Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:25:59 (3760124): wrapper (7.7.26015): starting
13:25:59 (3760124): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 13:25:59] Arguments: --nthreads 4
[2025-06-04 13:25:59] Threads: 4
[2025-06-04 13:25:59] Checking for CVMFS
[2025-06-04 13:25:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:25:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:25:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:25:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:25:59] 2.12.7.0 963705 1253 55944 146780 2 187 3542900 4096000 7294 130560 0 7552476 99.998 317691 1535 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-06-04 13:25:59] CVMFS is ok
[2025-06-04 13:25:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:25:59] Checking for apptainer binary...
[2025-06-04 13:25:59] apptainer is not installed, using version from CVMFS
[2025-06-04 13:25:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:26:00] senture-z10pe-l
[2025-06-04 13:26:00] apptainer works
[2025-06-04 13:26:00] Set ATHENA_PROC_NUMBER=4
[2025-06-04 13:26:00] Set ATHENA_CORE_NUMBER=4
[2025-06-04 13:26:00] Starting ATLAS job with PandaID=6678390255
[2025-06-04 13:26:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:09:21]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:09:21] 2025-06-04 15:09:06,778 | INFO     | total number of processed events: 400 (read)
[2025-06-04 16:09:21] 2025-06-04 15:09:06,782 | INFO     | executing command: lscpu
[2025-06-04 16:09:21] 2025-06-04 15:09:06,818 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 16:09:21] 2025-06-04 15:09:08,941 | INFO     | monitor loop #705: job 0:6678390255 is in state 'finished'
[2025-06-04 16:09:21] 2025-06-04 15:09:08,941 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:09:21] 2025-06-04 15:09:09,980 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 16:09:21] 2025-06-04 15:09:09,980 | INFO     | using path: /var/lib/boinc-client/slots/10/PanDA_Pilot-6678390255/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:09:21] 2025-06-04 15:09:09,981 | INFO     | extracted standard info from prmon json
[2025-06-04 16:09:21] 2025-06-04 15:09:09,981 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:09:21] 2025-06-04 15:09:09,981 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:09:21] 2025-06-04 15:09:09,982 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:09:21] 2025-06-04 15:09:09,982 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:09:21] 2025-06-04 15:09:09,983 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:09:21] 2025-06-04 15:09:09,984 | INFO     | sum of square deviations: 1270051720.0
[2025-06-04 16:09:21] 2025-06-04 15:09:09,984 | INFO     | sum of deviations: 15746485374.5
[2025-06-04 16:09:21] 2025-06-04 15:09:09,984 | INFO     | mean x: 1749044846.5
[2025-06-04 16:09:21] 2025-06-04 15:09:09,984 | INFO     | mean y: 2290682.33125
[2025-06-04 16:09:21] 2025-06-04 15:09:09,984 | INFO     | -- intersect: -21682896354.584732
[2025-06-04 16:09:21] 2025-06-04 15:09:09,984 | INFO     | intersect: -21682896354.584732
[2025-06-04 16:09:21] 2025-06-04 15:09:09,985 | INFO     | chi2: 1.1156619393805636
[2025-06-04 16:09:21] 2025-06-04 15:09:09,985 | INFO     | sum of square deviations: 1154663510.0
[2025-06-04 16:09:21] 2025-06-04 15:09:09,985 | INFO     | sum of deviations: 14934232097.0
[2025-06-04 16:09:21] 2025-06-04 15:09:09,985 | INFO     | mean x: 1749044694.0
[2025-06-04 16:09:21] 2025-06-04 15:09:09,985 | INFO     | mean y: 2289609.1548387096
[2025-06-04 16:09:21] 2025-06-04 15:09:09,985 | INFO     | -- intersect: -22619573108.428005
[2025-06-04 16:09:21] 2025-06-04 15:09:09,985 | INFO     | intersect: -22619573108.428005
[2025-06-04 16:09:21] 2025-06-04 15:09:09,985 | INFO     | chi2: 1.116530121223326
[2025-06-04 16:09:21] 2025-06-04 15:09:09,986 | INFO     | current chi2=1.116530121223326 (change=-0.07781764458546692 %)
[2025-06-04 16:09:21] 2025-06-04 15:09:09,986 | INFO     | right removable region: 154
[2025-06-04 16:09:21] 2025-06-04 15:09:09,986 | INFO     | sum of square deviations: 1154663510.0
[2025-06-04 16:09:21] 2025-06-04 15:09:09,986 | INFO     | sum of deviations: -743768912.9999998
[2025-06-04 16:09:21] 2025-06-04 15:09:09,986 | INFO     | mean x: 1749044999.0
[2025-06-04 16:09:21] 2025-06-04 15:09:09,986 | INFO     | mean y: 2312080.4903225806
[2025-06-04 16:09:21] 2025-06-04 15:09:09,986 | INFO     | -- intersect: 1128947924.117455
[2025-06-04 16:09:21] 2025-06-04 15:09:09,986 | INFO     | intersect: 1128947924.117455
[2025-06-04 16:09:21] 2025-06-04 15:09:09,986 | INFO     | chi2: 0.0018408327784217933
[2025-06-04 16:09:21] 2025-06-04 15:09:09,986 | INFO     | current chi2=0.0018408327784217933 (change=99.83500084448127 %)
[2025-06-04 16:09:21] 2025-06-04 15:09:09,987 | INFO     | sum of square deviations: 1046484737.5
[2025-06-04 16:09:21] 2025-06-04 15:09:09,987 | INFO     | sum of deviations: -1031564198.4999999
[2025-06-04 16:09:21] 2025-06-04 15:09:09,987 | INFO     | mean x: 1749045151.5
[2025-06-04 16:09:21] 2025-06-04 15:09:09,987 | INFO     | mean y: 2312484.8333333335
[2025-06-04 16:09:21] 2025-06-04 15:09:09,987 | INFO     | -- intersect: 1726420152.335181
[2025-06-04 16:09:21] 2025-06-04 15:09:09,987 | INFO     | intersect: 1726420152.335181
[2025-06-04 16:09:21] 2025-06-04 15:09:09,987 | INFO     | chi2: 0.0015905904054793823
[2025-06-04 16:09:21] 2025-06-04 15:09:09,987 | INFO     | current chi2=0.0015905904054793823 (change=13.59397637176757 %)
[2025-06-04 16:09:21] 2025-06-04 15:09:09,987 | INFO     | left removable region: 20
[2025-06-04 16:09:21] 2025-06-04 15:09:09,987 | INFO     | sum of square deviations: 746051197.5
[2025-06-04 16:09:21] 2025-06-04 15:09:09,988 | INFO     | sum of deviations: -1132780064.9999995
[2025-06-04 16:09:21] 2025-06-04 15:09:09,988 | INFO     | mean x: 1749045273.5
[2025-06-04 16:09:21] 2025-06-04 15:09:09,988 | INFO     | mean y: 2311666.776119403
[2025-06-04 16:09:21] 2025-06-04 15:09:09,988 | INFO     | -- intersect: 2658005572.5596724
[2025-06-04 16:09:21] 2025-06-04 15:09:09,988 | INFO     | intersect: 2658005572.5596724
[2025-06-04 16:09:21] 2025-06-04 15:09:09,988 | INFO     | chi2: 0.0012414227633950406
[2025-06-04 16:09:21] 2025-06-04 15:09:09,988 | INFO     | -- intersect: 2658005572.5596724
[2025-06-04 16:09:21] 2025-06-04 15:09:09,988 | INFO     | current memory leak: -1.52 B/s (using 134 data points, chi2=0.00)
[2025-06-04 16:09:21] 2025-06-04 15:09:09,989 | INFO     | ..............................
[2025-06-04 16:09:21] 2025-06-04 15:09:09,989 | INFO     | . Timing measurements:
[2025-06-04 16:09:21] 2025-06-04 15:09:09,989 | INFO     | . get job = 0 s
[2025-06-04 16:09:21] 2025-06-04 15:09:09,989 | INFO     | . initial setup = 1 s
[2025-06-04 16:09:21] 2025-06-04 15:09:09,989 | INFO     | . payload setup = 6 s
[2025-06-04 16:09:21] 2025-06-04 15:09:09,989 | INFO     | . stage-in = 0 s
[2025-06-04 16:09:21] 2025-06-04 15:09:09,989 | INFO     | . payload execution = 9746 s
[2025-06-04 16:09:21] 2025-06-04 15:09:09,989 | INFO     | . stage-out = 0 s
[2025-06-04 16:09:21] 2025-06-04 15:09:09,989 | INFO     | . log creation = 0 s
[2025-06-04 16:09:21] 2025-06-04 15:09:09,989 | INFO     | ..............................
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | 
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | job summary report
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | --------------------------------------------------
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | PanDA job id: 6678390255
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | task id: 45006595
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | errors: (none)
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | pilot state: finished 
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | transexitcode: 0
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | exeerrorcode: 0
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | exeerrordiag: 
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | exitcode: 0
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | exitmsg: OK
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | cpuconsumptiontime: 37748 s
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | nevents: 400
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | neventsw: 0
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | pid: 3824433
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | pgrp: 3824433
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | corecount: 4
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | event service: False
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | sizes: {0: 2397299, 4: 2397505, 11: 2397533, 9757: 2425716, 9758: 2434673, 9760: 2434729, 9765: 2435027}
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | --------------------------------------------------
[2025-06-04 16:09:21] 2025-06-04 15:09:10,037 | INFO     | 
[2025-06-04 16:09:21] 2025-06-04 15:09:10,038 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/10
[2025-06-04 16:09:21] 2025-06-04 15:09:10,057 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:09:21] 2025-06-04 15:09:10,058 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:09:21] 2025-06-04 15:09:10,058 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:09:21] 2025-06-04 15:09:10,058 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:09:21] 2025-06-04 15:09:10,058 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:09:21] 2025-06-04 15:09:10,058 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:09:21] 2025-06-04 15:09:10,058 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:09:21] 2025-06-04 15:09:10,058 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:09:21] 2025-06-04 15:09:10,058 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:09:21] 2025-06-04 15:09:10,058 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:09:21] 2025-06-04 15:09:10,058 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:09:21] 2025-06-04 15:09:10,058 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:09:21] 2025-06-04 15:09:10,058 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:09:21] 2025-06-04 15:09:10,058 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:09:21] 2025-06-04 15:09:10,058 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:09:21] 2025-06-04 15:09:10,058 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:09:21] 2025-06-04 15:09:10,058 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:09:21] 2025-06-04 15:09:10,058 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:09:21] 2025-06-04 15:09:10,058 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:09:21] 2025-06-04 15:09:10,058 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:09:21] 2025-06-04 15:09:10,059 | INFO     | job 6678390255 has completed (purged errors)
[2025-06-04 16:09:21] 2025-06-04 15:09:10,059 | INFO     | overall cleanup function is called
[2025-06-04 16:09:21] 2025-06-04 15:09:10,631 | INFO     | PID=3782868 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 16:09:21] 2025-06-04 15:09:10,631 | INFO     | .. there are 6 such processes running
[2025-06-04 16:09:21] 2025-06-04 15:09:11,066 | INFO     | --- collectZombieJob: --- 10, [3824433]
[2025-06-04 16:09:21] 2025-06-04 15:09:11,066 | INFO     | zombie collector waiting for pid 3824433
[2025-06-04 16:09:21] 2025-06-04 15:09:11,066 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:09:21] 2025-06-04 15:09:11,066 | INFO     | collected zombie processes
[2025-06-04 16:09:21] 2025-06-04 15:09:11,066 | INFO     | will attempt to kill all subprocesses of pid=3824433
[2025-06-04 16:09:21] 2025-06-04 15:09:11,202 | INFO     | process IDs to be killed: [3824433] (in reverse order)
[2025-06-04 16:09:21] 2025-06-04 15:09:11,273 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:09:21] 2025-06-04 15:09:11,273 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:09:21] 2025-06-04 15:09:11,278 | INFO     | did not find any defunct processes belonging to 3824433
[2025-06-04 16:09:21] 2025-06-04 15:09:11,282 | INFO     | did not find any defunct processes belonging to 3824433
[2025-06-04 16:09:21] 2025-06-04 15:09:11,283 | INFO     | ready for new job
[2025-06-04 16:09:21] 2025-06-04 15:09:11,283 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:09:21] 2025-06-04 15:09:11,284 | INFO     | **************************************
[2025-06-04 16:09:21] 2025-06-04 15:09:11,284 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:09:21] 2025-06-04 15:09:11,284 | INFO     | **************************************
[2025-06-04 16:09:21] 2025-06-04 15:09:11,284 | INFO     | 
[2025-06-04 16:09:21] 2025-06-04 15:09:11,286 | INFO     | pilot is running in a VM
[2025-06-04 16:09:21] 2025-06-04 15:09:11,286 | INFO     | architecture information:
[2025-06-04 16:09:21] 2025-06-04 15:09:11,287 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:09:21] 2025-06-04 15:09:11,300 | INFO     | cat /etc/os-release:
[2025-06-04 16:09:21] NAME="CentOS Linux"
[2025-06-04 16:09:21] VERSION="7 (Core)"
[2025-06-04 16:09:21] ID="centos"
[2025-06-04 16:09:21] ID_LIKE="rhel fedora"
[2025-06-04 16:09:21] VERSION_ID="7"
[2025-06-04 16:09:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:09:21] ANSI_COLOR="0;31"
[2025-06-04 16:09:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:09:21] HOME_URL="https://www.centos.org/"
[2025-06-04 16:09:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:09:21] 
[2025-06-04 16:09:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:09:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:09:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:09:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:09:21] 
[2025-06-04 16:09:21] 2025-06-04 15:09:11,300 | INFO     | **************************************
[2025-06-04 16:09:21] 2025-06-04 15:09:11,804 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/10
[2025-06-04 16:09:21] 2025-06-04 15:09:11,819 | INFO     | sufficient remaining disk space (114611453952 B)
[2025-06-04 16:09:21] 2025-06-04 15:09:11,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:09:21] 2025-06-04 15:09:11,820 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:09:21] 2025-06-04 15:09:11,820 | INFO     | update_server=False
[2025-06-04 16:09:21] 2025-06-04 15:09:11,820 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:09:21] 2025-06-04 15:09:11,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:09:21] 2025-06-04 15:09:11,820 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:09:21] 2025-06-04 15:09:11,821 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:09:21] 2025-06-04 15:09:12,450 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:09:21] 2025-06-04 15:09:12,450 | INFO     | aborting loop
[2025-06-04 16:09:21] 2025-06-04 15:09:12,637 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:09:21] 2025-06-04 15:09:12,637 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:09:21] 2025-06-04 15:09:12,637 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:09:21] 2025-06-04 15:09:12,797 | INFO     | all data control threads have been joined
[2025-06-04 16:09:21] 2025-06-04 15:09:12,815 | INFO     | all payload control threads have been joined
[2025-06-04 16:09:21] 2025-06-04 15:09:12,824 | INFO     | all job control threads have been joined
[2025-06-04 16:09:21] 2025-06-04 15:09:12,825 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:09:21] 2025-06-04 15:09:12,826 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:09:21] 2025-06-04 15:09:13,160 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:09:21] 2025-06-04 15:09:13,455 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:09:21] 2025-06-04 15:09:13,476 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:09:21] 2025-06-04 15:09:13,752 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:09:21] 2025-06-04 15:09:13,803 | INFO     | [data] control thread has finished
[2025-06-04 16:09:21] 2025-06-04 15:09:13,821 | INFO     | [payload] control thread has finished
[2025-06-04 16:09:21] 2025-06-04 15:09:13,826 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:09:21] 2025-06-04 15:09:13,829 | INFO     | [job] control thread has finished
[2025-06-04 16:09:21] 2025-06-04 15:09:13,929 | INFO     | [job] validate thread has finished
[2025-06-04 16:09:21] 2025-06-04 15:09:13,939 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:09:21] 2025-06-04 15:09:13,966 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:09:21] 2025-06-04 15:09:14,118 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:09:21] 2025-06-04 15:09:14,317 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:09:21] 2025-06-04 15:09:15,827 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:09:21] 2025-06-04 15:09:16,349 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130821400164160)>', '<ExcThread(monitor, started 130820694054656)>']
[2025-06-04 16:09:21] 2025-06-04 15:09:16,658 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:09:21] 2025-06-04 15:09:16,658 | INFO     | [monitor] control thread has ended
[2025-06-04 16:09:21] 2025-06-04 15:09:21,367 | INFO     | all workflow threads have been joined
[2025-06-04 16:09:21] 2025-06-04 15:09:21,367 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:09:21] 2025-06-04 15:09:21,367 | INFO     | traces error code: 0
[2025-06-04 16:09:21] 2025-06-04 15:09:21,367 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:09:21] 2025-06-04 15:09:21,516 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:09:21] 2025-06-04 15:09:21,519 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:09:21] 2025-06-04 15:09:21,522 [wrapper] pilotpid: 3782868
[2025-06-04 16:09:21] 2025-06-04 15:09:21,524 [wrapper] Pilot exit status: 0
[2025-06-04 16:09:21] 2025-06-04 15:09:21,533 [wrapper] pandaids: 6678390255
[2025-06-04 16:09:21] 2025-06-04 15:09:21,571 [wrapper] cleanup supervisor_pilot 4160048 3782869
[2025-06-04 16:09:21] 2025-06-04 15:09:21,574 [wrapper] Test setup, not cleaning
[2025-06-04 16:09:21] 2025-06-04 15:09:21,577 [wrapper] apfmon messages muted
[2025-06-04 16:09:21] 2025-06-04 15:09:21,580 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:09:21] 2025-06-04 15:09:21,582 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:09:21]  *** Error codes and diagnostics ***
[2025-06-04 16:09:21]     "exeErrorCode": 0,
[2025-06-04 16:09:21]     "exeErrorDiag": "",
[2025-06-04 16:09:21]     "pilotErrorCode": 0,
[2025-06-04 16:09:21]     "pilotErrorDiag": "",
[2025-06-04 16:09:21]  *** Listing of results directory ***
[2025-06-04 16:09:21] total 400344
[2025-06-04 16:09:21] -rwx------ 1 boinc boinc     37140 Jun  4 08:04 runpilot2-wrapper.sh
[2025-06-04 16:09:21] -rw-r--r-- 1 boinc boinc      5111 Jun  4 08:04 queuedata.json
[2025-06-04 16:09:21] -rw-r--r-- 1 boinc boinc    495897 Jun  4 08:04 pilot3.tar.gz
[2025-06-04 16:09:21] -rw-r--r-- 1 boinc boinc       100 Jun  4 13:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:09:21] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 13:25 run_atlas
[2025-06-04 16:09:21] -rw-r--r-- 1 boinc boinc       105 Jun  4 13:25 job.xml
[2025-06-04 16:09:21] -rw-r--r-- 2 boinc boinc 218217604 Jun  4 13:25 EVNT.45006593._002189.pool.root.1
[2025-06-04 16:09:21] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:25 start_atlas.sh
[2025-06-04 16:09:21] drwxrwx--x 2 boinc boinc      4096 Jun  4 13:25 shared
[2025-06-04 16:09:21] -rw-r--r-- 2 boinc boinc    508875 Jun  4 13:25 input.tar.gz
[2025-06-04 16:09:21] -rw-r--r-- 1 boinc boinc      6663 Jun  4 13:25 init_data.xml
[2025-06-04 16:09:21] -rw-r--r-- 1 boinc boinc         0 Jun  4 13:25 boinc_lockfile
[2025-06-04 16:09:21] -rw-r--r-- 1 boinc boinc      2524 Jun  4 13:26 pandaJob.out
[2025-06-04 16:09:21] -rw------- 1 boinc boinc    986811 Jun  4 13:26 agis_schedconf.cvmfs.json
[2025-06-04 16:09:21] -rw------- 1 boinc boinc   1598969 Jun  4 13:26 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:09:21] drwx------ 4 boinc boinc      4096 Jun  4 13:26 pilot3
[2025-06-04 16:09:21] -rw------- 1 boinc boinc        95 Jun  4 16:08 pilot_heartbeat.json
[2025-06-04 16:09:21] -rw------- 1 boinc boinc 185506937 Jun  4 16:08 HITS.45006595._054706.pool.root.1
[2025-06-04 16:09:21] -rw-r--r-- 1 boinc boinc       529 Jun  4 16:08 boinc_task_state.xml
[2025-06-04 16:09:21] -rw------- 1 boinc boinc      1030 Jun  4 16:08 memory_monitor_summary.json
[2025-06-04 16:09:21] -rw------- 1 boinc boinc    285661 Jun  4 16:09 log.45006595._054706.job.log.tgz.1
[2025-06-04 16:09:21] -rw------- 1 boinc boinc      7680 Jun  4 16:09 heartbeat.json
[2025-06-04 16:09:21] -rw-r--r-- 1 boinc boinc      8192 Jun  4 16:09 boinc_mmap_file
[2025-06-04 16:09:21] -rw-r--r-- 1 boinc boinc        27 Jun  4 16:09 wrapper_checkpoint.txt
[2025-06-04 16:09:21] -rw------- 1 boinc boinc      4424 Jun  4 16:09 pilotlog.txt
[2025-06-04 16:09:21] -rw------- 1 boinc boinc    909763 Jun  4 16:09 log.45006595._054706.job.log.1
[2025-06-04 16:09:21] -rw------- 1 boinc boinc       357 Jun  4 16:09 output.list
[2025-06-04 16:09:21] -rw-r--r-- 1 boinc boinc       620 Jun  4 16:09 runtime_log
[2025-06-04 16:09:21] -rw------- 1 boinc boinc   1218560 Jun  4 16:09 result.tar.gz
[2025-06-04 16:09:21] -rw-r--r-- 1 boinc boinc      8762 Jun  4 16:09 runtime_log.err
[2025-06-04 16:09:21] -rw------- 1 boinc boinc       650 Jun  4 16:09 LvCODmAMxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCbnKDmbGXALn.diag
[2025-06-04 16:09:21] -rw-r--r-- 1 boinc boinc     20881 Jun  4 16:09 stderr.txt
[2025-06-04 16:09:21] HITS file was successfully produced:
[2025-06-04 16:09:21] -rw------- 1 boinc boinc 185506937 Jun  4 16:08 shared/HITS.pool.root.1
[2025-06-04 16:09:21]  *** Contents of shared directory: ***
[2025-06-04 16:09:21] total 395980
[2025-06-04 16:09:21] -rw-r--r-- 2 boinc boinc 218217604 Jun  4 13:25 ATLAS.root_0
[2025-06-04 16:09:21] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:25 start_atlas.sh
[2025-06-04 16:09:21] -rw-r--r-- 2 boinc boinc    508875 Jun  4 13:25 input.tar.gz
[2025-06-04 16:09:21] -rw------- 1 boinc boinc 185506937 Jun  4 16:08 HITS.pool.root.1
[2025-06-04 16:09:21] -rw------- 1 boinc boinc   1218560 Jun  4 16:09 result.tar.gz
16:09:22 (3760124): run_atlas exited; CPU time 38093.743185
16:09:22 (3760124): called boinc_finish(0)

</stderr_txt>
]]>

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