Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:41:27 (2243293): wrapper (7.7.26015): starting
07:41:27 (2243293): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:41:27] Arguments: --nthreads 8
[2025-06-04 07:41:27] Threads: 8
[2025-06-04 07:41:27] Checking for CVMFS
[2025-06-04 07:41:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:41:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:41:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:41:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:41:27] 2.12.6.0 861369 32752 499036 146779 2 263 35844286 40960001 13888 16776704 0 154242139 99.658 143604818 26113 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:41:27] CVMFS is ok
[2025-06-04 07:41:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:41:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:41:27] Further information can be found at the LHC@home message board.
[2025-06-04 07:41:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:41:27] Checking for apptainer binary...
[2025-06-04 07:41:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:41:27] Running /usr/bin/apptainer --version
[2025-06-04 07:41:27] apptainer version 1.4.1-1.el9
[2025-06-04 07:41:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:41:27] c7-13-33.aglt2.org
[2025-06-04 07:41:27] apptainer works
[2025-06-04 07:41:27] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:41:27] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:41:27] Starting ATLAS job with PandaID=6678390189
[2025-06-04 07:41:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:40:51]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:40:51]  is_altstaged=None
[2025-06-04 08:40:51]  is_tar=False
[2025-06-04 08:40:51]  lfn=log.45006595._054640.job.log.tgz.1
[2025-06-04 08:40:51]  mtime=0
[2025-06-04 08:40:51]  protocol_id=None
[2025-06-04 08:40:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:40:51]  replicas=None
[2025-06-04 08:40:51]  scope=mc23_13p6TeV
[2025-06-04 08:40:51]  status=None
[2025-06-04 08:40:51]  status_code=0
[2025-06-04 08:40:51]  storage_token=
[2025-06-04 08:40:51]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678390189/log.45006595._054640.job.log.tgz.1
[2025-06-04 08:40:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/2f/log.45006595._054640.job.log.tgz.1
[2025-06-04 08:40:51]  workdir=None
[2025-06-04 08:40:51] ]
[2025-06-04 08:40:51] 2025-06-04 12:40:28,503 | INFO     | transferring file log.45006595._054640.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678390189/log.45006595._054640.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:40:51] 2025-06-04 12:40:28,503 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678390189/log.45006595._054640.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._054640.job
[2025-06-04 08:40:51] 2025-06-04 12:40:28,525 | INFO     | adding to output.list: log.45006595._054640.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/2f/log.45006595._054640.job.log.tg
[2025-06-04 08:40:51] 2025-06-04 12:40:28,526 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:40:51] 2025-06-04 12:40:28,526 | INFO     | summary of transferred files:
[2025-06-04 08:40:51] 2025-06-04 12:40:28,526 | INFO     |  -- lfn=log.45006595._054640.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:40:51] 2025-06-04 12:40:28,526 | INFO     | stage-out finished correctly
[2025-06-04 08:40:51] 2025-06-04 12:40:29,206 | WARNING  | process 2253784 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:40:51] 2025-06-04 12:40:29,207 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678390189/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:40:51] 2025-06-04 12:40:29,444 | INFO     | number of running child processes to parent process 2253784: 1
[2025-06-04 08:40:51] 2025-06-04 12:40:29,444 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:40:51] 2025-06-04 12:40:30,575 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:40:51] 2025-06-04 12:40:31,948 | INFO     | monitor loop #264: job 0:6678390189 is in state 'finished'
[2025-06-04 08:40:51] 2025-06-04 12:40:31,948 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:40:51] 2025-06-04 12:40:33,137 | INFO     | job 6678390189 has state=finished
[2025-06-04 08:40:51] 2025-06-04 12:40:33,138 | INFO     | preparing for final server update for job 6678390189 in state='finished'
[2025-06-04 08:40:51] 2025-06-04 12:40:33,138 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:40:51] 2025-06-04 12:40:33,138 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:40:51] 2025-06-04 12:40:33,138 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:40:51] 2025-06-04 12:40:33,138 | INFO     | job 6678390189 has finished - writing final server update
[2025-06-04 08:40:51] 2025-06-04 12:40:33,139 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:40:51] 2025-06-04 12:40:33,156 | INFO     | executing command: lscpu
[2025-06-04 08:40:51] 2025-06-04 12:40:33,240 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:40:51] 2025-06-04 12:40:34,451 | INFO     | monitor loop #265: job 0:6678390189 is in state 'finished'
[2025-06-04 08:40:51] 2025-06-04 12:40:34,451 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:40:51] 2025-06-04 12:40:36,733 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:40:51] 2025-06-04 12:40:36,734 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678390189/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:40:51] 2025-06-04 12:40:36,734 | INFO     | extracted standard info from prmon json
[2025-06-04 08:40:51] 2025-06-04 12:40:36,734 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:40:51] 2025-06-04 12:40:36,735 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:40:51] 2025-06-04 12:40:36,735 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:40:51] 2025-06-04 12:40:36,735 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:40:51] 2025-06-04 12:40:36,736 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:40:51] 2025-06-04 12:40:36,737 | INFO     | sum of square deviations: 41117050.0
[2025-06-04 08:40:51] 2025-06-04 12:40:36,737 | INFO     | sum of deviations: 189150995.9999986
[2025-06-04 08:40:51] 2025-06-04 12:40:36,737 | INFO     | mean x: 1749039154.0
[2025-06-04 08:40:51] 2025-06-04 12:40:36,737 | INFO     | mean y: 2275268.137254902
[2025-06-04 08:40:51] 2025-06-04 12:40:36,737 | INFO     | -- intersect: -8043839373.406702
[2025-06-04 08:40:51] 2025-06-04 12:40:36,737 | INFO     | intersect: -8043839373.406702
[2025-06-04 08:40:51] 2025-06-04 12:40:36,737 | INFO     | chi2: 0.8134613322404869
[2025-06-04 08:40:51] 2025-06-04 12:40:36,737 | INFO     | -- intersect: -8043839373.406702
[2025-06-04 08:40:51] 2025-06-04 12:40:36,737 | INFO     | current memory leak: 4.60 B/s (using 51 data points, chi2=0.81)
[2025-06-04 08:40:51] 2025-06-04 12:40:36,738 | INFO     | ..............................
[2025-06-04 08:40:51] 2025-06-04 12:40:36,738 | INFO     | . Timing measurements:
[2025-06-04 08:40:51] 2025-06-04 12:40:36,738 | INFO     | . get job = 0 s
[2025-06-04 08:40:51] 2025-06-04 12:40:36,738 | INFO     | . initial setup = 2 s
[2025-06-04 08:40:51] 2025-06-04 12:40:36,738 | INFO     | . payload setup = 6 s
[2025-06-04 08:40:51] 2025-06-04 12:40:36,738 | INFO     | . stage-in = 0 s
[2025-06-04 08:40:51] 2025-06-04 12:40:36,738 | INFO     | . payload execution = 3504 s
[2025-06-04 08:40:51] 2025-06-04 12:40:36,738 | INFO     | . stage-out = 0 s
[2025-06-04 08:40:51] 2025-06-04 12:40:36,738 | INFO     | . log creation = 0 s
[2025-06-04 08:40:51] 2025-06-04 12:40:36,738 | INFO     | ..............................
[2025-06-04 08:40:51] 2025-06-04 12:40:36,817 | INFO     | 
[2025-06-04 08:40:51] 2025-06-04 12:40:36,817 | INFO     | job summary report
[2025-06-04 08:40:51] 2025-06-04 12:40:36,817 | INFO     | --------------------------------------------------
[2025-06-04 08:40:51] 2025-06-04 12:40:36,818 | INFO     | PanDA job id: 6678390189
[2025-06-04 08:40:51] 2025-06-04 12:40:36,818 | INFO     | task id: 45006595
[2025-06-04 08:40:51] 2025-06-04 12:40:36,818 | INFO     | errors: (none)
[2025-06-04 08:40:51] 2025-06-04 12:40:36,818 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:40:51] 2025-06-04 12:40:36,818 | INFO     | pilot state: finished 
[2025-06-04 08:40:51] 2025-06-04 12:40:36,818 | INFO     | transexitcode: 0
[2025-06-04 08:40:51] 2025-06-04 12:40:36,818 | INFO     | exeerrorcode: 0
[2025-06-04 08:40:51] 2025-06-04 12:40:36,818 | INFO     | exeerrordiag: 
[2025-06-04 08:40:51] 2025-06-04 12:40:36,818 | INFO     | exitcode: 0
[2025-06-04 08:40:51] 2025-06-04 12:40:36,818 | INFO     | exitmsg: OK
[2025-06-04 08:40:51] 2025-06-04 12:40:36,818 | INFO     | cpuconsumptiontime: 22910 s
[2025-06-04 08:40:51] 2025-06-04 12:40:36,818 | INFO     | nevents: 400
[2025-06-04 08:40:51] 2025-06-04 12:40:36,818 | INFO     | neventsw: 0
[2025-06-04 08:40:51] 2025-06-04 12:40:36,818 | INFO     | pid: 2253784
[2025-06-04 08:40:51] 2025-06-04 12:40:36,818 | INFO     | pgrp: 2253784
[2025-06-04 08:40:51] 2025-06-04 12:40:36,818 | INFO     | corecount: 8
[2025-06-04 08:40:51] 2025-06-04 12:40:36,818 | INFO     | event service: False
[2025-06-04 08:40:51] 2025-06-04 12:40:36,819 | INFO     | sizes: {0: 2397342, 4: 2397548, 11: 2397576, 3514: 2423262, 3516: 2432203, 3518: 2432259, 3524: 2432557}
[2025-06-04 08:40:51] 2025-06-04 12:40:36,819 | INFO     | --------------------------------------------------
[2025-06-04 08:40:51] 2025-06-04 12:40:36,819 | INFO     | 
[2025-06-04 08:40:51] 2025-06-04 12:40:36,819 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 08:40:51] 2025-06-04 12:40:36,842 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:40:51] 2025-06-04 12:40:36,842 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:40:51] 2025-06-04 12:40:36,842 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:40:51] 2025-06-04 12:40:36,843 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:40:51] 2025-06-04 12:40:36,843 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:40:51] 2025-06-04 12:40:36,843 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:40:51] 2025-06-04 12:40:36,843 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:40:51] 2025-06-04 12:40:36,843 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:40:51] 2025-06-04 12:40:36,843 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:40:51] 2025-06-04 12:40:36,843 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:40:51] 2025-06-04 12:40:36,843 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:40:51] 2025-06-04 12:40:36,843 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:40:51] 2025-06-04 12:40:36,843 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:40:51] 2025-06-04 12:40:36,843 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:40:51] 2025-06-04 12:40:36,843 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:40:51] 2025-06-04 12:40:36,843 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:40:51] 2025-06-04 12:40:36,843 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:40:51] 2025-06-04 12:40:36,844 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:40:51] 2025-06-04 12:40:36,844 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:40:51] 2025-06-04 12:40:36,844 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:40:51] 2025-06-04 12:40:36,844 | INFO     | job 6678390189 has completed (purged errors)
[2025-06-04 08:40:51] 2025-06-04 12:40:36,844 | INFO     | overall cleanup function is called
[2025-06-04 08:40:51] 2025-06-04 12:40:37,852 | INFO     | --- collectZombieJob: --- 10, [2253784]
[2025-06-04 08:40:51] 2025-06-04 12:40:37,852 | INFO     | zombie collector waiting for pid 2253784
[2025-06-04 08:40:51] 2025-06-04 12:40:37,853 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:40:51] 2025-06-04 12:40:37,853 | INFO     | collected zombie processes
[2025-06-04 08:40:51] 2025-06-04 12:40:37,853 | INFO     | will attempt to kill all subprocesses of pid=2253784
[2025-06-04 08:40:51] 2025-06-04 12:40:38,184 | INFO     | process IDs to be killed: [2253784] (in reverse order)
[2025-06-04 08:40:51] 2025-06-04 12:40:38,295 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:40:51] 2025-06-04 12:40:38,295 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:40:51] 2025-06-04 12:40:38,310 | INFO     | did not find any defunct processes belonging to 2253784
[2025-06-04 08:40:51] 2025-06-04 12:40:38,321 | INFO     | did not find any defunct processes belonging to 2253784
[2025-06-04 08:40:51] 2025-06-04 12:40:38,322 | INFO     | ready for new job
[2025-06-04 08:40:51] 2025-06-04 12:40:38,322 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:40:51] 2025-06-04 12:40:38,323 | INFO     | **************************************
[2025-06-04 08:40:51] 2025-06-04 12:40:38,323 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:40:51] 2025-06-04 12:40:38,323 | INFO     | **************************************
[2025-06-04 08:40:51] 2025-06-04 12:40:38,323 | INFO     | 
[2025-06-04 08:40:51] 2025-06-04 12:40:38,338 | INFO     | architecture information:
[2025-06-04 08:40:51] 2025-06-04 12:40:38,339 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:40:51] 2025-06-04 12:40:38,356 | INFO     | cat /etc/os-release:
[2025-06-04 08:40:51] NAME="CentOS Linux"
[2025-06-04 08:40:51] VERSION="7 (Core)"
[2025-06-04 08:40:51] ID="centos"
[2025-06-04 08:40:51] ID_LIKE="rhel fedora"
[2025-06-04 08:40:51] VERSION_ID="7"
[2025-06-04 08:40:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:40:51] ANSI_COLOR="0;31"
[2025-06-04 08:40:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:40:51] HOME_URL="https://www.centos.org/"
[2025-06-04 08:40:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:40:51] 
[2025-06-04 08:40:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:40:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:40:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:40:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:40:51] 
[2025-06-04 08:40:51] 2025-06-04 12:40:38,356 | INFO     | **************************************
[2025-06-04 08:40:51] 2025-06-04 12:40:38,858 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 08:40:51] 2025-06-04 12:40:38,880 | INFO     | sufficient remaining disk space (86016786432 B)
[2025-06-04 08:40:51] 2025-06-04 12:40:38,880 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:40:51] 2025-06-04 12:40:38,881 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:40:51] 2025-06-04 12:40:38,881 | INFO     | update_server=False
[2025-06-04 08:40:51] 2025-06-04 12:40:38,881 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:40:51] 2025-06-04 12:40:38,881 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:40:51] 2025-06-04 12:40:38,882 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:40:51] 2025-06-04 12:40:38,882 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:40:51] 2025-06-04 12:40:38,882 | INFO     | aborting loop
[2025-06-04 08:40:51] 2025-06-04 12:40:38,882 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:40:51] 2025-06-04 12:40:38,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:40:51] 2025-06-04 12:40:39,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:40:51] 2025-06-04 12:40:39,374 | INFO     | all payload control threads have been joined
[2025-06-04 08:40:51] 2025-06-04 12:40:39,674 | INFO     | all data control threads have been joined
[2025-06-04 08:40:51] 2025-06-04 12:40:39,886 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:40:51] 2025-06-04 12:40:39,888 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:40:51] 2025-06-04 12:40:39,901 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:40:51] 2025-06-04 12:40:40,139 | INFO     | all job control threads have been joined
[2025-06-04 08:40:51] 2025-06-04 12:40:40,380 | INFO     | [payload] control thread has finished
[2025-06-04 08:40:51] 2025-06-04 12:40:40,539 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:40:51] 2025-06-04 12:40:40,679 | INFO     | [data] control thread has finished
[2025-06-04 08:40:51] 2025-06-04 12:40:40,799 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:40:51] 2025-06-04 12:40:40,849 | INFO     | [job] validate thread has finished
[2025-06-04 08:40:51] 2025-06-04 12:40:41,039 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:40:51] 2025-06-04 12:40:41,039 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:40:51] 2025-06-04 12:40:41,111 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:40:51] 2025-06-04 12:40:41,144 | INFO     | [job] control thread has finished
[2025-06-04 08:40:51] 2025-06-04 12:40:41,158 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:40:51] 2025-06-04 12:40:41,180 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:40:51] 2025-06-04 12:40:41,348 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:40:51] 2025-06-04 12:40:41,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:40:51] 2025-06-04 12:40:42,828 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:40:51] 2025-06-04 12:40:45,164 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:40:51] 2025-06-04 12:40:45,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140015319197504)>', '<ExcThread(monitor, started 140014834927360)>']
[2025-06-04 08:40:51] 2025-06-04 12:40:45,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:40:51] 2025-06-04 12:40:45,910 | INFO     | [monitor] control thread has ended
[2025-06-04 08:40:51] 2025-06-04 12:40:50,829 | INFO     | all workflow threads have been joined
[2025-06-04 08:40:51] 2025-06-04 12:40:50,829 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:40:51] 2025-06-04 12:40:50,830 | INFO     | traces error code: 0
[2025-06-04 08:40:51] 2025-06-04 12:40:50,830 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:40:51] 2025-06-04 12:40:50,991 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:40:51] 2025-06-04 12:40:50,994 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:40:51] 2025-06-04 12:40:50,998 [wrapper] pilotpid: 2246879
[2025-06-04 08:40:51] 2025-06-04 12:40:51,001 [wrapper] Pilot exit status: 0
[2025-06-04 08:40:51] 2025-06-04 12:40:51,014 [wrapper] pandaids: 6678390189
[2025-06-04 08:40:51] 2025-06-04 12:40:51,099 [wrapper] cleanup supervisor_pilot 2411956 2246880
[2025-06-04 08:40:51] 2025-06-04 12:40:51,103 [wrapper] Test setup, not cleaning
[2025-06-04 08:40:51] 2025-06-04 12:40:51,106 [wrapper] apfmon messages muted
[2025-06-04 08:40:51] 2025-06-04 12:40:51,109 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:40:51] 2025-06-04 12:40:51,112 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:40:51]  *** Error codes and diagnostics ***
[2025-06-04 08:40:51]     "exeErrorCode": 0,
[2025-06-04 08:40:51]     "exeErrorDiag": "",
[2025-06-04 08:40:51]     "pilotErrorCode": 0,
[2025-06-04 08:40:51]     "pilotErrorDiag": "",
[2025-06-04 08:40:51]  *** Listing of results directory ***
[2025-06-04 08:40:51] total 382840
[2025-06-04 08:40:51] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 08:40:51] -rwx------. 1 boincer umatlas     37140 Jun  4 02:46 runpilot2-wrapper.sh
[2025-06-04 08:40:51] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 02:46 queuedata.json
[2025-06-04 08:40:51] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:40:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:41 run_atlas
[2025-06-04 08:40:51] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:41 job.xml
[2025-06-04 08:40:51] -rw-r--r--. 2 boincer umatlas 214248470 Jun  4 07:41 EVNT.45006593._002186.pool.root.1
[2025-06-04 08:40:51] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:41 start_atlas.sh
[2025-06-04 08:40:51] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:41 shared
[2025-06-04 08:40:51] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 07:41 input.tar.gz
[2025-06-04 08:40:51] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:41 boinc_lockfile
[2025-06-04 08:40:51] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 07:41 pandaJob.out
[2025-06-04 08:40:51] -rw-------. 1 boincer umatlas    986812 Jun  4 07:41 agis_schedconf.cvmfs.json
[2025-06-04 08:40:51] -rw-------. 1 boincer umatlas   1598969 Jun  4 07:41 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:40:51] drwx------. 4 boincer umatlas      4096 Jun  4 07:41 pilot3
[2025-06-04 08:40:51] -rw-r--r--. 1 boincer umatlas      6896 Jun  4 08:37 init_data.xml
[2025-06-04 08:40:51] -rw-------. 1 boincer umatlas        95 Jun  4 08:39 pilot_heartbeat.json
[2025-06-04 08:40:51] -rw-------. 1 boincer umatlas 172639825 Jun  4 08:40 HITS.45006595._054640.pool.root.1
[2025-06-04 08:40:51] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:40 boinc_task_state.xml
[2025-06-04 08:40:51] -rw-------. 1 boincer umatlas      1030 Jun  4 08:40 memory_monitor_summary.json
[2025-06-04 08:40:51] -rw-------. 1 boincer umatlas    296857 Jun  4 08:40 log.45006595._054640.job.log.tgz.1
[2025-06-04 08:40:51] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:40 boinc_mmap_file
[2025-06-04 08:40:51] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:40 wrapper_checkpoint.txt
[2025-06-04 08:40:51] -rw-------. 1 boincer umatlas      7683 Jun  4 08:40 heartbeat.json
[2025-06-04 08:40:51] -rw-------. 1 boincer umatlas      4476 Jun  4 08:40 pilotlog.txt
[2025-06-04 08:40:51] -rw-------. 1 boincer umatlas    359219 Jun  4 08:40 log.45006595._054640.job.log.1
[2025-06-04 08:40:51] -rw-------. 1 boincer umatlas       357 Jun  4 08:40 output.list
[2025-06-04 08:40:51] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:40 runtime_log
[2025-06-04 08:40:51] -rw-------. 1 boincer umatlas    675840 Jun  4 08:40 result.tar.gz
[2025-06-04 08:40:51] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 08:40 runtime_log.err
[2025-06-04 08:40:51] -rw-------. 1 boincer umatlas       651 Jun  4 08:40 l5PMDm63wg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxtaKDmXajABn.diag
[2025-06-04 08:40:51] -rw-r--r--. 1 boincer umatlas     21457 Jun  4 08:40 stderr.txt
[2025-06-04 08:40:51] HITS file was successfully produced:
[2025-06-04 08:40:51] -rw-------. 1 boincer umatlas 172639825 Jun  4 08:40 shared/HITS.pool.root.1
[2025-06-04 08:40:51]  *** Contents of shared directory: ***
[2025-06-04 08:40:51] total 379004
[2025-06-04 08:40:51] -rw-r--r--. 2 boincer umatlas 214248470 Jun  4 07:41 ATLAS.root_0
[2025-06-04 08:40:51] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:41 start_atlas.sh
[2025-06-04 08:40:51] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 07:41 input.tar.gz
[2025-06-04 08:40:51] -rw-------. 1 boincer umatlas 172639825 Jun  4 08:40 HITS.pool.root.1
[2025-06-04 08:40:51] -rw-------. 1 boincer umatlas    675840 Jun  4 08:40 result.tar.gz
08:40:52 (2243293): run_atlas exited; CPU time 22927.212598
08:40:52 (2243293): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN