432629, 4339: 2432685, 4342: 2432983}
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | --------------------------------------------------
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | 
[2025-06-04 23:41:44] 2025-06-04 21:41:32,001 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 23:41:44] 2025-06-04 21:41:32,015 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:41:44] 2025-06-04 21:41:32,015 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:41:44] 2025-06-04 21:41:32,015 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:41:44] 2025-06-04 21:41:32,015 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:41:44] 2025-06-04 21:41:32,015 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:41:44] 2025-06-04 21:41:32,015 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:41:44] 2025-06-04 21:41:32,015 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:41:44] 2025-06-04 21:41:32,015 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:41:44] 2025-06-04 21:41:32,016 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:41:44] 2025-06-04 21:41:32,016 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:41:44] 2025-06-04 21:41:32,016 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:41:44] 2025-06-04 21:41:32,016 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:41:44] 2025-06-04 21:41:32,016 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:41:44] 2025-06-04 21:41:32,016 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:41:44] 2025-06-04 21:41:32,016 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:41:44] 2025-06-04 21:41:32,016 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:41:44] 2025-06-04 21:41:32,016 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:41:44] 2025-06-04 21:41:32,016 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:41:44] 2025-06-04 21:41:32,016 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:41:44] 2025-06-04 21:41:32,016 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:41:44] 2025-06-04 21:41:32,016 | INFO     | job 6677920677 has completed (purged errors)
[2025-06-04 23:41:44] 2025-06-04 21:41:32,016 | INFO     | overall cleanup function is called
[2025-06-04 23:41:44] 2025-06-04 21:41:33,023 | INFO     | --- collectZombieJob: --- 10, [1346387]
[2025-06-04 23:41:44] 2025-06-04 21:41:33,023 | INFO     | zombie collector waiting for pid 1346387
[2025-06-04 23:41:44] 2025-06-04 21:41:33,023 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:41:44] 2025-06-04 21:41:33,023 | INFO     | collected zombie processes
[2025-06-04 23:41:44] 2025-06-04 21:41:33,023 | INFO     | will attempt to kill all subprocesses of pid=1346387
[2025-06-04 23:41:44] 2025-06-04 21:41:33,064 | INFO     | process IDs to be killed: [1346387] (in reverse order)
[2025-06-04 23:41:44] 2025-06-04 21:41:33,089 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:41:44] 2025-06-04 21:41:33,089 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:41:44] 2025-06-04 21:41:33,090 | INFO     | did not find any defunct processes belonging to 1346387
[2025-06-04 23:41:44] 2025-06-04 21:41:33,091 | INFO     | did not find any defunct processes belonging to 1346387
[2025-06-04 23:41:44] 2025-06-04 21:41:33,091 | INFO     | ready for new job
[2025-06-04 23:41:44] 2025-06-04 21:41:33,091 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:41:44] 2025-06-04 21:41:33,092 | INFO     | **************************************
[2025-06-04 23:41:44] 2025-06-04 21:41:33,092 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:41:44] 2025-06-04 21:41:33,092 | INFO     | **************************************
[2025-06-04 23:41:44] 2025-06-04 21:41:33,092 | INFO     | 
[2025-06-04 23:41:44] 2025-06-04 21:41:33,092 | INFO     | architecture information:
[2025-06-04 23:41:44] 2025-06-04 21:41:33,093 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:41:44] 2025-06-04 21:41:33,102 | INFO     | cat /etc/os-release:
[2025-06-04 23:41:44] NAME="CentOS Linux"
[2025-06-04 23:41:44] VERSION="7 (Core)"
[2025-06-04 23:41:44] ID="centos"
[2025-06-04 23:41:44] ID_LIKE="rhel fedora"
[2025-06-04 23:41:44] VERSION_ID="7"
[2025-06-04 23:41:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:41:44] ANSI_COLOR="0;31"
[2025-06-04 23:41:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:41:44] HOME_URL="https://www.centos.org/"
[2025-06-04 23:41:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:41:44] 
[2025-06-04 23:41:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:41:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:41:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:41:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:41:44] 
[2025-06-04 23:41:44] 2025-06-04 21:41:33,102 | INFO     | **************************************
[2025-06-04 23:41:44] 2025-06-04 21:41:33,605 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 23:41:44] 2025-06-04 21:41:33,619 | INFO     | sufficient remaining disk space (268448038912 B)
[2025-06-04 23:41:44] 2025-06-04 21:41:33,619 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:41:44] 2025-06-04 21:41:33,619 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:41:44] 2025-06-04 21:41:33,619 | INFO     | update_server=False
[2025-06-04 23:41:44] 2025-06-04 21:41:33,619 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:41:44] 2025-06-04 21:41:33,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:41:44] 2025-06-04 21:41:33,619 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 23:41:44] 2025-06-04 21:41:33,620 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:41:44] 2025-06-04 21:41:33,620 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:41:44] 2025-06-04 21:41:33,620 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:41:44] 2025-06-04 21:41:33,620 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:41:44] 2025-06-04 21:41:33,917 | INFO     | all payload control threads have been joined
[2025-06-04 23:41:44] 2025-06-04 21:41:33,923 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 23:41:44] 2025-06-04 21:41:33,924 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 23:41:44] 2025-06-04 21:41:33,924 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:41:44] 2025-06-04 21:41:33,924 | INFO     | will abort loop
[2025-06-04 23:41:44] 2025-06-04 21:41:33,936 | INFO     | all job control threads have been joined
[2025-06-04 23:41:44] 2025-06-04 21:41:34,371 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:41:44] 2025-06-04 21:41:34,389 | INFO     | all data control threads have been joined
[2025-06-04 23:41:44] 2025-06-04 21:41:34,625 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:41:44] 2025-06-04 21:41:34,625 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:41:44] 2025-06-04 21:41:34,789 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:41:44] 2025-06-04 21:41:34,897 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:41:44] 2025-06-04 21:41:34,923 | INFO     | [payload] control thread has finished
[2025-06-04 23:41:44] 2025-06-04 21:41:34,930 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:41:44] 2025-06-04 21:41:34,942 | INFO     | [job] control thread has finished
[2025-06-04 23:41:44] 2025-06-04 21:41:35,141 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:41:44] 2025-06-04 21:41:35,150 | INFO     | [job] validate thread has finished
[2025-06-04 23:41:44] 2025-06-04 21:41:35,277 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:41:44] 2025-06-04 21:41:35,282 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:41:44] 2025-06-04 21:41:35,395 | INFO     | [data] control thread has finished
[2025-06-04 23:41:44] 2025-06-04 21:41:35,583 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:41:44] 2025-06-04 21:41:35,626 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:41:44] 2025-06-04 21:41:35,960 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:41:44] 2025-06-04 21:41:38,378 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:41:44] 2025-06-04 21:41:39,495 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139865287296832)>', '<ExcThread(monitor, started 139864796292864)>']
[2025-06-04 23:41:44] 2025-06-04 21:41:39,652 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:41:44] 2025-06-04 21:41:39,652 | INFO     | [monitor] control thread has ended
[2025-06-04 23:41:44] 2025-06-04 21:41:44,521 | INFO     | all workflow threads have been joined
[2025-06-04 23:41:44] 2025-06-04 21:41:44,521 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:41:44] 2025-06-04 21:41:44,522 | INFO     | traces error code: 0
[2025-06-04 23:41:44] 2025-06-04 21:41:44,522 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:41:44] 2025-06-04 21:41:44,571 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:41:44] 2025-06-04 21:41:44,574 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:41:44] 2025-06-04 21:41:44,576 [wrapper] pilotpid: 1339898
[2025-06-04 23:41:44] 2025-06-04 21:41:44,578 [wrapper] Pilot exit status: 0
[2025-06-04 23:41:44] 2025-06-04 21:41:44,586 [wrapper] pandaids: 6677920677
[2025-06-04 23:41:44] 2025-06-04 21:41:44,602 [wrapper] cleanup supervisor_pilot 1355770 1339899
[2025-06-04 23:41:44] 2025-06-04 21:41:44,605 [wrapper] Test setup, not cleaning
[2025-06-04 23:41:44] 2025-06-04 21:41:44,608 [wrapper] apfmon messages muted
[2025-06-04 23:41:44] 2025-06-04 21:41:44,610 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:41:44] 2025-06-04 21:41:44,613 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:41:44]  *** Error codes and diagnostics ***
[2025-06-04 23:41:44]     "exeErrorCode": 0,
[2025-06-04 23:41:44]     "exeErrorDiag": "",
[2025-06-04 23:41:44]     "pilotErrorCode": 0,
[2025-06-04 23:41:44]     "pilotErrorDiag": "",
[2025-06-04 23:41:44]  *** Listing of results directory ***
[2025-06-04 23:41:44] total 391188
[2025-06-04 23:41:44] -rw-r--r-- 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 23:41:44] -rwx------ 1 boinc boinc     37140 Jun  3 20:30 runpilot2-wrapper.sh
[2025-06-04 23:41:44] -rw-r--r-- 1 boinc boinc      5111 Jun  3 20:30 queuedata.json
[2025-06-04 23:41:44] -rw-r--r-- 1 boinc boinc       100 Jun  4 22:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:41:44] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 22:28 run_atlas
[2025-06-04 23:41:44] -rw-r--r-- 1 boinc boinc       105 Jun  4 22:28 job.xml
[2025-06-04 23:41:44] -rw-r--r-- 2 boinc boinc 215772908 Jun  4 22:28 EVNT.45006593._001694.pool.root.1
[2025-06-04 23:41:44] -rw-r--r-- 1 boinc boinc      6929 Jun  4 22:28 init_data.xml
[2025-06-04 23:41:44] drwxrwx--x 2 boinc boinc      4096 Jun  4 22:28 shared
[2025-06-04 23:41:44] -rw-r--r-- 2 boinc boinc    508878 Jun  4 22:28 input.tar.gz
[2025-06-04 23:41:44] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:28 start_atlas.sh
[2025-06-04 23:41:44] -rw-r--r-- 1 boinc boinc         0 Jun  4 22:28 boinc_lockfile
[2025-06-04 23:41:44] -rw-r--r-- 1 boinc boinc      2525 Jun  4 22:28 pandaJob.out
[2025-06-04 23:41:44] -rw------- 1 boinc boinc    987032 Jun  4 22:28 agis_schedconf.cvmfs.json
[2025-06-04 23:41:44] -rw------- 1 boinc boinc   1598969 Jun  4 22:28 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:41:44] drwx------ 4 boinc boinc      4096 Jun  4 22:28 pilot3
[2025-06-04 23:41:44] -rw------- 1 boinc boinc 179671140 Jun  4 23:41 HITS.45006595._042229.pool.root.1
[2025-06-04 23:41:44] -rw-r--r-- 1 boinc boinc       529 Jun  4 23:41 boinc_task_state.xml
[2025-06-04 23:41:44] -rw------- 1 boinc boinc        95 Jun  4 23:41 pilot_heartbeat.json
[2025-06-04 23:41:44] -rw------- 1 boinc boinc      1027 Jun  4 23:41 memory_monitor_summary.json
[2025-06-04 23:41:44] -rw------- 1 boinc boinc    219241 Jun  4 23:41 log.45006595._042229.job.log.tgz.1
[2025-06-04 23:41:44] -rw------- 1 boinc boinc      7647 Jun  4 23:41 heartbeat.json
[2025-06-04 23:41:44] -rw-r--r-- 1 boinc boinc      8192 Jun  4 23:41 boinc_mmap_file
[2025-06-04 23:41:44] -rw-r--r-- 1 boinc boinc        27 Jun  4 23:41 wrapper_checkpoint.txt
[2025-06-04 23:41:44] -rw------- 1 boinc boinc      4666 Jun  4 23:41 pilotlog.txt
[2025-06-04 23:41:44] -rw------- 1 boinc boinc    430294 Jun  4 23:41 log.45006595._042229.job.log.1
[2025-06-04 23:41:44] -rw------- 1 boinc boinc       357 Jun  4 23:41 output.list
[2025-06-04 23:41:44] -rw-r--r-- 1 boinc boinc       620 Jun  4 23:41 runtime_log
[2025-06-04 23:41:44] -rw------- 1 boinc boinc    665600 Jun  4 23:41 result.tar.gz
[2025-06-04 23:41:44] -rw-r--r-- 1 boinc boinc      8733 Jun  4 23:41 runtime_log.err
[2025-06-04 23:41:44] -rw------- 1 boinc boinc       658 Jun  4 23:41 Z0dKDmKalg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZZZKDm1tavXm.diag
[2025-06-04 23:41:44] -rw-r--r-- 1 boinc boinc     21590 Jun  4 23:41 stderr.txt
[2025-06-04 23:41:44] HITS file was successfully produced:
[2025-06-04 23:41:44] -rw------- 1 boinc boinc 179671140 Jun  4 23:41 shared/HITS.pool.root.1
[2025-06-04 23:41:44]  *** Contents of shared directory: ***
[2025-06-04 23:41:44] total 387356
[2025-06-04 23:41:44] -rw-r--r-- 2 boinc boinc 215772908 Jun  4 22:28 ATLAS.root_0
[2025-06-04 23:41:44] -rw-r--r-- 2 boinc boinc    508878 Jun  4 22:28 input.tar.gz
[2025-06-04 23:41:44] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:28 start_atlas.sh
[2025-06-04 23:41:44] -rw------- 1 boinc boinc 179671140 Jun  4 23:41 HITS.pool.root.1
[2025-06-04 23:41:44] -rw------- 1 boinc boinc    665600 Jun  4 23:41 result.tar.gz
23:41:46 (1336265): run_atlas exited; CPU time 12460.888243
23:41:46 (1336265): called boinc_finish(0)

</stderr_txt>
]]>

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