Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:37:32 (2328539): wrapper (7.7.26015): starting
08:37:32 (2328539): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 08:37:32] Arguments: --nthreads 12
[2025-06-04 08:37:32] Threads: 12
[2025-06-04 08:37:32] Checking for CVMFS
[2025-06-04 08:37:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:37:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:37:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:37:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:37:32] 2.12.6.0 5554 830 126608 146780 2 96 25341446 32935936 7181 16776704 0 5180310 99.569 4572727 34902 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 08:37:32] CVMFS is ok
[2025-06-04 08:37:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 08:37:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 08:37:32] Further information can be found at the LHC@home message board.
[2025-06-04 08:37:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:37:32] Checking for apptainer binary...
[2025-06-04 08:37:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:37:32] Running /usr/bin/apptainer --version
[2025-06-04 08:37:32] apptainer version 1.4.1-1.el9
[2025-06-04 08:37:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:37:32] c6-1-26-2.aglt2.org
[2025-06-04 08:37:32] apptainer works
[2025-06-04 08:37:32] Set ATHENA_PROC_NUMBER=12
[2025-06-04 08:37:32] Set ATHENA_CORE_NUMBER=12
[2025-06-04 08:37:32] Starting ATLAS job with PandaID=6677861935
[2025-06-04 08:37:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:26:51]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:26:51]  lfn=log.45006595._040087.job.log.tgz.1
[2025-06-04 09:26:51]  mtime=0
[2025-06-04 09:26:51]  protocol_id=None
[2025-06-04 09:26:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:26:51]  replicas=None
[2025-06-04 09:26:51]  scope=mc23_13p6TeV
[2025-06-04 09:26:51]  status=None
[2025-06-04 09:26:51]  status_code=0
[2025-06-04 09:26:51]  storage_token=
[2025-06-04 09:26:51]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677861935/log.45006595._040087.job.log.tgz.1
[2025-06-04 09:26:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/bd/log.45006595._040087.job.log.tgz.1
[2025-06-04 09:26:51]  workdir=None
[2025-06-04 09:26:51] ]
[2025-06-04 09:26:51] 2025-06-04 13:26:23,731 | INFO     | transferring file log.45006595._040087.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677861935/log.45006595._040087.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 09:26:51] 2025-06-04 13:26:23,732 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677861935/log.45006595._040087.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._040087.job
[2025-06-04 09:26:51] 2025-06-04 13:26:23,752 | INFO     | adding to output.list: log.45006595._040087.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/bd/log.45006595._040087.job.log.tg
[2025-06-04 09:26:51] 2025-06-04 13:26:23,753 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:26:51] 2025-06-04 13:26:23,753 | INFO     | summary of transferred files:
[2025-06-04 09:26:51] 2025-06-04 13:26:23,753 | INFO     |  -- lfn=log.45006595._040087.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:26:51] 2025-06-04 13:26:23,753 | INFO     | stage-out finished correctly
[2025-06-04 09:26:51] 2025-06-04 13:26:24,919 | INFO     | PID=2332530 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 09:26:51] 2025-06-04 13:26:24,919 | INFO     | .. there are 8 such processes running
[2025-06-04 09:26:51] 2025-06-04 13:26:25,360 | INFO     | monitor loop #224: job 0:6677861935 is in state 'finished'
[2025-06-04 09:26:51] 2025-06-04 13:26:25,360 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:26:51] 2025-06-04 13:26:25,890 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:26:51] 2025-06-04 13:26:25,924 | INFO     | 2927s have passed since pilot start - server update state is 'RUNNING'
[2025-06-04 09:26:51] 2025-06-04 13:26:27,725 | INFO     | job 6677861935 has state=finished
[2025-06-04 09:26:51] 2025-06-04 13:26:27,725 | INFO     | preparing for final server update for job 6677861935 in state='finished'
[2025-06-04 09:26:51] 2025-06-04 13:26:27,726 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:26:51] 2025-06-04 13:26:27,726 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:26:51] 2025-06-04 13:26:27,726 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:26:51] 2025-06-04 13:26:27,726 | INFO     | job 6677861935 has finished - writing final server update
[2025-06-04 09:26:51] 2025-06-04 13:26:27,726 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:26:51] 2025-06-04 13:26:27,743 | INFO     | executing command: lscpu
[2025-06-04 09:26:51] 2025-06-04 13:26:27,816 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:26:51] 2025-06-04 13:26:27,863 | INFO     | monitor loop #225: job 0:6677861935 is in state 'finished'
[2025-06-04 09:26:51] 2025-06-04 13:26:27,863 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:26:51] 2025-06-04 13:26:30,366 | INFO     | monitor loop #226: job 0:6677861935 is in state 'finished'
[2025-06-04 09:26:51] 2025-06-04 13:26:30,366 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:26:51] 2025-06-04 13:26:31,684 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:26:51] 2025-06-04 13:26:31,684 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677861935/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:26:51] 2025-06-04 13:26:31,686 | INFO     | extracted standard info from prmon json
[2025-06-04 09:26:51] 2025-06-04 13:26:31,686 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:26:51] 2025-06-04 13:26:31,686 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:26:51] 2025-06-04 13:26:31,686 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:26:51] 2025-06-04 13:26:31,686 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:26:51] 2025-06-04 13:26:31,688 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:26:51] 2025-06-04 13:26:31,688 | INFO     | sum of square deviations: 21358540.0
[2025-06-04 09:26:51] 2025-06-04 13:26:31,688 | INFO     | sum of deviations: 2574613702.0
[2025-06-04 09:26:51] 2025-06-04 13:26:31,688 | INFO     | mean x: 1749042211.0
[2025-06-04 09:26:51] 2025-06-04 13:26:31,688 | INFO     | mean y: 2617226.3170731706
[2025-06-04 09:26:51] 2025-06-04 13:26:31,689 | INFO     | -- intersect: -210831458596.13965
[2025-06-04 09:26:51] 2025-06-04 13:26:31,689 | INFO     | intersect: -210831458596.13965
[2025-06-04 09:26:51] 2025-06-04 13:26:31,689 | INFO     | chi2: 0.8135933315537877
[2025-06-04 09:26:51] 2025-06-04 13:26:31,689 | INFO     | -- intersect: -210831458596.13965
[2025-06-04 09:26:51] 2025-06-04 13:26:31,689 | INFO     | current memory leak: 120.54 B/s (using 41 data points, chi2=0.81)
[2025-06-04 09:26:51] 2025-06-04 13:26:31,689 | INFO     | ..............................
[2025-06-04 09:26:51] 2025-06-04 13:26:31,689 | INFO     | . Timing measurements:
[2025-06-04 09:26:51] 2025-06-04 13:26:31,690 | INFO     | . get job = 0 s
[2025-06-04 09:26:51] 2025-06-04 13:26:31,690 | INFO     | . initial setup = 2 s
[2025-06-04 09:26:51] 2025-06-04 13:26:31,690 | INFO     | . payload setup = 6 s
[2025-06-04 09:26:51] 2025-06-04 13:26:31,690 | INFO     | . stage-in = 0 s
[2025-06-04 09:26:51] 2025-06-04 13:26:31,690 | INFO     | . payload execution = 2895 s
[2025-06-04 09:26:51] 2025-06-04 13:26:31,690 | INFO     | . stage-out = 0 s
[2025-06-04 09:26:51] 2025-06-04 13:26:31,690 | INFO     | . log creation = 0 s
[2025-06-04 09:26:51] 2025-06-04 13:26:31,690 | INFO     | ..............................
[2025-06-04 09:26:51] 2025-06-04 13:26:31,780 | INFO     | 
[2025-06-04 09:26:51] 2025-06-04 13:26:31,780 | INFO     | job summary report
[2025-06-04 09:26:51] 2025-06-04 13:26:31,780 | INFO     | --------------------------------------------------
[2025-06-04 09:26:51] 2025-06-04 13:26:31,781 | INFO     | PanDA job id: 6677861935
[2025-06-04 09:26:51] 2025-06-04 13:26:31,781 | INFO     | task id: 45006595
[2025-06-04 09:26:51] 2025-06-04 13:26:31,781 | INFO     | errors: (none)
[2025-06-04 09:26:51] 2025-06-04 13:26:31,781 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:26:51] 2025-06-04 13:26:31,781 | INFO     | pilot state: finished 
[2025-06-04 09:26:51] 2025-06-04 13:26:31,781 | INFO     | transexitcode: 0
[2025-06-04 09:26:51] 2025-06-04 13:26:31,781 | INFO     | exeerrorcode: 0
[2025-06-04 09:26:51] 2025-06-04 13:26:31,781 | INFO     | exeerrordiag: 
[2025-06-04 09:26:51] 2025-06-04 13:26:31,781 | INFO     | exitcode: 0
[2025-06-04 09:26:51] 2025-06-04 13:26:31,781 | INFO     | exitmsg: OK
[2025-06-04 09:26:51] 2025-06-04 13:26:31,781 | INFO     | cpuconsumptiontime: 27490 s
[2025-06-04 09:26:51] 2025-06-04 13:26:31,781 | INFO     | nevents: 400
[2025-06-04 09:26:51] 2025-06-04 13:26:31,781 | INFO     | neventsw: 0
[2025-06-04 09:26:51] 2025-06-04 13:26:31,781 | INFO     | pid: 2339181
[2025-06-04 09:26:51] 2025-06-04 13:26:31,781 | INFO     | pgrp: 2339181
[2025-06-04 09:26:51] 2025-06-04 13:26:31,781 | INFO     | corecount: 12
[2025-06-04 09:26:51] 2025-06-04 13:26:31,781 | INFO     | event service: False
[2025-06-04 09:26:51] 2025-06-04 13:26:31,782 | INFO     | sizes: {0: 2397286, 4: 2397492, 11: 2397520, 2906: 2422849, 2908: 2431790, 2910: 2431846, 2916: 2432144}
[2025-06-04 09:26:51] 2025-06-04 13:26:31,782 | INFO     | --------------------------------------------------
[2025-06-04 09:26:51] 2025-06-04 13:26:31,782 | INFO     | 
[2025-06-04 09:26:51] 2025-06-04 13:26:31,782 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 09:26:51] 2025-06-04 13:26:31,800 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:26:51] 2025-06-04 13:26:31,800 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:26:51] 2025-06-04 13:26:31,801 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:26:51] 2025-06-04 13:26:31,801 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:26:51] 2025-06-04 13:26:31,801 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:26:51] 2025-06-04 13:26:31,801 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:26:51] 2025-06-04 13:26:31,801 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:26:51] 2025-06-04 13:26:31,801 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:26:51] 2025-06-04 13:26:31,801 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:26:51] 2025-06-04 13:26:31,801 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:26:51] 2025-06-04 13:26:31,801 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:26:51] 2025-06-04 13:26:31,801 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:26:51] 2025-06-04 13:26:31,802 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:26:51] 2025-06-04 13:26:31,802 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:26:51] 2025-06-04 13:26:31,802 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:26:51] 2025-06-04 13:26:31,802 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:26:51] 2025-06-04 13:26:31,802 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:26:51] 2025-06-04 13:26:31,802 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:26:51] 2025-06-04 13:26:31,802 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:26:51] 2025-06-04 13:26:31,802 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:26:51] 2025-06-04 13:26:31,803 | INFO     | job 6677861935 has completed (purged errors)
[2025-06-04 09:26:51] 2025-06-04 13:26:31,803 | INFO     | overall cleanup function is called
[2025-06-04 09:26:51] 2025-06-04 13:26:32,809 | INFO     | --- collectZombieJob: --- 10, [2339181]
[2025-06-04 09:26:51] 2025-06-04 13:26:32,809 | INFO     | zombie collector waiting for pid 2339181
[2025-06-04 09:26:51] 2025-06-04 13:26:32,809 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:26:51] 2025-06-04 13:26:32,809 | INFO     | collected zombie processes
[2025-06-04 09:26:51] 2025-06-04 13:26:32,809 | INFO     | will attempt to kill all subprocesses of pid=2339181
[2025-06-04 09:26:51] 2025-06-04 13:26:33,015 | INFO     | process IDs to be killed: [2339181] (in reverse order)
[2025-06-04 09:26:51] 2025-06-04 13:26:33,088 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:26:51] 2025-06-04 13:26:33,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:26:51] 2025-06-04 13:26:33,096 | INFO     | did not find any defunct processes belonging to 2339181
[2025-06-04 09:26:51] 2025-06-04 13:26:33,104 | INFO     | did not find any defunct processes belonging to 2339181
[2025-06-04 09:26:51] 2025-06-04 13:26:33,104 | INFO     | ready for new job
[2025-06-04 09:26:51] 2025-06-04 13:26:33,105 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:26:51] 2025-06-04 13:26:33,106 | INFO     | **************************************
[2025-06-04 09:26:51] 2025-06-04 13:26:33,106 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:26:51] 2025-06-04 13:26:33,106 | INFO     | **************************************
[2025-06-04 09:26:51] 2025-06-04 13:26:33,107 | INFO     | 
[2025-06-04 09:26:51] 2025-06-04 13:26:33,121 | INFO     | architecture information:
[2025-06-04 09:26:51] 2025-06-04 13:26:33,122 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:26:51] 2025-06-04 13:26:33,136 | INFO     | cat /etc/os-release:
[2025-06-04 09:26:51] NAME="CentOS Linux"
[2025-06-04 09:26:51] VERSION="7 (Core)"
[2025-06-04 09:26:51] ID="centos"
[2025-06-04 09:26:51] ID_LIKE="rhel fedora"
[2025-06-04 09:26:51] VERSION_ID="7"
[2025-06-04 09:26:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:26:51] ANSI_COLOR="0;31"
[2025-06-04 09:26:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:26:51] HOME_URL="https://www.centos.org/"
[2025-06-04 09:26:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:26:51] 
[2025-06-04 09:26:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:26:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:26:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:26:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:26:51] 
[2025-06-04 09:26:51] 2025-06-04 13:26:33,136 | INFO     | **************************************
[2025-06-04 09:26:51] 2025-06-04 13:26:33,639 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 09:26:51] 2025-06-04 13:26:33,653 | INFO     | sufficient remaining disk space (76304875520 B)
[2025-06-04 09:26:51] 2025-06-04 13:26:33,653 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:26:51] 2025-06-04 13:26:33,653 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:26:51] 2025-06-04 13:26:33,653 | INFO     | update_server=False
[2025-06-04 09:26:51] 2025-06-04 13:26:33,654 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:26:51] 2025-06-04 13:26:33,654 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:26:51] 2025-06-04 13:26:33,654 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:26:51] 2025-06-04 13:26:33,654 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:26:51] 2025-06-04 13:26:33,654 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:26:51] 2025-06-04 13:26:33,654 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:26:51] 2025-06-04 13:26:33,872 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:26:51] 2025-06-04 13:26:33,872 | INFO     | aborting loop
[2025-06-04 09:26:51] 2025-06-04 13:26:34,091 | INFO     | all data control threads have been joined
[2025-06-04 09:26:51] 2025-06-04 13:26:34,096 | INFO     | all payload control threads have been joined
[2025-06-04 09:26:51] 2025-06-04 13:26:34,357 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:26:51] 2025-06-04 13:26:34,659 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:26:51] 2025-06-04 13:26:34,659 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:26:51] 2025-06-04 13:26:34,878 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:26:51] 2025-06-04 13:26:34,886 | INFO     | all job control threads have been joined
[2025-06-04 09:26:51] 2025-06-04 13:26:35,073 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:26:51] 2025-06-04 13:26:35,096 | INFO     | [data] control thread has finished
[2025-06-04 09:26:51] 2025-06-04 13:26:35,101 | INFO     | [payload] control thread has finished
[2025-06-04 09:26:51] 2025-06-04 13:26:35,396 | INFO     | [job] validate thread has finished
[2025-06-04 09:26:51] 2025-06-04 13:26:35,425 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:26:51] 2025-06-04 13:26:35,427 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:26:51] 2025-06-04 13:26:35,628 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:26:51] 2025-06-04 13:26:35,728 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:26:51] 2025-06-04 13:26:35,891 | INFO     | [job] control thread has finished
[2025-06-04 09:26:51] 2025-06-04 13:26:36,011 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:26:51] 2025-06-04 13:26:36,363 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:26:51] 2025-06-04 13:26:36,476 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:26:51] 2025-06-04 13:26:40,482 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:26:51] 2025-06-04 13:26:44,372 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:26:51] 2025-06-04 13:26:45,378 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:26:51] 2025-06-04 13:26:45,744 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140118568486720)>', '<ExcThread(monitor, started 140117805102848)>']
[2025-06-04 09:26:51] 2025-06-04 13:26:46,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:26:51] 2025-06-04 13:26:46,715 | INFO     | [monitor] control thread has ended
[2025-06-04 09:26:51] 2025-06-04 13:26:50,769 | INFO     | all workflow threads have been joined
[2025-06-04 09:26:51] 2025-06-04 13:26:50,770 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:26:51] 2025-06-04 13:26:50,770 | INFO     | traces error code: 0
[2025-06-04 09:26:51] 2025-06-04 13:26:50,770 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:26:51] 2025-06-04 13:26:50,910 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:26:51] 2025-06-04 13:26:50,913 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:26:51] 2025-06-04 13:26:50,915 [wrapper] pilotpid: 2332530
[2025-06-04 09:26:51] 2025-06-04 13:26:50,917 [wrapper] Pilot exit status: 0
[2025-06-04 09:26:51] 2025-06-04 13:26:50,927 [wrapper] pandaids: 6677861935
[2025-06-04 09:26:51] 2025-06-04 13:26:50,977 [wrapper] cleanup supervisor_pilot 2444851 2332531
[2025-06-04 09:26:51] 2025-06-04 13:26:50,981 [wrapper] Test setup, not cleaning
[2025-06-04 09:26:51] 2025-06-04 13:26:50,983 [wrapper] apfmon messages muted
[2025-06-04 09:26:51] 2025-06-04 13:26:50,986 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:26:51] 2025-06-04 13:26:50,988 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:26:51]  *** Error codes and diagnostics ***
[2025-06-04 09:26:51]     "exeErrorCode": 0,
[2025-06-04 09:26:51]     "exeErrorDiag": "",
[2025-06-04 09:26:51]     "pilotErrorCode": 0,
[2025-06-04 09:26:51]     "pilotErrorDiag": "",
[2025-06-04 09:26:51]  *** Listing of results directory ***
[2025-06-04 09:26:51] total 390216
[2025-06-04 09:26:51] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 12:58 pilot3.tar.gz
[2025-06-04 09:26:51] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 13:15 queuedata.json
[2025-06-04 09:26:51] -rwx------. 1 boincer umatlas     37140 Jun  3 13:15 runpilot2-wrapper.sh
[2025-06-04 09:26:51] -rw-r--r--. 1 boincer umatlas       100 Jun  4 08:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:26:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 08:37 run_atlas
[2025-06-04 09:26:51] -rw-r--r--. 1 boincer umatlas       105 Jun  4 08:37 job.xml
[2025-06-04 09:26:51] -rw-r--r--. 2 boincer umatlas 212509040 Jun  4 08:37 EVNT.45006593._000269.pool.root.1
[2025-06-04 09:26:51] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:37 start_atlas.sh
[2025-06-04 09:26:51] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 08:37 shared
[2025-06-04 09:26:51] -rw-r--r--. 2 boincer umatlas    508887 Jun  4 08:37 input.tar.gz
[2025-06-04 09:26:51] -rw-r--r--. 1 boincer umatlas         0 Jun  4 08:37 boinc_lockfile
[2025-06-04 09:26:51] -rw-r--r--. 1 boincer umatlas      2522 Jun  4 08:37 pandaJob.out
[2025-06-04 09:26:51] -rw-------. 1 boincer umatlas    986811 Jun  4 08:37 agis_schedconf.cvmfs.json
[2025-06-04 09:26:51] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:37 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:26:51] drwx------. 4 boincer umatlas      4096 Jun  4 08:37 pilot3
[2025-06-04 09:26:51] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 09:22 init_data.xml
[2025-06-04 09:26:51] -rw-------. 1 boincer umatlas 181906659 Jun  4 09:25 HITS.45006595._040087.pool.root.1
[2025-06-04 09:26:51] -rw-r--r--. 1 boincer umatlas       529 Jun  4 09:25 boinc_task_state.xml
[2025-06-04 09:26:51] -rw-------. 1 boincer umatlas      1036 Jun  4 09:26 memory_monitor_summary.json
[2025-06-04 09:26:51] -rw-------. 1 boincer umatlas        95 Jun  4 09:26 pilot_heartbeat.json
[2025-06-04 09:26:51] -rw-------. 1 boincer umatlas    352536 Jun  4 09:26 log.45006595._040087.job.log.tgz.1
[2025-06-04 09:26:51] -rw-------. 1 boincer umatlas      7713 Jun  4 09:26 heartbeat.json
[2025-06-04 09:26:51] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 09:26 boinc_mmap_file
[2025-06-04 09:26:51] -rw-r--r--. 1 boincer umatlas        27 Jun  4 09:26 wrapper_checkpoint.txt
[2025-06-04 09:26:51] -rw-------. 1 boincer umatlas      4548 Jun  4 09:26 pilotlog.txt
[2025-06-04 09:26:51] -rw-------. 1 boincer umatlas    311907 Jun  4 09:26 log.45006595._040087.job.log.1
[2025-06-04 09:26:51] -rw-------. 1 boincer umatlas       357 Jun  4 09:26 output.list
[2025-06-04 09:26:51] -rw-r--r--. 1 boincer umatlas       620 Jun  4 09:26 runtime_log
[2025-06-04 09:26:51] -rw-------. 1 boincer umatlas    686080 Jun  4 09:26 result.tar.gz
[2025-06-04 09:26:51] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 09:26 runtime_log.err
[2025-06-04 09:26:51] -rw-------. 1 boincer umatlas       652 Jun  4 09:26 lUiMDmVPkg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMHlKDm1kwrOm.diag
[2025-06-04 09:26:51] -rw-r--r--. 1 boincer umatlas     21659 Jun  4 09:26 stderr.txt
[2025-06-04 09:26:51] HITS file was successfully produced:
[2025-06-04 09:26:51] -rw-------. 1 boincer umatlas 181906659 Jun  4 09:25 shared/HITS.pool.root.1
[2025-06-04 09:26:51]  *** Contents of shared directory: ***
[2025-06-04 09:26:51] total 386368
[2025-06-04 09:26:51] -rw-r--r--. 2 boincer umatlas 212509040 Jun  4 08:37 ATLAS.root_0
[2025-06-04 09:26:51] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 08:37 start_atlas.sh
[2025-06-04 09:26:51] -rw-r--r--. 2 boincer umatlas    508887 Jun  4 08:37 input.tar.gz
[2025-06-04 09:26:51] -rw-------. 1 boincer umatlas 181906659 Jun  4 09:25 HITS.pool.root.1
[2025-06-04 09:26:51] -rw-------. 1 boincer umatlas    686080 Jun  4 09:26 result.tar.gz
09:26:52 (2328539): run_atlas exited; CPU time 27536.442173
09:26:52 (2328539): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN